chr1 956563 956812 956665 Y UBE2J2,PUSL1,GLTPD1,DVL1,CPSF3L,C1orf159,AURKAIP1,AURKAIP1,AURKAIP1,ATAD3A,ATAD3A,NOC2L,PLEKHN1,ISG15,AGRN HES4,ISG15,AGRN,RP11-465B22.3 NA NA NA NA AGRN 3060 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 993498 993878 993664 Y NA ISG15,AGRN,RP11-465B22.3,RNF223 NA NA NA NA RP11-465B22.3 384 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 994198 994452 994303 Y NA ISG15,AGRN,RP11-465B22.3,RNF223 NA NA NA NA RP11-465B22.3 1084 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 1004646 1004986 1004766 Y NA RP11-465B22.3,RNF223,C1orf159 NA NA NA NA RNF223 2701 CAGE HCC1806 hg19 FANTOM5 5.41526920953298 chr1 1005293 1005547 1005421 Y HES4 RP11-465B22.3,RNF223,C1orf159 NA NA NA NA RNF223 2140 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 1060905 1061095 1061000 Y RNF223 C1orf159 MIR429,MIR200B,MIR200A,ACAP3,SCNN1D,B3GALT6,SDF4,UBE2J2,C1orf159 MCF7,K562 ChIA-PET 22265404 C1orf159 11164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 1265677 1265980 1265829 Y NA PUSL1,ACAP3,CPSF3L,GLTPD1,DVL1,AURKAIP1 NA NA NA NA GLTPD1 7541 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 1793829 1793862 1793845 Y CDK11B,CDK11A GNB1 NA NA NA NA GNB1 26633 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 1803114 1803303 1803274 Y NA GNB1,TMEM52 NADK IMR90 Hi-C 24141950 GNB1 17192 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 1814762 1815124 1815035 Y SKI,C1orf86,MIB2 GNB1,TMEM52 NA NA NA NA GNB1 5371 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 1840449 1840835 1840668 Y SKI,ATAD3B,C1orf70,MIB2,MIB2,PRKCZ,GABRD GNB1,TMEM52 NA NA NA NA TMEM52 7877 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 2111429 2112079 2111937 Y NA C1orf86 NA NA NA NA C1orf86 30080 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 2140151 2140337 2140252 Y C1orf86 C1orf86 NA NA NA NA C1orf86 1822 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 2477415 2477971 2477660 Y NA PANK4,HES5,TNFRSF14,RP3-395M20.8,FAM213B NA NA NA NA TNFRSF14 7107 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 2509702 2510198 2509855 Y SKI,TNFRSF14 TNFRSF14,RP3-395M20.8,FAM213B NA NA NA NA FAM213B 5732 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 3420761 3421065 3420920 Y NA NA NA NA NA NA ARHGEF16 51771 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 4729528 4729775 4729656 Y AJAP1 AJAP1 NA NA NA NA AJAP1 16736 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 6034742 6034859 6034801 Y NA KCNAB2,NPHP4 NA NA NA NA KCNAB2 14667 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 6053603 6054107 6053839 Y CHD5,KCNAB2,KCNAB2,KCNAB2,KCNAB2 KCNAB2,NPHP4 NA NA NA NA NPHP4 3070 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 6301988 6302384 6302218 Y NA RNF207,RPL22,ICMT,GPR153 NA NA NA NA ICMT 7956 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 6319998 6320272 6320169 Y NA ICMT,GPR153 NA NA NA NA GPR153 963 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 6341896 6342142 6342067 Y GPR153,ACOT7 ICMT,GPR153 NA NA NA NA GPR153 22861 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 7764543 7764931 7764717 Y PER3 NA NA NA NA NA VAMP3 64398 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr1 8137301 8137521 8137361 Y NA NA ERRFI1,PARK7,TNFRSF9,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 52933 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 8156648 8157003 8156918 Y VAMP3 NA ERRFI1,RERE,SLC45A1,PARK7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 72280 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 8445817 8446112 8445964 Y RERE NA NA NA NA NA SLC45A1 69931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 8457012 8457408 8457307 Y NA NA NA NA NA NA SLC45A1 81126 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 8487656 8487917 8487791 Y RERE NA NA NA NA NA SLC45A1 111770 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 8686491 8686867 8686745 Y RERE NA NA NA NA NA RERE 188835 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 8762126 8762475 8762428 Y NA NA NA NA NA NA RERE 113227 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 8810273 8810466 8810370 Y NA NA NA NA NA NA RERE 65236 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 8849339 8849636 8849462 Y NA RERE NA NA NA NA RERE 26066 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 8858188 8858497 8858477 Y NA RERE NA NA NA NA RERE 17205 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 9222919 9223181 9223073 Y SPSB1 GPR157,RP3-510D11.2 SLC2A7,SLC25A33,MIR34A,GPR157 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP3-510D11.2 17082 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 9535183 9535425 9535306 Y NA NA SPSB1,H6PD,SLC25A33,TMEM201 IMR90 Hi-C 24141950 SLC25A33 62116 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 10269964 10270260 10269995 Y RBP7,PGD,KIF1B KIF1B NA NA NA NA KIF1B 1101 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 10496880 10497075 10496978 Y KIF1B PGD,APITD1,APITD1-CORT,PEX14,DFFA NA NA NA NA APITD1,APITD1-CORT 8721 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 10853772 10853865 10853819 Y NA CASZ1 NA NA NA NA CASZ1 842 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 10959985 10960148 10960064 Y NA NA PEX14,CASZ1,C1orf127,TARDBP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CASZ1 105278 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 11376903 11377179 11377126 Y NA UBIAD1 NA NA NA NA UBIAD1 45640 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 11559549 11559947 11559917 Y NA NA NA NA NA NA FBXO44 152485 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 11968510 11969143 11969021 Y MTHFR,CLCN6,VPS13D,MIIP RNU5E-1,KIAA2013,PLOD1 NA NA NA NA RNU5E-1 2301 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 12599928 12600179 12600028 Y DHRS3 NA DHRS3,VPS13D K562 ChIA-PET 22265404 DHRS3 75558 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 12609717 12610039 12609907 Y DHRS3 NA NA NA NA NA DHRS3 65698 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 12674513 12674729 12674684 Y NA DHRS3 NA NA NA NA DHRS3 1008 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 15059594 15059681 15059648 Y KAZN NA NA NA NA NA KAZN 136394 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 15519488 15519688 15519655 Y NA TMEM51 NA NA NA NA TMEM51 42460 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 15666999 15667145 15667070 Y NA NA CTRC,EFHD2 IMR90 Hi-C 24141950 EFHD2 67246 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 15743639 15744318 15744205 Y NA EFHD2 NA NA NA NA EFHD2 9248 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 16175691 16176294 16176100 Y NA RP11-169K16.8,SPEN,RP11-169K16.9 NA NA NA NA RP11-169K16.9 3049 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 16470181 16470602 16470563 Y NA RP11-276H7.2,EPHA2 NA NA NA NA RP11-276H7.2 9104 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 16499761 16499895 16499826 Y SPEN,EPHA2 RP11-276H7.2,EPHA2 CLCNKA,HSPB7,C1orf64,CLCNKB,FAM131C,EPHA2,ARHGEF19,FBXO42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHA2 19179 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 16500084 16500309 16500220 Y NA RP11-276H7.2,EPHA2 CLCNKA,HSPB7,C1orf64,CLCNKB,FAM131C,EPHA2,ARHGEF19,FBXO42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHA2 19502 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 16696032 16696399 16696223 Y NA FBXO42 NA NA NA NA FBXO42 19083 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 16825333 16826291 16825792 Y NA RNU1-1 SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 RNU1-1 12489 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 17027024 17027386 17027173 Y NA EIF1AXP1 NA NA NA NA EIF1AXP1 16474 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 17231253 17231704 17231392 Y PADI4,PADI2 RP11-108M9.4 CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-108M9.4 17109 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr1 17240188 17240783 17240515 Y NA RP11-108M9.4 CROCC K562 ChIA-PET 22265404 RP11-108M9.4 26044 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr1 17518941 17519138 17519054 Y ATP13A2,PADI3 RP11-380J14.1,PADI1 NBPF1,PADI1,PADI2,PADI3 IMR90 Hi-C 24141950 RP11-380J14.1 4663 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 17746173 17746585 17746297 Y NA RCC2 NA NA NA NA RCC2 17635 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 17767804 17768710 17768126 Y NA RCC2 NA NA NA NA RCC2 3584 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr1 19264079 19264209 19264144 Y IFFO2 ALDH4A1,IFFO2 ALDH4A1 IMR90 Hi-C 24141950 IFFO2 16971 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 19324821 19325090 19324988 Y TAS1R2,IFFO2 IFFO2 ALDH4A1,IFFO2,UBR4 IMR90 Hi-C 24141950 IFFO2 43641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 19337577 19337942 19337698 Y NA NA UBR4,IFFO2,ALDH4A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFFO2 56397 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 20164481 20164729 20164566 Y NA TMCO4,OTUD3 RNF186,OTUD3,TMCO4 IMR90 Hi-C 24141950 TMCO4 40043 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 20204786 20204981 20204970 Y OTUD3 OTUD3 NA NA NA NA OTUD3 2025 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 21475659 21476054 21476002 Y EIF4G3,EIF4G3 EIF4G3 NA NA NA NA EIF4G3 25323 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 21476251 21476624 21476546 Y NA EIF4G3 NA NA NA NA EIF4G3 24753 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 21510856 21510968 21510912 Y ECE1,ECE1 EIF4G3 EIF4G3,DDOST,KIF17,HP1BP3,SH2D5 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EIF4G3 9479 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 23076914 23077145 23077061 Y NA EPHB2 NA NA NA NA EPHB2 41582 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 23387479 23387794 23387637 Y ZNF436 KDM1A LUZP1 IMR90 Hi-C 24141950 KDM1A 43538 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 23445594 23445963 23445683 Y NA NA NA NA NA NA LUZP1 56338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 23494015 23494642 23494449 Y NA LUZP1 NA NA NA NA LUZP1 7659 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 23523350 23523682 23523502 Y LUZP1,HTR1D LUZP1 NA NA NA NA LUZP1 21049 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 23778586 23778784 23778678 Y NA TCEA3,ASAP3 NA NA NA NA TCEA3 29353 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 23881180 23881765 23881497 Y NA E2F2,ID3,MDS2 E2F2 IMR90 Hi-C 24141950 ID3 2520 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr1 23888678 23889201 23888997 Y ID3 E2F2,ID3,MDS2 NA NA NA NA ID3 4393 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 24229023 24229388 24229190 Y NA FUCA1,RP11-4M23.4 NA NA NA NA FUCA1 36239 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 24349340 24349488 24349411 Y NA RP11-4M23.7 LYPLA2,SRSF10,MYOM3,PNRC2,SRRM1,HMGCL,IL22RA1,LOC100506963,TCEB3,GALE,FUCA1,CNR2,IL28RA,C1orf201,NIPAL3,RCAN3,RCAN3AS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-4M23.7 16331 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 24519628 24519970 24519647 Y GRHL3 NA MYOM3,IL22RA1,C1orf201,NIPAL3,RCAN3,RCAN3AS,C1orf130 IMR90 Hi-C 24141950 IL22RA1 52017 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 24691833 24692082 24691893 Y PNRC2,GRHL3 GRHL3,NIPAL3 NA NA NA NA GRHL3 48021 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr1 25559638 25560067 25559796 Y RUNX3,SYF2,C1orf63 SYF2 NA NA NA NA SYF2 2645 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 25566195 25566411 25566257 Y TMEM57 SYF2 SYF2 MCF7 ChIA-PET 22265404 SYF2 9202 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 25665993 25666367 25666180 Y RUNX3,FAM54B,C1orf63 TMEM50A,C1orf63 NA NA NA NA C1orf63 3289 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 26249033 26249281 26249192 Y EXTL1,STMN1,STMN1,STMN1 MIR3917,STMN1 STMN1,PAFAH2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STMN1 17551 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 26452850 26453250 26452988 Y FAM54B,RPS6KA1,HMGN2,CEP85,CD52,PDIK1L PDIK1L,ZNF593,CNKSR1 NA NA NA NA PDIK1L 17186 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 26617206 26617304 26617268 Y SH3BGRL3,RPS6KA1,PIGV,ARID1A,UBXN11,UBXN11 SH3BGRL3,UBXN11 NA NA NA NA SH3BGRL3 13539 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 26678060 26678317 26678200 Y CNKSR1,AIM1L UBXN11,AIM1L NA NA NA NA AIM1L 304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 26907862 26908015 26907938 Y SH3BGRL3,UBXN11 NA NA NA NA NA HMGN2 110921 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 27024638 27025138 27024825 Y SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV ARID1A NA NA NA NA ARID1A 4114 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 27175784 27176273 27175984 Y C1orf172,AIM1L,ZNF683,RPS6KA1,SFN ZDHHC18,SFN,GPN2,NUDC,GPATCH3 NA NA NA NA SFN 11360 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 27191386 27191927 27191661 Y FAM46B,C1orf172,HMGN2,RPS6KA1,SFN,NUDC,GPN2 ZDHHC18,SFN,GPN2,NUDC,GPATCH3 NA NA NA NA SFN 3753 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr1 27527451 27527688 27527509 Y NA SLC9A1,WDTC1 WDTC1,SLC9A1,C1orf172 IMR90 Hi-C 24141950 WDTC1 31319 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 27561705 27561803 27561716 Y NA WDTC1 NA NA NA NA WDTC1 2698 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 27691785 27692261 27692091 Y TMEM222,MAP3K6 TMEM222,RP11-4K3__A.5,SYTL1,MAP3K6,CD164L2,GPR3 NA NA NA NA MAP3K6 402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 27848725 27849287 27848935 Y WDTC1,SYTL1,FAM76A WASF2 NA NA NA NA WASF2 34056 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 27907931 27908052 27907995 Y NA AHDC1 NA NA NA NA AHDC1 20890 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 27924204 27924421 27924302 Y XKR8,AHDC1 AHDC1 NA NA NA NA AHDC1 4521 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 27986111 27986384 27986268 Y EYA3,SYTL1,WASF2,XKR8,STX12,FAM76A,C1orf38,FGR,FGR,FGR IFI6 NA NA NA NA IFI6 10345 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 28201800 28202156 28201857 Y SESN2,PTAFR,PTAFR,MED18,EYA3,WASF2,FGR,FGR,FGR,STX12,C1orf38,XKR8 PPP1R8,RPA2 NA NA NA NA RPA2 37101 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 28431716 28431884 28431798 Y FGR,FGR,FGR,STX12,C1orf38,SESN2,PTAFR,PTAFR,EYA3 EYA3 PTAFR,EYA3,FAM76A,LOC653566,DNAJC8,ATPIF1,SESN2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EYA3 18509 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 28462161 28462385 28462304 Y FAM76A,STX12,C1orf38,XKR8,EYA3,SESN2,MED18,PTAFR,PTAFR EYA3 EYA3,LOC653566 IMR90 Hi-C 24141950 EYA3 48954 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 28573636 28574084 28573917 Y NA DNAJC8,ATPIF1,SESN2 NA NA NA NA SESN2 9954 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 28576012 28576248 28576109 Y STX12,C1orf38,EYA3,PTAFR,PTAFR,GMEB1,SESN2,MED18 DNAJC8,ATPIF1,SESN2 NA NA NA NA SESN2 7790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 29517304 29517322 29517313 Y NA SRSF4,MECR,PTPRU NA NA NA NA SRSF4 10805 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 29563709 29564430 29563877 Y PTPRU MECR,PTPRU NA NA NA NA PTPRU 2681 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 29564766 29564995 29564881 Y NA MECR,PTPRU NA NA NA NA PTPRU 3738 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 29565515 29565732 29565598 Y SRSF4,PTPRU MECR,PTPRU NA NA NA NA PTPRU 4487 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 31375562 31375695 31375629 Y NA SDC3 NA NA NA NA SDC3 3913 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 31504221 31504603 31504488 Y NA PUM1 NA NA NA NA PUM1 32235 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 31627566 31627958 31627874 Y SDC3,HCRTR1,NKAIN1 NA SNRNP40,PUM1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 90728 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr1 31628220 31628457 31628359 Y NA NA PUM1,NKAIN1,SERINC2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 91382 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 32421622 32422096 32421696 Y MARCKSL1,PEF1,PTP4A2,PTP4A2,KHDRBS1 PTP4A2 KHDRBS1,SPOCD1,PTP4A2,TINAGL1,COL16A1,PEF1,BAI2,TMEM39B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTP4A2 13165 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr1 33077721 33078012 33077949 Y FNDC5 ZBTB8OS,RBBP4 NA NA NA NA ZBTB8OS 36492 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 33131314 33131452 33131383 Y NA ZBTB8OS,RBBP4,SYNC NA NA NA NA RBBP4 16571 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 33225777 33226084 33225890 Y TMEM54,KIAA1522 KIAA1522 NA NA NA NA KIAA1522 20291 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 33226574 33226719 33226667 Y TMEM54,KIAA1522 KIAA1522 NA NA NA NA KIAA1522 21088 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 33427851 33428169 33427991 Y PHC2,RNF19B RNF19B NA NA NA NA RNF19B 117 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 33829513 33829825 33829684 Y FNDC5,ZSCAN20 NA NA NA NA NA PHC2 64828 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 35891843 35891965 35891904 Y NA NA NA NA NA NA NCDN 129109 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 36103028 36103196 36103152 Y NA PSMB2 TFAP2E IMR90 Hi-C 24141950 PSMB2 2249 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 36431149 36431388 36431272 Y STK40,EIF2C4,EIF2C1,EIF2C3 NA NA NA NA NA ADPRHL2 121088 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 36616485 36616868 36616577 Y STK40,SH3D21,CSF3R,EIF2C4,EIF2C1,EIF2C3,MAP7D1 COL8A2,TRAPPC3,MAP7D1 NA NA NA NA MAP7D1 2312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 36849527 36849580 36849557 Y EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,CSF3R STK40,LSM10 NA NA NA NA STK40 30 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 37942874 37943354 37943027 Y YRDC,SNIP1,MTF1,ZC3H12A LINC01137,ZC3H12A,MEAF6 NA NA NA NA ZC3H12A 4721 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 38009784 38010404 38010149 Y SNIP1,MTF1,ZC3H12A MEAF6,SNIP1,GNL2 MEAF6 IMR90 Hi-C 24141950 SNIP1 7499 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 38010731 38010979 38010768 Y ZC3H12A,MTF1 MEAF6,SNIP1,GNL2 MEAF6 IMR90 Hi-C 24141950 SNIP1 6924 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 38285621 38285821 38285720 Y ZC3H12A,MTF1 MANEAL,C1orf122,YRDC,MTF1 NA NA NA NA YRDC 13764 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 40005546 40005959 40005647 Y NA PABPC4 NA NA NA NA PABPC4 34503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 40264988 40265120 40265045 Y NA BMP8B HEYL,PPIE,BMP8B,MFSD2A,MACF1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 BMP8B 12455 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 40561233 40561752 40561648 Y SMAP2,RLF NA NA NA NA NA PPT1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 41365158 41365531 41365407 Y NA CITED4 CITED4,CTPS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CITED4 39140 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 41495531 41495820 41495676 Y NA NA NA NA NA NA CITED4 169513 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 41501440 41501773 41501639 Y NA NA NA NA NA NA CITED4 175422 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 41564044 41564297 41564171 Y NA NA NA NA NA NA SCMH1 141529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 41823971 41824199 41824094 Y NA FOXO6 NA NA NA NA FOXO6 1395 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 41826642 41826952 41826745 Y NA FOXO6 NA NA NA NA FOXO6 1048 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 42354251 42354647 42354385 Y RIMKLA,HIVEP3 NA NA NA NA NA HIVEP3 144949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 43388597 43388971 43388887 Y NA SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1 33559 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 43389220 43390772 43390027 Y NA SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1 31758 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 43405621 43405821 43405630 Y CCDC30,CCDC23,ERMAP,SZT2,SLC2A1 SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1 16709 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 43406108 43407009 43406836 Y YBX1,ERMAP,SZT2 SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1 15521 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 43426742 43427095 43427089 Y CLDN19,SLC2A1 SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1-AS1 4022 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 44015731 44016125 44016031 Y CCDC24,WDR65,C1orf210,C1orf210,PTPRF PTPRF NA NA NA NA PTPRF 26873 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 44341126 44341302 44341213 Y NA NA NA NA NA NA ARTN 55690 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 44380893 44381202 44381004 Y SLC6A9,B4GALT2,ARTN ARTN,RP11-7O11.3,IPO13 NA NA NA NA ARTN 15790 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 44430681 44431060 44430788 Y NA ARTN,RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24 NA NA NA NA DPH2 2612 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 44452990 44453115 44453039 Y NA RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24,SLC6A9 NA NA NA NA CCDC24 1916 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 45085192 45085548 45085380 Y NA NA C1orf228,TMEM53 IMR90 Hi-C 24141950 TMEM53 52679 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 45192729 45193123 45192925 Y NA RNU5F-1,RNU5D-1,KIF2C,RPS8,SNORD55 KIF2C IMR90 Hi-C 24141950 RNU5D-1 1719 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 45746932 45746947 45746939 Y NA HPDL ZSWIM5,UROD,HECTD3 IMR90 Hi-C 24141950 HPDL 43598 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 45990749 45991039 45990946 Y NA TESK2,MMACHC,CCDC163P,PRDX1,AKR1A1 NA NA NA NA PRDX1 4030 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 46102450 46102810 46102714 Y NA RP11-767N6.2,TMEM69,GPBP1L1 NA NA NA NA RP11-767N6.2 12688 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 46351629 46351956 46351793 Y C1orf190 NA NA NA NA NA MAST2 100970 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 46689426 46689696 46689549 Y FAAH,C1orf190 PIK3R3,POMGNT1,RAD54L NA NA NA NA POMGNT1 5449 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 46955737 46955918 46955906 Y DMBX1 NA FAAH,DMBX1,MKNK1 IMR90 Hi-C 24141950 FAAH 97800 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 51261727 51261870 51261800 Y NA NA NA NA NA NA FAF1 162065 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 53092647 53093031 53092839 Y NA GPX7 NA NA NA NA GPX7 26603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 53168640 53169047 53168726 Y NA ZYG11B SELRC1 MCF7,K562 ChIA-PET 22265404 ZYG11B 21079 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 53702100 53702340 53702220 Y NA CPT2,C1orf123 NA NA NA NA MAGOH 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 54286238 54286401 54286368 Y NA NA NA NA NA NA YIPF1 68006 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 54441729 54442008 54441915 Y NA HSPB11,LRRC42 NA NA NA NA LRRC42 31979 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 54940444 54940824 54940607 Y NA NA TMEM59,TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP3 63292 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 54953784 54954325 54954090 Y SSBP3,SSBP3 NA TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP3 76632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 56972242 56972492 56972299 Y NA NA NA NA NA NA PPAP2B 136482 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 57024882 57025247 57025166 Y NA NA NA NA NA NA PPAP2B 83727 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 59039624 59039692 59039640 Y NA DAB1,OMA1,TACSTD2 NA NA NA NA TACSTD2 1474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 59050239 59050578 59050488 Y NA DAB1,OMA1,TACSTD2 MYSM1,FGGY,OMA1 IMR90 Hi-C 24141950 TACSTD2 9073 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 59083966 59084335 59084186 Y NA TACSTD2 TACSTD2,OMA1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TACSTD2 42800 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 59280773 59281281 59281052 Y FGGY,JUN JUN NA NA NA NA JUN 32988 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 59369049 59370138 59369602 Y FGGY NA NA NA NA NA RP4-794H19.4 113921 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 59608045 59608421 59608204 Y NA NA NA NA NA NA RP4-794H19.4 123986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 60015651 60015887 60015758 Y FGGY NA NA NA NA NA FGGY 255341 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 60157078 60157331 60157204 Y NA NA NA NA NA NA HOOK1 121127 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 61549054 61549253 61549232 Y NA NA NA NA NA NA NFIA 220123 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 61918819 61919182 61919004 Y NFIA,NFIA,NFIA NA NA NA NA NA TM2D1 269913 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 62119868 62120084 62119981 Y NA NA TM2D1,INADL IMR90 Hi-C 24141950 TM2D1 69011 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 62208815 62209373 62208933 Y NA TM2D1,INADL NA NA NA NA INADL 2666 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 62609116 62609459 62609128 Y NA NA NA NA NA NA KANK4 173626 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 62928310 62928608 62928459 Y KANK4,USP1,USP1,ATG4C USP1 NA NA NA NA USP1 28342 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 65383044 65383557 65383225 Y JAK1 JAK1 NA NA NA NA JAK1 46630 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 65891768 65892129 65891951 Y NA LEPR,LEPROT NA NA NA NA LEPROT 7498 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 66850101 66850481 66850273 Y PDE4B NA NA NA NA NA TCTEX1D1 365661 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 67029191 67029437 67029359 Y NA NA NA NA NA NA TCTEX1D1 186705 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 67883059 67883215 67883204 Y NA SERBP1 NA NA NA NA SERBP1 10883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 68036173 68036524 68036291 Y NA NA GADD45A,GNG12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GADD45A 112220 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 68234822 68235039 68234951 Y NA NA NA NA NA NA GNG12 62111 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 68663588 68663867 68663728 Y NA WLS NA NA NA NA WLS 32936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 68844043 68844242 68844143 Y NA NA LOC100289178,WLS,GNG12,RPE65 IMR90 Hi-C 24141950 DEPDC1 116662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 68961350 68961555 68961472 Y NA DEPDC1 NA NA NA NA DEPDC1 446 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 70017370 70017628 70017440 Y NA NA NA NA NA NA LRRC40 651675 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 70691921 70692281 70691982 Y ANKRD13C,LRRC40,SRSF11 LRRC40,SRSF11 NA NA NA NA SRSF11 22556 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 70745994 70746088 70746040 Y NA NA NA NA NA NA ANKRD13C 72329 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 73859450 73859778 73859467 Y NA NA NA NA NA NA LRRIQ3 802093 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 76645391 76645540 76645467 Y NA NA NA NA NA NA SNORD45A 393817 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 78348123 78348428 78348274 Y ZZZ3,FAM73A NA NA NA NA NA FUBP1 94366 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 78557346 78557710 78557476 Y NA NA NA NA NA NA GIPC2 114120 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 79215772 79216132 79215819 Y NA NA NA NA NA NA IFI44 102291 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 85038681 85038996 85038864 Y MCOLN2,GNG5,CTBS CTBS NA NA NA NA CTBS 518 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 85049005 85049203 85049109 Y NA CTBS RPF1,GNG5 IMR90 Hi-C 24141950 CTBS 10842 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 85643319 85643587 85643547 Y NA SYDE2 MIR4423 IMR90 Hi-C 24141950 SYDE2 21142 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 85667688 85667915 85667906 Y NA SYDE2 NA NA NA NA SYDE2 2959 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 87239429 87239698 87239491 Y NA NA HS2ST1,SEP15,SH3GLB1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SH3GLB1 71170 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 89466934 89467175 89467138 Y GTF2B,GBP2,GBP3 CCBL2,RBMXL1,GBP3 NA NA NA NA RBMXL1 10291 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 89595596 89595852 89595818 Y GTF2B,GBP3,GBP5,GBP4,GBP1,GBP2 GBP2 NA NA NA NA GBP2 18287 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 90167657 90167773 90167712 Y NA NA NA NA NA NA LRRC8C 71026 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 90274070 90274340 90274210 Y NA LRRC8D GEMIN8P4,ZNF326,LRRC8D IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC8D 10233 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 90376424 90376756 90376561 Y LRRC8D,LRRC8D,ZNF326 NA NA NA NA NA GEMIN8P4 81124 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 91154949 91155305 91155127 Y NA NA NA NA NA NA RP4-665J23.1 159902 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 92184014 92184251 92184134 Y NA NA NA NA NA NA TGFBR3 185641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 92218581 92218971 92218958 Y NA NA NA NA NA NA TGFBR3 150921 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 92270160 92270686 92270504 Y RPAP2,GLMN NA NA NA NA NA TGFBR3 99206 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 92907492 92907607 92907552 Y NA NA NA NA NA NA GLMN 144948 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 93427945 93428408 93428079 Y MTF2,DR1,FAM69A FAM69A NA NA NA NA FAM69A 2888 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 94158601 94159338 94158654 Y GCLM,DNTTIP2,BCAR3 NA BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-488P3.1 79662 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr1 94167175 94167520 94167394 Y BCAR3 NA BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-488P3.1 71480 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 95007995 95008302 95008221 Y NA F3 NA NA NA NA F3 2639 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 95267524 95267667 95267664 Y NA LINC01057,SLC44A3 F3,ABCD3,ABCA4,CNN3,LOC729970,ALG14,SLC44A3 IMR90 Hi-C 24141950 LINC01057 16170 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 97679239 97679556 97679405 Y NA NA NA NA NA NA SEC63P1 329701 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 98011760 98012364 98012119 Y NA SEC63P1 NA NA NA NA SEC63P1 2503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 98518546 98518920 98518639 Y NA NA NA NA NA NA DPYD 133941 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 98642709 98642844 98642773 Y NA RP5-1070A16.1 NA NA NA NA RP5-1070A16.1 31459 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 100113534 100114036 100113879 Y AGL,PALMD PALMD NA NA NA NA PALMD 4035 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 100512510 100512716 100512572 Y HIAT1 HIAT1 NA NA NA NA HIAT1 10857 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 100555117 100555459 100555393 Y NA SASS6 NA NA NA NA SASS6 41052 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 100858865 100858991 100858930 Y SLC35A3,HIAT1,CDC14A NA NA NA NA NA CDC14A 50281 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 101202267 101202571 101202418 Y NA NA NA NA NA NA EXTL2 156983 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 105911296 105911317 105911307 Y NA NA NA NA NA NA RP11-364B6.2 1297664 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 108673419 108673672 108673564 Y FAM102B NA NA NA NA NA SLC25A24 67799 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 108741685 108742156 108741931 Y FAM102B SLC25A24 NA NA NA NA SLC25A24 214 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 108870455 108870699 108870577 Y NA NA SLC25A24 MCF7 ChIA-PET 22265404 SLC25A24 128984 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 109133637 109134097 109133761 Y TMEM167B,STXBP3,PRPF38B,FAM102B FAM102B NA NA NA NA FAM102B 32926 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 109159407 109159722 109159520 Y NA HENMT1 NA NA NA NA HENMT1 42426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 109467804 109468470 109468110 Y GPSM2,WDR47,SORT1,SORT1,PSRC1,CELSR2,CLCC1 AKNAD1,CLCC1 NA NA NA NA AKNAD1 35636 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 109469350 109469540 109469522 Y NA AKNAD1,CLCC1 NA NA NA NA AKNAD1 34566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 109572587 109572654 109572620 Y NA WDR47,TAF13 NA NA NA NA WDR47 10196 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 109841804 109842152 109841978 Y SORT1 PSRC1 NA NA NA NA PSRC1 17996 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 110320163 110320291 110320225 Y NA GSTM3 CSF1,AHCYL1,CYB561D1,ATXN7L2,GPR61,GNAI3,AMIGO1,AMPD2,GNAT2,GSTM4,GSTM5,EPS8L3,FAM40A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GSTM3 37779 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 110947330 110947681 110947535 Y NA LAMTOR5-AS1 NA NA NA NA LAMTOR5-AS1 23889 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 113394964 113395159 113395070 Y NA RP3-522D1.1 FAM19A3,PPM1J IMR90 Hi-C 24141950 RP3-522D1.1 4314 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr1 113932415 113932748 113932683 Y NA MAGI3 NA NA NA NA MAGI3 1044 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 114236415 114236760 114236542 Y MAGI3 NA NA NA NA NA PHTF1 63351 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 114244987 114245321 114245197 Y NA NA NA NA NA NA PHTF1 54790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 115605190 115605611 115605404 Y BCAS2,SIKE1 TSPAN2,RP4-666F24.3 NA NA NA NA TSPAN2 24510 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 115873164 115873576 115873409 Y NGF NGF NA NA NA NA NGF 5281 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 116039640 116039989 116039911 Y NA NA NGF,TSPAN2 IMR90 Hi-C 24141950 VANGL1 142585 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 116088478 116088732 116088606 Y NA NA NGF,VANGL1,SYCP1 IMR90 Hi-C 24141950 VANGL1 93842 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 116291091 116291334 116291215 Y CASQ2 NA NA NA NA NA VANGL1 108517 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 116878887 116879201 116879105 Y ATP1A1 ATP1A1 ATP1A1 MCF7 ChIA-PET 22265404 ATP1A1 34089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 116920378 116921129 116920740 Y SLC22A15,ATP1A1,ATP1A1,CD58,ATP1A1 ATP1A1,ATP1A1OS NA NA NA NA ATP1A1 7088 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 117051576 117051921 117051802 Y CD101,ATP1A1,ATP1A1,CD58 NA NA NA NA NA CD58 59740 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 117081238 117081452 117081381 Y CD101,ATP1A1,ATP1A1,ATP1A1,CD58 CD58 NA NA NA NA CD58 30209 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 117347522 117347641 117347587 Y CD2 NA NA NA NA NA PTGFRN 103038 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 117619913 117620299 117620136 Y CD101 RP11-27K13.3,TTF2,TRIM45 NA NA NA NA TTF2 18988 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 118153815 118153988 118153913 Y FAM46C FAM46C NA NA NA NA FAM46C 7259 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 144533627 144534178 144533764 Y PDE4DIP RNU1-59P PDE4DIP,SEC22B,NOTCH2NL,HIST2H2AB,HIST2H2AC,HIST2H2BE K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNU1-59P 1589 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 145004446 145004804 145004625 Y NA NA NA NA NA NA RNU2-38P 61774 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 145396760 145397198 145397044 Y NA RP11-458D21.1,RNVU1-6,TXNIP LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNVU1-6 16003 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 145455122 145455741 145455465 Y PDE4DIP,PDE4DIP,SEC22B,NOTCH2NL,NBPF10,CD160,TXNIP TXNIP,POLR3GL,ANKRD34A,LIX1L,RBM8A NA NA NA NA POLR3GL 12647 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 145519496 145519624 145519499 Y NBPF10,TXNIP LIX1L,RBM8A,RP11-315I20.1,GNRHR2,PEX11B NA NA NA NA PEX11B 5244 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 146999335 146999532 146999436 Y NA BCL9 BCL9 IMR90 Hi-C 24141950 BCL9 11650 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 147080043 147080251 147080097 Y PRKAB2,CHD1L,BCL9 NA NA NA NA NA ACP6 60367 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 147806841 147807184 147807140 Y NA RNU1-122P NA NA NA NA RNU1-122P 1955 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr1 148000699 148000802 148000795 Y NA RNVU1-13 NA NA NA NA RNVU1-13 8553 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 149816287 149817606 149817166 Y NA HIST2H2BF,HIST2H4A,HIST2H2AA3,HIST2H2AA4,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB NA NA NA NA HIST2H2AA4 3037 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 149910900 149911536 149911461 Y NA SV2A,SF3B4 NA NA NA NA SF3B4 12664 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 151168916 151169086 151168995 Y NA SCNM1,LYSMD1,VPS72,PIP5K1A NA NA NA NA PIP5K1A 491 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 151418157 151418544 151418397 Y NA PSMB4,POGZ NA NA NA NA POGZ 11397 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 151445792 151446161 151446000 Y C1orf56,RIIAD1,OAZ3 POGZ,CGN RIIAD1,LOC100132111,TUFT1,CGN,SNX27,POGZ,PI4KB,PSMB4,CELF3,OAZ3,TDRKH,MRPL9,RORC,C2CD4D IMR90,MCF7,HELA,H1ESC,K562 Hi-C,ChIA-PET,5C 24141950,22265404,22955621 POGZ 15851 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 151485676 151485841 151485746 Y C2CD4D,CGN,TUFT1 CGN,SNORA44,TUFT1 NA NA NA NA CGN 4690 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 151913815 151914271 151914054 Y S100A10 THEM4 S100A10,CELF3,THEM4,RORC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THEM4 33531 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 151918166 151918684 151918434 Y NA THEM4,S100A10 S100A10,CELF3,THEM4,RORC,S100A11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THEM4 37882 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 151960875 151961433 151961102 Y S100A11,S100A10 S100A10 NA NA NA NA S100A10 3433 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 152140379 152140745 152140485 Y NA FLG-AS1 NA NA NA NA FLG-AS1 1778 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 152878925 152879083 152878954 Y NA NA NA NA NA NA IVL 0 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 153285394 153285679 153285564 Y NA PGLYRP4,S100A9 NA NA NA NA PGLYRP4 33637 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 153504746 153504953 153504860 Y PGLYRP3,S100A7L2,SLC39A1 BX470102.3,S100A6,S100A5,S100A4,S100A2 NA NA NA NA BX470102.3 667 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 153505144 153505346 153505245 Y NA BX470102.3,S100A6,S100A5,S100A4,S100A2 NA NA NA NA BX470102.3 1065 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 153584539 153584862 153584750 Y NA S100A2,S100A16,S100A14,CHTOP,S100A13,SNAPIN NA NA NA NA S100A16 918 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 153845025 153845089 153845058 Y NA GATAD2B NA NA NA NA GATAD2B 48362 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 153936554 153936861 153936642 Y UBAP2L,HAX1,S100A16,SNAPIN,ILF2,JTB,CREB3L4 GATAD2B,CRTC2,CREB3L4,SLC39A1,JTB,RAB13,RPS27,RP11-422P24.9 NA NA NA NA CREB3L4 1149 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr1 154973335 154973935 154973656 Y ADAR,ADAR,MTX1,SHC1,ZBTB7B PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15 NA NA NA NA ZBTB7B 208 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 155064132 155064186 155064153 Y NA ADAM15,EFNA4,EFNA3,EFNA1,SLC50A1,DPM3 NA NA NA NA EFNA3 29908 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 155283531 155283932 155283776 Y DCST1,EFNA1 HCN3,CLK2,FDPS,RUSC1 NA NA NA NA RUSC1 4755 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 155620238 155620623 155620432 Y NA DAP3,YY1AP1 NA NA NA NA DAP3 35128 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 156073854 156074351 156074085 Y MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,LMNA RAB25,MEX3A,LMNA LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3,MEX3A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNA 23490 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 156095033 156095181 156095051 Y MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,RIT1,ARHGEF2,ARHGEF2,LMNA MEX3A,LMNA NA NA NA NA LMNA 44669 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 156474686 156475018 156474923 Y SLC25A44,PMF1,RRNAD1,MEF2D MEF2D NA NA NA NA MEF2D 6066 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 156480721 156480806 156480764 Y NA MEF2D NA NA NA NA MEF2D 12101 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 156718467 156719136 156718868 Y C1orf182,MEF2D,ETV3,ETV3,RRNAD1 CRABP2,RRNAD1,ISG20L2,MRPL24,PRCC,HDGF NA NA NA NA PRCC 65 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 156966343 156966626 156966486 Y NA ARHGEF11 NA NA NA NA ARHGEF11 46536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 158146699 158147069 158146946 Y NA NA NA NA NA NA KIRREL 185636 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 158147244 158147839 158147743 Y NA NA NA NA NA NA KIRREL 186181 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 159886226 159886307 159886250 Y NA CCDC19,TAGLN2,IGSF9,SLAMF9,LINC01133 NA NA NA NA TAGLN2 7215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 159961374 159961617 159961522 Y SLAMF8,SLAMF9 IGSF9,SLAMF9,LINC01133,PIGM NA NA NA NA LINC01133 32366 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 160377718 160378261 160377994 Y IGSF9 VANGL2 NA NA NA NA VANGL2 9342 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 160696081 160696317 160696161 Y CD48,FCER1G,CD244,SLAMF7 NA NA NA NA NA RP11-312J18.5 166453 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr1 160989381 160990254 160990012 Y NDUFS2,ADAMTS4,F11R F11R,TSTD1,USF1 NA NA NA NA F11R 243 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 161359666 161360218 161359899 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 77619 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 161360317 161360802 161360606 Y NA NA NR1I3,APOA2,TOMM40L,NDUFS2,ADAMTS4,SDHC,UFC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 78270 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 161369073 161369991 161369486 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 87026 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 161500608 161500899 161500816 Y USF1,ARHGAP30,FCER1G,FCGR2A,ATF6,HSPA6,FCGR3B,FCGR3A,FCGR3A NA NA NA NA NA DUSP12 216649 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 161847357 161847565 161847361 Y NA NA NA NA NA NA ATF6 113273 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 162370681 162370944 162370765 Y SH2D1B NA NA NA NA NA UHMK1 94097 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 162539981 162540420 162539994 Y C1orf226,UHMK1,HSD17B7,UAP1 UAP1 NA NA NA NA UAP1 10658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 162937771 162938014 162937902 Y C1orf110 NA RGS4,RGS5,C1orf110 IMR90 Hi-C 24141950 C1orf110 101166 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 164580985 164581415 164581219 Y NA NA NA NA NA NA PBX1 58164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 165823413 165823808 165823568 Y NA UCK2,TMCO1 NA NA NA NA TMCO1 28421 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 166102836 166102913 166102873 Y NA NA NA NA NA NA RP11-9L18.2 141921 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 167160035 167160234 167160135 Y NA RP11-277B15.1,POU2F1 CD247,DUSP27 IMR90 Hi-C 24141950 POU2F1 27832 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 167191021 167191933 167191618 Y NA POU2F1 NA NA NA NA POU2F1 2955 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 167192959 167193266 167193111 Y NA POU2F1 NA NA NA NA POU2F1 4893 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 167322904 167323093 167323001 Y NA NA NA NA NA NA POU2F1 134838 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 167683554 167683813 167683605 Y POU2F1,CREG1 MPZL1 NA NA NA NA MPZL1 4616 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 168409627 168409736 168409651 Y NA NA F5 IMR90 Hi-C 24141950 TBX19 161349 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 172468818 172469289 172468991 Y NA NA DNM3,DARS2,CENPL,C1orf9,C1orf105,FASLG IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIGC 57588 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 173909740 173909938 173909924 Y RC3H1,ZBTB37 NA NA NA NA NA GAS5 73720 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 174122877 174123205 174123041 Y NA RABGAP1L NA NA NA NA RABGAP1L 3343 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 174503176 174503233 174503205 Y NA NA NA NA NA NA RABGAP1L 376628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 174788416 174788807 174788447 Y NA NA NA NA NA NA CACYBP 177493 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 175145439 175145838 175145619 Y KIAA0040,KIAA0040 KIAA0040 NA NA NA NA KIAA0040 14297 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 175160901 175161109 175161018 Y KIAA0040,KIAA0040 KIAA0040 NA NA NA NA KIAA0040 766 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 178305054 178305336 178305195 Y RASAL2 NA NA NA NA NA C1orf220 204551 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 178903778 178903964 178903860 Y NA NA NA NA NA NA FAM20B 88975 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 179153644 179153909 179153868 Y NA ABL2 NA NA NA NA ABL2 42910 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 179290775 179290979 179290800 Y NA SOAT1 NA NA NA NA SOAT1 29850 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 180250812 180250948 180250921 Y NA NA NA NA NA NA QSOX1 128843 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 180389473 180389640 180389557 Y NA NA LHX4,LOC100527964 IMR90 Hi-C 24141950 ACBD6 80449 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 180554738 180554883 180554800 Y MR1 XPR1 XPR1,ACBD6 IMR90 Hi-C 24141950 XPR1 44257 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 181068595 181069000 181068732 Y NA IER5 NA NA NA NA IER5 12957 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr1 181104265 181104352 181104277 Y NA IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 48627 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 181104473 181105818 181105427 Y STX6,MR1,IER5 IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 48835 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 182259351 182259676 182259514 Y NA NA GLUL K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 GLUL 99665 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 182682922 182683008 182682965 Y DHX9 NA RGS8,RNASEL IMR90 Hi-C 24141950 NPL 73420 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 182998797 182999044 182998924 Y NA LAMC1 NA NA NA NA LAMC1 8202 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 183166871 183167293 183166889 Y NA LAMC2 NA NA NA NA LAMC2 13498 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 183951471 183951644 183951558 Y NCF2,NCF2 NA NA NA NA NA TSEN15 67167 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 184810330 184810429 184810414 Y NA NA NA NA NA NA EDEM3 88283 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 186943840 186944382 186944105 Y PTGS2,PLA2G4A NA NA NA NA NA PLA2G4A 147755 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 186947742 186948198 186947923 Y PTGS2,PLA2G4A NA NA NA NA NA PLA2G4A 151657 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 192783033 192783090 192783086 Y TROVE2,TROVE2,CDC73,RGS2 RGS2 NA NA NA NA RGS2 6864 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 193180704 193180924 193180776 Y NA NA NA NA NA NA CDC73 91557 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 194828218 194828283 194828245 Y NA NA NA NA NA NA CDC73 1739071 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 197964894 197965254 197965077 Y NA NA NA NA NA NA LHX9 85857 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 198128112 198128944 198128293 Y PTPRC,DENND1B NEK7 NA NA NA NA NEK7 4019 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 198650930 198651643 198651116 Y PTPRC NA NA NA NA NA NEK7 526837 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 199019703 199019754 199019729 Y NA NA LOC100131234 IMR90 Hi-C 24141950 NEK7 895610 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 200783735 200784105 200783920 Y NA NA NA NA NA NA C1orf106 74071 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 200831452 200831819 200831500 Y NA C1orf106 NA NA NA NA C1orf106 26357 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 200862818 200862950 200862864 Y NA C1orf106 NA NA NA NA C1orf106 4642 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201236006 201236165 201236054 Y LAD1,C1orf106,PKP1 PKP1 NA NA NA NA PKP1 14415 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201277004 201277220 201277102 Y NA PKP1 NA NA NA NA PKP1 26424 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201277329 201277484 201277406 Y PKP1 PKP1 NA NA NA NA PKP1 26749 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 201280694 201280963 201280829 Y LAD1,C1orf106,PKP1 PKP1 NA NA NA NA PKP1 30114 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201295169 201295564 201295367 Y PKP1 PKP1 NA NA NA NA PKP1 44589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201424936 201425126 201425034 Y NA PHLDA3,RP11-134G8.7 NA NA NA NA PHLDA3 11239 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201449602 201449822 201449716 Y LAD1 PHLDA3,RP11-134G8.7,CSRP1 PHLDA3 IMR90 Hi-C 24141950 PHLDA3 13237 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 201717986 201718364 201718179 Y NA NA IPO9 IMR90 Hi-C 24141950 IPO9 77905 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 202781525 202781905 202781812 Y NA RP11-480I12.2,KDM5B,PCAT6,RP11-480I12.5 NA NA NA NA PCAT6 3443 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 202872285 202872308 202872297 Y NA RP11-480I12.5,RABIF,HNRNPA1P59,KLHL12 RABIF MCF7 ChIA-PET 22265404 HNRNPA1P59 6632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 202997835 202998093 202998001 Y NA TMEM183A,PPFIA4 NA NA NA NA PPFIA4 4209 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 203101073 203101246 203101163 Y NA ADORA1 NA NA NA NA ADORA1 43291 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 203259429 203259985 203259729 Y RABIF,KLHL12,ADIPOR1,ADIPOR1,BTG2 BTG2 NA NA NA NA BTG2 12634 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 203296328 203297068 203296686 Y LAX1,RABIF,TMEM183A,TMEM183B,BTG2 BTG2 NA NA NA NA BTG2 23709 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 203481982 203482534 203482093 Y BTG2,ATP2B4 NA NA NA NA NA ATP2B4 111155 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 203506114 203506504 203506389 Y NA NA NA NA NA NA ATP2B4 87185 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 204238647 204239007 204238820 Y GOLT1A,PLEKHA6 NA NA NA NA NA GOLT1A 57427 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 204332438 204332553 204332500 Y SOX13,PPP1R15B PPP1R15B NA NA NA NA PPP1R15B 46366 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 204386444 204387188 204386898 Y PPP1R15B PPP1R15B NA NA NA NA PPP1R15B 7525 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 204389721 204389989 204389958 Y PPP1R15B PPP1R15B NA NA NA NA PPP1R15B 10802 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 205090261 205090406 205090392 Y NA RBBP5 CNTN2 IMR90 Hi-C 24141950 RBBP5 1118 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 205144631 205144860 205144785 Y NA DSTYK NA NA NA NA DSTYK 33867 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 205227547 205227721 205227634 Y TMEM81 DSTYK,TMCC2 NA NA NA NA TMCC2 32243 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 205267691 205267999 205267801 Y NA NUAK2 NA NA NA NA NUAK2 20884 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 206751685 206751882 206751743 Y IKBKE,RASSF5,IL19,MAPKAPK2,FAIM3,FAIM3,RASSF5 EIF2D NA NA NA NA EIF2D 32022 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 206752030 206752370 206752201 Y RASSF5,MAPKAPK2,RASSF5 EIF2D NA NA NA NA EIF2D 31534 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 206832398 206832801 206832527 Y DYRK3 EIF2D,DYRK3,MAPKAPK2 NA NA NA NA MAPKAPK2 23488 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 206859136 206859493 206859328 Y IKBKE,RASSF5,RASSF5,MAPKAPK2 MAPKAPK2 NA NA NA NA MAPKAPK2 2847 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 206892674 206892943 206892811 Y NA MAPKAPK2 NA NA NA NA MAPKAPK2 36385 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 206918122 206918360 206918230 Y IKBKE,RASSF5,RASSF5,DYRK3,IL19,MAPKAPK2 NA NA NA NA NA MAPKAPK2 61833 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 206926556 206926809 206926654 Y IKBKE,RASSF5,RASSF5,DYRK3,IL19,MAPKAPK2 NA NA NA NA NA MAPKAPK2 70267 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 207064076 207064429 207064213 Y NA RP11-564A8.4 NA NA NA NA RP11-564A8.4 14535 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 207203424 207203586 207203506 Y C1orf116 C1orf116,PFKFB2,YOD1 NA NA NA NA C1orf116 515 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 208267767 208267971 208267827 Y NA NA NA NA NA NA PLXNA2 147694 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209528830 209529176 209528970 Y LAMB3,LAMB3,IRF6,LOC642587 NA MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 70989 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr1 209538127 209538433 209538258 Y LAMB3,LAMB3,IRF6,LOC642587 NA MIR205HG MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 MIR205HG 61732 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209556903 209557123 209556922 Y LAMB3,LAMB3,IRF6,LOC642587 MIR205HG MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 43042 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 209571959 209572357 209572220 Y LAMB3 MIR205HG MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 27808 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 209577571 209577627 209577601 Y LAMB3,LAMB3,IRF6,LOC642587 MIR205HG NA NA NA NA MIR205HG 22538 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209590107 209590333 209590233 Y LAMB3,LAMB3,IRF6,LOC642587 MIR205HG MIR205HG IMR90 Hi-C 24141950 MIR205HG 9832 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209600780 209600928 209600808 Y NA MIR205HG NA NA NA NA MIR205HG 615 CAGE HCC1806 hg19 FANTOM5 4.47348326004898 chr1 209601291 209601611 209601405 Y NA MIR205HG NA NA NA NA MIR205HG 1126 CAGE HCC1806 hg19 FANTOM5 15.5394681664859 chr1 209766433 209766919 209766698 Y CAMK1G RP1-272L16.1 NA NA NA NA RP1-272L16.1 27415 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 209783856 209783983 209783869 Y NA RP1-272L16.1,LAMB3 NA NA NA NA LAMB3 39828 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209798058 209798744 209798639 Y NA LAMB3,G0S2 NA NA NA NA LAMB3 25067 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209806744 209806957 209806914 Y G0S2,LAMB3 LAMB3,G0S2 NA NA NA NA LAMB3 16854 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 209827285 209827712 209827546 Y LOC642587,IRF6,HSD11B1,LAMB3,LAMB3 LAMB3,G0S2 NA NA NA NA LAMB3 3474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209829183 209829498 209829302 Y IRF6,G0S2,LAMB3,LAMB3,LAMB3 LAMB3,G0S2 NA NA NA NA LAMB3 5372 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 209831470 209831550 209831510 Y TRAF3IP3,G0S2,LAMB3,LAMB3,LAMB3 LAMB3,G0S2 NA NA NA NA LAMB3 7659 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209938931 209939742 209939534 Y LAMB3,G0S2,TRAF3IP3,C1orf74 RP1-28O10.1,C1orf74,IRF6 NA NA NA NA C1orf74 16162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 209942657 209943400 209942924 Y LAMB3,G0S2,TRAF3IP3 RP1-28O10.1,C1orf74,IRF6 NA NA NA NA C1orf74 12504 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 211780151 211780642 211780410 Y NA SLC30A1 SLC30A1 K562 ChIA-PET 22265404 SLC30A1 30067 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 211837893 211837920 211837910 Y NA NEK2 NA NA NA NA NEK2 9040 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 211950086 211950249 211950170 Y NA NA NA NA NA NA LPGAT1 51865 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 211988342 211989080 211989063 Y PPP2R5A,PPP2R5A,LPGAT1 LPGAT1 NA NA NA NA LPGAT1 13034 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 211998326 211998558 211998442 Y NA LPGAT1 NA NA NA NA LPGAT1 3556 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 212291571 212291809 212291658 Y PPP2R5A NA NA NA NA NA RPL21P28 68200 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 212458080 212458253 212458113 Y INTS7,PPP2R5A,PPP2R5A PPP2R5A NA NA NA NA PPP2R5A 1201 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 212661846 212662402 212662104 Y ATF3,ATF3,ATF3 NA ATF3,FAM71A,ANGEL2,NSL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NENF 57617 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 212731490 212732709 212732386 Y NA ATF3 ATF3 K562,MCF7 ChIA-PET 22265404 ATF3 3967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 212780782 212781279 212780943 Y NA ATF3 NA NA NA NA ATF3 44106 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 213160414 213160619 213160568 Y VASH2 VASH2,ANGEL2 NA NA NA NA ANGEL2 26549 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 214512112 214512120 214512117 Y NA NA NA NA NA NA SMYD2 59667 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 214612784 214613126 214613017 Y NA NA NA NA NA NA PTPN14 110666 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 219633560 219633803 219633682 Y NA NA NA NA NA NA LYPLAL1 288374 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 220359525 220359939 220359742 Y NA NA NA NA NA NA MORF4L1P1 64973 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 220399770 220399931 220399853 Y NA MORF4L1P1,RAB3GAP2 NA NA NA NA MORF4L1P1 24981 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 221614030 221614267 221614237 Y DUSP10 NA C1orf140,HLX,MIA3 IMR90 Hi-C 24141950 DUSP10 299251 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 221916049 221916599 221916319 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 2531 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 222060426 222060817 222060685 Y NA NA DUSP10 MCF7 ChIA-PET 22265404 DUSP10 146908 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 222638782 222639204 222638963 Y NA NA DUSP10,MIA3,AIDA,BROX IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-378J18.3 121963 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 223901276 223901546 223901311 Y TP53BP2,FBXO28,CAPN2 CAPN8,CAPN2 NA NA NA NA CAPN2 13981 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 223907308 223907681 223907376 Y NA CAPN2 NA NA NA NA CAPN2 20013 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 223914239 223914747 223914523 Y TP53BP2,FBXO28,CAPN2 CAPN2 NA NA NA NA CAPN2 26944 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 223925260 223925580 223925340 Y NA CAPN2 NA NA NA NA CAPN2 37965 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 224019430 224020596 224019827 Y FBXO28,TP53BP2 TP53BP2 NA NA NA NA TP53BP2 11078 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 224026476 224026743 224026681 Y NA TP53BP2 NA NA NA NA TP53BP2 4931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 224180261 224180516 224180350 Y NA NA NA NA NA NA FBXO28 119273 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr1 224359201 224359533 224359347 Y NA RP11-365O16.1,DEGS1 NA NA NA NA RP11-365O16.1 1875 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 225613143 225613456 225613257 Y LBR,LBR LBR NA NA NA NA LBR 1171 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 225780677 225780772 225780725 Y NA NA NA NA NA NA ENAH 58072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 226005413 226005573 226005512 Y NA SRP9,EPHX1 NA NA NA NA EPHX1 9619 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 226163769 226163979 226163848 Y NA NA NA NA NA NA PYCR2 53791 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 226297611 226298113 226297674 Y NA NA ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 50059 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 226315308 226315548 226315420 Y PARP1 NA NA NA NA NA ACBD3 56883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 226315631 226315825 226315781 Y PARP1,LIN9,PYCR2 NA NA NA NA NA ACBD3 56606 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 226842752 226843521 226843149 Y ITPKB NA NA NA NA NA ITPKB 81503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 226890865 226891416 226891300 Y ITPKB ITPKB NA NA NA NA ITPKB 33608 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr1 228634060 228634141 228634103 Y TRIM17,HIST3H2A TRIM11,RP11-245P10.4,TRIM17,HIST3H2A,HIST3H2BB,HIST3H2BA,RNF187 NA NA NA NA HIST3H2A 9419 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 228783266 228783899 228783495 Y C1orf35,TRIM11,HIST3H2A,RHOU NA NA NA NA NA RHOU 84925 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 229366402 229366798 229366551 Y C1orf96 RP5-1061H20.4,RAB4A RHOU,NUP133 IMR90 Hi-C 24141950 RP5-1061H20.4 37977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 229388898 229389111 229388968 Y URB2,TAF5L,NUP133,RAB4A,C1orf96 RP5-1061H20.4,RAB4A RHOU,NUP133,ABCB10 IMR90 Hi-C 24141950 RP5-1061H20.4 15664 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 231083969 231084208 231084171 Y NA TTC13,ARV1 NA NA NA NA TTC13 28413 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 231868761 231869568 231868969 Y NA NA NA NA NA NA DISC1 108200 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 232765644 232766127 232765957 Y NA NA TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 RNU1-74P 199806 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr1 233763307 233763375 233763341 Y KCNK1 KCNK1 NA NA NA NA KCNK1 15557 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 233763606 233763782 233763694 Y NA KCNK1 NA NA NA NA KCNK1 15856 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 234163168 234163347 234163228 Y SLC35F3 NA NA NA NA NA SLC35F3 124489 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 234659231 234659760 234659519 Y IRF2BP2 TARBP1 NA NA NA NA TARBP1 46382 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 234728712 234729023 234728867 Y NA IRF2BP2 NA NA NA NA IRF2BP2 14248 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 234738546 234738834 234738624 Y IRF2BP2 IRF2BP2,RP4-781K5.4 NA NA NA NA IRF2BP2 4437 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 234746093 234747674 234747395 Y IRF2BP2 IRF2BP2,RP4-781K5.4 NA NA NA NA IRF2BP2 2822 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 234748100 234748931 234748566 Y IRF2BP2 IRF2BP2,RP4-781K5.4 NA NA NA NA IRF2BP2 4829 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 234792654 234793437 234793098 Y NA IRF2BP2,RP4-781K5.4 IRF2BP2,TARBP1,LINC00184,LOC100506810 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP4-781K5.4 12619 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr1 234908151 234908764 234908277 Y IRF2BP2 NA IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP4-781K5.4 128116 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 235133014 235133422 235133155 Y NA NA LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 156829 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 235134086 235134438 235134232 Y NA NA LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 155813 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 235468267 235468477 235468372 Y NA GGPS1,ARID4B NA NA NA NA GGPS1 20188 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 235668656 235669018 235668830 Y RBM34,ARID4B,ARID4B B3GALNT2 NA NA NA NA B3GALNT2 2875 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 236041479 236041632 236041556 Y NA LYST LYST,GNG4,B3GALNT2,NID1 IMR90 Hi-C 24141950 LYST 3308 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 236080566 236081247 236080933 Y LYST,GPR137B LYST B3GALNT2,LYST,NID1 IMR90 Hi-C 24141950 LYST 35626 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 236431064 236431243 236431072 Y LGALS8,ERO1LB ERO1LB NA NA NA NA ERO1LB 12076 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr1 237634251 237634535 237634324 Y NA NA NA NA NA NA MTR 677641 CAGE HCC1806 hg19 FANTOM5 11.301431393808 chr1 237645107 237645291 237645199 Y RYR2 NA NA NA NA NA MTR 688497 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 240306165 240306375 240306208 Y NA ADH5P3 NA NA NA NA ADH5P3 25080 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 240306412 240306787 240306695 Y NA ADH5P3 NA NA NA NA ADH5P3 24668 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 240306890 240307603 240307416 Y NA ADH5P3 NA NA NA NA ADH5P3 23852 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 240307621 240308162 240308005 Y NA ADH5P3 NA NA NA NA ADH5P3 23293 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 240308207 240308537 240308375 Y NA ADH5P3 NA NA NA NA ADH5P3 22918 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 240308546 240308862 240308776 Y NA ADH5P3 NA NA NA NA ADH5P3 22593 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr1 241705436 241706018 241705703 Y KMO FH,KMO NA NA NA NA KMO 12002 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 241771916 241772216 241772151 Y KMO CHML NA NA NA NA CHML 25016 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 241781298 241781471 241781421 Y NA CHML NA NA NA NA CHML 15761 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 242108255 242108348 242108324 Y NA NA EXO1 IMR90 Hi-C 24141950 EXO1 98986 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 243893800 243893985 243893919 Y NA NA NA NA NA NA AKT3 118396 CAGE HCC1806 hg19 FANTOM5 4.23803677267798 chr1 244486299 244486688 244486462 Y AKT3,AKT3,ADSS NA SDCCAG8,ADSS IMR90 Hi-C 24141950 ADSS 126748 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 244512430 244512879 244512496 Y ADSS NA C1orf100,ADSS,AKT3 IMR90 Hi-C 24141950 ADSS 100557 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 244525463 244525578 244525509 Y NA NA NA NA NA NA ADSS 87858 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 244532902 244533005 244532971 Y NA NA NA NA NA NA ADSS 80431 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr1 244535063 244535306 244535184 Y NA NA NA NA NA NA ADSS 78130 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr1 245162358 245162654 245162559 Y NA EFCAB2 NA NA NA NA EFCAB2 31351 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 245196282 245196669 245196476 Y NA NA NA NA NA NA EFCAB2 65275 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 245255337 245255432 245255385 Y NA NA NA NA NA NA KIF26B 60855 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246042512 246042669 246042578 Y NA NA NA NA NA NA SMYD3 625945 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246061196 246061440 246061372 Y NA NA NA NA NA NA SMYD3 607174 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246249452 246249819 246249636 Y SMYD3 NA NA NA NA NA SMYD3 418795 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246323685 246324051 246324002 Y NA NA NA NA NA NA SMYD3 344563 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 246730569 246731007 246730621 Y AHCTF1,CNST TFB2M,CNST NA NA NA NA CNST 2823 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246760708 246760962 246760810 Y SMYD3,CNST TFB2M,CNST NA NA NA NA CNST 32962 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246763574 246763751 246763579 Y NA TFB2M,CNST NA NA NA NA CNST 35828 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 246772310 246772610 246772421 Y NA TFB2M,CNST NA NA NA NA CNST 44564 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 247035132 247035504 247035470 Y CNST,ZNF669,AHCTF1 NA NA NA NA NA AHCTF1 57776 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr1 247206107 247206337 247206222 Y NA ZNF695,ZNF670 NA NA NA NA ZNF670 33776 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 247295865 247296225 247296038 Y ZNF695,ZNF670,ZNF669 ZNF669 NA NA NA NA ZNF669 30191 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr1 248894360 248894532 248894495 Y NA NA NA NA NA NA SH3BP5L 224300 CAGE HCC1806 hg19 FANTOM5 6.59250164638797 chr10 384217 384634 384602 Y NA NA NA NA NA NA ZMYND11 205812 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 729218 729515 729367 Y NA DIP2C NA NA NA NA DIP2C 4168 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 975785 976368 976035 Y NA LARP4B DIP2C,LARP4B,GTPBP4,IDI1,IDI2-AS1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LARP4B 221 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 1541138 1541906 1541672 Y WDR37,ADARB2 ADARB2-AS1 NA NA NA NA ADARB2-AS1 24926 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 2256285 2256680 2256409 Y NA NA NA NA NA NA ADARB2-AS1 689453 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 2992232 2992361 2992295 Y NA NA WDR37,LINC00200 IMR90 Hi-C 24141950 PFKP 114164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3094057 3094288 3094153 Y NA PFKP PFKP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFKP 12237 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3216614 3216797 3216708 Y NA PITRM1 NA NA NA NA PITRM1 3611 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 3497590 3497951 3497729 Y NA NA LOC100216001,LOC338588,KLF6 IMR90 Hi-C 24141950 PITRM1 284587 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3509617 3509911 3509759 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PITRM1 296614 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3510310 3510716 3510597 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PITRM1 297307 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 3800307 3800531 3800378 Y KLF6 KLF6 NA NA NA NA KLF6 24942 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 3845250 3845852 3845788 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 19777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3853393 3854169 3853583 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 27920 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3896143 3896475 3896326 Y NA NA LOC100216001,LOC338588,KLF6 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 70670 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3948614 3948936 3948805 Y NA NA LOC100216001,LOC338588,KLF6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 123141 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 3984866 3985563 3985082 Y KLF6 NA KLF6,LOC100216001,LOC338588 IMR90 Hi-C 24141950 KLF6 159393 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 4386754 4387085 4386858 Y NA NA LOC338588,LOC100216001,PITRM1,LOC100507034,KLF6 IMR90 Hi-C 24141950 LINC00702 102650 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 4775344 4775645 4775580 Y NA NA LOC338588,LOC100216001,KLF6 MCF7 ChIA-PET 22265404 AKR1E2 51176 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 4891874 4892173 4892030 Y NA AKR1C1 NA NA NA NA AKR1C1 40623 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 4937004 4937357 4937181 Y NA AKR1C1 NA NA NA NA AKR1C1 4208 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 5333644 5334212 5333929 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 118302 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 5334474 5334640 5334544 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 117874 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 5504427 5504665 5504478 Y NA CALML5 NA NA NA NA CALML5 34868 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 5530637 5531333 5530982 Y NA CALML5 NA NA NA NA CALML5 8200 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr10 5587810 5588190 5587923 Y NA CALML5,RP13-463N16.6 NA NA NA NA RP13-463N16.6 47891 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 5593718 5593999 5593816 Y NET1,CALML3 RP13-463N16.6 NET1 IMR90 Hi-C 24141950 RP13-463N16.6 42082 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 5607602 5608000 5607781 Y CALML3 RP13-463N16.6 NET1,CALML5 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP13-463N16.6 28081 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 5608647 5608913 5608759 Y NA RP13-463N16.6,RP11-336A10.4 NET1,CALML5 IMR90 Hi-C 24141950 RP13-463N16.6 27168 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 5638863 5639270 5639216 Y NET1,CALML3 RP13-463N16.6,RP11-336A10.4 NET1 K562,MCF7 ChIA-PET 22265404 RP13-463N16.6 2782 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 6245814 6246792 6246043 Y PFKFB3,PFKFB3 NA NA NA NA NA PFKFB3 60933 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 6281305 6281494 6281382 Y IL15RA,PFKFB3,PFKFB3 NA NA NA NA NA PFKFB3 96424 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 6443408 6443712 6443449 Y PFKFB3,PFKFB3 NA IL2RA,PFKFB3,LOC399715,FBXO18,RBM17,IL15RA,PRKCQ IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PFKFB3 258527 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr10 6449763 6450038 6449901 Y PRKCQ NA NA NA NA NA PFKFB3 264882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 8408171 8408387 8408297 Y NA NA FLJ45983,GATA3 MCF7 ChIA-PET 22265404 GATA3 314604 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 9052186 9052462 9052283 Y NA NA NA NA NA NA GATA3 958619 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 11017838 11018101 11017971 Y NA NA NA NA NA NA SFTA1P 182895 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 11054573 11055101 11054777 Y CELF2,CELF2 NA NA NA NA NA SFTA1P 219630 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 11835953 11836243 11836176 Y C10orf47 NA NA NA NA NA ECHDC3 53588 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 11924114 11924319 11924232 Y C10orf47 NA NA NA NA NA ECHDC3 141749 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 11940492 11940889 11940732 Y NA NA NA NA NA NA UPF2 142280 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 12002775 12003103 12002939 Y NA NA NA NA NA NA UPF2 80066 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 12490797 12491318 12490959 Y SEC61A2,CAMK1D NA NA NA NA NA CAMK1D 101316 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 13390886 13391219 13391148 Y NA PHYH,SEPHS1 NA NA NA NA SEPHS1 2589 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 13391797 13392252 13392084 Y SEPHS1 PHYH,SEPHS1 NA NA NA NA SEPHS1 3500 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 13908290 13908478 13908416 Y NA NA NA NA NA NA RP11-397C18.2 205805 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 13928984 13929094 13929038 Y NA NA NA NA NA NA RP11-397C18.2 185189 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 14026617 14027027 14026853 Y NA NA NA NA NA NA RP11-397C18.2 87256 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 14602319 14602604 14602483 Y NA NA NA NA NA NA FRMD4A 100178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 14605482 14605831 14605731 Y HSPA14,DCLRE1C NA NA NA NA NA FRMD4A 103341 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 14641847 14641963 14641950 Y NA NA NA NA NA NA FRMD4A 139706 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 14647138 14647588 14647478 Y NA NA NA NA NA NA FRMD4A 144997 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 15191044 15191371 15191092 Y MEIG1,NMT2,C10orf111 NMT2 NA NA NA NA NMT2 17321 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 15238092 15238482 15238159 Y NA NMT2 NA NA NA NA NMT2 29400 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 17104584 17104750 17104681 Y NA NA NA NA NA NA TRDMT1 137303 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 17105178 17105416 17105257 Y NA NA NA NA NA NA TRDMT1 136637 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 20249117 20249390 20249254 Y NA NA NA NA NA NA PLXDC2 145949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 20450242 20450397 20450276 Y PLXDC2 NA NA NA NA NA PLXDC2 347074 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 21291623 21291954 21291791 Y NA NA NA NA NA NA NEBL 169162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 21816029 21816444 21816223 Y NA MLLT10 NA NA NA NA MLLT10 4650 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 22039558 22039808 22039651 Y MLLT10,MLLT10 NA NA NA NA NA RN7SKP37 180264 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 22725331 22726270 22725901 Y NA NA NA NA NA NA BMI1 117191 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 22870490 22870524 22870509 Y NA NA NA NA NA NA PIP4K2A 130960 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 26191189 26191209 26191199 Y NA NA NA NA NA NA PDSS1 793379 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 27032794 27033066 27033024 Y NA PDSS1 NA NA NA NA PDSS1 48206 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 27419520 27419901 27419745 Y NA ANKRD26,MASTL,YME1L1 NA NA NA NA MASTL 21852 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 29924706 29925406 29925356 Y SVIL NA NA NA NA NA SVIL 98304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 30073207 30073608 30073571 Y SVIL SVIL SVIL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SVIL 49497 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 30092989 30093361 30093263 Y SVIL NA SVIL,KIAA1462,MIR604 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SVIL 69279 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 30720407 30720642 30720475 Y MAP3K8 MAP3K8 NA NA NA NA MAP3K8 224 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 30780085 30781069 30780330 Y MAP3K8 NA MAP3K8 IMR90 Hi-C 24141950 MAP3K8 59219 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 30876225 30877110 30876753 Y MAP3K8,ZNF438,ZNF438 NA LOC729668,MAP3K8 IMR90 Hi-C 24141950 MAP3K8 155359 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 31892273 31892723 31892643 Y NA NA ZEB1 IMR90 Hi-C 24141950 ZEB1-AS1 284897 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 32218329 32218518 32218508 Y NA ARHGAP12 NA NA NA NA ARHGAP12 2587 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 32735821 32736068 32735865 Y NA CCDC7 C10orf68 MCF7 ChIA-PET 22265404 CCDC7 2753 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 33269452 33269916 33269602 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 22804 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 33422989 33423776 33423207 Y NA NA ITGB1 IMR90 Hi-C 24141950 ITGB1 130269 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 33562254 33562552 33562425 Y ITGB1,ITGB1,NRP1 NA NA NA NA NA NRP1 60638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 33893152 33893448 33893300 Y NA NA NA NA NA NA NRP1 269962 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 35932153 35932694 35932189 Y FZD8 FZD8 NA NA NA NA FZD8 3791 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 38264185 38264489 38264470 Y ZNF37A,ZNF248,ZNF25 ZNF25,ZNF33A NA NA NA NA ZNF25 624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 43249248 43249682 43249506 Y NA BMS1 NA NA NA NA BMS1 26567 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 43600895 43601120 43601049 Y RASGEF1A CSGALNACT2 NA NA NA NA CSGALNACT2 30814 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 43818292 43818511 43818402 Y NA FXYD4 ZNF487P IMR90 Hi-C 24141950 FXYD4 46579 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 45491838 45491921 45491882 Y C10orf10 RASSF4,C10orf10,ZNF22,C10orf25 NA NA NA NA ZNF22 2002 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 47080536 47081217 47080878 Y GPRIN2 NA NA NA NA NA FAM25B 98464 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 47137749 47138065 47137950 Y NA FAM25B NA NA NA NA FAM25B 41616 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 48323344 48323752 48323648 Y NA RP11-463P17.1,ZNF488 SYT15,GPRIN2 IMR90 Hi-C 24141950 RP11-463P17.1 6445 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 48482238 48482583 48482338 Y NA NA NA NA NA NA ZNF488 129214 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 52037840 52038115 52037944 Y SGMS1 DYNC1I2P1 SGMS1 IMR90 Hi-C 24141950 DYNC1I2P1 15102 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 52079574 52079882 52079666 Y NA NA NA NA NA NA DYNC1I2P1 56836 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 52083052 52083210 52083101 Y FAM21A NA NA NA NA NA DYNC1I2P1 60314 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 52167205 52167434 52167402 Y NA NA NA NA NA NA DYNC1I2P1 144467 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 52270106 52270351 52270231 Y NA NA NA NA NA NA SGMS1 112572 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 54224630 54224737 54224684 Y NA RP11-346D6.6 DKK1,LOC100506939 IMR90 Hi-C 24141950 RP11-346D6.6 3556 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 54774491 54774616 54774570 Y MBL2 NA NA NA NA NA RP11-346D6.6 546198 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 60026015 60026385 60026202 Y UBE2D1,IPMK IPMK,CISD1 NA NA NA NA IPMK 321 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 61992765 61993042 61992980 Y NA NA NA NA NA NA CCDC6 328351 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 62140958 62141228 62141093 Y NA NA NA NA NA NA CDK1 394861 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 62491040 62491560 62491373 Y ANK3 CDK1 NA NA NA NA CDK1 44529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 63736420 63736602 63736437 Y NA NA NA NA NA NA ARID5B 77361 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 64377429 64378105 64377496 Y EGR2,EGR2 NA NA NA NA NA ADO 184411 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65016713 65017097 65017085 Y NA NA NA NA NA NA NRBF2 125663 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65033384 65033629 65033527 Y NRBF2,JMJD1C NA NA NA NA NA NRBF2 142334 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65078433 65078736 65078637 Y NA NA NA NA NA NA JMJD1C 144986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65078745 65079133 65078939 Y NA NA NA NA NA NA JMJD1C 144589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65097775 65098183 65098051 Y NA NA NA NA NA NA JMJD1C 125539 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65196810 65197156 65196994 Y NA JMJD1C NA NA NA NA JMJD1C 26566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65269177 65269730 65269542 Y NA JMJD1C,REEP3 REEP3,JMJD1C,LOC84989 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 REEP3 9393 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 65274637 65275000 65274913 Y NA REEP3 JMJD1C,REEP3 IMR90 Hi-C 24141950 REEP3 4123 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 65930110 65930546 65930307 Y NA NA NA NA NA NA RP11-170M17.2 269105 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 69658139 69658146 69658142 Y HNRNPH3,SIRT1,SIRT1 SIRT1 HERC4 IMR90 Hi-C 24141950 SIRT1 15712 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 69778500 69778679 69778642 Y NA NA NA NA NA NA HERC4 54426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 69796463 69796828 69796573 Y HERC4 HERC4 NA NA NA NA HERC4 36277 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 69822197 69822546 69822385 Y NA HERC4 NA NA NA NA HERC4 10559 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 69854882 69855277 69855187 Y HERC4 HERC4 ATOH7,HNRNPH3,PBLD,MYPN,HERC4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HERC4 21777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 70735854 70735920 70735884 Y CCAR1,SUPV3L1,DDX50,DDX21 DDX21,KIAA1279 KIAA1279 IMR90 Hi-C 24141950 KIAA1279 10567 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 70736024 70736384 70736191 Y SRGN DDX21,KIAA1279 KIAA1279 IMR90 Hi-C 24141950 KIAA1279 10103 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 71109104 71109433 71109270 Y NA NA NA NA NA NA HK1 81364 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 71928097 71928630 71928606 Y NA AIFM2,TYSND1 TYSND1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SAR1A 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 71984000 71984297 71984282 Y NA PPA1 NA NA NA NA PPA1 7370 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 72027304 72027694 72027415 Y NA PPA1 NA NA NA NA PPA1 35637 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 72165059 72165574 72165379 Y NA LRRC20,EIF4EBP2 NA NA NA NA EIF4EBP2 2924 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 72973788 72974249 72973953 Y UNC5B UNC5B,UNC5B-AS1 NA NA NA NA UNC5B-AS1 1736 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 73745585 73745830 73745708 Y NA CHST3 NA NA NA NA CHST3 23462 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 73790594 73790943 73790840 Y NA NA NA NA NA NA SPOCK2 55847 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 73840531 73840743 73840590 Y ASCC1,ASCC1,SPOCK2 SPOCK2 NA NA NA NA SPOCK2 6047 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 73986513 73986881 73986533 Y C10orf105,C10orf54,CDH23,CDH23 ANAPC16,ASCC1,DDIT4 NA NA NA NA ASCC1 11621 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 74056833 74058104 74057179 Y PSAP,DDIT4,DNAJB12 DDIT4 NA NA NA NA DDIT4 25155 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 74085147 74085316 74085305 Y NA DNAJB12 NA NA NA NA DNAJB12 27672 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 74091661 74092150 74091920 Y PSAP,DDIT4,DNAJB12 DNAJB12 NA NA NA NA DNAJB12 20838 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 74436264 74436425 74436399 Y CCDC109A,ASCC1,ASCC1 HMGN2P34,MCU MICU1,OIT3,PLA2G12B,MCU IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MCU 13464 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 74850921 74850988 74850953 Y ANXA7,ECD P4HA1,NUDT13 NA NA NA NA P4HA1 3744 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 74925047 74925060 74925055 Y ANXA7,ECD FAM149B1,ECD NA NA NA NA FAM149B1 864 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 75004761 75005017 75004932 Y NA DNAJC9,MRPS16,RP11-152N13.5 NA NA NA NA DNAJC9 1603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 75022023 75022098 75022060 Y NA DNAJC9,MRPS16,RP11-152N13.5 NA NA NA NA RP11-152N13.5 11474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 75361338 75361489 75361457 Y NA USP54 USP54,PPP3CB,BMS1P4,SEC24C,SYNPO2L,MYOZ1,CHCHD1,TTC18,C10orf103 IMR90 Hi-C 24141950 USP54 22222 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 75648556 75649146 75648996 Y ANXA7,NDST2 CAMK2G,PLAU SEC24C,FUT11,LOC100507331,CAMK2G,NDST2,KIAA0913,VCL,PLAU,C10orf55,AP3M1,ADK IMR90 Hi-C 24141950 CAMK2G 16213 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 75666465 75666800 75666554 Y ANXA7,NDST2 CAMK2G,PLAU NA NA NA NA PLAU 135 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 75987927 75988078 75987990 Y KIAA0913,NDST2,CAMK2G,ADK NA NA NA NA NA ADK 78967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 76985148 76985510 76985329 Y NA VDAC2,COMTD1,HMGA1P5 NA NA NA NA COMTD1 8278 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 79538272 79538371 79538344 Y NA NA NA NA NA NA DLG5 146007 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 79685177 79685609 79685373 Y NA DLG5 NA NA NA NA DLG5 799 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 80626499 80626705 80626607 Y NA NA LOC283050,ZMIZ1,RPS24,LOC100132987,POLR3A IMR90 Hi-C 24141950 ZMIZ1 200087 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 80732492 80734123 80733460 Y ZMIZ1,PPIF NA NA NA NA NA ZMIZ1 92669 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 80911539 80911799 80911619 Y ZMIZ1,PPIF NA NA NA NA NA ZMIZ1 84747 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 81080868 81081434 81081104 Y ZMIZ1,PPIF PPIF NA NA NA NA PPIF 23791 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 81946319 81946704 81946639 Y ANXA11 ANXA11 NA NA NA NA ANXA11 16624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 81960969 81961796 81961521 Y SH2D4B,ANXA11 ANXA11,EIF5AP4 NA NA NA NA ANXA11 1532 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 81962798 81963579 81963388 Y SH2D4B,ANXA11 EIF5AP4 NA NA NA NA ANXA11 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 82214819 82214901 82214871 Y TSPAN14 FAM213A,TSPAN14 NA NA NA NA TSPAN14 2897 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 82215085 82215437 82215324 Y TSPAN14,SH2D4B FAM213A,TSPAN14 NA NA NA NA TSPAN14 3163 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 82237584 82237869 82237663 Y TSPAN14 TSPAN14 NA NA NA NA TSPAN14 25662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 82253401 82253904 82253623 Y NA TSPAN14,RP11-137H2.4 NA NA NA NA RP11-137H2.4 39794 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 82260440 82261008 82260524 Y TSPAN14 TSPAN14,RP11-137H2.4 NA NA NA NA RP11-137H2.4 32690 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 86089822 86090305 86090054 Y FAM190B NA NA NA NA NA CDHR1 137412 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 86093705 86094297 86093848 Y NA NA NA NA NA NA CDHR1 141295 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 87704584 87704927 87704756 Y NA NA NA NA NA NA WAPAL 574645 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 88470805 88471213 88471023 Y NA BMPR1A NA NA NA NA BMPR1A 43194 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 89912666 89913039 89912909 Y NA NA KLLN,PTEN,RNLS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-380G5.3 209407 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 90618239 90618823 90618469 Y IFIT3,IFIT3,IFIT2,ANKRD22 ANKRD22,STAMBPL1 ACTA2,ANKRD22 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD22 8664 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 91020368 91020477 91020401 Y IFIT5,IFIT1,IFIT3,IFIT3,IFIT2 RP11-149I23.3,IFIT2 NA NA NA NA RP11-149I23.3 21045 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 92921990 92922253 92922075 Y HECTD2 NA ANKRD1,PCGF5,RPP30,NUDT9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PCGF5 55655 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 92928766 92928934 92928784 Y NA PCGF5 RPP30 IMR90 Hi-C 24141950 PCGF5 48974 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 93697836 93698042 93697939 Y NA FGFBP3,BTAF1 NA NA NA NA BTAF1 16310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 94459466 94459797 94459609 Y HHEX HHEX NA NA NA NA HHEX 13521 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95136235 95136595 95136450 Y MYOF NA NA NA NA NA MYOF 103479 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95193537 95193891 95193765 Y MYOF MYOF NA NA NA NA MYOF 46183 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95195782 95196689 95196040 Y MYOF MYOF NA NA NA NA MYOF 43385 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95200243 95200778 95200520 Y CYP26C1,MYOF MYOF NA NA NA NA MYOF 39296 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95205346 95205630 95205524 Y NA MYOF,CEP55 NA NA NA NA MYOF 34444 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 95218561 95218998 95218660 Y MYOF MYOF,CEP55 NA NA NA NA MYOF 21076 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95222493 95222944 95222696 Y NA MYOF,CEP55 NA NA NA NA MYOF 17130 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95224149 95224369 95224367 Y NA MYOF,CEP55 NA NA NA NA MYOF 15705 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95224699 95224811 95224754 Y NA MYOF,CEP55 NA NA NA NA MYOF 15263 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 95225325 95225770 95225711 Y MYOF MYOF,CEP55 NA NA NA NA MYOF 14304 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr10 95228207 95228553 95228471 Y MYOF,CEP55,CEP55 MYOF,CEP55 NA NA NA NA MYOF 11521 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr10 97020432 97020603 97020519 Y NA PDLIM1 NA NA NA NA PDLIM1 28178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 97024100 97024800 97024493 Y NA PDLIM1 NA NA NA NA PDLIM1 23981 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 97026412 97026787 97026670 Y NA PDLIM1 NA NA NA NA PDLIM1 21994 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 97308667 97309047 97308880 Y NA SORBS1 NA NA NA NA SORBS1 10124 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 99172845 99172912 99172879 Y C10orf12,ZFYVE27,ZFYVE27,FRAT2 RRP12,PGAM1,EXOSC1,ZDHHC16 PGAM1,RRP12,ZDHHC16,EXOSC1 MCF7,K562 ChIA-PET 22265404 PGAM1 11005 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 100120877 100121283 100120897 Y PYROXD2,LOXL4 NA PYROXD2,C10orf28,LOXL4,HPS1 IMR90 Hi-C 24141950 PYROXD2 51658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 100153138 100153356 100153248 Y NA PYROXD2 NA NA NA NA PYROXD2 19585 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 101539519 101539906 101539726 Y NA COX15 NA NA NA NA COX15 49662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 101666342 101666477 101666411 Y NA NA NA NA NA NA DNMBP 101199 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 101677861 101678026 101677917 Y NA NA NA NA NA NA DNMBP 89650 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 101765990 101766360 101766233 Y NA DNMBP NA NA NA NA DNMBP 1316 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 102130783 102131327 102130955 Y CWF19L1 SCD,AL139819.1,LINC00263 NA NA NA NA LINC00263 45 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 103124623 103124787 103124739 Y FBXW4 BTRC DPCD,POLL IMR90 Hi-C 24141950 BTRC 12803 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 103600514 103600739 103600526 Y NA MGEA5 NA NA NA NA MGEA5 23818 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 104401686 104402330 104401988 Y NA NA NA NA NA NA TRIM8 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 104472705 104472855 104472743 Y NA ARL3,SFXN2 NA NA NA NA SFXN2 410 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 104892620 104892981 104892840 Y C10orf32,NT5C2 NA NA NA NA NA NT5C2 58075 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 104909684 104910071 104909878 Y NA NT5C2 NA NA NA NA NT5C2 40985 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 104956992 104957240 104957082 Y C10orf32,NT5C2 NT5C2 NA NA NA NA NT5C2 5936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 105255021 105255220 105255121 Y NA CALHM2 NA NA NA NA CALHM2 44361 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 105456300 105456542 105456434 Y NA NA NA NA NA NA OBFC1 219421 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 105650011 105650288 105650237 Y GSTO2,GSTO1,MEIR5,MEIR5,COL17A1,SLK OBFC1 SH3PXD2A IMR90 Hi-C 24141950 OBFC1 25675 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr10 105725440 105725838 105725745 Y NA OBFC1,SLK NA NA NA NA SLK 481 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 106020526 106021193 106020581 Y SLK,MEIR5,MEIR5,ITPRIP,CCDC147,GSTO1,GSTO1 WDR96,GSTO1,MIR4482-1,GSTO2 NA NA NA NA MIR4482-1 4984 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 108342157 108342240 108342208 Y NA NA NA NA NA NA ITPRIP 2245995 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 111766410 111766784 111766651 Y ADD3 ADD3 NA NA NA NA ADD3 12284 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 112116359 112116685 112116467 Y DUSP5,MXI1 NA SMC3,DUSP5,SMNDC1,RBM20 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMNDC1 53650 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 112158460 112158738 112158533 Y DUSP5 NA SMC3,DUSP5 IMR90 Hi-C 24141950 SMNDC1 95751 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr10 112159079 112159451 112159258 Y NA NA SMC3,DUSP5 IMR90 Hi-C 24141950 DUSP5 96145 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 112168008 112168205 112168118 Y DUSP5 NA DUSP5 IMR90 Hi-C 24141950 DUSP5 87391 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 112170161 112170538 112170357 Y DUSP5 NA DUSP5 IMR90 Hi-C 24141950 DUSP5 85058 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 112207134 112207519 112207380 Y NA DUSP5 DUSP5 IMR90 Hi-C 24141950 DUSP5 48077 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 112261043 112261328 112261185 Y SHOC2,DUSP5 DUSP5 NA NA NA NA DUSP5 5447 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 112290201 112290297 112290249 Y NA DUSP5,SMC3 NA NA NA NA DUSP5 34605 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 116080506 116080782 116080645 Y AFAP1L2 NA NA NA NA NA AFAP1L2 81733 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 118154890 118154986 118154939 Y NA PNLIPRP3 NA NA NA NA PNLIPRP3 30393 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 118500407 118500818 118500725 Y NA HSPA12A NA NA NA NA HSPA12A 322 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 118656077 118656284 118656258 Y NA ENO4,RP11-539I5.1 NA NA NA NA RP11-539I5.1 48361 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 118894357 118894681 118894572 Y VAX1 KIAA1598,VAX1 NA NA NA NA VAX1 1131 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 120072477 120072945 120072874 Y NA FAM204A NA NA NA NA FAM204A 26895 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 121028416 121028802 121028728 Y EIF3A,GRK5 NA NA NA NA NA GRK5 63315 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 121030438 121030814 121030688 Y GRK5 NA NA NA NA NA GRK5 65337 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 121065390 121065964 121065436 Y NA NA NA NA NA NA GRK5 100289 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 121075171 121075335 121075278 Y NA NA NA NA NA NA GRK5 110070 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 121829686 121829950 121829715 Y NA NA NA NA NA NA NACAP2 74465 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 123313040 123313152 123313149 Y FGFR2,FGFR2,FGFR2,FGFR2 FGFR2 NA NA NA NA FGFR2 42820 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 123873239 123873409 123873290 Y NA NA NA NA NA NA TACC2 126550 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 124067478 124067825 124067684 Y NA NA NA NA NA NA PLEKHA1 64387 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr10 124196519 124196712 124196524 Y TACC2,PLEKHA1,PLEKHA1,PLEKHA1 HTRA1 NA NA NA NA HTRA1 22329 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 125754916 125755682 125755196 Y CHST15 NA NA NA NA NA CPXM2 57133 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr10 125800015 125800214 125800088 Y CHST15 NA NA NA NA NA CHST15 50992 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126021099 126021412 126021201 Y CHST15 NA CHST15 IMR90 Hi-C 24141950 OAT 84133 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126029584 126030073 126029818 Y CHST15 NA HMX3 IMR90 Hi-C 24141950 OAT 75472 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126251501 126251899 126251725 Y METTL10 NA NA NA NA NA RPS10P18 74354 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126337254 126337585 126337480 Y CHST15,ZRANB1,FAM53B NA NA NA NA NA FAM53B-AS1 52609 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126382372 126382711 126382460 Y ZRANB1,FAM53B FAM53B-AS1,FAM53B NA NA NA NA FAM53B-AS1 7483 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126445536 126445891 126445571 Y ZRANB1 FAM53B,METTL10,FAM175B NA NA NA NA FAM53B 14698 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126712433 126712623 126712473 Y NA NA ZRANB1 IMR90 Hi-C 24141950 RP11-298J20.4 108721 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126782105 126782284 126782195 Y NA NA NA NA NA NA CTBP2 65455 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 126811654 126811843 126811733 Y NA CTBP2,MRPS21P6 ZRANB1 IMR90 Hi-C 24141950 CTBP2 35896 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 127440633 127440786 127440709 Y C10orf122,FANK1 NA NA NA NA NA UROS 69031 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 127583558 127583978 127583747 Y MMP21 RNU2-42P,DHX32,FANK1 NA NA NA NA FANK1 450 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 127591696 127592016 127591824 Y NA RNU2-42P,DHX32,FANK1 NA NA NA NA FANK1 8588 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr10 130017279 130017540 130017352 Y PTPRE NA EBF3,MGMT,LOC387723,GLRX3,CTAGE7P IMR90 Hi-C 24141950 MKI67 94630 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 131765501 131765764 131765633 Y NA EBF3 NA NA NA NA EBF3 5396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 133879247 133879524 133879406 Y NA NA BNIP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BNIP3 85812 CAGE HCC1806 hg19 FANTOM5 3.76714379793599 chr10 134001237 134001611 134001351 Y NA DPYSL4 NA NA NA NA DPYSL4 2833 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 134122010 134122092 134122081 Y NA STK32C,LRRC27 DPYSL4 IMR90 Hi-C 24141950 STK32C 21259 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 134221496 134221692 134221620 Y PWWP2B PWWP2B NA NA NA NA PWWP2B 12824 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 134260341 134260546 134260485 Y C10orf91 NA NA NA NA NA PWWP2B 51669 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr10 134349556 134349919 134349753 Y JAKMIP3,NKX6-2,C10orf92,INPP5A INPP5A NA NA NA NA INPP5A 232 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 134826942 134827305 134827042 Y NA NA LOC399829,INPP5A IMR90 Hi-C 24141950 TTC40 72615 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr10 135048867 135049308 135048949 Y TUBGCP2,ADAM8 ADAM8 NA NA NA NA ADAM8 39064 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 135074691 135075148 135074934 Y TUBGCP2,ADAM8 ADAM8,ZNF511,TUBGCP2 NA NA NA NA ADAM8 13224 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr10 135107749 135108037 135107982 Y ADAM8,TUBGCP2 ADAM8,ZNF511,TUBGCP2 NA NA NA NA ZNF511 11942 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 355877 356724 356385 Y NA IFITM1,IFITM3,B4GALNT4,PKP3 IFITM1,IFITM2,RIC8A,BET1L,ATHL1,PKP3 K562,MCF7 ChIA-PET 22265404 B4GALNT4 11072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 629192 629570 629436 Y IRF7,IRF7,SCT,DRD4 IRF7 NA NA NA NA IRF7 15193 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 1320394 1320580 1320544 Y DUSP8,TOLLIP,BRSK2 TOLLIP NA NA NA NA TOLLIP 8304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 1357863 1358286 1357997 Y TOLLIP,BRSK2 TOLLIP TOLLIP,LOC255512 K562 ChIA-PET 22265404 TOLLIP 28979 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 1569740 1569888 1569766 Y TNNT3,TNNI2,TNNI2,DUSP8 DUSP8 NA NA NA NA DUSP8 21262 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 1791889 1792111 1791952 Y TOLLIP,TNNI2,LSP1 RP11-295K3.1,CTSD,AC068580.7 IGF2,INS-IGF2,IGF2-AS1,TH,MIR4686,MOB2,IFITM10 H1ESC,GM12878,HELA,K562,IMR90,MCF7 5C,Hi-C,3C,ChIA-PET 22955621,24141950,19890323,22265404 AC068580.7 5507 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 3180503 3180713 3180608 Y ART1 OSBPL5 NA NA NA NA OSBPL5 5256 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 3742975 3743362 3743342 Y NA NA NA NA NA NA PGAP2 73592 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 5953770 5953923 5953776 Y NA TRIM5 NA NA NA NA TRIM5 3926 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr11 6224718 6224948 6224898 Y TPP1,FAM160A2 FAM160A2 NA NA NA NA FAM160A2 28993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 6489893 6490567 6490471 Y OR56A4,OR56A1,OR56B4,OR52W1,OR2AG1,OR2AG2,OR10A5,OR10A4,OR10A2,OR6A2,DCHS1 TRIM3,ARFIP2 NA NA NA NA TRIM3 3122 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 6523174 6523531 6523244 Y OR2D2 TRIM3,ARFIP2 NA NA NA NA ARFIP2 22508 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 6699628 6699937 6699850 Y OR52W1,OR10A4,OR10A2,OR6A2,OR2AG1,OR2AG2 MRPL17 NA NA NA NA MRPL17 2695 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 8723535 8723638 8723587 Y STK33 RPL27A NA NA NA NA RPL27A 21577 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 9385760 9386326 9386092 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 17843 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 9587499 9588027 9587720 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1 ZNF143,LOC644656 MCF7,K562 ChIA-PET 22265404 WEE1 5201 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr11 9590279 9590748 9590469 Y WEE1,WEE1 WEE1 LOC644656,ZNF143 K562,MCF7 ChIA-PET 22265404 WEE1 2480 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr11 11864878 11865300 11864975 Y NA USP47 NA NA NA NA USP47 3908 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 11998818 11999068 11999003 Y MICALCL DKK3 NA NA NA NA DKK3 30248 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12101706 12102070 12101803 Y DKK3,DKK3,PARVA,MICALCL,MICAL2 MICAL2 MICAL2,DKK3,USP47,MICALCL IMR90 Hi-C 24141950 MICAL2 11473 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12109558 12109847 12109697 Y PARVA,MICALCL,MICAL2 MICAL2 MICAL2,TEAD1,MICALCL,DKK3,USP47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MICAL2 3696 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 12111660 12111980 12111765 Y NA MICAL2 MICAL2,TEAD1,MICALCL,DKK3,USP47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MICAL2 1563 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12133218 12133350 12133292 Y MICAL2 MICAL2 NA NA NA NA MICAL2 19675 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12148184 12148552 12148402 Y NA MICAL2 NA NA NA NA MICAL2 34641 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 12188567 12188982 12188726 Y NA NA NA NA NA NA MICAL2 75024 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12197316 12197738 12197633 Y MICAL2,MICALCL NA NA NA NA NA MICAL2 83773 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12204570 12205016 12204699 Y MICAL2 NA NA NA NA NA MICAL2 91027 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12352954 12352993 12352974 Y NA PARVA NA NA NA NA PARVA 43739 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12698857 12698926 12698896 Y PARVA,TEAD1 TEAD1 NA NA NA NA TEAD1 4888 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 12824175 12824668 12824395 Y TEAD1 NA NA NA NA NA TEAD1 130206 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 13468446 13468721 13468666 Y NA BTBD10 NA NA NA NA BTBD10 14123 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 13961618 13961770 13961694 Y RRAS2 NA SPON1 IMR90 Hi-C 24141950 FAR1 273401 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 14306265 14306627 14306419 Y NA NA NA NA NA NA RRAS2 77425 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 16625688 16626709 16626131 Y SOX6,SOX6 C11orf58 SOX6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C11orf58 5970 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 16817853 16818086 16817948 Y NA NA NA NA NA NA RP11-466H18.1 176474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 17929463 17929485 17929474 Y NA NA NA NA NA NA SERGEF 103224 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 18426412 18426598 18426470 Y NA LDHA,AC084117.3,LDHC NA NA NA NA AC084117.3 1256 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 21930727 21931048 21930905 Y NA NA NA NA NA NA ANO5 281674 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 24953714 24954095 24953889 Y NA NA NA NA NA NA MUC15 1637685 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr11 27451921 27452137 27452029 Y NA LGR4 NA NA NA NA LGR4 40185 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 28063321 28063497 28063482 Y NA NA NA NA NA NA METTL15 64298 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 28128920 28129110 28128941 Y METTL15 METTL15,KIF18A NA NA NA NA KIF18A 1065 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 33313001 33313236 33313097 Y NA HIPK3 NA NA NA NA HIPK3 36783 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 33342450 33342853 33342574 Y NA NA NA NA NA NA HIPK3 66232 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 33711808 33712191 33712002 Y CD59 CD59 NA NA NA NA CD59 43800 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 33713598 33714029 33713919 Y CD59 CD59 NA NA NA NA CD59 41962 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr11 33742880 33743486 33743237 Y NA CD59 NA NA NA NA CD59 12505 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 33778086 33778269 33778178 Y FBXO3 CD59,FBXO3,RP11-646J21.5 NA NA NA NA FBXO3 15820 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 33958868 33959233 33959043 Y NA LMO2 LMO2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LMO2 47032 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 34125347 34125667 34125520 Y NA NAT10 NA NA NA NA NAT10 198 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 34322205 34322459 34322337 Y NA RP1-145M24.1 NA NA NA NA RP1-145M24.1 33091 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 34368265 34368539 34368419 Y NA RP1-145M24.1,ABTB2 NAT10,CAPRIN1 IMR90 Hi-C 24141950 ABTB2 9016 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 34426692 34426969 34426750 Y ABTB2 ABTB2,CAT ABTB2,NAT10,CAT IMR90 Hi-C 24141950 CAT 31503 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 34622320 34622551 34622432 Y ELF5,ELF5,EHF,EHF RP11-350D17.2,EHF APIP,EHF,SLC1A2,ELF5,CD44 IMR90 Hi-C 24141950 EHF 18089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 34661390 34661585 34661450 Y ABTB2,ELF5,ELF5,EHF,EHF EHF NA NA NA NA EHF 20750 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 34675579 34675977 34675664 Y ABTB2,CD44 EHF NA NA NA NA EHF 34939 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 34706877 34707176 34707110 Y ABTB2,EHF NA NA NA NA NA EHF 66237 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 34931457 34931889 34931828 Y NA PDHX,APIP NA NA NA NA PDHX 3487 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 35052236 35052689 35052493 Y CD44 NA SLC1A2,CD44,PDHX IMR90 Hi-C 24141950 CD44 105728 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 35061713 35062540 35061871 Y CD44 NA CD44,SLC1A2,PDHX IMR90 Hi-C 24141950 CD44 95877 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 35103874 35105511 35104330 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 52906 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 35188303 35189153 35188420 Y CD44 CD44 NA NA NA NA CD44 29886 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 35355923 35356216 35356038 Y NA NA NA NA NA NA CD44 197506 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 35356248 35356471 35356416 Y CD44 NA NA NA NA NA CD44 197831 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 36211739 36211961 36211850 Y NA NA NA NA NA NA COMMD9 97038 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 39183372 39183493 39183434 Y NA RP11-313M3.1 NA NA NA NA RP11-313M3.1 2369 CAGE HCC1806 hg19 FANTOM5 8.24062705798497 chr11 43779324 43779404 43779364 Y NA NA NA NA NA NA ALKBH3 120957 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 45201958 45202605 45202216 Y NA NA NA NA NA NA TP53I11 231118 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 46264726 46265198 46265009 Y NA CREB3L1 DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB3L1 32014 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 46706691 46706778 46706735 Y NA ARHGAP1,ZNF408 NA NA NA NA ARHGAP1 13387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 47100313 47100604 47100460 Y MADD,MADD,LRP4 NA NA NA NA NA ARFGAP2 96072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 47173206 47173550 47173416 Y NA ARFGAP2,PACSIN3 NA NA NA NA ARFGAP2 23126 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 47573563 47574025 47573747 Y NR1H3,SPI1,PTPRJ,CELF1,CELF1,CELF1 NDUFS3,PTPMT1,CELF1,KBTBD4 NA NA NA NA NDUFS3 10863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 47789923 47790126 47789984 Y NA FNBP4 NA NA NA NA FNBP4 2928 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 48077375 48077584 48077563 Y FNBP4,PTPRJ NA NA NA NA NA PTPRJ 77262 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 57324540 57324747 57324726 Y SLC43A3,SLC43A3,SLC43A3,UBE2L6,SERPING1 SLC43A1,TIMM10,UBE2L6,SERPING1 NA NA NA NA UBE2L6 9010 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 57549936 57550183 57550060 Y NA C11orf31,CTNND1 NA NA NA NA CTNND1 31221 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 58340867 58341571 58341167 Y OR5B21,ZFP91,LPXN,LPXN LPXN,ZFP91,ZFP91-CNTF NA NA NA NA LPXN 2122 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 59582834 59583156 59582993 Y NA MRPL16,TCN1 NA NA NA NA MRPL16 6489 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 60753567 60754105 60753691 Y SDHAF2,CD5,CD6 NA NA NA NA NA TMEM132A 63632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 60934770 60935212 60935096 Y SLC15A3,TMEM138,SDHAF2,CYBASC3,CYBASC3,CPSF7,CPSF7,VPS37C VPS37C VPS37C K562 ChIA-PET 22265404 VPS37C 7681 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 61781118 61781313 61781282 Y DAGLA,FTH1 FTH1 FADS1,BEST1,FTH1,FADS3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FTH1 47986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 62267714 62268111 62267986 Y NA RP11-864I4.4 NA NA NA NA RP11-864I4.4 43360 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 62306762 62307027 62306934 Y WDR74,STX5,NXF1,EML3,AHNAK RP11-864I4.4,AHNAK,EEF1G,MIR3654 NA NA NA NA RP11-864I4.4 4444 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 62310227 62311393 62310863 Y WDR74,UBXN1,STX5,SLC3A2,NXF1,EML3,AHNAK RP11-864I4.4,AHNAK,EEF1G,MIR3654,TUT1 NA NA NA NA RP11-864I4.4 78 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 62312037 62312397 62312245 Y WDR74,UBXN1,STX5,SLC3A2,NXF1,EML3,AHNAK RP11-864I4.4,AHNAK,EEF1G,MIR3654,TUT1 NA NA NA NA RP11-864I4.4 566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 62413039 62413428 62413234 Y NA MTA2,EML3,B3GAT3,GANAB,INTS5,METTL12,SNORA57,C11orf83,C11orf48,UBXN1 NA NA NA NA GANAB 935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 63334518 63335083 63334716 Y RARRES3,OTUB1 RARRES3,HRASLS2,PLA2G16 NA NA NA NA HRASLS2 5663 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 63337722 63338129 63338119 Y NA RARRES3,HRASLS2,PLA2G16 NA NA NA NA HRASLS2 8867 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 64140304 64140795 64140552 Y RCOR2,NAA40,GPR137,KCNK4,NRXN2,NRXN2,CDC42BPG RPS6KA4 NA NA NA NA RPS6KA4 15684 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 64987523 64987676 64987600 Y NA CAPN1,POLA2 NA NA NA NA POLA2 39557 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 65076655 65076852 65076688 Y EHD1,BATF2,FAU,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,CDC42EP2 POLA2,CDC42EP2,DPF2 NA NA NA NA CDC42EP2 3437 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 65185589 65187086 65186338 Y NA FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 1159 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 65187297 65188198 65187553 Y BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 47 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr11 65239550 65239870 65239751 Y BATF2,FAU,CDC42EP2,KCNK7,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 AP000769.1,MALAT1 TIGD3,SCYL1 K562 ChIA-PET 22265404 AP000769.1 18822 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 65244638 65245303 65245021 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 AP000769.1,MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 17930 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr11 65264635 65265953 65265057 Y NA AP000769.1,MALAT1,SCYL1 NA NA NA NA MALAT1 1402 CAGE HCC1806 hg19 FANTOM5 4.94437623479098 chr11 65323331 65323567 65323509 Y FOSL1 SCYL1,LTBP3,SSSCA1,FAM89B,EHBP1L1 NA NA NA NA LTBP3 834 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 65333490 65333816 65333671 Y SLC25A45,SIPA1,SIPA1,EIF1AD,CTSW,PCNXL3 SCYL1,LTBP3,SSSCA1,FAM89B,EHBP1L1,MAP3K11,PCNXL3 NA NA NA NA SSSCA1 2085 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 65419981 65420225 65420142 Y CDC42EP2,TIGD3,SLC25A45,FRMD8,EHBP1L1,KCNK7,MAP3K11,PCNXL3,PACS1,EIF1AD,DKFZp761E198,CTSW,SIPA1,SIPA1,RELA,KAT5 MAP3K11,PCNXL3,SIPA1,RELA NA NA NA NA RELA 8340 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 65666492 65667203 65666864 Y RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B MUS81,CFL1,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1 NA NA NA NA FOSL1 448 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr11 65679250 65679576 65679373 Y RIN1,BRMS1,SCYL1,SSSCA1,PCNXL3,RNASEH2C,CFL1,MUS81,FIBP,CCDC85B,YIF1A,RAB1B,KLC2,KLC2,KLC2,FOSL1,DRAP1,C11orf68,BANF1 FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1 NA NA NA NA C11orf68 5012 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 65683105 65683625 65683322 Y NA FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1 NA NA NA NA C11orf68 963 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr11 67138852 67139479 67139267 Y NA POLD4,RAD9A,PPP1CA NA NA NA NA AP003419.11 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 67139742 67140272 67140082 Y NA POLD4,AP003419.11,RAD9A,PPP1CA NA NA NA NA AP003419.11 687 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 67146992 67147327 67147282 Y NA POLD4,AP003419.11,RAD9A,PPP1CA,RPS6KB2 NA NA NA NA AP003419.11 7937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 67827034 67827402 67827396 Y PPP6R3,ACY3,SUV420H1,CHKA NDUFS8,TCIRG1 NA NA NA NA TCIRG1 22551 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 68147876 68148306 68148095 Y NA NA NA NA NA NA LRP5 69799 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 68387136 68387210 68387173 Y NA NA NA NA NA NA GAL 62037 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 68611298 68611611 68611498 Y NA CPT1A NA NA NA NA CPT1A 1420 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 69067534 69068152 69067999 Y TPCN2 MYEOV NA NA NA NA MYEOV 7929 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 69069522 69069665 69069598 Y TPCN2 MYEOV NA NA NA NA MYEOV 9917 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 69197125 69197542 69197234 Y ORAOV1,MYEOV NA MYEOV,CCND1 IMR90 Hi-C 24141950 MYEOV 137520 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 69235389 69235576 69235517 Y NA NA MYEOV,ORAOV1,CCND1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYEOV 175784 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 69251942 69252241 69252024 Y NA NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYEOV 192337 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 69258094 69258432 69258217 Y CCND1 NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CCND1 195423 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr11 69451342 69451588 69451394 Y NA CCND1,ORAOV1 NA NA NA NA CCND1 2267 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 69453520 69454472 69453912 Y NA ORAOV1 NA NA NA NA CCND1 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 69639961 69640299 69640038 Y NA NA FGF3 K562 ChIA-PET 22265404 FGF19 122551 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 70155804 70155966 70155885 Y PPFIA1 PPFIA1 NA NA NA NA PPFIA1 40998 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 70245269 70246141 70245676 Y ANO1,FADD,PPFIA1,CTTN CTTN,AP000487.5 NA NA NA NA AP000487.5 2675 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 71749092 71749250 71749171 Y NA LRTOMT NA NA NA NA LRTOMT 40132 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 73088357 73088912 73088439 Y NA RELT NA NA NA NA RELT 3048 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 73134039 73134350 73134132 Y RELT,RELT RELT NA NA NA NA RELT 48730 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 73722792 73723138 73723056 Y LIPT2,C2CD3,UCP2 UCP2 UCP2 K562 ChIA-PET 22265404 UCP2 30440 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 74465903 74466299 74466070 Y POLD3,RNF169 RP11-864N7.2,RNF169 XRRA1 IMR90 Hi-C 24141950 RNF169 7990 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr11 74534779 74535147 74534795 Y XRRA1,RNF169 NA NA NA NA NA RNF169 76866 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 74609449 74609745 74609637 Y LOC441617,XRRA1 XRRA1,SPCS2 NA NA NA NA XRRA1 48500 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 74609863 74609988 74609926 Y NA XRRA1,SPCS2 NA NA NA NA XRRA1 48257 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 75051761 75052000 75051847 Y UVRAG,SPCS2,NEU3,DGAT2,ARRB1 ARRB1 NA NA NA NA ARRB1 8873 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 75248214 75248465 75248264 Y UVRAG SERPINH1 GDPD5,RPS3,KLHL35,SERPINH1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SERPINH1 22636 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 76480789 76480971 76480905 Y NA TSKU,RP11-21L23.3 B3GNT6,TSKU,GUCY2E,ACER3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSKU 10324 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr11 76721586 76721786 76721728 Y ACER3 NA NA NA NA NA CAPN5 54193 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 76802149 76802401 76802277 Y NA CAPN5 NA NA NA NA CAPN5 26170 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 77696711 77696891 77696801 Y NA INTS4 C11orf67,RSF1 IMR90 Hi-C 24141950 INTS4 6833 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 77751153 77751354 77751183 Y NA INTS4,KCTD14,NDUFC2-KCTD14,NDUFC2 NA NA NA NA KCTD14 3883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 78002337 78002637 78002489 Y NA NA NA NA NA NA KCTD21 104469 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 78426480 78426845 78426663 Y NA NA NA NA NA NA NARS2 142561 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 82918019 82918384 82918270 Y PCF11,ANKRD42 ANKRD42,RP11-727A23.5,RP11-727A23.1 NA NA NA NA RP11-727A23.1 3663 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 82961020 82961401 82961211 Y NA RP11-727A23.1,CCDC90B NA NA NA NA CCDC90B 34049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 85702937 85703343 85703240 Y NA NA NA NA NA NA PICALM 75581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 86452946 86453377 86453076 Y NA PRSS23 PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 46724 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 86454778 86455149 86454967 Y PRSS23 PRSS23 PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 44952 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 87871692 87871803 87871780 Y NA RAB38 NA NA NA NA RAB38 34832 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 89893119 89893512 89893349 Y NAALAD2 NAALAD2 NA NA NA NA NAALAD2 30436 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 89937153 89937335 89937244 Y NA CHORDC1 NA NA NA NA CHORDC1 17197 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 94336010 94336194 94336103 Y PANX1,ANKRD49,FUT4 NA NA NA NA NA FUT4 60993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 95557234 95557451 95557366 Y NA CEP57,FAM76B NA NA NA NA FAM76B 35661 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr11 95610217 95610530 95610374 Y NA MTMR2 NA NA NA NA MTMR2 45949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 95867848 95868058 95867952 Y FAM76B,MAML2,CCDC82 NA NA NA NA NA MAML2 206286 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 95982466 95982894 95982863 Y NA NA NA NA NA NA MAML2 91450 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 96024131 96024308 96024240 Y NA NA NA NA NA NA MAML2 50036 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 96040167 96040456 96040282 Y MAML2 MAML2 NA NA NA NA MAML2 33888 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr11 101386837 101386845 101386841 Y TRPC6 NA NA NA NA NA TRPC6 354448 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 102042993 102043398 102043047 Y C11orf70,TMEM123,YAP1,YAP1 NA NA NA NA NA YAP1 63801 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr11 102140637 102141105 102140856 Y NA BIRC3 YAP1,BIRC2,MMP20,BIRC3,C11orf70 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BIRC3 45110 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 102175501 102175731 102175600 Y BIRC2 BIRC3,BIRC2 MMP7,BIRC2 IMR90 Hi-C 24141950 BIRC3 10484 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 102283995 102284326 102284226 Y BIRC3,BIRC2,MMP20,TMEM123 NA BIRC2 IMR90 Hi-C 24141950 TMEM123 54789 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 102330262 102330405 102330334 Y NA TMEM123 TMEM123 K562,MCF7 ChIA-PET 22265404 TMEM123 8710 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 103321873 103321933 103321886 Y NA RP11-37O16.8 NA NA NA NA RP11-37O16.8 43488 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 106491098 106491425 106491260 Y NA NA NA NA NA NA KBTBD3 544606 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 109965770 109966113 109965869 Y RDX,FDX1,ZC3H12C ZC3H12C NA NA NA NA ZC3H12C 3683 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 113828537 113828676 113828607 Y NA NA NA NA NA NA USP28 84245 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 114224881 114225192 114225037 Y NA RBM7,C11orf71 FAM55B,REXO2,C11orf71,RBM7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM7 43560 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 114312879 114313299 114312892 Y NA RBM7,C11orf71,REXO2 NA NA NA NA REXO2 4771 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 116723326 116723638 116723620 Y SIK3 NA NA NA NA NA ZNF259 66560 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 118663387 118663780 118663691 Y NA DDX6 NA NA NA NA DDX6 3529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 118747459 118747842 118747737 Y MLL,VPS11,RPS25,CXCR5,CCDC84,CBL,DDX6 MIR4492,UPK2,BCL9L CXCR5 IMR90 Hi-C 24141950 MIR4492 31575 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 118782911 118783378 118783221 Y SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84 MIR4492,UPK2,BCL9L NA NA NA NA MIR4492 3494 CAGE HCC1806 hg19 FANTOM5 7.29884110850097 chr11 118784118 118784508 118784405 Y MLL,DDX6,VPS11,RPS25,CBL,CCDC84 MIR4492,UPK2,BCL9L NA NA NA NA MIR4492 4701 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 118790377 118790895 118790660 Y NA MIR4492,UPK2,BCL9L NA NA NA NA UPK2 2978 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 118791529 118792348 118792152 Y PHLDB1,BCL9L MIR4492,UPK2,BCL9L NA NA NA NA UPK2 1525 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 118793665 118793922 118793750 Y MLL,DDX6,VPS11,RPS25,CCDC84 MIR4492,BCL9L NA NA NA NA UPK2 0 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr11 118800245 118800827 118800413 Y MLL,DDX6,VPS11,RPS25,CBL,C2CD2L,CXCR5,CXCR5,CCDC84 MIR4492,UPK2,BCL9L NA NA NA NA BCL9L 5928 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr11 119454963 119455433 119455083 Y NA NA TRIM29,USP2,LOC100499227 IMR90 Hi-C 24141950 PVRL1 142361 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 119540378 119540644 119540511 Y NA NA NA NA NA NA PVRL1 57150 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 119564027 119564313 119564171 Y TRIM29,PVRL1 PVRL1 NA NA NA NA PVRL1 33481 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 122596029 122596361 122596043 Y NA NA NA NA NA NA UBASH3B 71646 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 122727425 122727730 122727613 Y NA CRTAM NA NA NA NA CRTAM 20217 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 123343327 123343490 123343416 Y BSX AP000783.1 HSPA8,CLMP,MIR4493 IMR90 Hi-C 24141950 AP000783.1 44269 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 123407861 123408201 123408031 Y NA NA NA NA NA NA AP000783.1 108803 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 124458771 124459153 124459140 Y OR8G2,OR8G1,OR8D1,OR8D2,OR8B8,OR8B12,OR8A1 TBRG1 NA NA NA NA TBRG1 31579 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 124638889 124639135 124639012 Y NA NRGN,RP11-677M14.3 NA NA NA NA RP11-677M14.3 11864 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 125937888 125938141 125938004 Y NA CDON,NAP1L1P1 NA NA NA NA NAP1L1P1 2454 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 127391525 127391650 127391576 Y NA NA NA NA NA NA ETS1 1063803 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 128927593 128927968 128927781 Y NA NA NA NA NA NA ARHGAP32 219251 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 129244480 129244782 129244484 Y NA BARX2 NA NA NA NA BARX2 645 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 129695386 129695610 129695527 Y APLP2 TMEM45B NA NA NA NA TMEM45B 11672 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 129716429 129716681 129716540 Y TMEM45B TMEM45B,NFRKB NA NA NA NA TMEM45B 32715 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 129731747 129732130 129731880 Y ST14,NFRKB,TMEM45B TMEM45B,NFRKB NA NA NA NA NFRKB 31355 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr11 131995649 131996509 131995944 Y NTM NA NA NA NA NA SNX19 1211245 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr11 132411283 132411428 132411357 Y NA NA NA NA NA NA SNX19 1626879 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr11 134688539 134688830 134688760 Y NA NA NA NA NA NA GLB1L2 488771 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 1026879 1027238 1027070 Y NA NA NA NA NA NA RAD52 69981 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 1029926 1030313 1030120 Y WNK1 NA NA NA NA NA RAD52 66906 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 1211682 1211803 1211740 Y NA NA NA NA NA NA ERC1 114007 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 1511133 1511360 1511261 Y ERC1 NA NA NA NA NA FBXL14 189971 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 1770869 1771337 1771069 Y LRTM2,ADIPOR2 ADIPOR2 NA NA NA NA ADIPOR2 24403 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 4075551 4075819 4075752 Y NA NA CCND2 IMR90 Hi-C 24141950 PARP11 94943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 4448343 4448720 4448381 Y PARP11,CCND2,C12orf5 C12orf5 NA NA NA NA C12orf5 19972 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 4758958 4759134 4759102 Y NA NDUFA9 NA NA NA NA NDUFA9 2697 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 5915509 5915755 5915702 Y NA NA NA NA NA NA NTF3 376231 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 6325035 6325634 6325452 Y NA CD9 NA NA NA NA CD9 18154 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 6403662 6404056 6403860 Y PLEKHG6,PLEKHG6,PLEKHG6 PLEKHG6,TNFRSF1A VWF,PLEKHG6,TNFRSF1A,CD9,IFFO1,GAPDH,NCAPD2 IMR90 Hi-C 24141950 PLEKHG6 13546 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 6404239 6404667 6404531 Y NA PLEKHG6,TNFRSF1A VWF,PLEKHG6,TNFRSF1A,CD9,IFFO1,GAPDH,NCAPD2 IMR90 Hi-C 24141950 PLEKHG6 12935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 6445143 6445640 6445507 Y VAMP1,TAPBPL,CHD4,CD4,CD4,TNFRSF1A PLEKHG6,TNFRSF1A,LTBR,SCNN1A NA NA NA NA TNFRSF1A 3640 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 6663248 6663743 6663420 Y GPR162,ENO2,C12orf53,VAMP1,IFFO1 SCARNA10,GAPDH,NOP2 NA NA NA NA NOP2 12114 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 6717352 6717716 6717682 Y SCNN1A,SCNN1A,PTPN6,LRRC23,ATN1,CHD4,ACRBP NOP2,CHD4,LPAR5 NA NA NA NA CHD4 2710 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 6962211 6962407 6962304 Y GAPDH,COPS7A,COPS7A,COPS7A,COPS7A,LEPREL2,USP5,USP5,TPI1,TPI1 GPR162,LEPREL2,CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2 NA NA NA NA USP5 2919 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 7000184 7000641 7000294 Y PEX5,VAMP1,ACRBP,CD4,CD4,PTPN6 CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2,ENO2,ATN1,C12orf57 NA NA NA NA SPSB2 3662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 7058563 7058923 7058712 Y PEX5,VAMP1,CD4,CD4,PTPN6 ENO2,ATN1,C12orf57,RNU7-1,EMG1,U47924.27,PHB2,C1S NA NA NA NA RNU7-1 7584 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 7104040 7104360 7104246 Y NA EMG1,U47924.27,PHB2,C1S,LPCAT3 NA NA NA NA C1S 9689 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 7592182 7592797 7592685 Y PEX5,NANOG RP11-157G21.2,CD163L1 NA NA NA NA RP11-157G21.2 1596 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 8123169 8123746 8123395 Y CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC2A3 36298 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 9367295 9367562 9367429 Y NA PTMAP4 NA NA NA NA PTMAP4 23365 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 9966772 9967089 9966969 Y KLRB1,CD69,KLRD1,KLRD1,KLRF2,KLRF1,CLEC2B NA NA NA NA NA CLEC2B 53646 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 9982493 9982805 9982658 Y KLRB1,CD69,KLRD1,KLRD1,KLRF1 CLEC2B NA NA NA NA CLEC2B 37930 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 10515405 10515669 10515567 Y NA RP11-277P12.20 NA NA NA NA RP11-277P12.20 1037 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 10517487 10517775 10517755 Y NA RP11-277P12.20 NA NA NA NA RP11-277P12.20 3119 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 10869298 10869573 10869459 Y NA STYK1 NA NA NA NA STYK1 44381 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 11919566 11919967 11919675 Y BCL2L14,ETV6 NA NA NA NA NA ETV6 118778 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 11951921 11952163 11952067 Y ETV6 NA NA NA NA NA ETV6 151133 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 12255233 12255559 12255327 Y BCL2L14 RP11-267J23.4 NA NA NA NA RP11-267J23.4 6538 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 12956264 12956405 12956396 Y GPRC5A,DDX47 DDX47 NA NA NA NA DDX47 7845 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 12957478 12957757 12957559 Y GPRC5A DDX47 NA NA NA NA DDX47 6493 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 13025126 13025347 13025203 Y NA RPL13AP20,GPRC5A,MIR614 NA NA NA NA RPL13AP20 1086 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 13049170 13049423 13049295 Y DUSP16 RPL13AP20,GPRC5A,MIR614,RP11-392P7.6 NA NA NA NA GPRC5A 7454 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 13252845 13253278 13252954 Y EMP1 NA NA NA NA NA KIAA1467 57627 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 13253893 13254547 13254171 Y CDKN1B,EMP1 NA NA NA NA NA KIAA1467 58675 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr12 13277970 13278212 13278173 Y EMP1 NA EMP1,GSG1 IMR90 Hi-C 24141950 EMP1 69438 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 13320198 13320450 13320349 Y NA EMP1 APOLD1,HTR7P1,EMP1 IMR90 Hi-C 24141950 EMP1 27200 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 13326583 13326856 13326645 Y EMP1 EMP1 HTR7P1,EMP1,HEBP1,KIAA1467,GSG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EMP1 20794 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 13376628 13377027 13376828 Y NA EMP1 NA NA NA NA EMP1 28978 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 14426552 14426694 14426609 Y PLBD1,ATF7IP NA NA NA NA NA ATF7IP 89916 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 15105208 15105676 15105381 Y WBP11,ARHGDIB ERP27,ARHGDIB NA NA NA NA ARHGDIB 6986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 15899366 15899730 15899546 Y PTPRO NA NA NA NA NA EPS8 133533 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 19048962 19049238 19049131 Y NA NA PIK3C2G IMR90 Hi-C 24141950 PLEKHA5 231410 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 19557871 19558201 19558036 Y NA AEBP2 AEBP2 IMR90 Hi-C 24141950 AEBP2 2892 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 19566135 19566181 19566158 Y NA AEBP2 NA NA NA NA AEBP2 11156 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 19842357 19842456 19842392 Y NA RNU1-146P NA NA NA NA RNU1-146P 32913 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr12 20950319 20950359 20950339 Y NA NA NA NA NA NA PYROXD1 638190 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 20959036 20959191 20959158 Y NA NA NA NA NA NA PYROXD1 629358 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 20975224 20975562 20975349 Y NA NA NA NA NA NA PYROXD1 612987 CAGE HCC1806 hg19 FANTOM5 9.18241300746896 chr12 21666002 21666378 21666190 Y NA RECQL,GOLT1B,C12orf39 NA NA NA NA C12orf39 10863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 22654594 22654831 22654713 Y NA NA NA NA NA NA ETNK1 121178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 22779557 22779668 22779574 Y NA ETNK1 NA NA NA NA ETNK1 3548 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 24816913 24817959 24817288 Y BCAT1 NA NA NA NA NA BCAT1 282434 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 25058340 25058627 25058484 Y BCAT1 BCAT1 NA NA NA NA BCAT1 41766 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 25538390 25538869 25538521 Y NA NA BCAT1,LYRM5,CASC1,KRAS,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 136520 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 25539082 25539407 25539207 Y NA NA BCAT1,LYRM5,CASC1,KRAS,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 137212 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr12 26267263 26267811 26267415 Y NA SSPN,BHLHE41,RP11-283G6.3 NA NA NA NA SSPN 5113 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27484254 27484540 27484416 Y FGFR1OP2,STK38L ARNTL2 NA NA NA NA ARNTL2 467 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr12 27497251 27497478 27497364 Y MED21,ARNTL2 ARNTL2 NA NA NA NA ARNTL2 13464 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 27513734 27513812 27513790 Y NA ARNTL2 NA NA NA NA ARNTL2 29947 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27532512 27532752 27532665 Y C12orf71 ARNTL2 NA NA NA NA ARNTL2 48725 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27593588 27593602 27593594 Y C12orf71 NA NA NA NA NA PPFIBP1 80762 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27678444 27678624 27678473 Y PPFIBP1 PPFIBP1 NA NA NA NA PPFIBP1 4080 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27702695 27702969 27702865 Y NA PPFIBP1 NA NA NA NA PPFIBP1 28331 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27745630 27745707 27745691 Y NA NA NA NA NA NA PPFIBP1 71266 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 27746027 27746077 27746069 Y NA NA NA NA NA NA PPFIBP1 71663 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 27975028 27975451 27975289 Y NA NA NA NA NA NA MRPS35 113322 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 28126453 28126843 28126791 Y PTHLH,PTHLH PTHLH NA NA NA NA PTHLH 2815 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 28127967 28128359 28128243 Y PTHLH,PTHLH PTHLH NA NA NA NA PTHLH 4329 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr12 28128658 28128812 28128736 Y MANSC4,PTHLH,PTHLH PTHLH NA NA NA NA PTHLH 5020 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 28176067 28176342 28176190 Y PTHLH,PTHLH NA PTHLH IMR90 Hi-C 24141950 PTHLH 52429 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 28179755 28179885 28179817 Y PTHLH,PTHLH NA PTHLH IMR90 Hi-C 24141950 PTHLH 56117 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 28186002 28186387 28186254 Y PTHLH,PTHLH NA NA NA NA NA PTHLH 62364 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 28275745 28275985 28275876 Y NA CCDC91 PTHLH IMR90 Hi-C 24141950 CCDC91 8197 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 28283625 28284072 28283761 Y PTHLH,PTHLH CCDC91 PTHLH IMR90 Hi-C 24141950 CCDC91 110 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 29317763 29317994 29317897 Y NA FAR2 NA NA NA NA FAR2 17727 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 29489399 29489493 29489486 Y NA ERGIC2 NA NA NA NA ERGIC2 42629 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 29601520 29601624 29601572 Y NA NA NA NA NA NA OVCH1-AS1 61293 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 30945631 30945953 30945771 Y NA CAPRIN2,RP11-77I22.2,LINC00941 NA NA NA NA LINC00941 24 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 30949517 30949896 30949519 Y CAPRIN2 CAPRIN2,RP11-77I22.2,LINC00941 NA NA NA NA LINC00941 3540 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 31469690 31470116 31469962 Y NA FAM60A NA NA NA NA FAM60A 7876 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 31523025 31523181 31523129 Y METTL20,FAM60A,FAM60A FAM60A NA NA NA NA FAM60A 45033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 31602301 31602617 31602553 Y NA NA NA NA NA NA FAM60A 124309 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 31804886 31805136 31805063 Y NA METTL20 NA NA NA NA METTL20 6792 CAGE HCC1806 hg19 FANTOM5 8.47607354535597 chr12 31902136 31902566 31902240 Y C12orf35,AMN1,H3F3C AMN1,H3F3C AMN1 K562 ChIA-PET 22265404 AMN1 22028 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 31972530 31972632 31972576 Y NA H3F3C NA NA NA NA H3F3C 29355 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 32263319 32263494 32263407 Y NA BICD1 NA NA NA NA BICD1 5550 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 32380941 32381343 32381040 Y NA NA NA NA NA NA BICD1 123172 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 33044985 33045279 33045082 Y NA PKP2 NA NA NA NA PKP2 2495 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 33137070 33137259 33137186 Y PKP2 NA NA NA NA NA PKP2 89296 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 33741113 33741380 33741221 Y NA NA SYT10,YARS2 MCF7,K562 ChIA-PET 22265404 SYT10 150359 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 38493611 38493806 38493706 Y NA NA NA NA NA NA ALG10B 214574 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 39104065 39104215 39104143 Y CPNE8 NA NA NA NA NA CPNE8 195017 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 39816699 39816988 39816844 Y NA KIF21A NA NA NA NA KIF21A 18204 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 42734111 42734478 42734288 Y NA ZCRB1 NA NA NA NA ZCRB1 16191 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 42825856 42826146 42826103 Y YAF2,YAF2,YAF2 NA NA NA NA NA ZCRB1 107936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 44522730 44522871 44522801 Y NA NA NA NA NA NA TMEM117 294960 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 45626822 45627300 45627014 Y ANO6,ANO6 ANO6,PLEKHA8P1 NA NA NA NA PLEKHA8P1 18998 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46614251 46614418 46614333 Y NA SLC38A1 NA NA NA NA SLC38A1 47382 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 46636369 46636708 46636589 Y SCAF11,SLC38A1 SLC38A1 NA NA NA NA SLC38A1 25092 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46804431 46804731 46804468 Y NA SLC38A2,RP11-96H19.1 SLC38A4 IMR90 Hi-C 24141950 RP11-96H19.1 28969 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46888080 46888552 46888358 Y NA NA SLC38A2,SLC38A4,SLC38A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-96H19.1 112618 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46917975 46918280 46918143 Y NA NA SLC38A2,SLC38A4,SLC38A1,AMIGO2 IMR90 Hi-C 24141950 RP11-96H19.1 142513 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46942703 46943018 46942760 Y NA NA SLC38A2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-96H19.1 167241 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46943558 46944140 46943794 Y SLC38A2 NA SLC38A2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-96H19.1 168096 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46947043 46947401 46947166 Y SLC38A2 NA SLC38A2 IMR90 Hi-C 24141950 RP11-96H19.1 171581 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 46951455 46951753 46951519 Y SLC38A2 NA SLC38A2 IMR90 Hi-C 24141950 RP11-96H19.1 175993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46953166 46953383 46953275 Y NA NA SLC38A2 IMR90 Hi-C 24141950 RP11-96H19.1 177704 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 46956105 46956322 46956188 Y NA NA SLC38A2 IMR90 Hi-C 24141950 RP11-96H19.1 180643 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47058808 47059020 47058972 Y SLC38A2 NA SLC38A2,SLC38A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-96H19.1 283346 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47474423 47475249 47474825 Y NA AMIGO2 NA NA NA NA AMIGO2 2689 CAGE HCC1806 hg19 FANTOM5 4.47348326004898 chr12 47583701 47583845 47583774 Y NA NA NA NA NA NA AMIGO2 111967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47601157 47601488 47601298 Y FAM113B NA NA NA NA NA AMIGO2 129423 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47612205 47612473 47612375 Y FAM113B NA NA NA NA NA AMIGO2 140471 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47616513 47616764 47616594 Y NA NA NA NA NA NA AMIGO2 144779 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47661403 47661671 47661594 Y NA NA FAM113B,AMIGO2 IMR90 Hi-C 24141950 AMIGO2 189669 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 47670448 47670925 47670783 Y NA NA AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMIGO2 198714 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 48282882 48283045 48282955 Y ZNF641,ZNF641,ASB8,VDR NA NA NA NA NA VDR 51786 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 49370069 49370445 49370342 Y NA ARF3,RP11-386G11.5,PRKAG1 NA NA NA NA RP11-386G11.5 19705 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 49595765 49596022 49595888 Y LMBR1L TUBA1C,TUBA1A TUBA1A,TUBA1B MCF7,K562 ChIA-PET 22265404 TUBA1A 14658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 49641026 49641246 49641136 Y NA NA RHEBL1,TUBA1C,TUBA1A,LMBR1L,DHH,MLL2,TUBA1B,SPATS2,MCRS1,FAM186B,PRPH IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1A 59919 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 50092738 50092974 50092805 Y AQP2,FMNL3 TMBIM6,FMNL3 NA NA NA NA TMBIM6 6534 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 50555629 50555991 50555816 Y ACCN2,DIP2B CERS5 NA NA NA NA CERS5 3297 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 50931365 50931732 50931390 Y NA DIP2B NA NA NA NA DIP2B 34597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 50936330 50936621 50936410 Y DIP2B DIP2B NA NA NA NA DIP2B 39562 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 52364914 52365223 52365052 Y GRASP ACVR1B,GRASP,NR4A1 NA NA NA NA ACVR1B 21463 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 52426547 52427164 52426822 Y NR4A1,ACVR1B,ACVR1B,GRASP GRASP,NR4A1,C12orf44 NA NA NA NA NR4A1 11931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 52525424 52525587 52525584 Y NA NA NA NA NA NA KRT80 58197 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 52539319 52539712 52539621 Y KRT84,KRT80,KRT6A,KRT5 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 44072 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr12 52540964 52541526 52541224 Y KRT80,KRT7,KRT6A,KRT5,NR4A1,C12orf44 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 42258 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr12 52542210 52542726 52542513 Y KRT80,KRT7,KRT6B,KRT6A,KRT5,C12orf44 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 41058 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 52557711 52558022 52557822 Y NA KRT80 NA NA NA NA KRT80 25762 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr12 52624014 52624394 52624158 Y KRT7 KRT80 NA NA NA NA KRT7 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 52674043 52674518 52674247 Y NR4A1,C12orf44,KRT84,KRT6A,KRT5,KRT80 KRT7 NA NA NA NA KRT7 49739 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 52674655 52675081 52674843 Y C12orf44,KRT80,KRT7 NA NA NA NA NA KRT7 50351 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 52973884 52973999 52973956 Y NA NA NA NA NA NA KRT5 61413 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 53267781 53268340 53268093 Y PFDN5 NA KRT18,KRT8,LOC283403,EIF4B,KRT80,LOC283404 MCF7 ChIA-PET 22265404 KRT4 61446 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 53312254 53312405 53312393 Y NA KRT18,KRT8 NA NA NA NA KRT18 28250 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 53615195 53615822 53615501 Y CSAD,SP1,PRR13,PFDN5 ZNF740,CSAD,ITGB7,MFSD5,ESPL1 NA NA NA NA ITGB7 16104 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 54090300 54090537 54090319 Y NA ATP5G2,CALCOCO1 NA NA NA NA ATP5G2 21108 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 54133160 54133497 54133297 Y ATF7,ATP5G2 CALCOCO1 ATF7,ATP5G2,CALCOCO1,CBX5 IMR90 Hi-C 24141950 CALCOCO1 13631 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 54416528 54417002 54416575 Y NA HOXC10,HOXC-AS3,HOXC6,HOXC9,HOXC-AS1,HOXC5,HOXC4 NA NA NA NA HOXC5 7635 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 54563652 54563918 54563802 Y NA SMUG1 NA NA NA NA SMUG1 16860 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 54770417 54770796 54770608 Y NA ITGA5 NA NA NA NA ITGA5 40448 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 55807914 55808439 55808095 Y NA NA NA NA NA NA METTL7B 264891 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 56294124 56294208 56294164 Y NA DGKA,WIBG NA NA NA NA DGKA 24895 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 56831514 56831759 56831654 Y IKZF4 TIMELESS,SPRYD4,GLS2 NA NA NA NA TIMELESS 9428 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 57028610 57029302 57028864 Y NA BAZ2A,ATP5B NA NA NA NA BAZ2A 10 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr12 58281637 58282038 58281777 Y CDK4,METTL1,METTL21B,TSFM CTDSP2,RP11-620J15.3 CTDSP2,TSFM,AVIL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTDSP2 43115 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 58349067 58349080 58349075 Y XRCC6BP1 RP11-620J15.3,XRCC6BP1 NA NA NA NA XRCC6BP1 15743 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 62712963 62713140 62713056 Y C12orf61,MON2,USP15 FAM19A2 NA NA NA NA FAM19A2 42032 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 63051832 63051994 63051914 Y MON2,PPM1H NA NA NA NA NA C12orf61 56618 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 63118880 63119001 63118911 Y NA NA NA NA NA NA C12orf61 123666 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 64544712 64545066 64544890 Y SRGAP1 NA NA NA NA NA C12orf66 69010 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 65019058 65019979 65019210 Y TBK1,RASSF3,GNS RASSF3 NA NA NA NA RASSF3 16765 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 65026482 65026674 65026578 Y NA RASSF3 NA NA NA NA RASSF3 24189 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 65093624 65093852 65093697 Y NA NA NA NA NA NA GNS 57375 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 65262498 65262651 65262575 Y NA NA NA NA NA NA GNS 111271 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 66027921 66028196 66028033 Y NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 187715 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 66042799 66043321 66043056 Y NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 172590 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 66135126 66135637 66135353 Y HMGA2 NA NA NA NA NA HMGA2 80274 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 66286698 66286979 66286899 Y IRAK3 NA NA NA NA NA RPSAP52 67944 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 66628292 66629290 66628922 Y TMBIM4,IRAK3,HELB RBMS1P1 NA NA NA NA RBMS1P1 1278 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 68221654 68222227 68222103 Y NA NA DYRK2 IMR90 Hi-C 24141950 DYRK2 181536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 68314351 68314796 68314502 Y NA NA NA NA NA NA DYRK2 274233 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 69036661 69037118 69036873 Y NA RAP1B,RP11-254B13.3,NUP107 NA NA NA NA RP11-254B13.3 1888 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 69634325 69634686 69634559 Y SLC35E3,MDM2,YEATS4,RAB3IP,RAB3IP,FRS2,CCT2,CCT2,CPSF6 CPSF6 NA NA NA NA CPSF6 3008 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 71037443 71037574 71037509 Y PTPRR,KCNMB4 NA NA NA NA NA RP11-588H23.3 177583 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 71127373 71127661 71127517 Y NA NA NA NA NA NA RP11-588H23.3 267513 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 72125908 72126059 72125950 Y NA TMEM19,RAB21 NA NA NA NA RAB21 20595 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 72691947 72692219 72692098 Y TPH2,TRHDE TRHDE-AS1 NA NA NA NA TRHDE-AS1 25260 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 75946648 75946656 75946652 Y NA KRR1 OSBPL8,NAP1L1,PHLDA1 IMR90 Hi-C 24141950 KRR1 43232 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 75983166 75983173 75983170 Y NA NA PHLDA1,OSBPL8,NAP1L1 IMR90 Hi-C 24141950 KRR1 79750 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr12 76034915 76034997 76034960 Y NA NA PHLDA1 IMR90 Hi-C 24141950 KRR1 131499 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 76061758 76061867 76061813 Y NA NA PHLDA1,OSBPL8 IMR90 Hi-C 24141950 KRR1 158342 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76153718 76154163 76153855 Y NA NA PHLDA1,KRR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-114H23.1 221632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76178520 76178723 76178659 Y NA NA PHLDA1,KRR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-114H23.1 197072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76197528 76197897 76197766 Y KRR1 NA KRR1,PHLDA1 IMR90 Hi-C 24141950 RP11-114H23.1 177898 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 76206207 76206725 76206399 Y GLIPR1 NA NA NA NA NA RP11-114H23.1 169070 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 76209246 76209451 76209339 Y NA NA PHLDA1,NAP1L1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-114H23.1 166344 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 76214541 76214932 76214815 Y PHLDA1 NA PHLDA1,NAP1L1,KRR1,GLIPR1,OSBPL8 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-114H23.1 160863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76215246 76215339 76215312 Y NA NA PHLDA1,NAP1L1,KRR1,GLIPR1,OSBPL8 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-114H23.1 160456 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 76219425 76219952 76219684 Y PHLDA1 NA PHLDA1,NAP1L1 IMR90 Hi-C 24141950 RP11-114H23.1 155843 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 76272060 76272354 76272328 Y PHLDA1 NA NA NA NA NA RP11-114H23.1 103441 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76375899 76376264 76376114 Y NA RP11-114H23.1,PHLDA1 PHLDA1,KRR1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-114H23.1 104 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76414095 76414311 76414227 Y NA RP11-114H23.1,PHLDA1 NA NA NA NA PHLDA1 11401 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 76849053 76849336 76849202 Y OSBPL8 NA NA NA NA NA OSBPL8 102253 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 77456593 77456922 77456786 Y E2F7 E2F7 NA NA NA NA E2F7 438 CAGE HCC1806 hg19 FANTOM5 3.76714379793599 chr12 78544842 78545234 78545038 Y NA NA NA NA NA NA NAV3 322157 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 79325321 79325633 79325477 Y SYT1 NA NA NA NA NA RP1-78O14.1 569543 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 80219716 80220141 80220058 Y NA NA NA NA NA NA RP11-84G21.1 106540 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 83082881 83083305 83083086 Y NA TMTC2 NA NA NA NA TMTC2 4222 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 83157091 83157416 83157138 Y NA NA NA NA NA NA TMTC2 78432 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 83422828 83423206 83423017 Y NA NA NA NA NA NA RPL6P25 119904 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 86995053 86995240 86995159 Y NA NA NA NA NA NA NTS 728980 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 87554185 87554198 87554192 Y NA NA NA NA NA NA C12orf29 871425 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 87724582 87724754 87724682 Y NA NA NA NA NA NA C12orf29 700869 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr12 88064249 88064502 88064338 Y NA NA NA NA NA NA C12orf29 361121 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr12 88968059 88968366 88968242 Y NA KITLG NA NA NA NA KITLG 4262 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 90353904 90354400 90354158 Y ATP2B1 NA ATP2B1,LOC338758,C12orf37 IMR90 Hi-C 24141950 ATP2B1 252827 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 92517978 92518398 92518142 Y BTG1 BTG1 NA NA NA NA BTG1 19275 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 93709037 93709216 93709174 Y NA NA NA NA NA NA NUDT4 60443 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 93890331 93890756 93890540 Y NA MRPL42 NA NA NA NA MRPL42 31067 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 94817703 94818348 94818256 Y NA RBMS2P1,CCDC41 NA NA NA NA RBMS2P1 958 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 95012768 95013068 95012914 Y PLXNC1,TMCC3 TMCC3 NA NA NA NA TMCC3 29270 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 95594660 95595399 95595279 Y FGD6 FGD6,VEZT NA NA NA NA FGD6 13859 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 95680646 95681018 95680718 Y NA NA NA NA NA NA VEZT 71124 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 96027120 96027372 96027186 Y LTA4H NA NTN4 IMR90 Hi-C 24141950 USP44 83854 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 96613519 96613922 96613765 Y NA ELK3 NA NA NA NA ELK3 27359 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 96649758 96650321 96650168 Y ELK3,CDK17 NA NA NA NA NA ELK3 63598 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 96659033 96659395 96659303 Y NA NA NA NA NA NA ELK3 72873 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 96794959 96795305 96795211 Y CDK17 CDK17 NA NA NA NA CDK17 2621 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 101692271 101692665 101692300 Y NA UTP20 NA NA NA NA UTP20 20384 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 102187051 102187461 102187342 Y DRAM1,GNPTAB GNPTAB NA NA NA NA GNPTAB 35255 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 102909608 102909974 102909790 Y PAH NA NA NA NA NA NUP37 397706 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 104301376 104301628 104301530 Y NA HSP90B1 NA NA NA NA HSP90B1 20257 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr12 104330398 104330552 104330475 Y NA HSP90B1,C12orf73,TDG NA NA NA NA HSP90B1 8513 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 104613868 104614024 104613970 Y CHST11,TXNRD1,TXNRD1 TXNRD1,RPL18AP3 NA NA NA NA TXNRD1 6311 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 104693849 104694220 104693862 Y NA RPL18AP3,RP11-818F20.5 NA NA NA NA RP11-818F20.5 21349 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 104791559 104791875 104791716 Y TXNRD1 NA CHST11,SLC41A2,C12orf45 IMR90 Hi-C 24141950 CHST11 55198 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 106328094 106328476 106328238 Y CKAP4 NA NUAK1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NUAK1 203335 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 107856980 107857227 107857220 Y NA NA NA NA NA NA BTBD11 146790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 108054058 108054330 108054150 Y NA PWP1 NA NA NA NA PWP1 23179 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr12 108054666 108054768 108054732 Y NA PWP1 NA NA NA NA PWP1 22741 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 108297283 108297694 108297638 Y NA NA NA NA NA NA PRDM4 144234 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 109120887 109121218 109121134 Y NA CORO1C NA NA NA NA CORO1C 2154 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 109232143 109232504 109232328 Y FICD,SELPLG,CORO1C,SSH1 SSH1 NA NA NA NA SSH1 16862 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 109248007 109248657 109248411 Y SELPLG,CORO1C,SSH1 SSH1 NA NA NA NA SSH1 709 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 109249958 109250678 109250397 Y NA SSH1 NA NA NA NA SSH1 592 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 109900309 109900503 109900403 Y KCTD10 UBE3B,KCTD10 NA NA NA NA UBE3B 12704 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 110867136 110867499 110867318 Y NA ANAPC7,HMGA1P3,ARPC3,RPL31P49,GPN3 NA NA NA NA HMGA1P3 1049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 110931784 110931990 110931887 Y NA ARPC3,RPL31P49,GPN3,VPS29 NA NA NA NA VPS29 5932 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 111016111 111016444 111016311 Y PPTC7,ARPC3 PPTC7,TCTN1 NA NA NA NA PPTC7 2681 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 111867956 111868269 111868101 Y BRAP,SH2B3 SH2B3 NA NA NA NA SH2B3 26204 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 112018937 112019235 112019073 Y NA ATXN2 NA NA NA NA ATXN2 16245 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 112464061 112464211 112464136 Y NA TMEM116,ERP29 NA NA NA NA ERP29 14941 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 112529504 112529724 112529616 Y NA NAA25,TRAFD1 NA NA NA NA NAA25 15102 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 112545862 112545946 112545885 Y NA NAA25,TRAFD1 NA NA NA NA NAA25 1036 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 112759768 112760224 112759930 Y NA NA NA NA NA NA PTPN11 93931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 113417200 113417385 113417312 Y OAS1,OAS3,SLC24A6,SDSL,OAS2 OAS3,OAS2 NA NA NA NA OAS2 3000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 113660919 113661318 113661188 Y TPCN1 DDX54,TPCN1,IQCD NA NA NA NA IQCD 4020 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 113858388 113858513 113858435 Y SLC24A6,SDSL NA NA NA NA NA PLBD2 64017 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 114029271 114029455 114029396 Y LHX5 NA RBM19 IMR90 Hi-C 24141950 RP11-438N16.1 180033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 114200256 114200532 114200390 Y NA RP11-438N16.1 NA NA NA NA RP11-438N16.1 8956 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 115103963 115104215 115104201 Y TBX3 TBX3 NA NA NA NA TBX3 15754 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 116362516 116362609 116362584 Y MED13L NA NA NA NA NA MED13L 350534 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 116701070 116701373 116701314 Y MAP1LC3B2,MED13L MED13L NA NA NA NA MED13L 11770 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 116864232 116864472 116864363 Y NA NA NA NA NA NA RP11-148B3.1 89191 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 116893494 116893818 116893640 Y MED13L,MAP1LC3B2 NA MED13L,LINC00173,MAP1LC3B2,MIR4472-2,C12orf49 IMR90 Hi-C 24141950 RP11-148B3.1 59845 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 116928717 116928987 116928846 Y MED13L,MAP1LC3B2 RP11-148B3.1,LINC00173 MED13L,LINC00173,MAP1LC3B2,MIR4472-2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-148B3.1 24676 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 118263351 118263381 118263366 Y NA NA NA NA NA NA RFC5 186012 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 118497379 118497776 118497426 Y NA RFC5,WSB2 NA NA NA NA WSB2 459 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 118632324 118632442 118632383 Y NA RPS2P5 PEBP1 IMR90 Hi-C 24141950 RPS2P5 49435 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 120668258 120668871 120668569 Y RAB35,DYNLL1,GCN1L1,RPLP0,PXN GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1 NA NA NA NA PXN-AS1 31164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 120669025 120669761 120669334 Y RAB35,RNF10,PXN GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1 NA NA NA NA PXN 31813 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 120672500 120673016 120672699 Y PXN GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1 NA NA NA NA PXN 28558 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 120700086 120700381 120700233 Y RAB35,PXN,PXN PXN,NME2P1,RNU4-2,RNU4-1 NA NA NA NA PXN 1193 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 120956227 120956384 120956265 Y COQ5 RNF10,COQ5 NA NA NA NA RNF10 12899 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 121714857 121715111 121714996 Y OASL,P2RX7,P2RX4,CAMKK2 CAMKK2 NA NA NA NA CAMKK2 19000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 121838748 121839039 121838846 Y SETD1B,RHOF,ORAI1,KDM2B,RNF34 ANAPC5,RNF34 NA NA NA NA RNF34 2904 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 121839154 121839422 121839290 Y C12orf43,RHOF,KDM2B,RNF34 ANAPC5,RNF34 NA NA NA NA RNF34 3310 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 121864200 121864449 121864234 Y NA ANAPC5,RNF34 NA NA NA NA RNF34 28356 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 122020162 122020238 122020212 Y RNF34,SETD1B,ORAI1,KDM2B,KDM2B KDM2B,ORAI1 NA NA NA NA KDM2B 3242 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 122224293 122224471 122224351 Y CAMKK2,KDM2B,ORAI1,MLXIP,SETD1B,RHOF RHOF,AC084018.1,SETD1B NA NA NA NA RHOF 14838 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 122518432 122518585 122518507 Y MLXIP AC156455.1,MLXIP NA NA NA NA MLXIP 3804 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 122897459 122897572 122897541 Y NA CLIP1 NA NA NA NA CLIP1 7607 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 122908043 122908483 122908329 Y ZCCHC8,DENR,CLIP1 CLIP1 NA NA NA NA CLIP1 2864 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr12 123320749 123321200 123320858 Y NA HIP1R NA NA NA NA HIP1R 3749 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 123362987 123363145 123363088 Y NA HIP1R,VPS37B NA NA NA NA VPS37B 15846 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 123930588 123930862 123930771 Y RILPL2 RILPL2,SNRNP35 SNRNP35,SBNO1,SETD8,RILPL1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SNRNP35 9326 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr12 123963389 123963624 123963440 Y RILPL1 RILPL2,SNRNP35 NA NA NA NA SNRNP35 23201 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 124907545 124908050 124907792 Y NA NA NA NA NA NA CCDC92 452167 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125003619 125003834 125003727 Y NA NA NA NA NA NA SCARB1 361380 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125008756 125009019 125008888 Y NA NA NA NA NA NA SCARB1 356195 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125027797 125027993 125027883 Y UBC,NCOR2 NA NA NA NA NA SCARB1 337221 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125030186 125030255 125030224 Y UBC,NCOR2 NA NA NA NA NA SCARB1 334959 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125050856 125051375 125051213 Y UBC,NCOR2 NA NA NA NA NA SCARB1 313839 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 125117108 125117622 125117163 Y NCOR2 NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 SCARB1 247592 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr12 125198204 125198603 125198442 Y NCOR2,UBC NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 SCARB1 166611 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr12 125204801 125205082 125204928 Y UBC NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 SCARB1 160132 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125221717 125221873 125221796 Y NCOR2,UBC NA NCOR2 IMR90 Hi-C 24141950 SCARB1 143341 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125225235 125225448 125225342 Y NCOR2,UBC NA NCOR2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SCARB1 139766 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125346086 125346324 125346188 Y NA SCARB1 NA NA NA NA SCARB1 18890 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125353523 125353887 125353860 Y NA SCARB1,UBC NA NA NA NA SCARB1 11327 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125400956 125401141 125401046 Y UBC SCARB1,UBC NA NA NA NA UBC 1042 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 125403508 125403991 125403767 Y UBC SCARB1,UBC NCOR2,SCARB1,UBC IMR90 Hi-C 24141950 UBC 3594 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125404545 125404922 125404790 Y UBC SCARB1,UBC NCOR2,SCARB1,UBC IMR90 Hi-C 24141950 UBC 4631 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr12 125405622 125405939 125405923 Y UBC SCARB1,UBC NCOR2,SCARB1,UBC IMR90 Hi-C 24141950 UBC 5708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 125424077 125424667 125424516 Y NA UBC,DHX37 UBC IMR90 Hi-C 24141950 UBC 24163 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr12 125550830 125551017 125550923 Y NA AACS NA NA NA NA AACS 2905 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 127567979 127568114 127568034 Y NA RP11-575F12.1 NA NA NA NA RP11-575F12.1 25033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 127610420 127610860 127610670 Y NA RP11-575F12.2,AC079949.1 NA NA NA NA RP11-575F12.2 18217 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 128055090 128055285 128055188 Y NA NA NA NA NA NA AC079949.1 406418 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 131513179 131513358 131513281 Y GPR133 RP11-76C10.5 NA NA NA NA RP11-76C10.5 36658 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr12 132014283 132014643 132014520 Y NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 178983 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 132293483 132293821 132293495 Y NA MMP17 NA NA NA NA MMP17 17117 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr12 132558778 132559145 132558825 Y NA SNORA49,EP400NL NA NA NA NA EP400NL 7683 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 132861217 132861370 132861294 Y P2RX2,GALNT9 NA NA NA NA NA RP13-977J11.2 188977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr12 133688468 133688629 133688567 Y NA ZNF140,ZNF891,ZNF10,ZNF268 NA NA NA NA ZNF891 16430 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 20137811 20138146 20137910 Y NA NA NA NA NA NA MPHOSPH8 67642 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 20693405 20693544 20693484 Y CRYL1 GJA3 NA NA NA NA GJA3 39644 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr13 22009901 22010336 22010211 Y NA ZDHHC20 NA NA NA NA ZDHHC20 21173 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 22135396 22135683 22135678 Y EFHA1 NA NA NA NA NA RPS7P10 65471 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 22688764 22689136 22688963 Y NA NA NA NA NA NA RPS7P10 487610 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 24289001 24289462 24289192 Y PCOTH NA NA NA NA NA MIPEP 172096 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 24528296 24528692 24528455 Y PCOTH NA SPATA13,TNFRSF19 IMR90 Hi-C 24141950 MIPEP 66738 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 24697003 24697328 24697264 Y NA NA SPATA13 IMR90 Hi-C 24141950 MIPEP 235445 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 25880585 25880813 25880618 Y MTMR6,NUPL1 MTMR6,NUPL1 NA NA NA NA NUPL1 6923 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 27734553 27734882 27734861 Y NA USP12 NA NA NA NA USP12 9151 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 28025291 28025563 28025486 Y NA GTF3A,MTIF3 NA NA NA NA MTIF3 2552 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 28167075 28167372 28167253 Y NA LNX2,POLR1D NA NA NA NA LNX2 25169 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 28534904 28535178 28535096 Y LNX2,FLT3,PRHOXNB CDX2 NA NA NA NA CDX2 8098 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 32539898 32540079 32539992 Y N4BP2L1 NA NA NA NA NA FRY 63358 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 32620673 32620873 32620777 Y N4BP2L2,N4BP2L2,N4BP2L1,BRCA2,FRY FRY NA NA NA NA FRY 17236 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 32956405 32956487 32956432 Y NA N4BP2L1 NA NA NA NA N4BP2L1 43828 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 33051019 33051050 33051035 Y NA NA NA NA NA NA N4BP2L1 50704 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 33728009 33728149 33728045 Y STARD13 NA NA NA NA NA STARD13 194618 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 33822427 33822802 33822649 Y NA NA NA NA NA NA STARD13 99965 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 33841256 33841381 33841376 Y NA NA NA NA NA NA STARD13 81386 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 34116442 34117241 34116673 Y NA NA NA NA NA NA STARD13 193675 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 34253090 34253722 34253494 Y NA NA NA NA NA NA RFC3 136464 CAGE HCC1806 hg19 FANTOM5 3.76714379793599 chr13 34731212 34731445 34731362 Y NA NA NA NA NA NA RFC3 341026 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 36630888 36631287 36631099 Y DCLK1 NA NA NA NA NA CCDC169 238690 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 38491234 38491367 38491301 Y NA NA NA NA NA NA UFM1 430619 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 40139698 40140018 40139948 Y NA LHFP NA NA NA NA LHFP 35647 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 41173351 41173594 41173358 Y NA NA NA NA NA NA FOXO1 65140 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 41226066 41226446 41226348 Y NA FOXO1 NA NA NA NA FOXO1 12288 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 41229483 41229797 41229615 Y NA FOXO1 NA NA NA NA FOXO1 8937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 41468341 41468634 41468483 Y NA SUGT1P3 NA NA NA NA SUGT1P3 25276 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 41586512 41586699 41586606 Y NA WBP4,ELF1 NA NA NA NA WBP4 46711 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 41589057 41589218 41589148 Y NA WBP4,ELF1 NA NA NA NA WBP4 44192 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 42534426 42534531 42534479 Y NA NA NA NA NA NA AKAP11 309758 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 42705100 42705257 42705170 Y NA NA NA NA NA NA AKAP11 139032 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 42855017 42855240 42855076 Y AKAP11 AKAP11 NA NA NA NA AKAP11 10728 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 43451555 43451845 43451701 Y NA NA NA NA NA NA EPSTI1 112562 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 44214613 44214990 44214818 Y ENOX1,ENOX1 NA NA NA NA NA LACC1 236430 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 44542732 44543742 44543446 Y SERP2 NA SERP2 IMR90 Hi-C 24141950 CCDC122 90905 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 44765408 44765809 44765737 Y NA NA SERP2,TSC22D1,LINC00284 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SERP2 179992 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 44848357 44848873 44848719 Y C13orf31,CCDC122,C13orf31 NA SERP2,NUFIP1,TSC22D1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SERP2 96928 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 44880536 44881091 44880742 Y C13orf31,CCDC122,C13orf31 NA TSC22D1,LACC1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SERP2 64710 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 44924960 44925274 44925109 Y NA SERP2 SERP2,TSC22D1 IMR90 Hi-C 24141950 SERP2 20527 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 45492137 45492940 45492235 Y TSC22D1 NA NA NA NA NA NUFIP1 68678 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 45745052 45745233 45745142 Y NA NA NA NA NA NA GTF2F2 52402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 45774024 45774110 45774098 Y KCTD4 NA NA NA NA NA GTF2F2 81374 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 45813210 45813281 45813243 Y NA NA NA NA NA NA TPT1-AS1 100199 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr13 45941510 45941762 45941695 Y COG3,TPT1 TPT1-AS1,TPT1,SLC25A30 NA NA NA NA TPT1 28005 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 46244354 46244716 46244645 Y NA NA NA NA NA NA SIAH3 179155 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 46709325 46709604 46709495 Y NA NA NA NA NA NA LCP1 74402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 46724053 46724328 46724215 Y NA NA NA NA NA NA LCP1 59678 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 46736375 46736487 46736423 Y ZC3H13,C13orf18,LCP1 LCP1 NA NA NA NA LCP1 47519 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 47128078 47128394 47128310 Y LCP1,C13orf18,LRCH1 LRCH1 NA NA NA NA LRCH1 2775 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 48526121 48526135 48526130 Y MED4,SUCLA2 NA NA NA NA NA NUDT15 83568 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr13 49761885 49761908 49761899 Y NA NA NA NA NA NA CDADC1 58139 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 50094191 50094472 50094332 Y CAB39L,SETDB2,PHF11,PHF11 PHF11 NA NA NA NA PHF11 26445 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 52303239 52303556 52303323 Y WDFY2 NA NA NA NA NA DHRS12 72737 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 60635732 60636010 60635830 Y NA NA NA NA NA NA DIAPH3 100111 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 64623751 64624068 64623941 Y NA LINC00355 NA NA NA NA LINC00355 24076 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 64652316 64652644 64652373 Y NA LINC00355 NA NA NA NA LINC00355 4172 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr13 66687218 66687393 66687306 Y NA NA NA NA NA NA PCDH9 1115075 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 67461334 67461726 67461614 Y PCDH9 NA NA NA NA NA PCDH9 340742 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 67674730 67675228 67675034 Y NA NA NA NA NA NA PCDH9 127240 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 73942793 73943059 73942972 Y KLF5 NA NA NA NA NA FABP5P1 269670 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 74184794 74185193 74184838 Y NA NA PIBF1 IMR90 Hi-C 24141950 FABP5P1 511671 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 74228674 74228703 74228690 Y NA NA NA NA NA NA KLF12 477691 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 74276580 74276751 74276632 Y KLF12 NA NA NA NA NA KLF12 429643 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 74467154 74467532 74467385 Y NA NA NA NA NA NA KLF12 238862 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 74706134 74706569 74706487 Y KLF12 NA NA NA NA NA KLF12 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 74709487 74710034 74709735 Y KLF12 KLF12 NA NA NA NA KLF12 3093 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 75800411 75800558 75800473 Y NA NA NA NA NA NA TBC1D4 253692 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 76279211 76279429 76279239 Y NA NA NA NA NA NA LMO7 86641 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr13 76279599 76280073 76279764 Y LMO7 NA NA NA NA NA LMO7 87029 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 77897670 77898015 77897832 Y NA MYCBP2 NA NA NA NA MYCBP2 1170 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 78158324 78158538 78158433 Y MYCBP2,SLAIN1,SLAIN1,EDNRB,EDNRB NA NA NA NA NA SCEL 50515 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 80078013 80078214 80078058 Y NA NDFIP2 NA NA NA NA NDFIP2 24726 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 80122895 80122985 80122937 Y NA NA NA NA NA NA NDFIP2 69608 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 96284564 96284961 96284763 Y NA DZIP1,DNAJC3-AS1,DNAJC3 NA NA NA NA DZIP1 9996 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 97424682 97424992 97424817 Y NA NA NA NA NA NA MBNL2 446696 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 99128638 99129073 99128919 Y STK24 NA NA NA NA NA STK24 99121 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 100310859 100311153 100311058 Y ZIC5,ZIC2 NA NA NA NA NA CLYBL 53940 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 103244790 103245125 103245073 Y ERCC5,TPP2 TPP2 TPP2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TPP2 2228 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 103249969 103250343 103250155 Y ERCC5,TPP2 TPP2 NA NA NA NA TPP2 2616 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 103752669 103752951 103752813 Y NA NA NA NA NA NA ERCC5 257475 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 105791770 105791914 105791835 Y NA NA NA NA NA NA LINC00460 1234997 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 106803810 106804031 106803901 Y NA NA EFNB2 IMR90 Hi-C 24141950 LINC00460 222880 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 107124360 107124455 107124408 Y NA NA NA NA NA NA ARGLU1 94057 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 107186008 107186474 107186341 Y NA ARGLU1 NA NA NA NA ARGLU1 32038 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 107188808 107188962 107188940 Y NA ARGLU1 NA NA NA NA ARGLU1 29550 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 107448247 107448283 107448269 Y NA NA NA NA NA NA ARGLU1 229735 CAGE HCC1806 hg19 FANTOM5 3.29625082319399 chr13 109807507 109807975 109807755 Y NA NA NA NA NA NA AL162497.1 597640 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 109847392 109847697 109847628 Y NA NA NA NA NA NA AL162497.1 557918 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 109921804 109922211 109922051 Y NA NA IRS2 IMR90 Hi-C 24141950 AL162497.1 483404 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 110299478 110299796 110299637 Y NA NA MYO16 IMR90 Hi-C 24141950 AL162497.1 105819 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 110322109 110322425 110322268 Y NA NA MYO16 IMR90 Hi-C 24141950 AL162497.1 83190 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 110390802 110390941 110390862 Y NA AL162497.1,IRS2 NA NA NA NA AL162497.1 14674 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr13 110426988 110427362 110427201 Y NA AL162497.1,IRS2 NA NA NA NA IRS2 9553 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 110521819 110522258 110522077 Y NA NA MYO16,IRS2,COL4A1 IMR90 Hi-C 24141950 IRS2 84904 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 110664530 110664847 110664695 Y NA NA MYO16 IMR90 Hi-C 24141950 IRS2 227615 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 110746992 110747342 110747118 Y NA NA MYO16,IRS2 IMR90 Hi-C 24141950 COL4A2 208817 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 111071465 111071591 111071508 Y NA NA NA NA NA NA COL4A1 113969 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 111176913 111177121 111177092 Y ING1,ING1,ANKRD10,RAB20 RAB20 NA NA NA NA RAB20 34959 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 111180820 111181023 111180903 Y ING1,ING1,ANKRD10,RAB20 RAB20 NA NA NA NA RAB20 31057 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 111278486 111278706 111278495 Y NA CARKD NA NA NA NA CARKD 12605 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 111589420 111590157 111589779 Y NA ANKRD10 ARHGEF7,LINC00346 IMR90 Hi-C 24141950 ANKRD10 24004 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr13 111594578 111594832 111594693 Y RAB20,ANKRD10 ANKRD10 ANKRD10,ARHGEF7 IMR90 Hi-C 24141950 ANKRD10 29162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 111607450 111607830 111607755 Y RAB20,ING1,ING1,ANKRD10 ANKRD10 ARHGEF7,ANKRD10 IMR90 Hi-C 24141950 ANKRD10 42034 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 111695990 111696309 111696026 Y NA NA ING1,ARHGEF7,ANKRD10 IMR90 Hi-C 24141950 ARHGEF7 68597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 113377120 113377559 113377252 Y NA ATP11A NA NA NA NA ATP11A 34477 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 113434951 113435188 113435090 Y NA NA NA NA NA NA ATP11A 92308 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 113514166 113514374 113514224 Y NA NA NA NA NA NA MCF2L-AS1 106764 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 113585588 113585716 113585676 Y CUL4A,CUL4A MCF2L-AS1 C13orf35,ATP11A,MCF2L GM12878,HELA,K562,H1ESC 5C 22955621 MCF2L-AS1 35422 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr13 113677034 113677374 113677296 Y NA NA NA NA NA NA MCF2L-AS1 55896 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 113806516 113806910 113806731 Y ATP11A,CUL4A NA PROZ IMR90 Hi-C 24141950 CUL4A 53642 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 113870568 113870732 113870682 Y MCF2L,DCUN1D2,ADPRHL1,F10 CUL4A,PCID2 NA NA NA NA PCID2 9539 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 114147699 114148153 114147800 Y F7,F10,PROZ,GRTP1 DCUN1D2,TMCO3 NA NA NA NA TMCO3 4389 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr13 114459608 114459701 114459670 Y NA NA NA NA NA NA GAS6 105345 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 114565478 114566323 114565869 Y GAS6,GAS6,GAS6 GAS6 NA NA NA NA GAS6 432 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr13 114830489 114831626 114831334 Y RASA3 NA NA NA NA NA RASA3 64460 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 20803011 20803143 20803077 Y NA TTC5,CCNB1IP1,PARP2,RPPH1 NA NA NA NA CCNB1IP1 3540 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 21288613 21288985 21288797 Y NA RNASE1 NA NA NA NA RNASE1 19176 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 23293879 23294567 23294288 Y RBM23,C14orf119,SLC7A7,SLC7A7 MRPL52,MMP14,LRP10 REM2 MCF7 ChIA-PET 22265404 MRPL52 2521 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 23449151 23449315 23449234 Y MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB MIR4707,HAUS4,AJUBA,C14orf93 NA NA NA NA AJUBA 536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 23449757 23450231 23450060 Y MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB,JUB MIR4707,HAUS4,C14orf93 NA NA NA NA AJUBA 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 24861663 24861718 24861669 Y IPO4,RABGGTA,RABGGTA NYNRIN,KHNYN,SDR39U1 NA NA NA NA NYNRIN 4274 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 25476676 25476861 25476696 Y NA NA NA NA NA NA HMGN2P6 257681 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 27311220 27311475 27311345 Y NA NA NA NA NA NA CTD-3006G17.2 1001017 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 28109127 28109447 28109287 Y NA NA NA NA NA NA CTD-3006G17.2 203045 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 29228603 29228912 29228757 Y FOXG1 FOXG1,C14orf23 NA NA NA NA FOXG1 4138 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 32477016 32477383 32477087 Y NA NA NUBPL IMR90 Hi-C 24141950 ARHGAP5 65937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 32672212 32672871 32672506 Y ARHGAP5 NA NUBPL,ARHGAP5-AS1,ARHGAP5 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP5-AS1 128213 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 32953597 32954289 32954012 Y ARHGAP5,AKAP6,NPAS3 RP11-320M16.1 NA NA NA NA RP11-320M16.1 1591 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr14 33756619 33756719 33756669 Y NA NA NA NA NA NA RP11-320M16.1 804613 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 34472073 34472091 34472083 Y NA NA NA NA NA NA SPTSSA 457471 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 34529400 34529785 34529476 Y EGLN3 NA EGLN3 K562,MCF7 ChIA-PET 22265404 SPTSSA 399777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 34532843 34533079 34532927 Y EGLN3 NA NA NA NA NA SPTSSA 396483 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 35628271 35628433 35628369 Y NA PPP2R3C,KIAA0391 NA NA NA NA KIAA0391 38516 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr14 35855857 35856187 35856101 Y NA RP11-561B11.1,NFKBIA NA NA NA NA RP11-561B11.1 88 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 38534360 38534722 38534543 Y NA NA NA NA NA NA FOXA1 467115 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 39768270 39768447 39768359 Y PNN,MIA2 CTAGE5 NA NA NA NA CTAGE5 35782 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 41099089 41099243 41099183 Y NA NA NA NA NA NA FBXO33 1199385 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr14 43420114 43420297 43420206 Y NA NA NA NA NA NA C14orf28 1944201 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 48101040 48101412 48101227 Y NA NA NA NA NA NA RPL13AP2 432733 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 49979013 49979291 49979168 Y C14orf182 NA NA NA NA NA RPS29 84117 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 50329576 50329987 50329651 Y NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 11655 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 50334846 50335244 50334992 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 16925 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 50531720 50532221 50531875 Y RPL36AL,ARF6,C14orf182 RP11-58E21.3 NA NA NA NA RP11-58E21.3 25773 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 50648447 50648735 50648723 Y NA SOS2 NA NA NA NA SOS2 47541 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 51410207 51410388 51410282 Y NIN,PYGL PYGL NA NA NA NA PYGL 753 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 51434779 51434836 51434798 Y NA PYGL NA NA NA NA PYGL 25325 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 51862095 51862490 51862300 Y FRMD6,FRMD6 NA LOC283553,FRMD6,FRMD6-AS1 IMR90 Hi-C 24141950 FRMD6 91328 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 51980347 51980357 51980352 Y TRIM9 FRMD6 NA NA NA NA FRMD6 26529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 51992800 51993196 51992853 Y NA FRMD6 NA NA NA NA FRMD6 38982 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 53575786 53575939 53575850 Y DDHD1 DDHD1 NA NA NA NA DDHD1 42061 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 54833964 54834357 54834051 Y NA CDKN3 NA NA NA NA CDKN3 27210 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 54954614 54954684 54954648 Y NA GMFB,CGRRF1 NA NA NA NA GMFB 700 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 55152891 55153126 55153104 Y SAMD4A NA NA NA NA NA SAMD4A 121076 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 55302493 55302656 55302575 Y NA NA NA NA NA NA GCH1 64914 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 55439267 55439511 55439438 Y NA NA NA NA NA NA WDHD1 52312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 55544307 55544654 55544518 Y NA MAPK1IP1L,LGALS3 NA NA NA NA MAPK1IP1L 27958 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 55765939 55766288 55766115 Y GCH1 FBXO34,RP11-665C16.6 NA NA NA NA RP11-665C16.6 29146 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 56047594 56047945 56047904 Y NA KTN1,KTN1-AS1 NA NA NA NA KTN1-AS1 2766 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 58726838 58727438 58727133 Y NA PSMA3,RP11-349A22.5,C14orf37,ARID4A NA NA NA NA PSMA3 17289 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 59002332 59002438 59002384 Y NA NA NA NA NA NA TIMM9 110000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 60618583 60618767 60618659 Y PPM1A,C14orf135,DHRS7 DHRS7 NA NA NA NA DHRS7 15807 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 60679186 60679974 60679676 Y NA DHRS7,PPM1A,CTD-2184C24.2 NA NA NA NA PPM1A 30496 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61188472 61188761 61188676 Y PPM1A SIX4,MNAT1 NA NA NA NA SIX4 305 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61645426 61645731 61645594 Y NA PRKCH SLC38A6,SIX1,MNAT1,TRMT5,SIX4 IMR90 Hi-C 24141950 PRKCH 6546 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61801031 61801197 61801068 Y NA RP11-902B17.1 NA NA NA NA RP11-902B17.1 13495 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61801818 61802258 61801925 Y PRKCH RP11-902B17.1 NA NA NA NA RP11-902B17.1 14282 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61809267 61809583 61809345 Y PRKCH RP11-902B17.1 NA NA NA NA RP11-902B17.1 21731 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61822624 61823005 61822699 Y PRKCH RP11-902B17.1 NA NA NA NA RP11-902B17.1 35088 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 61865216 61865457 61865337 Y PRKCH NA NA NA NA NA RP11-902B17.1 77680 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61926511 61926958 61926677 Y PRKCH NA NA NA NA NA RP11-902B17.1 138975 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 61939634 61940081 61939867 Y PRKCH,HIF1A NA NA NA NA NA RP11-902B17.1 152098 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 62076216 62076332 62076274 Y NA NA NA NA NA NA HIF1A 83899 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 64185455 64185764 64185678 Y PPP2R5E,SYNE2,WDR89,WDR89,SGPP1 SGPP1 NA NA NA NA SGPP1 6993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 64584533 64584935 64584736 Y NA NA NA NA NA NA SYNE2 266850 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 64720777 64720916 64720847 Y NA NA NA NA NA NA MTHFD1 131833 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 65140427 65140812 65140646 Y SYNE2,ZBTB1,PLEKHG3,MAX,CHURC1 PLEKHG3 SPTB,PPP1R36,PLEKHG3,CHURC1-FNTB IMR90 Hi-C 24141950 PLEKHG3 28008 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 65231601 65231863 65231701 Y NA NA NA NA NA NA PLEKHG3 62781 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 65746592 65747003 65746788 Y NA CTD-2509G16.5 LOC645431,FUT8,MIR4708 IMR90 Hi-C 24141950 CTD-2509G16.5 36505 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 66126309 66126626 66126333 Y NA NA NA NA NA NA FUT8 250999 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 67809024 67809296 67809169 Y RDH12,MPP5,PLEKHH1 EIF2S1,ATP6V1D NA NA NA NA EIF2S1 15418 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 68161499 68161767 68161616 Y PLEK2 VTI1B,RDH11,RDH12 NA NA NA NA RDH11 968 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 68604521 68604895 68604639 Y NA NA NA NA NA NA PPIAP6 282018 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 68607037 68607479 68607161 Y NA NA NA NA NA NA PPIAP6 279434 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 68644384 68644906 68644390 Y NA NA NA NA NA NA PPIAP6 242007 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 69246726 69246992 69246942 Y DCAF5 ZFP36L1 NA NA NA NA ZFP36L1 14198 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 69301401 69301774 69301727 Y DCAF5,ZFP36L1 ZFP36L1 RAD51B,ZFYVE26 IMR90 Hi-C 24141950 ZFP36L1 40211 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 69328763 69329130 69328947 Y NA NA NA NA NA NA ZFP36L1 67573 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 69424468 69424783 69424642 Y NA ACTN1 NA NA NA NA ACTN1 19374 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 69851262 69851639 69851451 Y NA SLC39A9,ERH NA NA NA NA SLC39A9 11093 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 70020113 70020453 70020282 Y NA NA NA NA NA NA KIAA0247 55860 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 71164534 71164679 71164625 Y MED6 RP6-65G23.1 NA NA NA NA RP6-65G23.1 1119 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr14 71797093 71797681 71797289 Y PCNX SIPA1L1 SIPA1L1,LOC145474 IMR90 Hi-C 24141950 SIPA1L1 11927 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 71870372 71870659 71870456 Y PCNX,SIPA1L1 NA NA NA NA NA SIPA1L1 85206 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 73595262 73595380 73595321 Y NA PSEN1 NA NA NA NA PSEN1 5746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 74207610 74207866 74207660 Y C14orf43 PNMA1 NA NA NA NA PNMA1 28482 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 74208106 74208498 74208298 Y C14orf43 PNMA1 NA NA NA NA PNMA1 28978 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 74741846 74742137 74741995 Y FCF1 ABCD4 NA NA NA NA ABCD4 25622 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 74949377 74949710 74949544 Y NA MIR4709,ISCA2,NPC2 NA NA NA NA MIR4709 4470 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 75033495 75033781 75033700 Y NA NA NA NA NA NA NPC2 74615 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 75592667 75593037 75593004 Y NA RP11-950C14.7,NEK9,TMED10 NA NA NA NA NEK9 620 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 75688633 75689211 75688968 Y DLST,FOS TMED10,RP11-293M10.2 PGF,NEK9,TMED10,FOS,LOC731223,BATF IMR90 Hi-C 24141950 RP11-293M10.2 34903 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr14 76843326 76843356 76843341 Y NA NA NA NA NA NA RP11-187O7.1 256648 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 77431067 77431579 77431238 Y NA RP11-7F17.7,RP11-7F17.1 IRF2BPL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-7F17.1 1447 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 77499482 77500543 77500476 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 6448 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 80156436 80156705 80156544 Y NA NA NA NA NA NA CEP128 1267156 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 81484958 81485153 81484991 Y TSHR NA NA NA NA NA CEP128 61097 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 81685513 81686063 81685724 Y GTF2A1,GTF2A1 SNORA79 NA NA NA NA GTF2A1 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 85881762 85881957 85881956 Y FLRT2 NA NA NA NA NA RP11-497E19.1 112375 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr14 88428642 88428978 88428810 Y GPR65 GALC NA NA NA NA GALC 29031 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 89950912 89951066 89950980 Y FOXN3 NA NA NA NA NA FOXN3 132427 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 90280261 90280500 90280379 Y NA NA NA NA NA NA EFCAB11 138621 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 91393752 91394149 91393951 Y NA NA NA NA NA NA TTC7B 112929 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 91423143 91423331 91423289 Y RPS6KA5,CCDC88C NA NA NA NA NA C14orf159 101346 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 93475811 93476205 93475939 Y RIN3,KIAA1409 NA NA NA NA NA ITPK1 104460 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 93698124 93698181 93698153 Y NA MOAP1,RP11-371E8.4,UBR7,C14orf142 NA NA NA NA C14orf142 26685 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 99439262 99439638 99439565 Y NA NA NA NA NA NA BCL11B 296223 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 99719779 99719971 99719888 Y BCL11B BCL11B NA NA NA NA BCL11B 15890 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 99735950 99736476 99736276 Y BCL11B BCL11B NA NA NA NA BCL11B 89 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 100751761 100751840 100751790 Y NA YY1,RP11-638I2.4,SLC25A29 NA NA NA NA SLC25A29 19044 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 100804523 100804880 100804765 Y NA SLC25A29,RP11-638I2.10,WDR25,WARS NA NA NA NA RP11-638I2.10 26085 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 102288392 102288845 102288491 Y NA NA NA NA NA NA PPP2R5C 62257 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 102414226 102414964 102414565 Y NA DYNC1H1 NA NA NA NA DYNC1H1 13901 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr14 102530459 102530762 102530662 Y NA NA NA NA NA NA WDR20 73078 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 102991831 102991939 102991900 Y NA ANKRD9 ANKRD9,RCOR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD9 17695 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 102993844 102994139 102994010 Y TRAF3,RCOR1 ANKRD9 RCOR1,TECPR2,ANKRD9,CDC42BPB,MIR4309,TRAF3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ANKRD9 19708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 103577206 103577606 103577492 Y C14orf153 RP11-736N17.8,TNFAIP2 NA NA NA NA TNFAIP2 10173 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr14 103726827 103727460 103727139 Y MARK3,TRAF3,TNFAIP2,EIF5,EIF5 NA EIF5,CDC42BPB,EXOC3L4,TNFAIP2,LOC100131366 IMR90 Hi-C 24141950 EIF5 70421 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 103929089 103929460 103929098 Y NA NA NA NA NA NA CKB 57988 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 104583053 104583460 104583371 Y NA MIR203,KIF26A NA NA NA NA MIR203 1311 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr14 104993565 104993828 104993574 Y NA NA KIF26A IMR90 Hi-C 24141950 INF2 160115 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 105144100 105144955 105144117 Y GPR132,AKT1 INF2 NA NA NA NA INF2 8988 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 105154013 105154712 105154273 Y ADSSL1 INF2 NA NA NA NA INF2 70 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 105327046 105327788 105327205 Y NA NA NA NA NA NA AKT1 66958 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 105435117 105435479 105435281 Y KIAA0284 AHNAK2,C14orf79 PLD4 MCF7 ChIA-PET 22265404 AHNAK2 7215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 105438668 105438757 105438725 Y KIAA0284,JAG2,CDCA4,C14orf79,AHNAK2 AHNAK2,C14orf79,CDCA4 NA NA NA NA AHNAK2 3937 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 105493379 105493756 105493698 Y NA C14orf79,CDCA4 NA NA NA NA CDCA4 7894 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr14 105557924 105558306 105558075 Y NA NA BTBD6,BRF1,JAG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDCA4 72439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 105947921 105948133 105948082 Y NA CRIP2,CRIP1,C14orf80,TMEM121 NA NA NA NA CRIP1 3403 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr14 105948139 105949025 105948432 Y NA CRIP2,CRIP1,C14orf80,TMEM121 NA NA NA NA CRIP1 2511 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr14 106857348 106857526 106857389 Y NA NA NA NA NA NA LINC00221 78919 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr15 20570096 20570220 20570180 Y NA NA REREP3,POTEB,LOC348120,NF1P2,CHEK2P2 IMR90 Hi-C 24141950 RP11-603B24.2 1973869 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr15 20590692 20590758 20590725 Y NA NA NA NA NA NA RP11-603B24.2 1953331 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 20596893 20597220 20597190 Y NA NA NA NA NA NA RP11-603B24.2 1946869 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 20616457 20616559 20616506 Y NA NA NA NA NA NA RP11-603B24.2 1927530 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 20858746 20859095 20858885 Y NA NA NA NA NA NA RP11-603B24.2 1684994 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr15 21905791 21906130 21906013 Y NA NA NA NA NA NA RP11-603B24.2 637959 CAGE HCC1806 hg19 FANTOM5 152.098430841665 chr15 21914435 21914569 21914482 Y OR4N4 NA NA NA NA NA RP11-603B24.2 629520 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 25018281 25018456 25018384 Y SNURF,SNRPN,SNRPN,SNRPN SNRPN NA NA NA NA SNRPN 48338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 25563100 25563402 25563110 Y SNURF,SNRPN,UBE3A,UBE3A NA NA NA NA NA UBE3A 118726 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 25564293 25564526 25564383 Y SNRPN,SNURF,SNRPN,UBE3A,UBE3A NA NA NA NA NA UBE3A 117602 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr15 25565589 25566847 25566046 Y SNRPN,SNURF,SNRPN,UBE3A,UBE3A NA NA NA NA NA UBE3A 115281 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 25586903 25587047 25586976 Y SNRPN,SNURF,SNRPN,UBE3A,UBE3A NA NA NA NA NA UBE3A 95081 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 25624061 25624357 25624209 Y NA NA NA NA NA NA UBE3A 57771 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 26332554 26332834 26332747 Y NA NA NA NA NA NA UBE3A 650426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 26854717 26854952 26854835 Y NA NA NA NA NA NA UBE3A 1172589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 27333003 27333354 27333179 Y NA NA NA NA NA NA OCA2 1009150 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 29266500 29266713 29266607 Y NA NA NA NA NA NA APBA2 138871 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 33111010 33111355 33111242 Y NA NA NA NA NA NA RP11-758N13.1 101802 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 33164908 33165041 33164975 Y NA NA NA NA NA NA RP11-758N13.1 155700 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 33494122 33494379 33494251 Y NA NA NA NA NA NA RP11-758N13.1 484914 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 35590731 35591134 35590845 Y NA NA ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466 IMR90 Hi-C 24141950 ZNF770 312243 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr15 35599049 35599138 35599102 Y NA NA ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466 IMR90 Hi-C 24141950 ZNF770 320561 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 36720333 36720777 36720654 Y NA NA ATPBD4,LOC100507466 IMR90 Hi-C 24141950 C15orf41 149035 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 37175924 37176266 37175984 Y C15orf41,MEIS2,MEIS2,MEIS2,MEIS2 NA NA NA NA NA MEIS2 215238 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 37207397 37207450 37207424 Y C15orf41,MEIS2,MEIS2,MEIS2,MEIS2 NA NA NA NA NA MEIS2 184054 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 37261192 37261563 37261502 Y NA NA NA NA NA NA MEIS2 129941 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 39985163 39985564 39985388 Y NA NA NA NA NA NA FSIP1 87467 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 40391032 40391342 40391133 Y PLCB2,C15orf57,BMF,BMF,BMF BMF NA NA NA NA BMF 7751 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 40803808 40804249 40803896 Y NA CHST14 NA NA NA NA CHST14 42648 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 41138213 41138409 41138269 Y RHOV,SPINT1,SPINT1 ZFYVE19,DNAJC17,SPINT1,RHOV,VPS18 NA NA NA NA SPINT1 3997 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 41158071 41158384 41158228 Y RHOV SPINT1,RHOV,VPS18 NA NA NA NA RHOV 6103 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 41220555 41220912 41220794 Y NUSAP1,DLL4 VPS18,DLL4,CHAC1 NA NA NA NA DLL4 1017 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 41233721 41234461 41233781 Y C15orf57,VPS18 VPS18,DLL4,CHAC1 NA NA NA NA CHAC1 8699 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 41254301 41254691 41254494 Y NA DLL4,CHAC1 NA NA NA NA CHAC1 11141 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr15 41953918 41954236 41954127 Y EHD4,MGA MGA MAPKBP1 IMR90 Hi-C 24141950 MGA 42496 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42083275 42083582 42083459 Y NA MAPKBP1,JMJD7,PLA2G4B,JMJD7-PLA2G4B NA NA NA NA MAPKBP1 18643 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42228791 42229215 42228969 Y MGA,JMJD7,TMEM87A,EHD4 EHD4 NA NA NA NA EHD4 33561 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42232566 42232958 42232887 Y EHD4 EHD4 SPTBN5 IMR90 Hi-C 24141950 EHD4 29818 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42327713 42327843 42327787 Y MAPKBP1,PLA2G4B NA EHD4 IMR90 Hi-C 24141950 EHD4 64937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42349424 42349982 42349743 Y MGA,JMJD7,EHD4,VPS39,TMEM87A,SNAP23 NA PLA2G4E IMR90 Hi-C 24141950 EHD4 86648 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42535686 42535733 42535710 Y NA VPS39,GANC,TMEM87A NA NA NA NA GANC 27698 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 42968495 42968534 42968520 Y NA NA NA NA NA NA CDAN1 58790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 43152474 43152861 43152772 Y STARD9,TTBK2 NA NA NA NA NA TTBK2 58146 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 43356735 43357067 43356746 Y NA UBR1,RPS3AP47 NA NA NA NA UBR1 39244 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 43415014 43415563 43415337 Y NA UBR1,RPS3AP47,TMEM62 NA NA NA NA TMEM62 1537 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr15 44838663 44839045 44838853 Y NA EIF3J-AS1,EIF3J NA NA NA NA EIF3J 11408 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 44954800 44955080 44954968 Y CTDSPL2,TRIM69,PATL2,B2M,SPG11 SPG11,PATL2,B2M NA NA NA NA SPG11 924 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 45005185 45005759 45005376 Y CTDSPL2,SPG11,PATL2,B2M,TRIM69 PATL2,B2M,TRIM69 NA NA NA NA B2M 3510 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 45076532 45076874 45076594 Y B2M NA NA NA NA NA TRIM69 57346 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 45748469 45749175 45748989 Y SPATA5L1,C15orf48,SQRDL,PLDN RP11-519G16.3 NA NA NA NA RP11-519G16.3 9844 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr15 45892726 45892758 45892742 Y NA SQRDL NA NA NA NA SQRDL 28588 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 50995097 50995499 50995351 Y SPPL2A TRPM7 NA NA NA NA TRPM7 18085 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 51872747 51872927 51872852 Y TMOD3,MAPK6,LYSMD2,DMXL2 DMXL2 NA NA NA NA DMXL2 40103 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 52330351 52330361 52330356 Y NA NA NA NA NA NA CTD-2184D3.1 55131 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 52369278 52369628 52369325 Y MAPK6 CTD-2184D3.1,CTD-2184D3.5 GNB5,BCL2L10,MYO5C IMR90 Hi-C 24141950 CTD-2184D3.1 15864 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 52580530 52580869 52580787 Y ARPP19,MYO5C MYO5C NA NA NA NA MYO5C 5126 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 52777453 52777711 52777581 Y NA MYO5A NA NA NA NA MYO5A 41536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 52851602 52851989 52851853 Y NA MYO5A,ARPP19 NA NA NA NA ARPP19 8091 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 57261737 57262096 57261746 Y NA NA NA NA NA NA TCF12 52916 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 58884938 58885321 58885256 Y NA NA NA NA NA NA ADAM10 154856 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 59068062 59068279 59068172 Y NA ADAM10,FAM63B NA NA NA NA FAM63B 6671 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 59587320 59587393 59587357 Y NA NA NA NA NA NA FAM81A 75499 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 60835043 60835413 60835301 Y NA NA NA NA NA NA NARG2 65684 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 62207321 62207567 62207441 Y NA NA NA NA NA NA VPS13C 143105 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 63773261 63773631 63773483 Y LACTB,RAB8B,USP3 USP3 APH1B,RAB8B,CA12,USP3,HERC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP3 21162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 65054489 65054592 65054541 Y NA RBPMS2 NA NA NA NA RBPMS2 11194 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 65189466 65189943 65189728 Y OAZ2,PLEKHO2,SPG21,SPG21 ANKDD1A SPG21 IMR90 Hi-C 24141950 ANKDD1A 12158 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 65244919 65245418 65244949 Y ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16,ANKDD1A ANKDD1A,SPG21 NA NA NA NA SPG21 35230 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 65245420 65245827 65245459 Y ZNF609,OAZ2,PLEKHO2,PARP16 ANKDD1A,SPG21 NA NA NA NA SPG21 34821 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 67095524 67095803 67095671 Y NA NA NA NA NA NA SMAD6 102958 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 67134448 67134928 67134631 Y NA NA SMAD6,SNAPC5 IMR90 Hi-C 24141950 SMAD6 141882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 67490281 67490446 67490307 Y SMAD3 RPS24P16 NA NA NA NA RPS24P16 32338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 67516633 67516865 67516859 Y NA RPS24P16,IQCH,AAGAB NA NA NA NA RPS24P16 5919 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 68441418 68441688 68441529 Y NA NA NA NA NA NA PIAS1 96901 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 68993008 68993104 68993034 Y CORO2B,CORO2B NA NA NA NA NA SPESP1 115456 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 69650842 69650990 69650924 Y NA NA NA NA NA NA KIF23 53595 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 69724089 69724530 69724231 Y NA KIF23,RP11-253M7.1,RPLP1 NA NA NA NA RPLP1 18593 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 70391851 70392235 70392005 Y TLE3 TLE3 NA NA NA NA TLE3 3336 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 71371688 71372044 71371801 Y THSD4 NA LRRC49,THSD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THAP10 188564 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 72518614 72519346 72519221 Y ARIH1,PKM2 GRAMD2 NA NA NA NA GRAMD2 30488 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 73061587 73061861 73061724 Y PARP6,CELF6,CELF6,ARIH1,ADPGK ADPGK NA NA NA NA ADPGK 14326 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 73939698 73939908 73939794 Y NA NPTN,CD276 C15orf60 IMR90 Hi-C 24141950 NPTN 15223 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 74274053 74274479 74274311 Y PML STOML1,PML NA NA NA NA STOML1 10484 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 74287730 74287905 74287836 Y PML STOML1,PML NA NA NA NA PML 2716 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 74677413 74677899 74677622 Y SEMA7A,SEMA7A,CSK,CLK3,ARID3B SEMA7A SEMA7A K562 ChIA-PET 22265404 SEMA7A 46909 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 74899091 74899429 74899332 Y PPCDC,CLK3,CLK3 CLK3 NA NA NA NA CLK3 10250 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 74908840 74909023 74908946 Y NA CLK3 NA NA NA NA CLK3 19999 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 75746315 75746749 75746512 Y PPCDC,C15orf39,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A SIN3A NA NA NA NA SIN3A 132 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 76639629 76639850 76639740 Y NA ETFA,ISL2 NA NA NA NA ISL2 12564 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 80211933 80212232 80212185 Y NA MTHFS,ST20,BCL2A1 NA NA NA NA ST20 1812 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 81069569 81069760 81069666 Y MESDC1,KIAA1199 NA NA NA NA NA KIAA1199 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 81590185 81590430 81590333 Y MESDC1,IL16,STARD5 STARD5,RP11-761I4.3 NA NA NA NA STARD5 24094 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 81596403 81597133 81596761 Y MESDC1,STARD5 STARD5,RP11-761I4.3 NA NA NA NA STARD5 17391 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 82339167 82339811 82339478 Y MEX3B MEX3B NA NA NA NA MEX3B 2685 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 83817881 83818018 83817954 Y NA TM6SF1 NA NA NA NA TM6SF1 43722 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 83954950 83955303 83955151 Y BNC1 BNC1 NA NA NA NA BNC1 3484 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 84048302 84048583 84048506 Y BNC1 NA SH3GL3,BNC1 IMR90 Hi-C 24141950 SH3GL3 65397 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 85458286 85458507 85458420 Y NA NA NA NA NA NA PDE8A 63164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 85711891 85712151 85712051 Y NA NA PDE8A MCF7 ChIA-PET 22265404 PDE8A 190220 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 85890027 85890200 85890120 Y AKAP13 AKAP13 AKAP13 IMR90 Hi-C 24141950 AKAP13 31602 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 85951741 85952026 85951782 Y AKAP13,PDE8A AKAP13,CTD-2262B20.1 NA NA NA NA CTD-2262B20.1 4433 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 85987048 85987479 85987219 Y AKAP13,AKAP13 CTD-2262B20.1 NA NA NA NA CTD-2262B20.1 30589 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 86088256 86088945 86088625 Y NA NA NA NA NA NA CTD-2262B20.1 131797 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 90005846 90006063 90005954 Y NA RHCG NA NA NA NA RHCG 31781 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 90324413 90324614 90324489 Y POLG,ZNF710,CIB1,ANPEP ANPEP NA NA NA NA ANPEP 32019 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 90325168 90325324 90325249 Y POLG,ZNF710,CIB1,ANPEP ANPEP NA NA NA NA ANPEP 31309 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 91331328 91331736 91331526 Y NA NA NA NA NA NA BLM 72770 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 92012941 92013525 92013349 Y SLCO3A1,VPS33B NA NA NA NA NA SLCO3A1 381400 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 92400491 92400865 92400640 Y SLCO3A1 SLCO3A1 NA NA NA NA SLCO3A1 5566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 92486040 92486252 92486096 Y SLCO3A1 NA NA NA NA NA SLCO3A1 91115 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 92491090 92491332 92491214 Y SLCO3A1 NA NA NA NA NA SLCO3A1 96165 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 92674353 92674494 92674375 Y SLCO3A1 NA NA NA NA NA NPM1P5 152577 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 93354824 93354998 93354897 Y CHD2 FAM174B NA NA NA NA FAM174B 3710 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 93363497 93364154 93363735 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 FAM174B ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 FAM174B 12383 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr15 93374780 93375598 93375185 Y NA FAM174B,CHD2 CHD2,LOC100507217,ASB9P1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM174B 23666 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 93520042 93520437 93520098 Y CHD2 NA NA NA NA NA CHD2 95516 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 93542371 93542660 93542397 Y NA NA NA NA NA NA CHD2 117845 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 94746622 94746847 94746732 Y NA MCTP2 NA NA NA NA MCTP2 25920 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 96900187 96900329 96900243 Y NR2F2,NR2F2 NR2F2,NR2F2-AS1 NA NA NA NA NR2F2-AS1 31597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 98522080 98522356 98522128 Y NA NA NA NA NA NA ARRDC4 61296 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 99091450 99092159 99091603 Y NA NA IGF1R,SYNM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IGF1R 98041 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 99193577 99194531 99194069 Y IGF1R IGF1R NA NA NA NA IGF1R 3377 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 99416036 99416369 99416103 Y IGF1R NA NA NA NA NA SYNM 220051 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 100651295 100651582 100651483 Y NA NA NA NA NA NA LYSMD4 379529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 101233795 101233911 101233855 Y ASB7,ALDH1A3 NA ALDH1A3,LRRK1,SELS IMR90 Hi-C 24141950 LINS 92360 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr15 101261855 101262549 101262221 Y NA NA ALDH1A3,LRRK1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINS 120420 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr15 101481026 101481320 101481182 Y LRRK1 LRRK1 NA NA NA NA LRRK1 23606 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr15 101834172 101834455 101834316 Y TM2D3,TARSL2,SNRPA1 CHSY1,SNRPA1 NA NA NA NA SNRPA1 685 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 121563 121849 121614 Y TMEM8A,PIGQ,PIGQ,NME4,MRPL28,ITFG3,DECR2,RHBDF1,MPG,MPG SNRNP25,POLR3K,RHBDF1,MPG NA NA NA NA RHBDF1 2505 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 575519 575832 575766 Y NHLRC4 PIGQ NA NA NA NA PIGQ 39163 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 578748 579156 578911 Y LUC7L PIGQ NA NA NA NA PIGQ 35839 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr16 729341 729555 729445 Y NA C16orf13,FAM195A,AL022341.3,WDR90,RHOT2,STUB1,JMJD8,WDR24,FBXL16,METRN,FAM173A,HAGHL NA NA NA NA STUB1 1117 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 858833 859023 858927 Y RHBDL1,FBXL16,SOX8 CHTF18,RPUSD1 NA NA NA NA RPUSD1 22436 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 1150049 1150415 1150232 Y NA NA NA NA NA NA SOX8 120241 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 1585533 1585949 1585726 Y NA TELO2 NA NA NA NA TELO2 44188 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 2057818 2059084 2058234 Y TRAF7,ECI1,HN1L,EME2,ZNF598 SNORA64,RPS2,SNHG9,TBL3,GFER,SYNGR3,SLC9A3R2,TSC2,NTHL1 NA NA NA NA ZNF598,NPW 0 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr16 2478608 2478672 2478640 Y RPS2,RNF151,TBL3,GFER,NTHL1,TSC2,TRAF7,MLST8,MLST8,DNASE1L2,ECI1,TCEB2,FLYWCH2 CCNF,C16orf59,TBC1D24 NA NA NA NA CCNF 1213 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 2904626 2904661 2904644 Y NA PRSS22,FLYWCH2 NA NA NA NA PRSS22 1510 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 2917931 2918273 2918246 Y NA PRSS22,FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 PRSS22 11760 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 3053798 3054225 3053960 Y NA KREMEN2,PAQR4,PKMYT1,CLDN9,TNFRSF12A,THOC6,HCFC1R1,MMP25 NA NA NA NA CLDN9 6232 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 3060017 3060177 3060084 Y NAT15,PRSS22,CCDC64B,THOC6,CLDN9 KREMEN2,PAQR4,PKMYT1,CLDN9,TNFRSF12A,THOC6,HCFC1R1,MMP25 NA NA NA NA CLDN9 280 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 3156518 3156937 3156694 Y PAQR4,CLUAP1,ZNF205 IL32,ZNF205,ZNF213 NA NA NA NA ZNF205 3624 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr16 3202363 3202472 3202417 Y NA ZNF205,ZNF213 NA NA NA NA ZNF213 24585 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 3207486 3207903 3207712 Y SRRM2,ZNF75A,ZNF597,ZNF200,ZNF200,ZNF200,NLRC3,MEFV ZNF205,ZNF213 NA NA NA NA ZNF213 29708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 3237977 3238591 3238121 Y NA ZNF200 ZNF200 K562 ChIA-PET 22265404 ZNF200 45630 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 3285972 3286117 3286070 Y PRSS22,ZSCAN10,ZNF200,ZNF200,ZNF200,ZNF75A,ZNF263 ZNF200,ZNF263 NA NA NA NA ZNF200 1751 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr16 3414643 3415237 3414919 Y NA MTRNR2L4,ZNF174 NA NA NA NA MTRNR2L4 5046 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 3889135 3889287 3889211 Y NA CREBBP NA NA NA NA CREBBP 39440 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 4186619 4186736 4186682 Y NA ADCY9 CREBBP,ADCY9,SRL,TRAP1,CORO7-PAM16,PAM16 IMR90 Hi-C 24141950 ADCY9 22433 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 4233647 4234082 4234013 Y NA NA NA NA NA NA ADCY9 69461 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 4321625 4322178 4321908 Y ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4 TFAP4 NA NA NA NA TFAP4 549 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr16 4357393 4358110 4357824 Y CORO7 TFAP4,PAM16 ADCY9,CREBBP,TFAP4,LOC100507501,VASN,CORO7-PAM16 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TFAP4 36317 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 4818680 4818913 4818758 Y C16orf5,C16orf5,SEC14L5,ROGDI ANKS3,ZNF500,ROGDI NA NA NA NA ZNF500 3055 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 4944877 4945061 4944987 Y HMOX2,C16orf5,C16orf5,LOC342346,C16orf71,SEPT12,SEC14L5,ROGDI GLYR1 NA NA NA NA GLYR1 49534 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 6415499 6415992 6415721 Y RBFOX1,RBFOX1 NA NA NA NA NA FAM86A 1269690 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 7380911 7381241 7380947 Y RBFOX1 NA NA NA NA NA METTL22 1332299 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 8852303 8852368 8852337 Y NA PMM2,TMEM186 PMM2,TMEM186 IMR90 Hi-C 24141950 PMM2 28312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 8939360 8939674 8939516 Y USP7 TMEM186,CARHSP1 NA NA NA NA CARHSP1 21192 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 9208363 9208890 9208559 Y NA C16orf72 NA NA NA NA C16orf72 24858 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 10672618 10672930 10672712 Y NA EMP2 NA NA NA NA EMP2 63 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 10710369 10710537 10710438 Y NA EMP2 NA NA NA NA EMP2 37814 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11336726 11336842 11336760 Y LITAF,LITAF RMI2,SOCS1 NA NA NA NA RMI2 4634 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11489659 11490054 11489857 Y NA NA BCAR4,LITAF,TXNDC11,SNN IMR90 Hi-C 24141950 SOCS1 141623 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 11591931 11591962 11591945 Y NA NA SNN,TXNDC11,CLEC16A,LITAF IMR90 Hi-C 24141950 LITAF 136275 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11691003 11692063 11691252 Y SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN LITAF LITAF MCF7 ChIA-PET 22265404 LITAF 36174 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11734091 11734770 11734262 Y SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN LITAF,SNN TXNDC11,SNN,CLEC16A,LITAF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LITAF 5854 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11738622 11738966 11738794 Y NA LITAF,SNN CLEC16A,TXNDC11,LITAF IMR90 Hi-C 24141950 LITAF 10385 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11890330 11890418 11890367 Y LITAF,LITAF,SNN,RUNDC2A,TXNDC11,ZC3H7A ZC3H7A NA NA NA NA ZC3H7A 1207 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 11968147 11968344 11968329 Y ZC3H7A RSL1D1,GSPT1 RSL1D1 IMR90 Hi-C 24141950 RSL1D1 24705 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 12008398 12008797 12008598 Y NA GSPT1 NA NA NA NA GSPT1 459 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 13873618 13873819 13873731 Y NA NA NA NA NA NA ERCC4 138195 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 14423320 14423633 14423477 Y NA NA NA NA NA NA MKL2 260142 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 14423689 14423899 14423743 Y NA NA NA NA NA NA MKL2 260511 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 15670640 15671032 15670885 Y NA NA NA NA NA NA KIAA0430 63991 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr16 16214258 16214439 16214353 Y ABCC1 NA ABCC6 IMR90 Hi-C 24141950 ABCC1 172824 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 17476901 17477384 17477246 Y NA NA NA NA NA NA XYLT1 85354 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 18153312 18153685 18153560 Y NA NA NA NA NA NA XYLT1 590574 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr16 19103583 19103758 19103655 Y NA COQ7,ITPRIPL2 NA NA NA NA ITPRIPL2 19496 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 21637887 21638686 21638408 Y CRYM,METTL9,IGSF6 METTL9 NA NA NA NA METTL9 31348 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 22046502 22046742 22046619 Y NA C16orf52 NA NA NA NA C16orf52 29543 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 22082738 22082854 22082796 Y OTOA NA NA NA NA NA C16orf52 65779 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 22202596 22202946 22202679 Y POLR3E,CDR2 EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 12657 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 22211037 22211162 22211126 Y NA EEF2K POLR3E,EEF2K MCF7,K562 ChIA-PET 22265404 EEF2K 4441 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 22406960 22407340 22407096 Y NA CDR2 POLR3E,CDR2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDR2 39146 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 23069980 23070197 23070103 Y USP31 NA NA NA NA NA USP31 88394 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 25060889 25061147 25061001 Y NA ARHGAP17 NA NA NA NA ARHGAP17 35902 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 27329776 27330351 27329940 Y JMJD5,JMJD5,KIAA0556,IL21R,IL4R IL4R NA NA NA NA IL4R 6787 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 27338285 27338559 27338369 Y KIAA0556,IL4R IL4R NA NA NA NA IL4R 15296 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 27546889 27546978 27546937 Y NA GTF3C1,KIAA0556 NA NA NA NA GTF3C1 12256 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 30458943 30459145 30459094 Y SEPHS2 ZNF771,DCTPP1,SEPHS2 NA NA NA NA SEPHS2 3441 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 30645556 30645885 30645776 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF689 12223 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 30876491 30876606 30876548 Y NA MIR4519,BCL7C,CTF1 NA NA NA NA MIR4519 8038 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 30885980 30886229 30886174 Y ZNF689,PHKG2,RNF40,C16orf93,ZNF668 MIR4519,BCL7C,CTF1,FBXL19 NA NA NA NA MIR4519 1336 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 31888684 31889219 31888998 Y ARMC5,ZNF267 ZNF267 NA NA NA NA ZNF267 5605 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 31905713 31906088 31906002 Y ZNF267 ZNF267 NA NA NA NA ZNF267 22634 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 33509690 33509798 33509723 Y NA NA NA NA NA NA ZNF267 1626611 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 34377841 34378195 34377988 Y NA NA NA NA NA NA ZNF267 2494762 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr16 34441880 34442279 34442062 Y NA NA NA NA NA NA ZNF267 2558801 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 46823783 46824029 46823881 Y NA C16orf87 NA NA NA NA C16orf87 39294 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 48400459 48400723 48400564 Y LONP2,N4BP1,SIAH1 NA NA NA NA NA SIAH1 79590 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 48610830 48611144 48611073 Y SIAH1,N4BP1 N4BP1 NA NA NA NA N4BP1 40915 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 49044263 49044492 49044405 Y NA NA NA NA NA NA N4BP1 392204 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 49056369 49056621 49056485 Y NA NA NA NA NA NA N4BP1 404310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 53165497 53165808 53165602 Y NA NA NA NA NA NA CHD9 78552 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 56641054 56641530 56641359 Y MT2A,MT1E MT3,MT2A,MT1L,MT1E,MT1M,MT1A,MT1F NA NA NA NA MT2A 943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 56644047 56644457 56644379 Y NLRC5,HERPUD1 MT3,MT2A,MT1L,MT1E,MT1M,MT1A,MT1F NA NA NA NA MT2A 3936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 57294233 57294672 57294611 Y CPNE2,GPR56 ARL2BP,PLLP NA NA NA NA ARL2BP 17223 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 57428268 57428658 57428438 Y GPR56 CCL22 NA NA NA NA CCL22 37584 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 57717053 57717380 57717096 Y FAM192A,ZNF319,GPR97 NA NA NA NA NA KATNB1 50262 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr16 58555953 58556233 58556187 Y NA SETD6 NA NA NA NA SETD6 8570 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 65337559 65337576 65337568 Y NA NA NA NA NA NA LINC00920 1102851 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 66906996 66907469 66907329 Y SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2 NAE1,PDP2 NA NA NA NA NAE1 1837 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr16 66960903 66961306 66961106 Y PLEKHG4,FHOD1,CBFB,RRAD RRAD,FAM96B,CES2 NA NA NA NA RRAD 3356 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 66988106 66988414 66988274 Y NA RRAD,FAM96B,CES2,CES4A NA NA NA NA CES2 21759 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 67278264 67278626 67278472 Y RRAD,C16orf70,FAM65A,ATP6V0D1,ACD,LRRC29,LRRC29,PLEKHG4,FHOD1 LRRC29,TMEM208,SLC9A5,FHOD1,PLEKHG4 NA NA NA NA FHOD1 935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 67435763 67435871 67435819 Y NA TPPP3,ZDHHC1,HSD11B2 NA NA NA NA TPPP3 10325 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 67891676 67892114 67891889 Y RLTPR,ACD,PSMB10,NFATC3,EDC4,THAP11 THAP11,NUTF2,CENPT,EDC4,PSKH1 NA NA NA NA CENPT 11962 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 68271348 68271876 68271591 Y TSNAXIP1,SLC12A4,ESRP2 ESRP2,PLA2G15,SLC7A6 NA NA NA NA ESRP2 1343 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr16 68306774 68307131 68306843 Y RANBP10,THAP11,EDC4,PSMB10,DPEP2,NFATC3,ZFP90,SLC7A6,SLC7A6OS,PRMT7 ESRP2,PLA2G15,SLC7A6,SLC7A6OS,PRMT7 NA NA NA NA SLC7A6 10341 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 68465013 68465120 68465067 Y NA NA NA NA NA NA ZFP90 96873 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 68794775 68795028 68794920 Y NA CDH1 NA NA NA NA CDH1 25647 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 68824913 68825217 68824976 Y NA NA NA NA NA NA CDH1 55785 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69019845 69020210 69019891 Y NA NA CHTF8,HAS3 IMR90 Hi-C 24141950 HAS3 117257 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69345968 69346332 69346034 Y NA VPS4A,PDF,NIP7,COG8 NA NA NA NA VPS4A 2709 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69444205 69444538 69444372 Y NA TERF2,CYB5B NFAT5,CYB5B,TERF2,COG8,NIP7,TMED6,MIR1538,NQO1,WWP2,NOB1 IMR90 Hi-C 24141950 TERF2 3731 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69506405 69506529 69506498 Y NA CYB5B NA NA NA NA CYB5B 49977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69563572 69563696 69563627 Y NA NFAT5 NFAT5,CYB5B,TERF2,MIR1538 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAT5 33301 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69564577 69564882 69564731 Y WWP2 NFAT5 NFAT5,CYB5B,TERF2,MIR1538 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAT5 32115 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69751128 69751528 69751345 Y PDF,TERF2,NQO1 NQO1,NOB1,WWP2 NA NA NA NA NQO1 7326 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69761641 69762033 69761837 Y NA NQO1,NOB1,WWP2 NA NA NA NA NQO1 2787 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 69790577 69791500 69790768 Y PDF,NIP7,NOB1 NQO1,NOB1,WWP2 NA NA NA NA WWP2 2709 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr16 71828659 71828769 71828714 Y NA SNORD71,AP1G1,ATXN1L,IST1 NA NA NA NA AP1G1 12335 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 72459158 72459630 72459377 Y NA NA NA NA NA NA TXNL4B 332828 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 72671878 72672163 72672013 Y NA NA NA NA NA NA ZFHX3 419434 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 73067289 73067686 73067494 Y NA ZFHX3 NA NA NA NA ZFHX3 23911 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 73102955 73103191 73103082 Y ZFHX3 ZFHX3 ZFHX3,HTA IMR90 Hi-C 24141950 ZFHX3 11358 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 74353064 74353398 74353241 Y FA2H PSMD7,RP11-252A24.2 NA NA NA NA PSMD7 24391 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 74777612 74777799 74777727 Y NA MLKL,FA2H NA NA NA NA FA2H 28930 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 74901429 74901821 74901545 Y NA NA NA NA NA NA FA2H 94700 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr16 75034712 75035106 75034867 Y NA ZNRF1,WDR59 NA NA NA NA WDR59 2641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 75410566 75410863 75410755 Y BCAR1 NA NA NA NA NA CFDP1 54520 CAGE HCC1806 hg19 FANTOM5 2.58991136108099 chr16 76269107 76269317 76269211 Y NA RPL18P13 NA NA NA NA RPL18P13 1586 CAGE HCC1806 hg19 FANTOM5 4.47348326004898 chr16 81311371 81311608 81311483 Y NA GAN NA NA NA NA GAN 34949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 81434776 81434850 81434813 Y NA CMIP NA NA NA NA CMIP 41925 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 81436864 81437191 81437044 Y NA CMIP NA NA NA NA CMIP 39584 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 81634791 81634955 81634874 Y GAN NA NA NA NA NA PLCG2 135747 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 81649296 81649780 81649593 Y NA NA NA NA NA NA PLCG2 120922 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 81785976 81786155 81786044 Y PLCG2,CMIP,CMIP PLCG2 ATMIN,PKD1L2,GAN,BCMO1,MIR4720 IMR90 Hi-C 24141950 PLCG2 15274 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 82224093 82224472 82224216 Y MPHOSPH6 MPHOSPH6 HSD17B2,MPHOSPH6 IMR90 Hi-C 24141950 MPHOSPH6 22262 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 82685978 82686417 82686161 Y NA CDH13 HSBP1 IMR90 Hi-C 24141950 CDH13 27570 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 82687139 82687406 82687299 Y NA CDH13 HSBP1 IMR90 Hi-C 24141950 CDH13 28731 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 83835897 83836084 83835978 Y NA HSBP1 HSBP1 IMR90 Hi-C 24141950 HSBP1 3364 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 84393830 84394115 84393945 Y OSGIN1,CRISPLD2,COTL1 ATP2C2 ATP2C2 MCF7 ChIA-PET 22265404 ATP2C2 6018 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 84424110 84424272 84424217 Y NECAB2 ATP2C2 NA NA NA NA ATP2C2 23977 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 84624738 84624752 84624744 Y HSDL1,COTL1 COTL1 NA NA NA NA COTL1 24931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 84628696 84628964 84628830 Y ZDHHC7,KIAA0513,KLHL36,CRISPLD2,COTL1 COTL1 NA NA NA NA COTL1 20719 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 84676809 84677221 84677048 Y KIAA1609 COTL1,KLHL36 KIAA1609,COTL1,USP10,KLHL36,ZDHHC7 IMR90 Hi-C 24141950 KLHL36 2910 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 84799622 84799923 84799772 Y KLHL36 NA NA NA NA NA CRISPLD2 51667 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 84931631 84931857 84931741 Y ZDHHC7,KIAA0513,COTL1,CRISPLD2 NA NA NA NA NA CRISPLD2 80041 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85202555 85203049 85202710 Y NA NA NA NA NA NA KIAA0513 143180 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr16 85264175 85264500 85264259 Y NA NA LOC400548,FAM92B IMR90 Hi-C 24141950 KIAA0513 204800 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85418434 85418651 85418593 Y NA NA LOC727710,LINC00311,KIAA0182,GINS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GINS2 303028 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85548685 85548970 85548791 Y NA NA KIAA0182 IMR90 Hi-C 24141950 GINS2 172709 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85558121 85558453 85558347 Y KIAA0182,KIAA0182 NA KIAA0182,LOC727710 IMR90 Hi-C 24141950 GINS2 163226 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85586938 85587370 85587020 Y NA NA LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GINS2 134309 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85606114 85606473 85606294 Y NA NA LINC00311,FAM92B IMR90 Hi-C 24141950 GINS2 115206 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 85751381 85751721 85751674 Y NA GINS2,C16orf74 NA NA NA NA GINS2 29702 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 86587305 86587716 86587504 Y NA MTHFSD,FOXC2 NA NA NA NA MTHFSD 464 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 86609499 86609840 86609550 Y FOXC2 MTHFSD,FOXC2 NA NA NA NA FOXC2 10642 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 86653031 86653193 86653112 Y NA NA FOXL1,FOXC2 IMR90 Hi-C 24141950 FOXC2 54174 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 86664163 86664323 86664252 Y NA NA FOXL1,C16orf95 IMR90 Hi-C 24141950 FOXC2 65306 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr16 86795224 86795595 86795410 Y NA NA FOXL1,FLJ30679,MTHFSD,C16orf95,FOXC2,FBXO31 IMR90 Hi-C 24141950 FOXC2 196367 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 86855510 86855797 86855532 Y NA NA FOXL1,FOXC2,MTHFSD,FLJ30679 IMR90 Hi-C 24141950 FOXC2 256653 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 87812654 87813065 87812978 Y NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 15056 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 87823236 87823449 87823367 Y FBXO31,CA5A KLHDC4 JPH3,KLHDC4,ZCCHC14,SLC7A5,CA5A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 25638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 87823592 87823837 87823720 Y NA KLHDC4 JPH3,KLHDC4,ZCCHC14,SLC7A5,CA5A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 25994 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 87839693 87840050 87839856 Y SLC7A5 KLHDC4 SLC7A5 MCF7 ChIA-PET 22265404 KLHDC4 42095 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 87870717 87871153 87871035 Y NA SLC7A5 NA NA NA NA SLC7A5 29941 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 87886258 87886670 87886593 Y MAP1LC3B,ZCCHC14,BANP,BANP,BANP SLC7A5 NA NA NA NA SLC7A5 14424 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 87978906 87979489 87979213 Y ZCCHC14,BANP,BANP BANP CA5A,KLHDC4 MCF7,K562 ChIA-PET 22265404 BANP 1361 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 88474264 88474567 88474378 Y BANP,BANP,BANP,CYBA ZFPM1 BANP,CA5A,ZNF469 IMR90 Hi-C 24141950 ZFPM1 43158 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 88771579 88772211 88771675 Y ACSF3,ZFPM1,ZC3H18,CYBA,GALNS,CBFA2T3,SNAI3,RNF166,RNF166,RNF166 MVD,SNAI3,RNF166,CTU2 NA NA NA NA CTU2 708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 89086731 89086969 89086798 Y NA CBFA2T3,CTD-2555A7.2 ACSF3,CBFA2T3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CTD-2555A7.2 30404 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 89268043 89268411 89268231 Y NA ZNF778 NA NA NA NA ZNF778 13707 CAGE HCC1806 hg19 FANTOM5 18.1293795275669 chr16 89313669 89314138 89313993 Y ZNF276,ZNF778 ZNF778 NA NA NA NA ZNF778 31551 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr16 89380978 89381130 89380989 Y ZNF276,ZNF276,SPATA2L,ANKRD11,ZNF778 NA NA NA NA NA ZNF778 98860 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 89392350 89392997 89392648 Y NA NA NA NA NA NA ZNF778 110232 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 89406185 89406252 89406205 Y NA NA NA NA NA NA ZNF778 124067 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 89423849 89423969 89423923 Y CBFA2T3,ZNF276,SPATA2L,ANKRD11 NA NA NA NA NA ANKRD11 131000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 89468980 89469266 89469225 Y NA NA NA NA NA NA ANKRD11 85703 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 89507848 89508195 89508050 Y ZNF778 ANKRD11,SPG7 NA NA NA NA ANKRD11 46774 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr16 89555521 89555997 89555713 Y ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,C16orf7,ANKRD11 ANKRD11,SPG7 NA NA NA NA SPG7 196 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 89571786 89572109 89572034 Y ACSF3,ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,ANKRD11 ANKRD11,SPG7 NA NA NA NA SPG7 16461 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 89579992 89580270 89580045 Y ACSF3,ZNF778,DBNDD1,ZNF276,SPG7 ANKRD11,SPG7,RPL13,SNORD68 NA NA NA NA SPG7 24667 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr16 90087429 90087721 90087595 Y TUBB3,DBNDD1,PRDM7 GAS8,DBNDD1 NA NA NA NA DBNDD1 2893 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr16 90143699 90144065 90143926 Y C16orf55,SPATA2L,ZNF276,C16orf7,ZNF276,TCF25 NA LOC100130015,GAS8 MCF7 ChIA-PET 22265404 DBNDD1 59163 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 817943 818099 818016 Y FAM57A NA NA NA NA NA NXN 62911 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 1391218 1391783 1391434 Y NA CRK,MYO1C,INPP5K,PITPNA-AS1 NA NA NA NA MYO1C 2323 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 1953067 1954207 1953327 Y TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1 RTN4RL1,DPH1,OVCA2,HIC1 NA NA NA NA HIC1 1241 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 1979194 1979509 1979218 Y NA DPH1,OVCA2,HIC1 NA NA NA NA HIC1 23746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 2087949 2088276 2088112 Y NA NA NA NA NA NA SRR 116401 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 2300026 2300553 2300288 Y RAP1GAP2,PAFAH1B1,MNT MNT NA NA NA NA MNT 1859 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 2302778 2303366 2303033 Y SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT MNT NA NA NA NA MNT 366 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 2795960 2796135 2796054 Y NA NA NA NA NA NA RAP1GAP2 117610 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 3791812 3792145 3792008 Y GSG2 C17orf85,CAMKK1 NA NA NA NA CAMKK1 4040 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 4118580 4118797 4118689 Y NA ANKFY1 NA NA NA NA ANKFY1 46477 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 4204226 4204625 4204419 Y CAMKK1 ANKFY1 NA NA NA NA ANKFY1 38952 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 4297689 4298014 4297723 Y NA UBE2G1 UBE2G1,SPNS3,ANKFY1,ZZEF1,CYB5D2 IMR90 Hi-C 24141950 UBE2G1 29766 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 4386875 4387235 4387089 Y NA SPNS2 NA NA NA NA SPNS2 12898 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 4430442 4430571 4430507 Y ZZEF1,ZMYND15,ZMYND15,C17orf107,ARRB2 SPNS2,MYBBP1A,GGT6 NA NA NA NA MYBBP1A 26355 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 4753672 4753828 4753714 Y UBE2G1,ARRB2,CXCL16,ZMYND15,ZMYND15,MINK1,RNF167,C17orf107 PLD2,MINK1,C17orf107 NA NA NA NA MINK1 18989 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 4811647 4812042 4811731 Y NA C17orf107,RNF167,SLC25A11,PFN1 NA NA NA NA C17orf107 10934 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 4812526 4812616 4812571 Y SMTNL2,ZNF232,KIF1C C17orf107,RNF167,SLC25A11,PFN1 NA NA NA NA C17orf107 11813 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 5430157 5430402 5430333 Y NLRP1 MIS12,DERL2 NA NA NA NA DERL2 42026 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 5455197 5455437 5455334 Y ZFP3,ZNF232,NLRP1 NA MIS12,DERL2 IMR90 Hi-C 24141950 NLRP1 65307 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 6814987 6815378 6815170 Y DLG4 NA NA NA NA NA ALOX12P2 59807 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 6821400 6821836 6821600 Y NA NA NA NA NA NA ALOX12P2 66220 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 6822767 6822872 6822855 Y NA NA NA NA NA NA ALOX12P2 67587 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 6822879 6823265 6823073 Y NA NA NA NA NA NA ALOX12P2 67699 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 7737438 7738736 7737971 Y ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 20328 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 7738822 7740614 7739046 Y ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 18450 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr17 7745337 7745870 7745591 Y NA CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 13194 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 7745915 7746944 7746139 Y NA CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 12120 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr17 7746991 7747556 7747325 Y POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 11508 CAGE HCC1806 hg19 FANTOM5 12.243217343292 chr17 8029634 8030116 8029995 Y NA HES7,PER1,VAMP2,SNORD118,TMEM107 NA NA NA NA HES7 4224 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr17 8056609 8057167 8057155 Y NA HES7,PER1,VAMP2,SNORD118,TMEM107,C17orf59 NA NA NA NA PER1 657 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 8090038 8090540 8090163 Y NA PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,LINC00324 NA NA NA NA C17orf59 1024 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 8095551 8095762 8095658 Y KDM6B,KCNAB3,CTC1,VAMP2 PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,LINC00324 NA NA NA NA C17orf59 3987 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 8103328 8103700 8103595 Y NA PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,LINC00324,PFAS,CTC1 NA NA NA NA AURKB 8218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 9155924 9156306 9156115 Y PIK3R5 NA NA NA NA NA PIK3R5 288895 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 10220640 10220911 10220834 Y GAS7,MYH4 NA NA NA NA NA RPS27AP1 60561 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 10237288 10237551 10237420 Y MYH4 NA NA NA NA NA RPS27AP1 77209 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 13445928 13446299 13446210 Y NA NA NA NA NA NA HS3ST3A1 56945 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 14206970 14207459 14207274 Y HS3ST3B1 HS3ST3B1 NA NA NA NA HS3ST3B1 4570 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 14212324 14213048 14212775 Y HS3ST3B1 HS3ST3B1 NA NA NA NA HS3ST3B1 9924 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 15787021 15787553 15787332 Y ZSWIM7,TTC19,ADORA2B NA NA NA NA NA ADORA2B 58678 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 15850564 15850918 15850801 Y ADORA2B ADORA2B,TTC19 NA NA NA NA ADORA2B 4333 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 15869590 15869983 15869922 Y NA ADORA2B,TTC19,ZSWIM7 NA NA NA NA ADORA2B 23359 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 15923170 15923610 15923287 Y FAM18B2,ZNF286A,NCOR1,TTC19,ZSWIM7 TTC19,ZSWIM7 NA NA NA NA ZSWIM7 22139 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 15925706 15925935 15925791 Y FAM18B2,PIGL,NCOR1,TTC19,ZSWIM7 TTC19,ZSWIM7 NA NA NA NA ZSWIM7 24675 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 15959345 15959465 15959410 Y FAM18B2,ZNF286A,NCOR1,PIGL,NCOR1,C17orf76,TTC19,ZSWIM7 NA NA NA NA NA ZSWIM7 58314 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 16355497 16355695 16355534 Y TTC19,PIGL NA NA NA NA NA UBB 73385 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 16374519 16374788 16374546 Y NA NA NA NA NA NA UBB 92407 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 16796690 16796969 16796791 Y CCDC144A,COPS3 NA NA NA NA NA MPRIP 146890 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 16944636 16944769 16944688 Y NA MPRIP NA NA NA NA MPRIP 777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 17597479 17598220 17598134 Y ALKBH5,FLCN,COPS3 RAI1 NA NA NA NA RAI1 14692 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 17641556 17641857 17641643 Y MYO15A NA NA NA NA NA RAI1 58769 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 17655489 17655938 17655636 Y DRG2,ALKBH5,COPS3,MED9 NA NA NA NA NA RAI1 72702 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 17743258 17743857 17743527 Y SMCR8 SREBF1 NA NA NA NA SREBF1 4933 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 17766830 17766899 17766864 Y LLGL1 SREBF1 NA NA NA NA SREBF1 28505 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 17861466 17861608 17861562 Y SMCR8 TOM1L2,LRRC48 NA NA NA NA TOM1L2 12128 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 19141562 19141875 19141665 Y RNF112,EPN2 NA NA NA NA NA SNORD3D 127613 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 19627830 19628049 19627942 Y MAPK7,MAPK7 SLC47A2,ALDH3A1 NA NA NA NA SLC47A2 7538 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 20755696 20755942 20755820 Y NA RP11-344E13.3,CCDC144NL NA NA NA NA RP11-344E13.3 13804 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 20814751 20814975 20814753 Y KCNJ18 RP11-344E13.3,CCDC144NL NA NA NA NA CCDC144NL 17298 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 21002403 21002809 21002523 Y KCNJ18 DHRS7B USP22,C17orf103 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DHRS7B 21868 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 21179100 21179414 21179208 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 C17orf103,MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 6570 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 21189600 21190105 21189864 Y MAP2K3,MAP2K3 C17orf103,MAP2K3 NA NA NA NA MAP2K3 3616 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 21515861 21516199 21516031 Y NA C17orf51 CCDC144NL K562 ChIA-PET 22265404 C17orf51 40139 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 25409900 25410125 25410078 Y NA NA NA NA NA NA WSB1 208977 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 25410571 25410806 25410743 Y NA NA NA NA NA NA WSB1 208296 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 25416172 25416581 25416426 Y NA NA NA NA NA NA WSB1 202521 CAGE HCC1806 hg19 FANTOM5 7.53428759587197 chr17 25568498 25568933 25568830 Y NA NA KSR1,WSB1,MIR4522 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 50169 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 25680632 25681097 25680982 Y NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 61530 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 25784873 25785075 25784939 Y WSB1,LGALS9 KSR1 KSR1 MCF7 ChIA-PET 22265404 KSR1 3203 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 25981784 25982180 25981982 Y NA LGALS9 NA NA NA NA LGALS9 26960 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 26368091 26368384 26368254 Y NA NLK NA NA NA NA NLK 1328 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 26578258 26578420 26578387 Y NA NA NA NA NA NA TMEM97 65701 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 27506307 27506816 27506504 Y TLCD1,TLCD1,TRAF4,GIT1,MYO18A MYO18A NA NA NA NA MYO18A 877 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 28049478 28050072 28049903 Y NUFIP2,TAOK1,SSH2 NA NA NA NA NA CORO6 101553 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 29423002 29423667 29423241 Y NA NF1 NA NA NA NA NF1 3057 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 30588630 30588823 30588726 Y NA NA NA NA NA NA C17orf75 86219 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 30724674 30725107 30724769 Y RHOT1 C17orf75,ZNF207,PSMD11 NA NA NA NA PSMD11 44172 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 33407531 33407770 33407731 Y NA RFFL,RAD51D NA NA NA NA RFFL 6568 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 33572314 33572864 33572356 Y NA SLFN5 NA NA NA NA SLFN5 4259 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 34160214 34160648 34160302 Y NA MMP28,TAF15 NA NA NA NA TAF15 25755 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 35296825 35297078 35296886 Y LHX1 RP11-445F12.1,AATF NA NA NA NA RP11-445F12.1 4865 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 35425108 35425365 35425237 Y NA NA NA NA NA NA AATF 120933 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 36571646 36572076 36571709 Y C17orf96 ARHGAP23 NA NA NA NA ARHGAP23 10586 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 36859613 36860666 36860145 Y NA C17orf96,CISD3,PCGF2,PSMB3 NA NA NA NA MLLT6 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 37896808 37897181 37897022 Y GRB7,GRB7,GRB7,GRB7 PGAP3,MIEN1,GRB7 NA NA NA NA GRB7 4628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 37910411 37911394 37910787 Y FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3 MIEN1,GRB7 NA NA NA NA GRB7 18231 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 38095307 38095463 38095385 Y NA ORMDL3,PSMD3 NA NA NA NA ORMDL3 13453 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 38440755 38440955 38440855 Y NA CDC6,RARA NA NA NA NA CDC6 930 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 38655848 38656036 38655907 Y GJD3,IGFBP4,TNS4 NA NA NA NA NA TNS4 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 38674878 38675250 38674921 Y TMEM99,TMEM99,TMEM99,CDC6,TOP2A,TNS4 TNS4 IGFBP4,KRT42P,CCR7,RARA,GJD3,TOP2A,TNS4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNS4 19029 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 38754802 38755132 38754943 Y NA SMARCE1 KRT14,KRT42P,KRT26,GJD3,TOP2A,TNS4,KRT27,KRT28,RARA,CDC6,IGFBP4,CCR7,SMARCE1,KRT222,KRT9,LOC147093,KRT17 IMR90 Hi-C 24141950 SMARCE1 47628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39218168 39218609 39218458 Y NA KRTAP3-1 NA NA NA NA KRTAP3-1 44592 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39662733 39662908 39662821 Y JUP,KRTAP3-1,KRT9,KRT36,KRT13,KRT19 AC019349.5,KRT13,KRT15,KRT19 NA NA NA NA KRT13 2776 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39683248 39683750 39683386 Y NA AC019349.5,KRT13,KRT15,KRT19 NA NA NA NA KRT19 688 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39735892 39736012 39735959 Y JUP,KRT36,KRT13,KRT15,KRT19,KRT9,KRT17,KRT16,KRT14 KRT14,KRT16,KRT17 NA NA NA NA KRT14 5161 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39782029 39782271 39782148 Y JUP,KRT36,KRT13,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17 KRT14,KRT16,KRT17 NA NA NA NA KRT17 2935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39807728 39808143 39807934 Y JUP,KRT36,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17 KRT16,KRT17,EIF1 KRT19,KRT15,LOC147093 MCF7 ChIA-PET 22265404 KRT17 28634 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39810156 39810822 39810530 Y JUP,KRT36,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17 KRT16,KRT17,EIF1 KRT19,KRT15,LOC147093,RARA,EIF1,KRT24,KRT28,TMEM99,KRT10,KRTAP2-4,LOC730755,KRTAP2-2,KRT9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KRT17 31062 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 39811785 39812247 39811996 Y JUP,KRT37,KRT15,KRT19,KRT14,KRT16,KRT17 KRT16,KRT17,EIF1 KRT19,KRT15,LOC147093,RARA,EIF1,KRT24,KRT28,TMEM99,KRT10,KRTAP2-4,LOC730755,KRTAP2-2,KRT9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EIF1 30890 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39822130 39822941 39822323 Y NA KRT17,EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 20196 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 39949517 39949745 39949566 Y KRT36,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17,JUP JUP,LEPREL4,FKBP10 NA NA NA NA JUP 8334 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 41173099 41173334 41173293 Y NAGLU,VAT1 RUNDC1,RPL27,IFI35,VAT1,RND2 NA NA NA NA VAT1 1806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 41827198 41827473 41827372 Y NA SOST,DUSP3 NA NA NA NA SOST 6683 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 42276572 42276897 42276785 Y TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3 TMUB2,ATXN7L3,UBTF NA NA NA NA ATXN7L3 1091 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 42404001 42404290 42404282 Y C17orf65,TMUB2,TMUB2,UBTF,ITGA2B,SLC4A1,SLC25A39 SLC25A39,GRN,FAM171A2 NA NA NA NA SLC25A39 3763 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 42634020 42634172 42634095 Y TMUB2,TMUB2,GRN,FZD2 FZD2 NA NA NA NA FZD2 1095 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 42797981 42798248 42798116 Y CCDC43 CCDC43,DBF4B,RP11-1072C15.1,ADAM11 NA NA NA NA RP11-1072C15.1 2016 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 43018379 43018606 43018493 Y NA CCDC103,EFTUD2,KIF18B,C1QL1 NA NA NA NA KIF18B 4476 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 43389475 43389771 43389724 Y FMNL1,PLEKHM1,MAP3K14 MAP3K14 TEX34,LOC100133991 IMR90 Hi-C 24141950 MAP3K14 2643 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 43919032 43919225 43919129 Y STH NA NA NA NA NA MAPT 50523 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 44113965 44114105 44114069 Y KIAA1267,KIAA1267 NA NA NA NA NA MAPT 144217 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 44131950 44132178 44132002 Y KIAA1267,KIAA1267 NA NA NA NA NA MAPT 162202 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 44155479 44155559 44155517 Y NA NA NA NA NA NA MAPT 185731 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 44240473 44240874 44240856 Y NA NA NA NA NA NA MAPT 270725 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 44848199 44848613 44848371 Y NA NA NA NA NA NA RPS7P11 50666 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 44848812 44849347 44849259 Y NA NA NA NA NA NA RPS7P11 51279 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 46102426 46102830 46102617 Y NA COPZ2,NFE2L1 NA NA NA NA COPZ2 10562 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 47270202 47270509 47270359 Y CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3 PHOSPHO1 NA NA NA NA PHOSPHO1 35619 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 48139711 48140314 48140012 Y XYLT2,LRRC59,EPN3,ITGA3 ITGA3,PDK2 NA NA NA NA ITGA3 8379 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 48255388 48256117 48255676 Y NA PPP1R9B NA NA NA NA PPP1R9B 29397 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 48996944 48997365 48997235 Y UTP18,RSAD1,TOB1 NA LOC400604,TOB1,WFIKKN2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 53605 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 53315618 53315983 53315841 Y HLF NA STXBP4,HLF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MMD 181370 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 56587640 56587744 56587729 Y PPM1E,DYNLL2,MKS1,SEPT4,MTMR4 MTMR4,SEPT4 NA NA NA NA MTMR4 5522 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 56736656 56737064 56736885 Y MTMR4,SEPT4,SEPT4,PPM1E RNU1-60P,RNU1-108P,RNU1-85P,RAD51C SEPT4,C17orf47 K562,MCF7 ChIA-PET 22265404 RNU1-60P 1990 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57200500 57200626 57200599 Y GDPD1 AC099850.1,TRIM37,SKA2,PRR11 NA NA NA NA TRIM37 18218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57831888 57832338 57832062 Y VMP1,RNFT1 VMP1,PTRH2 NA NA NA NA PTRH2 48901 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57841314 57841767 57841379 Y NA NA NA NA NA NA PTRH2 58327 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57860256 57860659 57860446 Y DHX40,VMP1,CA4 NA NA NA NA NA MIR21 55968 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57861698 57862055 57862024 Y RNFT1 NA NA NA NA NA MIR21 54572 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57863159 57864676 57863979 Y NA NA NA NA NA NA MIR21 51951 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 57906379 57907270 57906882 Y RNFT1 MIR21 NA NA NA NA MIR21 9357 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 57962596 57962816 57962625 Y NA MIR21,TUBD1,RPS6KB1 NA NA NA NA TUBD1 5488 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 59939507 59939855 59939761 Y BRIP1 BRIP1 NA NA NA NA BRIP1 625 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 60868052 60868313 60868162 Y NA NA NA NA NA NA MRC2 165290 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 60897286 60897580 60897414 Y NA NA NA NA NA NA MRC2 194524 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 61043121 61043648 61043243 Y NA NA NA NA NA NA MRC2 340359 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 61282907 61283291 61283099 Y NA NA NA NA NA NA CYB561 238448 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 61352706 61353153 61352892 Y MAP3K3,LIMD2 NA MIR548W,MARCH10 IMR90 Hi-C 24141950 CYB561 168586 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 61456495 61456666 61456581 Y NA NA MIR548W,MARCH10,MRC2 IMR90 Hi-C 24141950 CYB561 65073 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 61639369 61639739 61639552 Y NA DCAF7,TACO1 NA NA NA NA DCAF7 13547 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 62159440 62159790 62159613 Y MAP3K3,LIMD2,ICAM2,PECAM1,DDX5,CEP95,ERN1 ERN1 NA NA NA NA ERN1 46389 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 62161129 62161576 62161448 Y MAP3K3,LIMD2,ICAM2,PECAM1,DDX5,ERN1 ERN1 NA NA NA NA ERN1 44603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 62484790 62485162 62485096 Y NA POLG2,MIR3064,CEP95,DDX5 NA NA NA NA POLG2 5992 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 62705157 62705447 62705234 Y SMURF2 SMURF2 SMURF2 IMR90 Hi-C 24141950 SMURF2 48971 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 63030127 63030512 63030385 Y NA GNA13 AMZ2P1 IMR90 Hi-C 24141950 GNA13 20445 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 63053851 63054126 63053975 Y GNA13 GNA13 AMZ2P1 IMR90 Hi-C 24141950 GNA13 2894 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 63119249 63119621 63119552 Y GNA13 RGS9 RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RGS9 11928 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 63160254 63160611 63160482 Y GNA13 RGS9 NA NA NA NA RGS9 28705 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 63639930 63640399 63640359 Y NA NA NA NA NA NA AXIN2 84165 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 63646847 63647018 63646933 Y NA NA NA NA NA NA AXIN2 91082 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 63747410 63747660 63747535 Y CEP112,CEP112,AXIN2 NA NA NA NA NA AXIN2 191645 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 63752923 63753189 63753062 Y NA NA NA NA NA NA AXIN2 197158 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 64194072 64194322 64194164 Y NA CEP112 NA NA NA NA CEP112 7870 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 64301184 64301397 64301241 Y NA PRKCA NA NA NA NA PRKCA 4430 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 64432039 64432445 64432242 Y NA NA NA NA NA NA PRKCA 135285 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 64463185 64463416 64463350 Y NA NA NA NA NA NA PRKCA 166431 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 65318264 65318584 65318454 Y NA PSMD12 NA NA NA NA PSMD12 42159 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 65339190 65339485 65339338 Y BPTF PSMD12,PITPNC1 NA NA NA NA PSMD12 21258 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 65386872 65387224 65386898 Y HELZ,BPTF,PITPNC1 PSMD12,PITPNC1 NA NA NA NA PITPNC1 15297 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 65991969 65992126 65992052 Y NA C17orf58,KPNA2 NA NA NA NA C17orf58 4204 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 66376984 66377775 66377396 Y NA NA WIPI1 IMR90 Hi-C 24141950 WIPI1 73879 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 66509186 66509763 66509535 Y SLC16A6,PRKAR1A,PRKAR1A PRKAR1A NA NA NA NA PRKAR1A 3265 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 67095790 67095894 67095841 Y NA ABCA6 NA NA NA NA ABCA6 40135 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 68750412 68750565 68750489 Y NA NA LOC100499467 IMR90 Hi-C 24141950 KCNJ2 587598 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 68943933 68944102 68944047 Y NA NA NA NA NA NA LOC124685 671017 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70374697 70374707 70374702 Y NA NA SOX9,LOC100499467 IMR90 Hi-C 24141950 RPL32P33 246663 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70395717 70396043 70395724 Y NA NA NA NA NA NA RPL32P33 225327 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70423161 70423493 70423326 Y NA NA NA NA NA NA RPL32P33 197877 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70442621 70442708 70442666 Y SOX9 NA NA NA NA NA RPL32P33 178662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70461830 70461987 70461862 Y NA NA NA NA NA NA RPL32P33 159383 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70462396 70462597 70462589 Y NA NA NA NA NA NA RPL32P33 158773 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70464411 70464702 70464656 Y NA NA NA NA NA NA RPL32P33 156668 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70585200 70585480 70585419 Y NA RPL32P33 NA NA NA NA RPL32P33 35890 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 70585924 70586379 70586141 Y NA RPL32P33 NA NA NA NA RPL32P33 34991 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70587266 70587776 70587444 Y NA RPL32P33 NA NA NA NA RPL32P33 33594 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 70706379 70706638 70706553 Y NA NA NA NA NA NA RPL32P33 85009 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 70892078 70892260 70892135 Y NA NA NA NA NA NA SLC39A11 194591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 71087635 71087942 71087798 Y SLC39A11 SLC39A11 NA NA NA NA SLC39A11 784 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 71287548 71287861 71287762 Y NA CDC42EP4 NA NA NA NA CDC42EP4 18453 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 71301216 71301553 71301269 Y NA CDC42EP4 NA NA NA NA CDC42EP4 4761 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 72745955 72746124 72746086 Y NA SLC9A3R1,NAT9,TMEM104 NA NA NA NA SLC9A3R1 3164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 72746451 72746964 72746655 Y NA SLC9A3R1,NAT9,TMEM104 NA NA NA NA SLC9A3R1 3660 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 72830385 72830471 72830428 Y NA FDXR NA NA NA NA FDXR 36685 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 72978355 72978661 72978434 Y KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L CDR2L,ICT1,KCTD2 CDR2L,ICT1,C17orf28,HN1 MCF7,K562 ChIA-PET 22265404 CDR2L 3066 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 73007152 73007476 73007237 Y RAB37,GRIN2C,C17orf28,CDR2L,SUMO2,NUP85,KCTD2,ARMC7 CDR2L,ICT1,KCTD2,ATP5H NA NA NA NA ICT1 387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 73009835 73009966 73009891 Y NA CDR2L,ICT1,KCTD2,ATP5H NA NA NA NA ICT1 3070 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 73120387 73120767 73120528 Y GRB2,GRB2,CD300LF,HN1,HN1,SLC16A5,NT5C SLC16A5,ARMC7,NT5C,HN1 NA NA NA NA NT5C 5123 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 73333353 73333637 73333600 Y H3F3B,GRB2,GRB2,GGA3 SLC25A19,AC011933.1 NA NA NA NA AC011933.1 19943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 73685500 73685825 73685750 Y GGA3,MIF4GD,SAP30BP,ITGB4,ITGB4 SAP30BP,RECQL5,ITGB4 NA NA NA NA RECQL5 24231 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 73696530 73696897 73696707 Y SAP30BP,ITGB4,ITGB4 SAP30BP,RECQL5,ITGB4 NA NA NA NA ITGB4 18511 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 73718198 73718514 73718306 Y NA ITGB4,GALK1 NA NA NA NA ITGB4 2790 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 74067493 74067877 74067630 Y RNF157,FAM100B EVPL,SRP68,GALR2,EXOC7 NA NA NA NA SRP68 759 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 74128444 74128992 74128680 Y LOC100130933,RECQL5,RECQL5,FOXJ1 EXOC7,FOXJ1 NA NA NA NA FOXJ1 6388 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 74258854 74259227 74259062 Y ST6GALNAC1 ATF4P3 NA NA NA NA ATF4P3 37967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 74583031 74583415 74583256 Y NA SNORD1B,ST6GALNAC2 NA NA NA NA ST6GALNAC2 1993 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 74723995 74724371 74724344 Y FAM100B,UBE2O,METTL23,SRSF2,MFSD11 MXRA7,JMJD6,METTL23,MFSD11,SRSF2 NA NA NA NA METTL23 3083 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 75120383 75120864 75120582 Y JMJD6,SEC14L1,SEC14L1,SEPT9,SEPT9,SEC14L1,SEC14L1 LINC00338,SEC14L1 NA NA NA NA LINC00338,SEC14L1 39585 CAGE HCC1806 hg19 FANTOM5 7.76973408324297 chr17 75282703 75283463 75282995 Y SEPT9,SEPT9 NA NA NA NA NA LINC00338,SEC14L1 201905 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 75284936 75285118 75285041 Y NA NA NA NA NA NA LINC00338,SEC14L1 204138 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 75312591 75312808 75312697 Y NA NA NA NA NA NA LINC00338,SEC14L1 231793 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 75321712 75322201 75321955 Y SEPT9 NA NA NA NA NA LINC00338,SEC14L1 240914 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 75417194 75417582 75417357 Y NA NA NA NA NA NA LINC00338,SEC14L1 336396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 75954393 75954796 75954614 Y NA TNRC6C TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNRC6C 43453 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr17 76147929 76148019 76147974 Y NA TMC6,SYNGR2,TK1,AFMID NA NA NA NA SYNGR2 14620 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76195016 76195360 76195224 Y TMC6,TMC8,SOCS3,PGS1 SYNGR2,TK1,AFMID,BIRC5 BIRC5 IMR90 Hi-C 24141950 BIRC5 12907 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76335027 76335218 76335120 Y CYTH1,SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 18940 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76337607 76338208 76338068 Y USP36,CYTH1,SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 15950 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76356993 76357093 76357047 Y SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 2835 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76649052 76649341 76649203 Y SOCS3,PGS1,USP36,ENGASE,CYTH1 NA NA NA NA NA CYTH1 127038 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76879007 76879631 76879400 Y CYTH1,ENGASE,CANT1,USP36 USP36,TIMP2 NA NA NA NA TIMP2 39838 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 76930060 76930674 76930419 Y NA TIMP2,LGALS3BP TIMP2 MCF7 ChIA-PET 22265404 TIMP2 10591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 77146048 77146259 77146101 Y RBFOX3 NA NA NA NA NA ENGASE 77027 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 77481345 77481685 77481515 Y NA NA NA NA NA NA CBX2 268246 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 77783959 77784243 77784073 Y CBX2,CBX8 CBX2,CBX8,CBX4 NA NA NA NA CBX8 10477 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 77787297 77787609 77787349 Y NA CBX2,CBX8,CBX4 NA NA NA NA CBX8 13815 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 77788517 77788922 77788877 Y NA CBX2,CBX8,CBX4 NA NA NA NA CBX8 15035 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 77967532 77967765 77967641 Y CBX8,CBX4,RNF213,GAA,EIF4A3 TBC1D16,CCDC40 NA NA NA NA TBC1D16 39882 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 78087852 78088239 78088062 Y NA GAA,EIF4A3 NA NA NA NA GAA 14497 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 78121490 78121818 78121740 Y NA GAA,EIF4A3 NA NA NA NA EIF4A3 2508 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 78428203 78429274 78428566 Y NA ENDOV NA NA NA NA ENDOV 41238 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 78552032 78552241 78552117 Y NA RPL32P31,RPTOR NA NA NA NA RPTOR 35413 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 78560725 78560872 78560817 Y NA RPL32P31,RPTOR NA NA NA NA RPTOR 44106 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 78734428 78734929 78734574 Y C17orf56 NA NA NA NA NA RPTOR 217809 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 78806684 78807307 78807121 Y C17orf56 NA NA NA NA NA CHMP6 156091 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 78830209 78830686 78830492 Y NA NA NA NA NA NA CHMP6 132712 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 78900870 78900990 78900942 Y NA NA NA NA NA NA CHMP6 62408 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 79011145 79011369 79011293 Y BAIAP2 CHMP6,BAIAP2 NA NA NA NA BAIAP2 4197 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 79024187 79024380 79024262 Y BAIAP2 BAIAP2 NA NA NA NA BAIAP2 17239 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 79066626 79066874 79066750 Y BAIAP2,TMEM105 NA NA NA NA NA BAIAP2 59678 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 79319325 79319648 79319507 Y FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1 LINC00482,TMEM105 BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM105 16851 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 79319812 79320225 79320116 Y FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1 LINC00482,TMEM105 BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM105 17338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 79360408 79361324 79361141 Y ARHGDIA,ARHGDIA,TSPAN10 NA NA NA NA NA TMEM105 57934 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 79448388 79448678 79448571 Y NPB,AATK,AZI1,BAHCC1 RP13-766D20.1,RP13-766D20.2,ACTG1 NA NA NA NA RP13-766D20.1 29411 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 79451287 79451558 79451462 Y AATK,AZI1,BAHCC1 RP13-766D20.1,RP13-766D20.2,ACTG1 NA NA NA NA RP13-766D20.1 26531 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 79979263 79979824 79979465 Y NA ASPSCR1,LRRC45,STRA13,RAC3,DCXR,GPS1,RFNG,DUS1L NA NA NA NA LRRC45 85 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 80052713 80052821 80052782 Y MRPL12,SLC25A10,GCGR,PCYT2,ASPSCR1,HEXDC,FOXK2,LRRC45,DCXR,DUS1L,FASN GPS1,RFNG,DUS1L,FASN NA NA NA NA FASN 1387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 80056613 80056910 80056718 Y C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN RFNG,DUS1L,FASN NA NA NA NA FASN 2405 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr17 80255299 80255755 80255478 Y SIRT7,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,C17orf62,C17orf62,CSNK1D,SECTM1,CD7 CSNK1D,SECTM1 NA NA NA NA CSNK1D 25692 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 80453708 80453979 80453866 Y LRRC45,DUS1L,FASN,UTS2R,TBCD,FOXK2 C17orf62,NARF,FOXK2 NA NA NA NA FOXK2 21610 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 80454894 80455238 80455175 Y LRRC45,CCDC57,FN3KRP,NARF C17orf62,NARF,FOXK2 NA NA NA NA FOXK2 20351 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr17 80745153 80745621 80745526 Y ZNF750 TBCD NA NA NA NA TBCD 37213 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr17 80794045 80794420 80794166 Y ZNF750 ZNF750 NA NA NA NA ZNF750 2034 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr17 80805995 80806457 80806155 Y NA ZNF750 NA NA NA NA ZNF750 9541 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr17 80832515 80832930 80832613 Y NA ZNF750 NA NA NA NA ZNF750 36061 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr17 80833209 80833609 80833394 Y ZNF750 ZNF750 NA NA NA NA ZNF750 36755 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr17 80834043 80834346 80834307 Y ZNF750 ZNF750 NA NA NA NA ZNF750 37589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 159482 159743 159659 Y CETN1 USP14 NA NA NA NA USP14 3099 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 221277 221425 221379 Y THOC1,ENOSF1,ENOSF1 THOC1 NA NA NA NA THOC1 44625 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 228420 228816 228694 Y THOC1 THOC1 NA NA NA NA THOC1 37234 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 666183 666708 666437 Y THOC1,YES1,ENOSF1,ENOSF1 TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 9843 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 667633 668016 667981 Y THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1 TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 11293 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 781638 782117 782009 Y NA RNU1-109P,YES1 NA NA NA NA RNU1-109P 14019 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 999057 999295 999176 Y NA NA NA NA NA NA YES1 188510 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 2656589 2657177 2656999 Y NA CBX3P2,SMCHD1 NA NA NA NA SMCHD1 2852 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 3624338 3624601 3624482 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 214732 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr18 3624841 3625119 3625035 Y MYL12A,MYL12B,MYL12B,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 215235 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr18 3625326 3625427 3625380 Y NA NA NA NA NA NA TGIF1 215720 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9219810 9220134 9219877 Y NA NA NA NA NA NA ANKRD12 85584 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9548277 9548390 9548335 Y ANKRD12,VAPA,RAB31,PPP4R1 NA NA NA NA NA PPP4R1 64848 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9604214 9604566 9604459 Y NA PPP4R1 NA NA NA NA PPP4R1 8672 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9613164 9613539 9613352 Y NA NA NA NA NA NA PPP4R1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9648954 9649088 9649002 Y PPP4R1 PPP4R1 PPP4R1,VAPA,ANKRD12 IMR90 Hi-C 24141950 PPP4R1 35716 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 9658069 9658457 9658201 Y PPP4R1 PPP4R1,RAB31 PPP4R1,VAPA,ANKRD12 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R1 44831 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 9740164 9740351 9740265 Y NA RAB31 TXNDC2 IMR90 Hi-C 24141950 RAB31 34002 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9743544 9744009 9743684 Y VAPA,RAB31 RAB31 NA NA NA NA RAB31 37382 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 9914998 9915501 9915128 Y PPP4R1,RAB31,VAPA VAPA NA NA NA NA VAPA 2999 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr18 11849903 11850727 11850169 Y MPPE1,CHMP1B CHMP1B NA NA NA NA CHMP1B 508 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 11947272 11947721 11947412 Y CHMP1B MPPE1,IMPA2 IMPA2,GNAL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IMPA2 31303 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 12059774 12060081 12059918 Y NA NA GNAL,IMPA2 IMR90 Hi-C 24141950 IMPA2 80750 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr18 12288068 12288497 12288213 Y NA TUBB6 TUBB6 IMR90 Hi-C 24141950 TUBB6 17171 CAGE HCC1806 hg19 FANTOM5 2.58991136108099 chr18 12330841 12331244 12331045 Y NA TUBB6,AFG3L2 NA NA NA NA TUBB6 25173 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 12606965 12607268 12607096 Y PTPN2,SPIRE1 SPIRE1,PSMG2 NA NA NA NA SPIRE1 48865 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 12641281 12641332 12641311 Y SPIRE1,SPIRE1,PSMG2 SPIRE1,PSMG2 NA NA NA NA SPIRE1 14801 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 12777545 12777688 12777651 Y NA NA NA NA NA NA CEP76 76769 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr18 12839100 12839985 12839163 Y NA NA NA NA NA NA PTPN2 87657 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 13137958 13138425 13138153 Y NA NA NA NA NA NA CEP192 148597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 13609005 13609489 13609376 Y C18orf1 NA NA NA NA NA RNMT 115170 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 19090172 19090203 19090178 Y NA NA NA NA NA NA ESCO1 88642 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 19279600 19279639 19279620 Y NA ABHD3,MIB1 NA NA NA NA ABHD3 3127 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 23624852 23624978 23624915 Y NA SS18 NA NA NA NA SS18 44203 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 23657156 23657540 23657507 Y NA SS18 NA NA NA NA SS18 11641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 24120849 24120961 24120907 Y NA NA NA NA NA NA KCTD1 114404 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 26744101 26744374 26744185 Y NA NA NA NA NA NA DSC3 1876407 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 29232383 29232901 29232639 Y NA NA NA NA NA NA DSG2 156377 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 29542474 29542964 29542885 Y RNF138 TRAPPC8 NA NA NA NA TRAPPC8 11375 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 33093148 33093751 33093628 Y GALNT1 INO80C NA NA NA NA INO80C 17193 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 35000619 35000729 35000675 Y CELF4 NA NA NA NA NA TPGS2 593461 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 37101421 37101610 37101545 Y NA NA NA NA NA NA RPL7AP66 187782 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 38400153 38400634 38400214 Y NA NA NA NA NA NA PIK3C3 1132537 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 38446239 38446490 38446414 Y NA NA NA NA NA NA PIK3C3 1086681 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 43307603 43307620 43307613 Y NA SLC14A1 NA NA NA NA SLC14A1 5511 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 45444466 45444807 45444662 Y NA SMAD2 NA NA NA NA SMAD2 10708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 46481699 46482044 46481791 Y NA SMAD7 SMAD7 K562 ChIA-PET 22265404 SMAD7 6618 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 46547875 46548139 46548027 Y NA NA SMAD7 MCF7 ChIA-PET 22265404 SMAD7 72794 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr18 47834061 47834491 47834223 Y CCDC11,MBD1,MBD1 CCDC11,MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 21387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 51699489 51699550 51699520 Y NA MBD2 NA NA NA NA MBD2 49608 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 51883843 51884006 51883925 Y NA NA NA NA NA NA POLI 90069 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 53041931 53042230 53042160 Y NA NA NA NA NA NA TCF4 287788 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 53332836 53333181 53332979 Y NA TCF4 NA NA NA NA TCF4 2818 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr18 53355940 53355975 53355958 Y NA TCF4 TXNL1,TCF4 IMR90 Hi-C 24141950 TCF4 25922 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 55893671 55893850 55893725 Y MALT1 NA NA NA NA NA NEDD4L 184072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 57566379 57566616 57566437 Y NA PMAIP1 NA NA NA NA PMAIP1 1199 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 60189219 60189514 60189362 Y TNFRSF11A,ZCCHC2 ZCCHC2 NA NA NA NA ZCCHC2 979 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 61033511 61033750 61033687 Y NA BCL2,KDSR NA NA NA NA KDSR 768 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr18 61549883 61550442 61550030 Y VPS4B,SERPINB8,SERPINB2 SERPINB2 SERPINB7 IMR90 Hi-C 24141950 SERPINB2 12957 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 61565801 61566233 61565950 Y NA SERPINB2,HMSD NA NA NA NA SERPINB2 28875 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 65945074 65945279 65945262 Y NA NA LOC643542 IMR90 Hi-C 24141950 CCDC102B 435167 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 72676291 72676559 72676424 Y ZNF407,TSHZ1 NA NA NA NA NA ZADH2 242744 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 72779359 72779673 72779506 Y NA NA NA NA NA NA ZADH2 139630 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 72782580 72783607 72783115 Y ZNF407,ZADH2,TSHZ1 NA NA NA NA NA ZADH2 135696 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr18 74237245 74237630 74237448 Y NA ZNF516,RP11-17M16.1 NA NA NA NA RP11-17M16.1 31768 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 74277239 74277430 74277301 Y NA NA NA NA NA NA RP11-17M16.1 71762 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr18 74556264 74556608 74556436 Y NA ZNF236 NA NA NA NA ZNF236 23701 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr18 74830215 74830809 74830560 Y MBP NA NA NA NA NA ZNF236 297652 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr18 77723013 77723575 77723504 Y HSBP1L1 PQLC1,HSBP1L1 NA NA NA NA HSBP1L1 452 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 289700 289869 289784 Y C2CD4C,C19orf21,PPAP2C,PPAP2C PPAP2C NA NA NA NA PPAP2C 307 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 290136 290651 290316 Y RNF126,GZMM,C19orf21,PPAP2C,PPAP2C PPAP2C NA NA NA NA PPAP2C 743 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 567332 567750 567473 Y NA CDC34,BSG NA NA NA NA BSG 1547 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 751766 752111 751822 Y PPAP2C,PPAP2C,FSTL3,C19orf21 PALM,PTBP1 NA NA NA NA PTBP1 42964 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 782330 783005 782707 Y NA PTBP1,MIR4745,MIR3187 NA NA NA NA PTBP1 12070 CAGE HCC1806 hg19 FANTOM5 3.76714379793599 chr19 1028160 1028923 1028240 Y SBNO2,SBNO2,MIDN,HMHA1,CIRBP,CDC34,GZMM,RNF126,C19orf22,C19orf6,CNN2,ABCA7 WDR18,RNU6-2,CNN2,ABCA7,HMHA1 NA NA NA NA CNN2 3862 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr19 1171027 1171165 1171096 Y NA SBNO2,STK11 NA NA NA NA SBNO2 1117 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 1171933 1172315 1172045 Y NA STK11 NA NA NA NA SBNO2 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 1172839 1173266 1172915 Y CFD,ATP5D,GPX4,GPX4 SBNO2,STK11 NA NA NA NA SBNO2 557 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 1252961 1253429 1253036 Y C19orf22,ARID3A,CNN2,ABCA7,HMHA1,SBNO2,SBNO2,MIDN,CIRBP C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA CIRBP 3955 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 1260732 1261171 1260912 Y NA C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA CIRBP 3348 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 1266359 1266798 1266589 Y NA C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA C19orf24 6228 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 1747200 1747550 1747426 Y PLEKHJ1,DAZAP1,RPS15,ONECUT3 NA TCF3,ONECUT3,ADAMTSL5,PLK5,UQCR11,ATP8B3,REXO1,LOC100288123 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ATP8B3 62725 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 1855247 1855761 1855485 Y SPPL2B,SF3A2,PLEKHJ1,LSM7,C19orf35,NDUFS7,C19orf25,TCF3,ATP8B3,ATP8B3,MOBKL2A,BTBD2,REXO1,SCAMP4,KLF16,CSNK1G2,ADAT3 ATP8B3,REXO1,KLF16,SCAMP4,ADAT3 NA NA NA NA KLF16 5806 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 2061356 2061737 2061654 Y SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A BTBD2,MKNK2,IZUMO4,MOB3A NA NA NA NA MKNK2 12113 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 2543618 2543970 2543682 Y DOT1L,GADD45B NA NA NA NA NA GADD45B 69498 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 2545643 2546037 2545824 Y DOT1L,GADD45B,GNG7 NA NA NA NA NA GADD45B 71523 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 2549602 2550221 2549903 Y DOT1L,GADD45B NA NA NA NA NA GADD45B 75482 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 2620825 2621136 2620936 Y DOT1L,OAZ1,C19orf35,GADD45B NA NA NA NA NA GNG7 79571 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 2695163 2695542 2695477 Y LINGO3,GNG7 GNG7,DIRAS1,SLC39A3 NA NA NA NA GNG7 5165 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 3035530 3035851 3035686 Y NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2 TLE2,AES NA NA NA NA TLE2 9782 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 3520804 3521051 3520913 Y NA DOHH,FZR1,HMG20B NA NA NA NA FZR1 16533 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 4053092 4053572 4053301 Y CCDC94,ZBTB7A PIAS4,ZBTB7A NA NA NA NA ZBTB7A 11371 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 4634649 4634985 4634807 Y CCDC94,SEMA6B,TICAM1 TNFAIP8L1,C19orf10 NA NA NA NA TNFAIP8L1 2545 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 4636294 4636441 4636384 Y ANKRD24,SH3GL1,SH3GL1,SEMA6B,TICAM1,TNFAIP8L1,TNFAIP8L1 TNFAIP8L1,C19orf10 NA NA NA NA TNFAIP8L1 1089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 4812881 4813376 4813265 Y SEMA6B,TICAM1 FEM1A,TICAM1 NA NA NA NA TICAM1 16340 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 4912030 4912419 4912247 Y NA PLIN3,UHRF1 NA NA NA NA UHRF1 10938 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 4970760 4971027 4970931 Y NA KDM4B NA NA NA NA KDM4B 3635 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 6023211 6023679 6023440 Y RFX2 RANBP3 NA NA NA NA RANBP3 47058 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 6056849 6057757 6057360 Y DENND1C,SAFB2,SAFB,VMAC,RFX2 NA NA NA NA NA RANBP3 80696 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 6092440 6092966 6092758 Y RFX2 NA NA NA NA NA RFX2 104617 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 6108978 6109271 6109224 Y NA NA NA NA NA NA RFX2 88312 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 6516969 6517178 6517079 Y NA TUBB4A,TNFSF9 TNFSF9 K562 ChIA-PET 22265404 TNFSF9 11832 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 6539979 6540238 6540076 Y NA TUBB4A,TNFSF9 NA NA NA NA TNFSF9 10969 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 6579838 6580006 6579922 Y NA CD70 NA NA NA NA CD70 22108 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 6766042 6766297 6766158 Y NA C3,GPR108,TRIP10,SH2D3A NA NA NA NA SH2D3A 443 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 7907381 7907869 7907475 Y PNPLA6,PNPLA6,KIAA1543,FBN3,LASS4,EVI5L,FLJ22184,CTXN1 EVI5L,LRRC8E NA NA NA NA EVI5L 14262 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 8051436 8051456 8051449 Y NA TIMM44,ELAVL1 NA NA NA NA ELAVL1 17087 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 9095662 9095964 9095813 Y NA MUC16 NA NA NA NA MUC16 5644 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 9420483 9420931 9420837 Y NA ZNF559 NA NA NA NA ZNF559 11517 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 9684452 9684634 9684543 Y NA ZNF426,ZNF121,ZNF561 NA NA NA NA ZNF121 8575 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 10442358 10442615 10442487 Y NA ICAM5,FDX1L,RAVER1,ICAM3,TYK2 NA NA NA NA RAVER1 42 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 10562469 10562629 10562543 Y NA KEAP1 NA NA NA NA KEAP1 49788 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 10949257 10949551 10949405 Y CDC37,KEAP1,KRI1,ILF3,QTRT1,DNM2,SPC24,SMARCA4,SMARCA4 TMED1,CARM1 NA NA NA NA TMED1 4263 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 11044199 11044446 11044323 Y NA YIPF2,C19orf52,SMARCA4 NA NA NA NA C19orf52 6790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 11202212 11202837 11202668 Y ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR LDLR NA NA NA NA LDLR 4174 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 11205696 11206011 11205901 Y ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR LDLR NA NA NA NA LDLR 7658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 11253262 11253482 11253341 Y TMED1,CARM1,YIPF2,DOCK6 SPC24 NA NA NA NA SPC24 11002 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 11253991 11254271 11254206 Y PRKCSH,ECSIT,TMED1,CARM1,YIPF2,DOCK6 SPC24 NA NA NA NA SPC24 10213 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 11804467 11804940 11804795 Y ZNF878,ZNF823,ZNF491 HNRNPA1P10,ZNF823 NA NA NA NA HNRNPA1P10 28622 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 12888910 12889352 12889266 Y NA C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 10958 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr19 12889371 12889726 12889619 Y NA C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 10584 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 12894545 12895330 12894818 Y ZNF44,ZNF791,MAN2B1,C19orf43,DNASE2,JUNB ASNA1,JUNB,PRDX2,RNASEH2A,MAST1 NA NA NA NA JUNB 4980 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 12895349 12896178 12895559 Y ZNF563,JUNB ASNA1,JUNB,PRDX2,RNASEH2A,MAST1 NA NA NA NA JUNB 4132 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 12899457 12901460 12900777 Y NA PRDX2,RNASEH2A,MAST1 NA NA NA NA JUNB 0 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 12901644 12901726 12901699 Y NA JUNB,PRDX2,RNASEH2A,MAST1 NA NA NA NA JUNB 1334 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 13006078 13006409 13006086 Y NA HOOK2,DNASE2,GCDH,SYCE2,FARSA,CALR,RAD23A NA NA NA NA GCDH 6238 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 13147424 13147812 13147700 Y WDR83,FBXW9,TNPO2,TNPO2 NFIX NA NA NA NA NFIX 43002 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 13262107 13262928 13262695 Y MAN2B1,C19orf43,JUNB TRMT1,NACC1,STX10,IER2 NA NA NA NA IER2 2878 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr19 13907523 13907866 13907763 Y NA MRI1,C19orf53,ZSWIM4 NA NA NA NA ZSWIM4 3249 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 13954357 13954714 13954441 Y NA NA NA NA NA NA ZSWIM4 50083 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 13955108 13955589 13955298 Y CCDC130,RFX1,DCAF15,ZSWIM4 NA NA NA NA NA ZSWIM4 50834 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 13957204 13959386 13957586 Y NA NA NA NA NA NA ZSWIM4 52930 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 14172809 14173223 14173004 Y NA IL27RA,EEF1DP1,SAMD1 NA NA NA NA EEF1DP1 5931 CAGE HCC1806 hg19 FANTOM5 2.58991136108099 chr19 14466734 14466953 14466791 Y ZNF333,EMR2,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,DDX39A,CD97 CD97 LPHN1,ASF1B,LOC100507373,DDX39A,CD97 IMR90 Hi-C 24141950 CD97 22360 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 14528800 14529217 14529142 Y ZNF333,EMR2,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,CD97,DDX39A CD97,DDX39A,PKN1 NA NA NA NA DDX39A 608 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 14616908 14617174 14617017 Y GIPC1 GIPC1,TECR,DNAJB1 GIPC1 MCF7 ChIA-PET 22265404 TECR 8723 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 14636614 14636887 14636775 Y OR7C2 GIPC1,TECR,DNAJB1,NDUFB7 NA NA NA NA DNAJB1 1695 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 14661096 14661426 14661346 Y NA TECR,DNAJB1,NDUFB7 NA NA NA NA NDUFB7 19448 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 14670632 14670897 14670765 Y NA TECR,DNAJB1,NDUFB7 NA NA NA NA NDUFB7 9977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 14869692 14869911 14869839 Y NA EMR2,AC005255.3 NA NA NA NA EMR2 17442 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 15283162 15283418 15283290 Y NA ILVBL,NOTCH3 NA NA NA NA NOTCH3 26374 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 15333627 15333747 15333631 Y SYDE1,NOTCH3 NOTCH3 NA NA NA NA NOTCH3 23835 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 15334094 15334476 15334286 Y SLC1A6,WIZ NOTCH3 NA NA NA NA NOTCH3 24302 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 15666666 15666804 15666739 Y NA NA NA NA NA NA WIZ 107904 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 15974006 15974442 15974280 Y NA UCA1 NA NA NA NA UCA1 36235 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr19 16181046 16181841 16181607 Y OR10H2,OR10H3,OR10H4 TPM4,RAB8A NA NA NA NA TPM4 5215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 17188668 17188879 17188834 Y HAUS8,MYO9B HAUS8,MYO9B NA NA NA NA MYO9B 4077 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 17200078 17200517 17200217 Y MED26,FAM129C,HAUS8,MYO9B HAUS8,MYO9B NA NA NA NA MYO9B 15487 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 17307223 17307519 17307336 Y MYO9B USE1,OCEL1,NR2F6 NA NA NA NA USE1 16636 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 18415031 18416060 18415513 Y JAK3,KCNN1,ARRDC2,ARRDC2,IL12RB1,SSBP4,KLHL26,ELL,C19orf60,JUND KIAA1683,JUND,MIR3188,LSM4,PGPEP1 NA NA NA NA LSM4 16024 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 18497624 18497977 18497708 Y PDE4C,GDF15 PGPEP1,GDF15,SSBP4,ISYNA1 NA NA NA NA GDF15 14083 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 18528263 18528792 18528577 Y UPF1,ARRDC2,ARRDC2,IFI30,PGPEP1,UBA52,C19orf60,LRRC25,SSBP4 GDF15,SSBP4,ISYNA1 NA NA NA NA SSBP4 589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 18631384 18632027 18631497 Y ELL ELL,FKBP8,KXD1,UBA52 NA NA NA NA ELL 447 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 18768622 18768973 18768794 Y KIAA1683 KLHL26,CRTC1 NA NA NA NA KLHL26 22847 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 19600012 19600395 19600260 Y RFXANK,MAU2,GATAD2A,PBX4,GMIP NDUFA13,TSSK6,YJEFN3,CILP2 NA NA NA NA NDUFA13 24150 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 19708713 19709032 19708957 Y ZNF506,RFXANK,MAU2,GATAD2A,ZNF14,PBX4,GMIP PBX4,LPAR2,GMIP NA NA NA NA PBX4 18693 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 20128543 20128860 20128736 Y NA ZNF682 NA NA NA NA ZNF682 19455 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 20162886 20163252 20163139 Y ZNF506,ZNF253,ZNF682,ZNF682 ZNF682,ZNF90,AC006539.2 ZNF682,LOC284440 MCF7 ChIA-PET 22265404 ZNF682 14571 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 21511296 21511520 21511376 Y NA ZNF708,ZNF738 NA NA NA NA ZNF708 1069 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 23530488 23530791 23530760 Y NA ZNF91 NA NA NA NA ZNF91 45571 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 23732304 23732710 23732386 Y NA NA NA NA NA NA ZNF675 135312 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr19 23855421 23855665 23855541 Y NA ZNF675 NA NA NA NA ZNF675 12357 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 28218670 28219232 28218933 Y NA NA NA NA NA NA UQCRFS1 1483216 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 28232492 28232748 28232631 Y NA NA NA NA NA NA UQCRFS1 1469700 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 28234447 28234748 28234598 Y NA NA NA NA NA NA UQCRFS1 1467700 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 28252106 28252716 28252616 Y NA NA NA NA NA NA UQCRFS1 1449732 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 28252920 28253113 28253061 Y NA NA NA NA NA NA UQCRFS1 1449335 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 28265126 28266155 28265940 Y NA NA NA NA NA NA UQCRFS1 1436293 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 28270762 28271411 28271062 Y NA NA NA NA NA NA UQCRFS1 1431037 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 30131352 30131538 30131383 Y NA POP4,PLEKHF1 NA NA NA NA PLEKHF1 22425 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 30157267 30157499 30157417 Y PLEKHF1,C19orf12,C19orf12 PLEKHF1,C19orf12 NA NA NA NA PLEKHF1 3304 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 30206961 30207337 30207149 Y NA C19orf12 NA NA NA NA C19orf12 2597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 30334727 30335004 30334899 Y NA CCNE1 NA NA NA NA CCNE1 33922 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 30336581 30336824 30336781 Y C19orf2,C19orf2 CCNE1 NA NA NA NA CCNE1 35776 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 32021641 32022032 32021837 Y NA NA NA NA NA NA ZNF507 812468 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 32754044 32754196 32754068 Y NA NA NA NA NA NA ZNF507 80304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 33668108 33668528 33668227 Y SLC7A10,LRP3 LRP3,SLC7A10 NA NA NA NA LRP3 1599 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 33841444 33841736 33841590 Y NA CEBPA,CEBPG CEBPA,CEBPG,WDR88,LRP3,SLC7A10,LOC80054,PEPD,CHST8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CEBPG 20500 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 33996867 33997517 33996997 Y LRP3 PEPD NA NA NA NA PEPD 13183 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 34396925 34397389 34397012 Y NA NA KCTD15 MCF7 ChIA-PET 22265404 KCTD15 112087 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 34625713 34625998 34625854 Y PDCD2L LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 35411 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 34724001 34724111 34724046 Y NA KIAA0355 NA NA NA NA KIAA0355 19331 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 34850085 34850642 34850351 Y ZNF599,ZNF302,ZNF181 GPI,PDCD2L NA NA NA NA GPI 1700 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 35600610 35600880 35600779 Y MAG,ZNF302,ZNF181,ZNF30,SCN1B,HPN,LGI4,FXYD7,FXYD1 FXYD3,FXYD7,FXYD5 LOC100128675 K562 ChIA-PET 22265404 FXYD3 3852 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 35605566 35605978 35605759 Y MAG,FFAR1,LGI4 FXYD3,FXYD7,FXYD5 NA NA NA NA FXYD3 834 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 35643836 35643967 35643905 Y FFAR3,USF2,MAG,HPN,LGI4 FXYD3,FXYD7,FXYD5 NA NA NA NA FXYD5 203 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 35809679 35810380 35810036 Y GRAMD1A,FXYD5,FXYD5,FXYD5,USF2,FFAR2,U2AF1L4,IGFLR1,FFAR3 NA NA NA NA NA USF2 51798 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 36376938 36377077 36377046 Y NA APLP1,NFKBID,LRFN3 NA NA NA NA NFKBID 14128 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 37246589 37246720 37246657 Y NA ZNF850 NA NA NA NA ZNF850 15007 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 37795242 37795359 37795301 Y ZNF790,ZNF345,ZNF345,ZNF345,ZNF829,ZNF568,ZNF420,ZNF585B,ZNF793,ZNF781,ZNF607,ZNF607,ZNF573,ZNF570,ZNF569,ZNF540,ZNF527,HKR1 HKR1 NA NA NA NA HKR1 6380 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 38575229 38575296 38575264 Y NA NA NA NA NA NA DPF1 143058 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 39148533 39148920 39148613 Y C19orf33,FAM98C,PAPL,ACTN4 EIF3K,ACTN4 NA NA NA NA ACTN4 12244 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 39149253 39149575 39149354 Y SPINT2,C19orf33,PAK4,ACTN4 EIF3K,ACTN4 NA NA NA NA ACTN4 12964 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 39150238 39150530 39150365 Y NA EIF3K,ACTN4 NA NA NA NA ACTN4 13949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 39175000 39175365 39175141 Y NFKBIB,HNRNPL,EIF3K ACTN4 NA NA NA NA ACTN4 38711 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 39177340 39177518 39177421 Y RASGRP4,NFKBIB,HNRNPL ACTN4 NA NA NA NA ACTN4 41051 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 39179503 39179787 39179628 Y RASGRP4,NFKBIB,HNRNPL ACTN4 NA NA NA NA ACTN4 43214 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 39411140 39411539 39411467 Y LGALS7 RINL,NFKBIB,SIRT2,MRPS12,SARS2 NA NA NA NA MRPS12 7649 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 39564346 39564568 39564426 Y ZFP36,HNRNPL,NFKBIB FBXO27,PAPL,PAK4 PAPL,SAMD4B,GMFG,LRFN1 IMR90 Hi-C 24141950 PAPL 7985 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 39894353 39894945 39894613 Y GMFG,SAMD4B,PAF1,MED29,ZFP36,SUPT5H,SUPT5H,PLEKHG2 PAF1,MED29,ZFP36,PLEKHG2,RPS16,SUPT5H NA NA NA NA ZFP36 508 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 39921308 39921946 39921495 Y GMFG,SAMD4B,PAF1,MED29,ZFP36,PLEKHG2 PAF1,MED29,ZFP36,PLEKHG2,RPS16,SUPT5H,TIMM50 NA NA NA NA RPS16 2642 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 41152132 41152466 41152220 Y NA NUMBL NA NA NA NA NUMBL 42411 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 41304071 41304255 41304136 Y SERTAD1,SERTAD3,SHKBP1,ADCK4,ADCK4,RAB4B,HNRNPUL1 SNRPA,C19orf54,MIA,RAB4B,EGLN2 NA NA NA NA EGLN2 1170 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 41701582 41701929 41701850 Y CYP2A13,CYP2F1 CYP2S1,AXL NA NA NA NA CYP2S1 4628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 41702138 41702290 41702230 Y ADCK4,ITPKC,TGFB1,CCDC97 CYP2S1,AXL NA NA NA NA CYP2S1 5184 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 41814398 41814719 41814610 Y HNRNPUL1,TMEM91,TGFB1,CCDC97,B9D2 HNRNPUL1,CCDC97,TMEM91,TGFB1 NA NA NA NA CCDC97 304 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 41819266 41819494 41819482 Y NA CCDC97,TMEM91,TGFB1,B9D2 NA NA NA NA CCDC97 5172 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 42028325 42028365 42028354 Y NA NA CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21 IMR90 Hi-C 24141950 ATP5SL 83703 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 42722677 42722859 42722787 Y NA DEDD2,ZNF526,GSK3A,ERF NA NA NA NA ZNF526 254 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 42772295 42772768 42772477 Y NA ZNF526,GSK3A,ERF,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 14986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 42774379 42774759 42774668 Y CEACAM8,CEACAM3,ARHGEF1,ZNF574,POU2F2,DEDD2,ERF,CIC GSK3A,ERF,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 17070 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 42775992 42776735 42776352 Y NA GSK3A,ERF,PAFAH1B3 NA NA NA NA ERF 18683 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 43835548 43835842 43835742 Y NA NA TEX101 IMR90 Hi-C 24141950 PSG9 63866 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 44179506 44179853 44179716 Y TEX101,IRGQ,ZNF222,PLAUR,KCNN4,C19orf61 CADM4,PLAUR PLAUR MCF7 ChIA-PET 22265404 PLAUR 6807 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 44287065 44287299 44287223 Y NA SMG9,KCNN4,LYPD5,ZNF283 NA NA NA NA KCNN4 3656 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 44616064 44616441 44616271 Y KCNN4,ZNF283,ZNF404,ZNF45,ZNF221,ZNF222,ZNF233,ZNF233,ZNF229,ZNF284 ZNF284,ZNF224,ZNF225,ZNF234 NA NA NA NA ZNF225 1730 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 44821121 44821451 44821434 Y ZNF221,ZNF223,ZNF284,ZNF285,ZNF180,ZFP112,ZNF227 ZNF235 NA NA NA NA ZNF235 13922 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 45205949 45206135 45206066 Y NA BCL3 NA NA NA NA BCL3 42827 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 45256546 45257099 45256742 Y ZNF296,RELB,CLASRP,BLOC1S3,BCL3 BCL3,CBLC NA NA NA NA BCL3 7584 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 45279679 45279961 45279836 Y CEACAM19,CBLC,BCAM BCL3,CBLC,BCAM NA NA NA NA CBLC 553 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 45350775 45351289 45350997 Y BCL3,PVRL2,RELB BCAM,PVRL2,TOMM40 NA NA NA NA PVRL2 3343 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr19 45663964 45664347 45664315 Y NA TRAPPC6A,BLOC1S3 NA NA NA NA TRAPPC6A 15148 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 45755637 45756189 45755812 Y RELB,CLASRP,VASP NA NA NA NA NA BLOC1S3 75634 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 45844650 45844836 45844820 Y FBXO46,PPP1R13L KLC3,ERCC2 NA NA NA NA KLC3 9958 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 45905744 45905944 45905844 Y EML2,KLC3,PPP1R13L,ERCC1,ERCC1 ERCC2,CD3EAP,PPP1R13L NA NA NA NA CD3EAP 1523 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 45944272 45944469 45944370 Y NA CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N ERCC1,PPM1N,RTN2,VASP,FOSB,CD3EAP,PPP1R13L K562,MCF7 ChIA-PET 22265404 FOSB 24784 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 45946690 45947113 45946759 Y GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2 K562,MCF7 ChIA-PET 22265404 FOSB 22140 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 45952039 45952594 45952534 Y GIPR,RELB,CLASRP,PPM1N,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 16659 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 45953262 45953678 45953446 Y GIPR,RELB,CLASRP,BLOC1S3,PPM1N,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 15575 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 45953764 45954783 45954182 Y NA CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 14470 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr19 45959420 45959846 45959631 Y GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB FOSB,ERCC1,PPM1N,VASP FOSB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOSB 9407 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 46011701 46012269 46011904 Y FBXO46,CLASRP,ZNF296,VASP FOSB,ERCC1,PPM1N,VASP NA NA NA NA VASP 3864 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 46133845 46134220 46134022 Y NANOS2,IGFL4,NKPD1,EXOC3L2 OPA3,EML2,GIPR NA NA NA NA EML2 12667 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 46361761 46362096 46361929 Y NA SYMPK,FOXA3,IRF2BP1,MYPOP NA NA NA NA SYMPK 2452 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 46683956 46684315 46684191 Y NA IGFL1 NA NA NA NA IGFL1 46694 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr19 46688176 46688573 46688180 Y PTGIR IGFL1 NA NA NA NA IGFL1 42436 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 46708652 46708841 46708747 Y NA IGFL1 NA NA NA NA IGFL1 22168 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 46877153 46877367 46877269 Y NA PPP5C,CCDC8 NA NA NA NA PPP5C 28902 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 46907328 46907649 46907570 Y NA CCDC8 NA NA NA NA CCDC8 7192 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 46930027 46930174 46930086 Y NA CCDC8 CCDC8,LOC100506012 IMR90 Hi-C 24141950 CCDC8 15186 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 47363167 47364689 47363471 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562 ChIA-PET 22265404 AP2S1 10918 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 47448240 47448462 47448420 Y PNMAL1,PNMAL2,DACT3,ARHGAP35,MEIS3,NPAS1 NA NA NA NA NA NPAS1 72615 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 47599577 47599849 47599731 Y NA TMEM160,SAE1,ZC3H4 NA NA NA NA SAE1 14682 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 47662714 47662828 47662771 Y NA SAE1,ZC3H4 NA NA NA NA ZC3H4 47705 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 47776748 47776969 47776841 Y GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1 BBC3,CCDC9,PRR24 NA NA NA NA PRR24 606 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 47792934 47793257 47793053 Y NA CCDC9,PRR24 NA NA NA NA PRR24 16792 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr19 47814150 47814595 47814332 Y ZC3H4,NAPA,DHX34,CCDC9,C5AR1,GPR77 PRR24,DHX34 NA NA NA NA DHX34 35943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 47854917 47855115 47854986 Y ZC3H4,BBC3,CCDC9,C5AR1,GPR77,NAPA,DHX34 DHX34 NA NA NA NA DHX34 4379 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 47950200 47950556 47950503 Y SLC8A2 MEIS3,KPTN NA NA NA NA MEIS3 29420 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 48016569 48017036 48016994 Y GLTSCR2,ZC3H4,CCDC9,C5AR1,GPR77,DHX34,GLTSCR1,NAPA KPTN,NAPA NA NA NA NA NAPA 72 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 48103581 48103982 48103689 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 NA GLTSCR1,NAPA MCF7 ChIA-PET 22265404 NAPA 87084 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 48166987 48167048 48167018 Y NA EHD2 NA NA NA NA EHD2 47552 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 48222362 48222481 48222377 Y SEPW1,PLA2G4C,MEIS3,SLC8A2 EHD2,GLTSCR2 NA NA NA NA EHD2 7762 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 48903013 48903207 48903134 Y PPP1R15A,EMP3,FUT1,IZUMO1 TMEM143,SYNGR4,KDELR1,GRWD1 NA NA NA NA KDELR1 10203 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr19 49092091 49092636 49092297 Y BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11 SULT2B1,SPHK2,RPL18,DBP NA NA NA NA SPHK2 27912 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 49386525 49386775 49386581 Y CD37,PPP1R15A PLEKHA4,PPP1R15A,NUCB1,DHDH NA NA NA NA PPP1R15A 12876 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 49924099 49924476 49924276 Y TBC1D17,RRAS,RCN3,PRR12,NOSIP,AP2A1 SLC17A7,ALDH16A1,PIH1D1 NA NA NA NA SLC17A7 19141 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 50860908 50861268 50861186 Y PNKP,VRK3,NR1H2 NR1H2,KCNC3,POLD1 NA NA NA NA POLD1 24193 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 50872495 50872846 50872654 Y NA NR1H2,KCNC3,POLD1 NA NA NA NA POLD1 12615 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 50993680 50994951 50994565 Y NA FAM71E1,JOSD2 NA NA NA NA FAM71E1 15670 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 51010284 51010518 51010437 Y KLK4,ACPT,SYT3,SHANK1,LOC342918 FAM71E1,JOSD2 NA NA NA NA JOSD2 2092 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 51287900 51288107 51288100 Y NA C19orf48 NA NA NA NA C19orf48 18079 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 52192085 52192767 52192400 Y ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577 NA NA NA NA NA ZNF175 119534 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 52194594 52195259 52195000 Y ZNF615,ZNF350,C19orf75,IGLON5,CLDND2,SIGLEC10,FPR2,FPR2,FPR1 NA NA NA NA NA ZNF175 122043 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 52229316 52229816 52229631 Y HAS1 NA NA NA NA NA ZNF175 156765 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 52239330 52239749 52239573 Y ZNF350,SIGLEC10,SIGLEC14,FPR2,FPR2,FPR1 NA NA NA NA NA ZNF577 152454 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 52674093 52674226 52674127 Y ZNF836 ZNF616,RPL37P23,ZNF836,PPP2R1A NA NA NA NA ZNF836 1197 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 52697339 52697517 52697506 Y ZNF350,ZNF432,ZNF836,ZNF83,ZNF808,ZNF766 ZNF836,PPP2R1A NA NA NA NA PPP2R1A 6047 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 53145294 53145545 53145446 Y NA ZNF83 NA NA NA NA ZNF83 46204 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 53150651 53150972 53150733 Y NA ZNF83 ZNF137P IMR90 Hi-C 24141950 ZNF83 40777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 53426305 53426488 53426354 Y ZNF765,ZNF468,ZNF816 ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816 NA NA NA NA ZNF816-ZNF321P 17366 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 53444729 53445104 53444918 Y ZNF765,ZNF761,ZNF665,ZNF347,ZNF347,ZNF160,ZNF808,ZNF701,ZNF701,ZNF83,ZNF816 ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816 NA NA NA NA ZNF816-ZNF321P 875 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 53727403 53727861 53727738 Y NA ZNF665 NA NA NA NA ZNF665 32764 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr19 54291187 54291209 54291198 Y BIRC8,ZNF845,ZNF765,ZNF761,ZNF813 AC008753.3 NA NA NA NA AC008753.3 14334 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 54714720 54715094 54714879 Y NLRP12,NLRP12,MYADM,MYADM,MYADM,VSTM1,OSCAR,LILRB4,LILRB1,LILRB1,LILRB1,LILRA5,LILRA3,LILRA3,LILRA2,LILRA1,LENG8,LAIR1,MBOAT7,TSEN34,LILRB3,LILRB2,LILRA6 TMC4,MBOAT7,TSEN34,RPS9 NA NA NA NA RPS9 12110 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 54981954 54982383 54982298 Y NA LENG8,LENG8-AS1,LENG9,CDC42EP5 NA NA NA NA CDC42EP5 28 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 55540419 55540558 55540460 Y SHISA7,KIR2DL3,NCR1 RDH13,EPS8L1 NA NA NA NA RDH13 40101 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 55850120 55850505 55850225 Y KIR3DL2,NCR1,PPP1R12C,PPP6R1,ZNF865,ZNF784,ZNF628,EPN1,SUV420H2,LOC388564 SUV420H2,COX6B2,TMEM238,RPL28 NA NA NA NA SUV420H2 899 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr19 56061327 56061704 56061673 Y NA ZNF579,ZNF524,FIZ1 SGK110 K562 ChIA-PET 22265404 ZNF579 28507 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 56116208 56117068 56116734 Y NA ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,U2AF2 NA NA NA NA FIZ1 4872 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr19 56796830 56796936 56796883 Y NA NA NA NA NA NA ZNF542 80532 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 56823857 56823998 56823922 Y ZSCAN5A NA NA NA NA NA ZNF542 53470 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 56833034 56833496 56833435 Y ZSCAN5A ZNF542,ZSCAN5A NA NA NA NA ZNF542 43972 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 57965552 57965851 57965609 Y NA ZNF17,ZNF749,ZNF772,ZNF419,ZNF773 NA NA NA NA ZNF749 20855 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58162762 58163096 58162801 Y NA ZNF134,ZNF211,ZNF551 NA NA NA NA ZNF211 23001 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58237757 58238155 58237774 Y NA ZNF551,ZNF776,ZNF586 ZNF154 IMR90 Hi-C 24141950 ZNF776 18009 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr19 58315114 58315751 58315446 Y ZNF543,ZNF549,ZNF418,ZNF135,ZNF154,ZNF552 ZNF586,ZNF552,ZNF587 NA NA NA NA ZNF552 8530 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58317986 58318160 58318072 Y NA ZNF586,ZNF552,ZNF587 NA NA NA NA ZNF552 6121 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58413801 58413982 58413868 Y ZNF154,ZNF418 ZNF417,ZNF418,ZNF256 NA NA NA NA ZNF417 11996 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58532436 58532530 58532517 Y NA CTD-2368P22.1,ZNF606,ZNF135 NA NA NA NA ZNF606 19719 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58556424 58556556 58556505 Y LOC100293516,ZSCAN18,ZNF329,C19orf18,ZSCAN1 CTD-2368P22.1,ZNF606,ZNF135 NA NA NA NA ZNF135 12051 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58781089 58781297 58781193 Y NA ZNF544,ZNF8,ERVK3-1 ZNF8 IMR90 Hi-C 24141950 ZNF8 7021 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr19 58784706 58785064 58784920 Y NA ZNF544,ZNF8,ERVK3-1 NA NA NA NA ZNF8 3254 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58788473 58788748 58788728 Y NA ZNF8,ERVK3-1,ZSCAN22 NA NA NA NA ZNF8 155 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr19 58912594 58912944 58912773 Y ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324 A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF132,ZNF324B NA NA NA NA ZNF584 1723 CAGE HCC1806 hg19 FANTOM5 4.47348326004898 chr19 59087419 59087864 59087514 Y NA ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1,MGC2752 NA NA NA NA MGC2752 3527 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 628526 628919 628630 Y NA TMEM18 FAM150B IMR90 Hi-C 24141950 TMEM18 46520 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 1725652 1725860 1725698 Y NA PXDN NA NA NA NA PXDN 20764 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 2617084 2617480 2617333 Y NA NA NA NA NA NA TSSC1 762173 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 3340825 3341028 3341010 Y NA TSSC1,TRAPPC12 NA NA NA NA TSSC1 38625 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 3487019 3487372 3487201 Y NA ADI1 NA NA NA NA ADI1 34135 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 8557340 8557745 8557525 Y KIDINS220 NA LOC100506274,LINC00299,LOC339788,ID2 IMR90 Hi-C 24141950 AC011747.4 164177 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 9641378 9641587 9641543 Y NA IAH1 NA NA NA NA IAH1 29591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 9678248 9678641 9678477 Y ADAM17 ADAM17 NA NA NA NA ADAM17 15280 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 9893339 9893657 9893442 Y ADAM17,KLF11,KLF11 NA YWHAQ,ADAM17,ITGB1BP1,IAH1,RRM2,CPSF3,GRHL1 IMR90 Hi-C 24141950 TAF1B 87826 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 9894353 9894610 9894569 Y ADAM17,KLF11,KLF11,GRHL1 NA YWHAQ,ADAM17,ITGB1BP1,IAH1,RRM2,CPSF3,GRHL1,KLF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 86873 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr2 9922366 9922715 9922451 Y NA NA YWHAQ,KLF11,CYS1,ADAM17,GRHL1,RRM2,TAF1B IMR90 Hi-C 24141950 TAF1B 58768 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr2 9941222 9941554 9941329 Y ADAM17,KLF11,KLF11 TAF1B YWHAQ,KLF11,CYS1,ADAM17,ODC1,RRM2,GRHL1,TAF1B,HPCAL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 39929 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 10075100 10075410 10075131 Y TAF1B GRHL1 GRHL1 IMR90 Hi-C 24141950 GRHL1 7931 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 10261505 10261712 10261609 Y NA CYS1,RRM2 NA NA NA NA RRM2 1050 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 10330449 10330626 10330557 Y NA NA NA NA NA NA RRM2 69994 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 10550434 10550795 10550555 Y HPCAL1,HPCAL1 ODC1,RP11-320M2.1 ODC1 IMR90 Hi-C 24141950 ODC1 35835 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 11270081 11270242 11270156 Y KCNF1,C2orf50 PQLC3 NA NA NA NA PQLC3 23082 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 11352501 11352895 11352887 Y NA NA NA NA NA NA PQLC3 59177 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 11514785 11514933 11514926 Y NA ROCK2 ROCK2,E2F6,PQLC3,PDIA6,C2orf50 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ROCK2 28329 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 11884050 11884543 11884432 Y NA NA NA NA NA NA LPIN1 68329 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 12633247 12633315 12633291 Y NA NA TRIB2,LPIN1 IMR90 Hi-C 24141950 TRIB2 221700 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 15397207 15397542 15397373 Y DDX1,NBAS NA NA NA NA NA NBAS 301912 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 15594564 15594826 15594695 Y DDX1,NBAS NA NA NA NA NA NBAS 104628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20386283 20386578 20386422 Y TTC32,HS1BP3 SDC1 NA NA NA NA SDC1 36616 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20412281 20412403 20412381 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 10791 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20417309 20417694 20417511 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 5500 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20431248 20431615 20431535 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 8054 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 20432677 20432919 20432791 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 9483 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20544740 20544866 20544805 Y NA PUM2 PUM2,HS1BP3 IMR90 Hi-C 24141950 PUM2 5129 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20548410 20548604 20548507 Y NA PUM2 HS1BP3,PUM2 IMR90 Hi-C 24141950 PUM2 1391 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 20624612 20624982 20624777 Y HS1BP3 RHOB HS1BP3,RHOB,PUM2 IMR90 Hi-C 24141950 RHOB 19853 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 24495048 24495317 24495183 Y NA NA NA NA NA NA RPL36AP13 60064 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 25021346 25021618 25021482 Y NA CENPO,PTRHD1 NA NA NA NA PTRHD1 7095 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 25701614 25701880 25701747 Y NA NA NA NA NA NA DNMT3A 138155 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 26220678 26220902 26220866 Y RAB10 KIF3C,RAB10 ASXL2,RAB10,FAM59B,KIF3C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIF3C 17060 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 26258152 26258567 26258448 Y RAB10 RAB10 NA NA NA NA RAB10 3176 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 26328559 26328812 26328686 Y FAM59B,RAB10 NA NA NA NA NA RAB10 73583 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 26521727 26522029 26521734 Y NA EPT1 NA NA NA NA EPT1 7386 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 26522632 26522929 26522714 Y NA EPT1 NA NA NA NA EPT1 6486 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 27304052 27304486 27304234 Y CENPA,CENPA,DPYSL5,SLC5A6,PPM1G,GTF3C2,CAD,CGREF1 AGBL5,OST4,KHK,CGREF1,ABHD1 NA NA NA NA KHK 3129 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 27557346 27557529 27557503 Y DPYSL5,C2orf16 MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513 NA NA NA NA MPV17 10799 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 27574731 27574755 27574743 Y NA MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513,FTH1P3 NA NA NA NA AC074117.10 2358 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 27614467 27614499 27614483 Y EIF2B4,EIF2B4 AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513,FTH1P3,PPM1G,NRBP1 NA NA NA NA FTH1P3 233 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 27629706 27629770 27629738 Y NA EIF2B4,SNX17,ZNF513,FTH1P3,PPM1G,NRBP1 NA NA NA NA PPM1G 784 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 27878874 27879165 27879028 Y SLC5A6,GTF3C2,NRBP1,IFT172,BRE,BRE,ZNF512,GPN1,CCDC121,GPN1,CCDC121,SUPT7L,SLC4A1AP GPN1,CCDC121,SLC4A1AP,SUPT7L NA NA NA NA SLC4A1AP 5173 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 27958320 27958698 27958604 Y NA MRPL33 BRE,PLB1,RBKS,MRPL33,FOSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL33 33886 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr2 28600937 28601380 28601351 Y RBKS,BRE,BRE,PPP1CB,PPP1CB,FOSL2 FOSL2,AC104695.3 RBKS,BRE,GPN1,CCDC121,SLC4A1AP,MRPL33,LOC100505716,FOSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOSL2 11935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 28659517 28659673 28659646 Y NA FOSL2,AC104695.3 FOSL2 MCF7 ChIA-PET 22265404 AC104695.3 43978 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 28767576 28768254 28768064 Y WDR43,TRMT61B,SPDYA NA NA NA NA NA AC104695.3 152037 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 28833397 28833696 28833546 Y NA NA NA NA NA NA PPP1CB 138810 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 28844259 28844848 28844625 Y FOSL2,TRMT61B,PPP1CB,PPP1CB NA NA NA NA NA PPP1CB 127658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 28856660 28856889 28856764 Y NA NA NA NA NA NA PPP1CB 115617 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 28991945 28992473 28991994 Y NA PPP1CB SPDYA IMR90 Hi-C 24141950 PPP1CB 19439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 29173330 29173730 29173529 Y PPP1CB,PPP1CB,TRMT61B,WDR43 NA NA NA NA NA WDR43 57821 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 29331222 29331429 29331307 Y NA CLIP4 CLIP4 MCF7 ChIA-PET 22265404 CLIP4 12651 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 29339148 29339698 29339489 Y NA CLIP4 NA NA NA NA CLIP4 20577 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 29349196 29349466 29349333 Y NA CLIP4 NA NA NA NA CLIP4 30625 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 30414681 30414956 30414777 Y NA YPEL5,LBH LCLAT1,LBH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LBH 37441 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 30440662 30440911 30440739 Y NA LBH,AC104698.1 LBH,LCLAT1 IMR90 Hi-C 24141950 LBH 11486 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 33702756 33702976 33702846 Y RASGRP3,RASGRP3 NA NA NA NA NA FAM98A 119473 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 36688353 36688868 36688635 Y NA NA NA NA NA NA CRIM1 107284 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 36761840 36762400 36762263 Y NA NA NA NA NA NA FEZ2 108830 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 36790527 36791707 36791646 Y NA NA NA NA NA NA FEZ2 79523 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 36791809 36792197 36792002 Y CRIM1 NA NA NA NA NA FEZ2 79033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37139828 37140219 37140054 Y NA NA NA NA NA NA STRN 51396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37199283 37199286 37199285 Y NA STRN NA NA NA NA STRN 7668 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37308622 37308977 37308800 Y NA HEATR5B NA NA NA NA HEATR5B 508 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37383262 37383336 37383288 Y NA EIF2AK2,AC007390.4 NA NA NA NA EIF2AK2 1054 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37489254 37489354 37489306 Y NA CEBPZ NA NA NA NA CEBPZ 32398 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37603882 37604154 37604086 Y QPCT QPCT NA NA NA NA QPCT 34165 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37617673 37618124 37617783 Y CDC42EP3,EIF2AK2 QPCT NA NA NA NA QPCT 47956 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37815586 37815764 37815605 Y EIF2AK2,CYP1B1,CDC42EP3 NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 147847 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37827811 37828357 37828118 Y EIF2AK2,EIF2AK2,QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 135254 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37879485 37879782 37879514 Y EIF2AK2,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 83829 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 37880894 37881162 37881056 Y EIF2AK2,QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 82449 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 38243408 38243779 38243596 Y CDC42EP3 NA NA NA NA NA CYP1B1 91265 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 38323202 38323810 38323564 Y CDC42EP3,CYP1B1 CYP1B1 CYP1B1,FAM82A1,CYP1B1-AS1,HNRPLL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CYP1B1 11234 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 38373682 38374230 38374188 Y CDC42EP3,CYP1B1 CYP1B1 NA NA NA NA CYP1B1 38638 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr2 38417790 38418062 38417924 Y CYP1B1 AC009229.5 NA NA NA NA AC009229.5 46670 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 38418747 38419129 38419037 Y NA AC009229.5 NA NA NA NA AC009229.5 45603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 38472288 38472516 38472419 Y FAM82A1 AC009229.5 FAM82A1,CYP1B1-AS1,CYP1B1 IMR90 Hi-C 24141950 AC009229.5 7556 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 38538303 38538646 38538475 Y NA NA NA NA NA NA ATL2 63781 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 39079289 39079498 39079407 Y SRSF7,ARHGEF33 DHX57,MORN2 NA NA NA NA DHX57 21577 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 39334876 39335293 39335230 Y NA SOS1 NA NA NA NA SOS1 14193 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 39919692 39919788 39919740 Y TMEM178,TMEM178 NA NA NA NA NA THUMPD2 84619 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 42412542 42412681 42412587 Y NA EML4 NA NA NA NA EML4 18052 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 42535809 42536204 42535901 Y NA NA COX7A2L IMR90 Hi-C 24141950 COX7A2L 114024 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 43020336 43020977 43020619 Y HAAO HAAO NA NA NA NA HAAO 2603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 43653578 43653957 43653847 Y NA NA LOC100129726,ZFP36L2 MCF7 ChIA-PET 22265404 THADA 167228 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 43686078 43686091 43686085 Y NA NA NA NA NA NA THADA 135094 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 43705862 43706134 43705998 Y NA NA NA NA NA NA THADA 115051 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 43908548 43908922 43908739 Y PLEKHH2 PLEKHH2 NA NA NA NA PLEKHH2 46136 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 44849210 44849529 44849370 Y NA NA NA NA NA NA CAMKMT 262121 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 45164818 45165169 45165126 Y NA RP11-89K21.1,SIX3-AS1 NA NA NA NA RP11-89K21.1 480 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 46409270 46409537 46409436 Y EPAS1 NA NA NA NA NA EPAS1 109269 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 46542401 46542637 46542520 Y NA EPAS1 NA NA NA NA EPAS1 23595 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 46857387 46857788 46857588 Y NA CRIPT,PIGF NA NA NA NA PIGF 15129 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 47197841 47198107 47197954 Y RHOQ,TTC7A,MCFD2 MCFD2 NA NA NA NA MCFD2 30847 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 47306951 47307378 47307182 Y NA NA NA NA NA NA CALM2 94362 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 47540250 47540463 47540357 Y NA AC073283.4,EPCAM CALM2,TTC7A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AC073283.4 29750 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 48709527 48709805 48709665 Y FOXN2,KLRAQ1 PPP1R21,STON1 NA NA NA NA PPP1R21 43790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 50701819 50701837 50701828 Y NRXN1 NA NA NA NA NA STON1 1947297 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 54022416 54022710 54022562 Y NA CHAC2,ERLEC1 NA NA NA NA ERLEC1 10235 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 54111882 54111915 54111897 Y NA GPR75-ASB3,ASB3 NA NA NA NA ASB3 26585 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 54787503 54787764 54787623 Y RTN4,SPTBN1 NA NA NA NA NA SPTBN1 106081 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 55212013 55212317 55212165 Y CCDC88A NA NA NA NA NA RTN4 125440 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 55249584 55250267 55249993 Y NA NA NA NA NA NA RTN4 87490 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 56083172 56083316 56083296 Y EFEMP1 NA NA NA NA NA EFEMP1 65958 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 56116145 56116275 56116210 Y NA EFEMP1 NA NA NA NA EFEMP1 32999 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 58339709 58340405 58340032 Y VRK2,VRK2,VRK2 NA NA NA NA NA FANCL 126102 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 59983827 59983888 59983858 Y NA NA NA NA NA NA RNU1-32P 625852 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 60776650 60777166 60776879 Y REL,BCL11A BCL11A NA NA NA NA BCL11A 1536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 60779041 60779656 60779263 Y REL,BCL11A BCL11A NA NA NA NA BCL11A 339 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 60962204 60962802 60962781 Y NA PAPOLG NA NA NA NA PAPOLG 18563 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 61112067 61112568 61112226 Y REL REL NA NA NA NA REL 5411 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 61428317 61428371 61428344 Y USP34,AHSA2 AHSA2 NA NA NA NA AHSA2 25764 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 61766465 61766637 61766569 Y AHSA2,USP34 XPO1 NA NA NA NA XPO1 2704 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 61921641 61922071 61921953 Y NA NA NA NA NA NA FAM161A 157207 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 61990946 61991094 61991044 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM161A 88184 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 61991278 61991660 61991557 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM161A 87618 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr2 62519354 62519381 62519368 Y NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 98106 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 63452850 63453196 63453026 Y NA NA NA NA NA NA OTX1 177658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 63842322 63842740 63842368 Y UGP2 MDH1 NA NA NA NA MDH1 28579 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr2 64175541 64175571 64175556 Y NA NA NA NA NA NA VPS54 68635 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 64245195 64245602 64245370 Y NA VPS54 NA NA NA NA VPS54 989 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 64352533 64352773 64352693 Y NA AC074289.1,PELI1 NA NA NA NA AC074289.1 15600 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 64360908 64361228 64361132 Y NA AC074289.1,PELI1 NA NA NA NA AC074289.1 7145 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 64836549 64836646 64836605 Y SLC1A4,PELI1,SERTAD2,AFTPH NA NA NA NA NA AFTPH 87084 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 64879615 64879792 64879667 Y SERTAD2 NA LOC339807 IMR90 Hi-C 24141950 SERTAD2 96347 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 64978173 64978610 64978385 Y CEP68 SERTAD2 SERTAD2,LOC339807,AFTPH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 2034 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 64994926 64995226 64995021 Y SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2 SERTAD2 SERTAD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 18787 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 65303160 65303240 65303200 Y SERTAD2,SLC1A4,ACTR2,RAB1A CEP68 NA NA NA NA CEP68 21660 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 65657861 65658229 65658008 Y SLC1A4,SPRED2,SPRED2 SPRED2 NA NA NA NA SPRED2 90 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 65804222 65804385 65804306 Y RAB1A NA ACTR2,SPRED2 IMR90 Hi-C 24141950 SPRED2 146451 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 67625110 67625487 67625291 Y ETAA1 ETAA1 NA NA NA NA ETAA1 2659 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr2 68428934 68429266 68429100 Y NA WDR92,PNO1 NA NA NA NA PNO1 45958 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 68472906 68473226 68473141 Y PPP3R1 PPP3R1 NA NA NA NA PPP3R1 8143 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 69857892 69858266 69858093 Y NA ANXA4,AAK1 NA NA NA NA ANXA4 11291 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 69997386 69997753 69997552 Y PCBP1,MXD1 NA NA NA NA NA GMCL1 57021 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 70057532 70057914 70057667 Y C2orf42,AAK1,GMCL1 GMCL1 NA NA NA NA GMCL1 2758 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 70141198 70141461 70141241 Y NA SNRNP27,MXD1,ASPRV1 NA NA NA NA MXD1 18378 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 70294861 70295138 70295000 Y NA PCBP1,PCBP1-AS1,AC016700.4 NA NA NA NA PCBP1 17447 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 70608938 70609447 70609175 Y TGFA NA NA NA NA NA FAM136A 81716 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 70667389 70667575 70667482 Y NA NA NA NA NA NA TGFA 111750 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 70847317 70847463 70847388 Y FIGLA,ADD2,ADD2 NA NA NA NA NA TGFA 67992 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 72416850 72417011 72416931 Y NA NA NA NA NA NA EXOC6B 634159 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 72426245 72426403 72426323 Y NA NA NA NA NA NA EXOC6B 624767 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 72713565 72713630 72713598 Y NA NA NA NA NA NA EXOC6B 337540 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 72732418 72732763 72732614 Y NA NA NA NA NA NA EXOC6B 318407 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 73774930 73775287 73775109 Y NA NA NA NA NA NA ALMS1 164044 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 74152201 74152400 74152268 Y NA DGUOK NA NA NA NA DGUOK 248 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 74647656 74647929 74647851 Y SLC4A5,SLC4A5,DCTN1,C2orf81 DCTN1,C2orf81,WDR54,RTKN,INO80B,WBP1,MOGS NA NA NA NA WDR54 851 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 74765672 74765911 74765792 Y WBP1,LBX2,LOXL3,DOK1 LBX2,PCGF1,DQX1,HTRA2,AUP1 NA NA NA NA AUP1 10606 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 81709176 81709459 81709306 Y NA NA NA NA NA NA AC016716.1 1320915 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 85147093 85147556 85147171 Y TMSB10 TMSB10,KCMF1 NA NA NA NA TMSB10 16344 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 85154234 85154422 85154323 Y NA TMSB10,KCMF1 NA NA NA NA TMSB10 23485 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 85173188 85173797 85173736 Y TMSB10 TMSB10,KCMF1 KCMF1,TMSB10 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KCMF1 22419 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 85242321 85242336 85242334 Y NA KCMF1 NA NA NA NA KCMF1 46105 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 85567649 85568034 85567918 Y NA TGOLN2,ELMOD3,RETSAT TGOLN2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ELMOD3 11483 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 86120990 86121249 86121122 Y NA ST3GAL5 ST3GAL5,POLR1A IMR90 Hi-C 24141950 ST3GAL5 6853 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 86121717 86122002 86121863 Y NA ST3GAL5 ST3GAL5,POLR1A IMR90 Hi-C 24141950 ST3GAL5 7580 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 86388217 86388607 86388413 Y NA IMMT,MRPL35 NA NA NA NA IMMT 32286 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 86722974 86723324 86723287 Y NA NA NA NA NA NA KDM3A 57204 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 91815672 91815808 91815787 Y NA NA NA NA NA NA RPIA 2826510 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 91821438 91821799 91821741 Y NA NA NA NA NA NA RPIA 2832276 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 91936197 91936406 91936290 Y NA NA NA NA NA NA RPIA 2947035 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 95925847 95925871 95925861 Y NA PROM2 PROM2 IMR90 Hi-C 24141950 PROM2 12330 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 97012594 97012961 97012778 Y ASTL SNRNP200,AC021188.4,ITPRIPL1,NCAPH NA NA NA NA NCAPH 13069 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 97151625 97152085 97151839 Y ASTL,DUSP2,TMEM127,KIAA1310,CNNM4,ARID5A NEURL3,ARID5A NA NA NA NA NEURL3 19761 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 97222458 97223029 97222771 Y DUSP2,TMEM127,KIAA1310,CNNM4,ARID5A ARID5A NA NA NA NA ARID5A 21978 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 98367978 98368166 98368128 Y TMEM131,ANKRD36B,ZAP70,ZAP70 NA NA NA NA NA ACTR1B 89408 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 98443211 98443622 98443475 Y NA NA NA NA NA NA ACTR1B 164641 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 98822932 98823207 98823080 Y NA NA NA NA NA NA VWA3B 121353 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 99118904 99119212 99119061 Y NA NA NA NA NA NA INPP4A 59587 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 99792031 99792038 99792035 Y NA C2orf15,LIPT1,TSGA10,MITD1,MRPL30 NA NA NA NA MITD1 3483 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 100104968 100105518 100105262 Y REV1 REV1 NA NA NA NA REV1 471 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 101680419 101680493 101680454 Y NA NA NA NA NA NA RPL31 64242 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 101712877 101712902 101712892 Y NA NA NA NA NA NA RPL31 96700 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 101944860 101945306 101945135 Y MAP4K4,MAP4K4,RNF149 RNF149 NA NA NA NA RNF149 21697 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 102133779 102134093 102133972 Y MAP4K4,MAP4K4 NA MAP4K4,RFX8,CREG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREG2 131722 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 102150811 102151152 102151053 Y RNF149,MAP4K4,MAP4K4 NA MAP4K4,RFX8,TBC1D8 IMR90 Hi-C 24141950 CREG2 148754 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 102246727 102247245 102246928 Y RNF149,MAP4K4,MAP4K4 NA RFX8,MAP4K4,CREG2 IMR90 Hi-C 24141950 MAP4K4 64067 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 102383406 102383725 102383568 Y MAP4K4,MAP4K4 NA NA NA NA NA MAP4K4 72094 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 102744535 102744807 102744707 Y IL1RL2,IL1R1,MAP4K4,MAP4K4 NA IL1RL2,IL1R2,IL1R1,IL1RL1,IL18RAP IMR90 Hi-C 24141950 IL1R1 65531 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 105973379 105973614 105973553 Y NA TGFBRAP1,C2orf49 NA NA NA NA C2orf49 21563 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 106474357 106474542 106474414 Y NA NA NA NA NA NA NCK2 115003 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 109201604 109202307 109201998 Y LIMS1,RANBP2,LIMS1,LIMS1 NA NA NA NA NA LIMS1 52747 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 110271705 110271931 110271836 Y NA NA NA NA NA NA SEPT10 97852 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 110319562 110319852 110319693 Y NA SEPT10 NA NA NA NA SEPT10 49931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 110863536 110863928 110863763 Y MALL MALL NA NA NA NA MALL 8215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 110871797 110872011 110872000 Y MALL MALL NA NA NA NA MALL 132 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 112417011 112417329 112417184 Y NA NA BCL2L11,ACOXL IMR90 Hi-C 24141950 ANAPC1 222938 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 113444240 113444400 113444290 Y NA SLC20A1,NT5DC4 NA NA NA NA NT5DC4 32663 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 113550957 113551489 113551296 Y IL36B,IL36G,IL1RN,IL1A,IL1B CKAP2L,IL1A,IL1B CKAP2L,IL37,IL1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IL1A 10790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 113552525 113552798 113552647 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B CKAP2L,IL1A,IL1B CKAP2L,IL37,IL1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IL1A 12358 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 113563232 113563409 113563324 Y IL36G,IL1RN CKAP2L,IL1A,IL1B NA NA NA NA IL1A 23065 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 113570329 113570602 113570498 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B IL1A,IL1B NA NA NA NA IL1B 21878 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 113576216 113576532 113576373 Y IL36G,PSD4,IL1RN,IL1A,IL1B IL1A,IL1B NA NA NA NA IL1B 15948 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 113637417 113638142 113637790 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B IL1B CKAP2L,IL1A,IL1B,IL37 IMR90 Hi-C 24141950 IL1B 44937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 113847761 113847860 113847813 Y IL1A,IL1B,IL37,IL36G,CBWD2,IL36B,IL1F10,IL1RN NA NA NA NA NA PAX8-AS1 119239 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 114082449 114082815 114082523 Y NA NA PAX8,LOC654433 IMR90 Hi-C 24141950 PAX8-AS1 115350 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 118984054 118984207 118984149 Y NA AC093901.1 EN1 IMR90 Hi-C 24141950 AC093901.1 42092 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 119067655 119067950 119067737 Y NA NA NA NA NA NA AC093901.1 125693 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 119660312 119660603 119660477 Y DBI NA NA NA NA NA EN1 57058 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 120971736 120972136 120971936 Y NA TMEM185B,RALB NA NA NA NA AC012363.4 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 120996274 120996566 120996498 Y NA AC012363.4,TMEM185B,RALB EPB41L5,RALB,TMEM185B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RALB 634 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 121155649 121155973 121155708 Y INHBB NA LOC84931,INHBB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INHBB 53930 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 127862609 127862665 127862637 Y NA BIN1 NA NA NA NA BIN1 266 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 127915404 127915435 127915422 Y NA NA CYP27C1,BIN1,MAP3K2 IMR90 Hi-C 24141950 BIN1 52473 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 127975624 127975823 127975720 Y NA NA NA NA NA NA CYP27C1 0 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 128090505 128090721 128090714 Y NA ERCC3 NA NA NA NA ERCC3 40753 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 128119420 128119722 128119576 Y NA MAP3K2 IWS1 IMR90 Hi-C 24141950 MAP3K2 24319 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 128598749 128599093 128599053 Y IWS1,SFT2D3,AMMECR1L WDR33,POLR2D NA NA NA NA POLR2D 14638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 128617356 128617514 128617464 Y NA POLR2D NA NA NA NA POLR2D 3625 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 129073927 129074235 129074112 Y NA NA NA NA NA NA HS6ST1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 129381655 129381863 129381711 Y NA NA UGGT1,HS6ST1 IMR90 Hi-C 24141950 HS6ST1 307504 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 130928401 130928722 130928538 Y NA MZT2B,SMPD4 NA NA NA NA MZT2B 8588 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 131148815 131149203 131148908 Y FAM123C,FAM123C,FAM123C,CCDC115,PTPN18 PTPN18 NA NA NA NA PTPN18 37235 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 131485043 131485533 131485339 Y NA NA NA NA NA NA FAM168B 363500 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 131555592 131555820 131555689 Y CCDC115 NA PLEKHB2,FAM168B K562,MCF7 ChIA-PET 22265404 FAM168B 293213 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 131586593 131586950 131586772 Y NA NA ARHGEF4 IMR90 Hi-C 24141950 FAM168B 262083 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 133407314 133407482 133407398 Y LYPD1,LYPD1 LYPD1 NA NA NA NA LYPD1 19670 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 133433715 133433886 133433800 Y NA LYPD1 NA NA NA NA LYPD1 6563 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 135701216 135701448 135701313 Y NA CCNT2,CCNT2-AS1 NA NA NA NA CCNT2-AS1 26936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 138710316 138710600 138710459 Y NA HNMT HNMT IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNMT 8990 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 139112246 139112514 139112380 Y NA NA NA NA NA NA AC097721.2 144754 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 140168949 140169074 140169000 Y NA NA NA NA NA NA SPOPL 911578 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr2 142222584 142223129 142223081 Y NA NA NA NA NA NA LRP1B 664141 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 143615896 143616223 143616082 Y KYNU KYNU KYNU MCF7 ChIA-PET 22265404 KYNU 16844 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 143624367 143624985 143624879 Y KYNU KYNU KYNU MCF7 ChIA-PET 22265404 KYNU 8082 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 143630131 143630342 143630268 Y KYNU KYNU NA NA NA NA KYNU 2725 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 143630782 143631707 143631171 Y KYNU KYNU NA NA NA NA KYNU 1360 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 143841282 143841488 143841338 Y KYNU,ARHGAP15 NA NA NA NA NA KYNU 208215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 145116388 145116823 145116635 Y NA GTDC1 ZEB2,ARHGAP15,GTDC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GTDC1 28253 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 150505364 150505670 150505432 Y NA NA RBM43,RND3 IMR90 Hi-C 24141950 MMADHC 63034 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 151022837 151023057 151022971 Y NA NA RND3 MCF7 ChIA-PET 22265404 RND3 370468 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 151377866 151378135 151377929 Y RND3 RND3 RND3,RBM43 IMR90 Hi-C 24141950 RND3 15390 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 151383394 151383753 151383509 Y RND3 RND3 RND3,RBM43 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RND3 9772 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 152144821 152144962 152144854 Y RIF1,RIF1,RIF1,NMI RBM43,NMI NA NA NA NA NMI 250 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 152789657 152790028 152790018 Y FMNL2 NA NA NA NA NA ARL5A 106651 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 154335936 154336181 154336134 Y RPRM RPRM NA NA NA NA RPRM 2614 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 154379200 154379581 154379374 Y NA RPRM NA NA NA NA RPRM 45878 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 157038752 157038990 157038871 Y NR4A2 NA NR4A2 MCF7 ChIA-PET 22265404 NR4A2 157870 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 157190328 157191531 157191235 Y GPD2,NR4A2 NR4A2 GPD2 IMR90 Hi-C 24141950 NR4A2 5329 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr2 157659765 157659881 157659802 Y NA NA NA NA NA NA GPD2 369963 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 158067838 158068005 158067865 Y NA GALNT5 NA NA NA NA GALNT5 44105 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 158102968 158103210 158103130 Y NA GALNT5 NR4A2,GALNT5 IMR90 Hi-C 24141950 GALNT5 8900 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 158117931 158118105 158118018 Y GALNT5 GALNT5 NA NA NA NA GALNT5 5821 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 159749466 159749905 159749830 Y NA NA LY75-CD302,TANC1,WDSUB1,BAZ2B IMR90 Hi-C 24141950 TANC1 73241 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 159994086 159994676 159994284 Y NA NA NA NA NA NA WDSUB1 146634 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 160013990 160014170 160014100 Y NA NA NA NA NA NA WDSUB1 127140 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 160350650 160351006 160350912 Y MARCH7,CD302,BAZ2B AC009506.2 NA NA NA NA AC009506.2 32883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 161014381 161014772 161014663 Y NA NA NA NA NA NA PLA2R1 97260 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 161077067 161077509 161077240 Y ITGB6 ITGB6 RBMS1,ITGB6,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB6 48890 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 161080666 161080905 161080769 Y NA ITGB6 ITGB6,RBMS1,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB6 45494 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 161098241 161098623 161098428 Y ITGB6 ITGB6 TANK,ITGB6,RBMS1 IMR90 Hi-C 24141950 ITGB6 27776 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr2 161141907 161142179 161141926 Y NA ITGB6 NA NA NA NA ITGB6 15508 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 162197345 162197490 162197464 Y NA PSMD14 NA NA NA NA PSMD14 34796 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 165766653 165766876 165766835 Y SLC38A11,COBLL1 NA NA NA NA NA COBLL1 68464 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 167070669 167070978 167070814 Y NA NA NA NA NA NA TTC21B 262316 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 170684911 170685465 170685124 Y PPIG,C2orf77,PHOSPHO2,UBR3 SSB,METTL5,UBR3 NA NA NA NA UBR3 2943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 172959536 172959659 172959591 Y DLX1,DLX2 DLX1,DLX2 NA NA NA NA DLX2 5969 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 173111540 173111762 173111691 Y ITGA6 NA ITGA6 IMR90 Hi-C 24141950 DLX2 145912 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 173302497 173302807 173302540 Y NA ITGA6 NA NA NA NA ITGA6 12415 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 173316258 173316587 173316571 Y NA ITGA6 NA NA NA NA ITGA6 26176 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 176969861 176970296 176970124 Y HOXD13,HOXD9,HOXD8,HOXD8,HOXD3,HOXD11,HOXD10 HOXD13,HOXD11,HOXD4 NA NA NA NA HOXD11 2917 CAGE HCC1806 hg19 FANTOM5 3.29625082319399 chr2 178036272 178036551 178036470 Y NFE2L2 HNRNPA3,AC079305.8 LOC100130691,NFE2L2,AGPS,HNRNPA3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNRNPA3 38740 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 178100990 178101571 178101482 Y NA HNRNPA3,AC079305.8,MIR3128,AC079305.10 NA NA NA NA MIR3128 17167 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 178104644 178105169 178104872 Y NFE2L2,NFE2L2,HNRNPA3 HNRNPA3,AC079305.8,MIR3128,AC079305.10 NA NA NA NA MIR3128 13569 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr2 178116726 178117036 178116927 Y NFE2L2,NFE2L2,HNRNPA3 HNRNPA3,AC079305.8,MIR3128,AC079305.10 NA NA NA NA MIR3128 1702 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 178131060 178131559 178131324 Y NA MIR3128,AC079305.10 NA NA NA NA AC079305.10 3973 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 178176683 178176989 178176836 Y NA AC079305.10 NA NA NA NA AC079305.10 49596 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 180044911 180045098 180045020 Y SESTD1 NA NA NA NA NA SESTD1 82419 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 181749072 181749389 181749231 Y NA FTH1P20 NA NA NA NA FTH1P20 12931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 183839050 183839414 183839395 Y NA NA NA NA NA NA NCKAP1 62172 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 183877830 183878146 183878099 Y NA NCKAP1 NA NA NA NA NCKAP1 23440 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 187409105 187409391 187409239 Y ITGAV,ITGAV ITGAV ITGAV MCF7 ChIA-PET 22265404 ITGAV 43401 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 189168145 189168606 189168510 Y NA GULP1 NA NA NA NA GULP1 13749 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 189391407 189391613 189391501 Y GULP1 NA NA NA NA NA GULP1 237011 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 190324760 190324912 190324838 Y NA WDR75 NA NA NA NA WDR75 20601 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 191443312 191443866 191443668 Y NA TMEM194B TMEM194B MCF7 ChIA-PET 22265404 TMEM194B 45864 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 191826753 191827142 191827070 Y NA AC067945.3 NA NA NA NA AC067945.3 29151 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 191984586 191984681 191984634 Y NA STAT4 NA NA NA NA STAT4 29641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 192112527 192112680 192112632 Y NA MYO1B NA NA NA NA MYO1B 4616 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 192170125 192170408 192170266 Y NA NA NA NA NA NA MYO1B 62214 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 192503383 192503649 192503532 Y OBFC2A NA OBFC2A K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 AC098617.1 205616 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr2 194838514 194838698 194838568 Y NA NA NA NA NA NA SLC39A10 1600003 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 196427017 196427173 196427106 Y NA SLC39A10 SLC39A10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC39A10 11528 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 197023417 197023933 197023871 Y NA STK17B NA NA NA NA STK17B 15294 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 197097649 197097961 197097892 Y NA NA NA NA NA NA STK17B 58422 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 197529863 197529926 197529879 Y NA CCDC150 NA NA NA NA CCDC150 27585 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 197818777 197818924 197818851 Y NA PGAP1 PGAP1,ANKRD44 IMR90 Hi-C 24141950 PGAP1 28257 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr2 197934286 197934620 197934500 Y NA NA NA NA NA NA PGAP1 143766 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 201172384 201172536 201172446 Y NA SPATS2L NA NA NA NA SPATS2L 3780 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 201270357 201270484 201270442 Y CLK1,CLK1,BZW1,BZW1,BZW1 NA NA NA NA NA SPATS2L 101753 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 201978583 201978718 201978642 Y CLK1,CLK1,TRAK2,STRADB,CFLAR,CFLAR,CFLAR,CASP8,FAM126B,CFLAR NDUFB3,FAM126B,AC007272.3,CFLAR NA NA NA NA CFLAR 109 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 201989489 201990098 201989672 Y BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10 AC007272.3,CFLAR NA NA NA NA CFLAR 10662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 201995421 201995893 201995513 Y BZW1,BZW1,BZW1,CLK1,CLK1,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10 AC007272.3,CFLAR,CASP10 NA NA NA NA CFLAR 16594 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 202078581 202078959 202078777 Y CASP10 CASP10,CASP8 NA NA NA NA CASP8 17207 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 202102159 202102434 202102342 Y NA CASP8 NA NA NA NA CASP8 5993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 202209480 202209837 202209779 Y NA ALS2CR12,STRADB NA NA NA NA ALS2CR12 10284 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 202898182 202898685 202898353 Y TMEM237,FZD7 NA NA NA NA NA PSMA2P3 143335 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 203231501 203231745 203231624 Y NA BMPR2 BMPR2,NOP58 IMR90 Hi-C 24141950 BMPR2 7914 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 206613471 206613845 206613585 Y NA NA NA NA NA NA NRP2 68757 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 206948392 206948813 206948647 Y NA AC007383.3,INO80D NA NA NA NA INO80D 214 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 207076453 207076789 207076513 Y NA NA NA NA NA NA NDUFS1 54126 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr2 208007936 208008436 208008192 Y METTL21A,METTL21A,KLF7,CREB1 KLF7 NA NA NA NA KLF7 21555 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 208027980 208028625 208028335 Y CREB1,KLF7 KLF7 NA NA NA NA KLF7 1366 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 208195614 208195873 208195761 Y NA NA KLF7,CREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AC007879.7 93240 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 208202390 208203219 208202610 Y NA NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AC007879.7 100016 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 208395422 208395980 208395659 Y PLEKHM3,METTL21A,METTL21A,CREB1 CREB1,AC007879.5 NA NA NA NA AC007879.5 2903 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 208472249 208472458 208472354 Y NA METTL21A NA NA NA NA METTL21A 16194 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 208609048 208609450 208609191 Y NA CCNYL1,FZD5 NA NA NA NA FZD5 22837 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 210580281 210580584 210580403 Y NA NA NA NA NA NA RPE 284705 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 212906311 212906509 212906411 Y NA NA NA NA NA NA ERBB4 495056 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 213770329 213770669 213770422 Y NA NA NA NA NA NA IKZF2 244482 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 213842063 213842076 213842069 Y IKZF2,IKZF2 NA NA NA NA NA IKZF2 173075 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 214053816 214053901 214053846 Y NA IKZF2 IKZF2 IMR90 Hi-C 24141950 IKZF2 38665 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 214094712 214094811 214094765 Y LOC100130451 NA NA NA NA NA SPAG16 52302 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 216865894 216866240 216866102 Y TMEM169,PECR,MREG MREG NA NA NA NA MREG 30579 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 218088198 218088590 218088283 Y NA NA DIRC3,IGFBP5,IGFBP2 IMR90 Hi-C 24141950 IGFBP2 592647 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 218754028 218754172 218754100 Y NA NA NA NA NA NA HMGB1P9 308985 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 219155683 219156025 219155719 Y CXCR2,CXCR2,ARPC2,ARPC2,ZNF142,USP37,SLC11A1,PNKD AAMP,PNKD,TMBIM1 NA NA NA NA TMBIM1 374 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 219759139 219759434 219759370 Y WNT6,WNT10A WNT6,WNT10A NA NA NA NA WNT10A 16054 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 219761045 219761550 219761369 Y USP37,ZNF142,ZFAND2B,TUBA4A,CNPPD1,ANKZF1,ANKZF1,WNT10A WNT6,WNT10A NA NA NA NA WNT10A 17960 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 220553753 220554082 220553876 Y NA AC009502.1 DES,SLC4A3 K562 5C 22955621 AC009502.1 6236 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 221000091 221000153 221000122 Y NA NA EPHA4 IMR90 Hi-C 24141950 AC009502.1 452574 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 221093432 221093609 221093525 Y NA NA EPHA4 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AC009502.1 545915 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 222826690 222827411 222827014 Y NA NA EPHA4 IMR90 Hi-C 24141950 PAX3 334304 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 223155643 223155970 223155818 Y PAX3,CCDC140 PAX3 NA NA NA NA PAX3 5745 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 224452508 224452858 224452683 Y SCG2 NA NA NA NA NA AP1S3 247886 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 226983188 226983709 226983518 Y NA NA IRS1,LOC646736 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AC068138.1 64378 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 227002262 227002653 227002458 Y NA AC068138.1 LOC646736,IRS1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AC068138.1 45434 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 227514922 227515156 227515015 Y NA NA IRS1,LOC646736 IMR90 Hi-C 24141950 IRS1 147319 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 227517160 227517436 227517301 Y IRS1 NA IRS1,LOC646736 IMR90 Hi-C 24141950 IRS1 145039 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 228437239 228437625 228437329 Y NA NA NA NA NA NA AGFG1 102371 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 228568825 228569005 228568935 Y SLC19A3 SLC19A3 NA NA NA NA SLC19A3 11723 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 230736228 230736612 230736477 Y SP110 FBXO36,TRIP12 NA NA NA NA FBXO36 48406 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 230784453 230784592 230784556 Y NA FBXO36,TRIP12 NA NA NA NA FBXO36 426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 231636017 231636396 231636213 Y NA BANF1P3 NA NA NA NA BANF1P3 47899 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 231833929 231834350 231834190 Y GPR55 NA NA NA NA NA PSMD1 85228 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 232229850 232230117 232229960 Y NA B3GNT7 NA NA NA NA B3GNT7 28137 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 232277113 232277443 232277206 Y C2orf72 B3GNT7,SNORD82 NA NA NA NA B3GNT7 18859 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 232468888 232470128 232469532 Y DIS3L2,PTMA,NMUR1 NA NA NA NA NA NMUR1 75682 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 232485741 232486244 232485851 Y NA NA NA NA NA NA PTMA 83361 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 232505425 232505799 232505482 Y NA NA PDE6D IMR90 Hi-C 24141950 PTMA 63806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 232507409 232507767 232507481 Y NA NA PDE6D IMR90 Hi-C 24141950 PTMA 61838 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 232526700 232527324 232527119 Y DIS3L2 PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 42281 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 232530920 232531416 232531295 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 38189 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 232566219 232566469 232566340 Y NA PTMA PTMA K562 ChIA-PET 22265404 PTMA 3136 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 233766797 233767190 233766879 Y NA C2orf82 NA NA NA NA C2orf82 46817 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 234630754 234630813 234630784 Y NA UGT1A6 NA NA NA NA UGT1A6 32501 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 235282322 235282425 235282352 Y ARL4C NA NA NA NA NA ARL4C 121272 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 236910231 236910384 236910319 Y NA NA NA NA NA NA AC079135.1 163706 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 237482983 237483115 237483021 Y NA NA NA NA NA NA IQCA1 68798 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 237640726 237641053 237640951 Y NA NA IQCA1,CXCR7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IQCA1 226541 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 237657869 237658188 237658029 Y NA NA CXCR7 MCF7 ChIA-PET 22265404 IQCA1 243684 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 237678524 237678883 237678772 Y NA NA IQCA1,CXCR7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IQCA1 264339 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 237685373 237686074 237685499 Y CXCR7 NA IQCA1,CXCR7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IQCA1 271188 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 237762255 237762398 237762327 Y NA NA NA NA NA NA COPS8 229557 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 238038460 238038824 238038818 Y NA COPS8,AC105760.2 COPS8,COL6A3,MLPH,PRLH,RAB17,LRRFIP1 IMR90 Hi-C 24141950 AC105760.2 46000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 238398938 238399241 238399144 Y NA MLPH NA NA NA NA MLPH 6867 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 238583352 238583931 238583637 Y UBE2F,LRRFIP1 LRRFIP1 NA NA NA NA LRRFIP1 49133 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 238968617 238969014 238968782 Y NA SCLY NA NA NA NA SCLY 1087 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 239050654 239050828 239050729 Y KLHL30 KLHL30,FAM132B NA NA NA NA KLHL30 5291 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 239347857 239348510 239348285 Y ASB1 ASB1 NA NA NA NA ASB1 14474 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr2 240168373 240168774 240168689 Y NA NA NA NA NA NA HDAC4 152574 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 240196255 240196671 240196554 Y HDAC4 NA NA NA NA NA HDAC4 124677 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 240196933 240197336 240197049 Y HDAC4 NA NA NA NA NA HDAC4 124012 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 241309624 241309945 241309791 Y GPC1 NA PP14571,GPC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPC1 63143 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr2 241366341 241366661 241366471 Y GPR35,GPC1 GPC1,AC110619.2 NA NA NA NA GPC1 6427 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 241373489 241373922 241373594 Y GPC1 GPC1,AC110619.2 NA NA NA NA GPC1 401 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 241395144 241395496 241395485 Y NA GPC1,AC110619.2 NA NA NA NA AC110619.2 1013 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 241585712 241586190 241585819 Y DUSP28,CAPN10,GPR35,MTERFD2 NA NA NA NA NA CAPN10 61579 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr2 242304310 242304654 242304483 Y FARP2 HDLBP,FARP2 NA NA NA NA FARP2 10652 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr2 242425566 242425726 242425646 Y NA STK25 NA NA NA NA STK25 21419 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 352488 352859 352625 Y SRXN1,FAM110A,RBCK1 SOX12,NRSN2,RP5-1103G7.4,TRIB3,RBCK1 NA NA NA NA TRIB3 6402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 382514 382753 382693 Y CSNK2A1,ZCCHC3,TRIB3,RBCK1 TRIB3,RBCK1 NA NA NA NA RBCK1 3389 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 1398801 1399138 1399021 Y FKBP1A FKBP1A SNPH,RAD21L1,FKBP1A-SDCBP2,LOC100507495 IMR90 Hi-C 24141950 FKBP1A 26995 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 1415597 1415981 1415837 Y NA FKBP1A,NSFL1C FKBP1A-SDCBP2 IMR90 Hi-C 24141950 NSFL1C 36506 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 1809297 1809437 1809336 Y SDCBP2,SIRPA,SIRPA,SIRPA NA SIRPA,STK35 IMR90 Hi-C 24141950 SIRPA 63717 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 1943238 1943441 1943340 Y NA NA NA NA NA NA SIRPA 70084 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 3200687 3201082 3200885 Y NA DDRGK1,ITPA,SLC4A11 NA NA NA NA ITPA 13173 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 3932717 3933076 3932937 Y NA NA MIR103B2,PANK2 IMR90 Hi-C 24141950 RNF24 61153 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 3993168 3993585 3993445 Y PANK2,PANK2,RNF24,RNF24 RNF24,FTLP3 NA NA NA NA RNF24 644 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 4674724 4674919 4674762 Y NA PRNP NA NA NA NA PRNP 9842 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 5046140 5046913 5046758 Y PRNP,PRNP,RASSF2,RASSF2,SLC23A2 NA SLC23A2,C20orf30,RASSF2,PCNA,PCNA-AS1,PRND,PRNT,CDS2 IMR90 Hi-C 24141950 SLC23A2 57201 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 5059148 5059500 5059412 Y PRNP,PRNP,RASSF2,RASSF2,SLC23A2 PCNA,CDS2 NA NA NA NA PCNA 45772 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 5553446 5553705 5553635 Y NA GPCPD1 NA NA NA NA GPCPD1 35967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 5589880 5590681 5590650 Y CDS2,TRMT6,C20orf196,GPCPD1 GPCPD1 NA NA NA NA GPCPD1 208 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 5626124 5626530 5626234 Y TRMT6,GPCPD1 GPCPD1 GPCPD1,C20orf196 IMR90 Hi-C 24141950 GPCPD1 36452 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 5637936 5638327 5638312 Y NA GPCPD1 C20orf196,GPCPD1,TRMT6 IMR90 Hi-C 24141950 GPCPD1 48264 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 6594261 6594618 6594466 Y NA NA NA NA NA NA BMP2 151693 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 8412863 8413194 8412910 Y TMX4,PLCB1 NA NA NA NA NA PLCB1 302039 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 10307719 10307737 10307728 Y NA NA NA NA NA NA MKKS 105133 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 10492212 10492484 10492413 Y NA NA NA NA NA NA MKKS 79342 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 13757612 13757978 13757886 Y NA ESF1 NA NA NA NA ESF1 5554 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 14248741 14249040 14248807 Y NA NA NA NA NA NA FLRT3 67222 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 17538189 17538505 17538334 Y NA BFSP1,DSTN NA NA NA NA BFSP1 9360 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 17557154 17557457 17557241 Y NA BFSP1,DSTN NA NA NA NA DSTN 8646 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 17591305 17591483 17591343 Y NA BFSP1,DSTN NA NA NA NA DSTN 42797 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 17946136 17946538 17946496 Y SNX5,SNX5 SNORD17,SNX5,PTMAP3 NA NA NA NA SNX5 1085 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 18276093 18276447 18276109 Y CSRP2BP ZNF133 NA NA NA NA ZNF133 8972 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 19783112 19783320 19783290 Y NA NA RIN2,SLC24A3 IMR90 Hi-C 24141950 RIN2 81845 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 19894866 19895287 19895037 Y NA RIN2 NA NA NA NA RIN2 29701 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 19983799 19983958 19983881 Y NA NAA20 NA NA NA NA NAA20 11802 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 20347223 20347613 20347293 Y NA NA NA NA NA NA CRNKL1 312533 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 23031353 23032100 23031620 Y GZF1,THBD,CD93 THBD NA NA NA NA THBD 2975 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 24709936 24710315 24710275 Y NA NA NA NA NA NA ACSS1 327301 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 24941460 24941976 24941729 Y CST7,C20orf3 NA NA NA NA NA ACSS1 95640 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 25214082 25214352 25214216 Y ENTPD6,PYGB ENTPD6,PYGB NA NA NA NA PYGB 12353 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 26116339 26116766 26116505 Y NA NA NA NA NA NA MIR663A 113396 CAGE HCC1806 hg19 FANTOM5 5.41526920953298 chr20 30148718 30149081 30148825 Y HCK,HM13 HM13,ID1 NA NA NA NA ID1 42005 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 30182515 30183026 30182914 Y NA ID1 HM13 MCF7 ChIA-PET 22265404 ID1 8060 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 30183712 30184220 30184085 Y ID1 ID1 HM13 MCF7 ChIA-PET 22265404 ID1 6866 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr20 30191850 30192346 30192159 Y ID1 ID1 NA NA NA NA ID1 764 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chr20 30196293 30196740 30196417 Y ID1 ID1 NA NA NA NA ID1 5207 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 30255856 30255976 30255884 Y NA NA NA NA NA NA BCL2L1 53816 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 30263480 30263875 30263840 Y NA BCL2L1 NA NA NA NA BCL2L1 45917 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 30300504 30300973 30300648 Y NA BCL2L1,TPX2 NA NA NA NA BCL2L1 8819 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 30700574 30701059 30700820 Y HCK,C20orf112,TM9SF4,PLAGL2 TM9SF4 NA NA NA NA TM9SF4 5265 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 30793339 30793589 30793452 Y HCK,TM9SF4,PLAGL2 PLAGL2,POFUT1 NA NA NA NA PLAGL2 5 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 31063072 31063625 31063366 Y NA NA ASXL1 IMR90 Hi-C 24141950 C20orf112 107251 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 31373290 31373636 31373312 Y C20orf185,DNMT3B,DNMT3B COMMD7,DNMT3B,MAPRE1 MAPRE1 IMR90 Hi-C 24141950 DNMT3B 25099 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 31597104 31597733 31597394 Y BPIL1 NA NA NA NA NA MAPRE1 191405 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 32366967 32367080 32367022 Y NA ZNF341,CHMP4B NA NA NA NA CHMP4B 30030 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 32400902 32401106 32400958 Y CHMP4B CHMP4B NA NA NA NA CHMP4B 3792 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 32623943 32624156 32623948 Y NA RALY,RP5-1125A11.1 NA NA NA NA RP5-1125A11.1 43780 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 32690137 32690399 32690268 Y NA EIF2S2,RPS2P1 NA NA NA NA EIF2S2 7739 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 33064297 33064587 33064427 Y ACSS2 FDX1P1,DYNLRB1 NA NA NA NA FDX1P1 2018 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 33236140 33236313 33236227 Y AHCY,TP53INP2,MYH7B PIGU NA NA NA NA PIGU 26597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 33263826 33263865 33263846 Y MYH7B PIGU,TP53INP2 NA NA NA NA PIGU 916 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 33861234 33861630 33861491 Y NA EDEM2,EIF6,FAM83C NA NA NA NA EDEM2 2298 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 34470947 34471302 34471125 Y NA RNU4-40P NA NA NA NA RNU4-40P 2279 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 34652590 34653055 34652672 Y NA EPB41L1 LOC647979,PHF20,SCAND1,C20orf152,EPB41L1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EPB41L1 24371 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 35464098 35464342 35464182 Y RBL1,DSN1,DSN1 NA NA NA NA NA DSN1 63877 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 35490387 35490628 35490526 Y MANBAL,KIAA0889 NA KIAA0889 MCF7 ChIA-PET 22265404 SAMHD1 87618 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 35633884 35634240 35634054 Y NA NA NA NA NA NA SAMHD1 55638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 35851515 35851770 35851561 Y SAMHD1,SRC,MANBAL,CTNNBL1 RPN2 NA NA NA NA RPN2 46702 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 36132626 36132893 36132840 Y NA BLCAP NA NA NA NA BLCAP 21440 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 36135409 36135682 36135567 Y NA BLCAP NA NA NA NA BLCAP 18651 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 37229958 37230063 37230010 Y ARHGAP40 ARHGAP40 NA NA NA NA ARHGAP40 1381 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr20 37280609 37280856 37280791 Y SLC32A1 NA NA NA NA NA ARHGAP40 52032 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 39631777 39632207 39632178 Y NA RNU2-52P,TOP1 PLCG1,TOP1,ZHX3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNU2-52P 18638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 39785946 39786458 39785968 Y CHD6,PLCG1 PLCG1 NA NA NA NA PLCG1 22346 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 42286061 42286420 42286177 Y SRSF6,L3MBTL1,MYBL2 MYBL2 MYBL2 IMR90 Hi-C 24141950 MYBL2 7334 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 42780306 42780638 42780459 Y NA JPH2 NA NA NA NA JPH2 33580 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 43582253 43582415 43582335 Y NA PABPC1L,TOMM34,STK4 NA NA NA NA TOMM34 4712 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 43965327 43965544 43965453 Y SDC4 SDC4,SYS1,SYS1-DBNDD2 NA NA NA NA SDC4 9520 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 44136889 44137182 44137082 Y NA WFDC2 NA NA NA NA WFDC2 40543 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 44737653 44737771 44737721 Y WFDC3,C20orf165 NCOA5,RPL13P2,CD40 SLC12A5,CD40 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD40 7140 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 45251611 45251999 45251807 Y NA NA NA NA NA NA TP53RK 64419 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 45870109 45870518 45870490 Y ZMYND8,NCOA3 NA NA NA NA NA ZMYND8 113049 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 45946049 45946481 45946179 Y NA ZMYND8 NA NA NA NA ZMYND8 37086 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 45962816 45963214 45963054 Y NA ZMYND8 NA NA NA NA ZMYND8 20353 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 45987479 45988292 45987961 Y NA ZMYND8 ZMYND8,LOC100131496,NCOA3 IMR90 Hi-C 24141950 ZMYND8 3912 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 45989347 45989834 45989660 Y SULF2 ZMYND8 ZMYND8,LOC100131496,NCOA3 IMR90 Hi-C 24141950 ZMYND8 5780 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 46021549 46021674 46021604 Y NA ZMYND8 ZMYND8,LOC100131496,SLC2A10,EYA2,NCOA3,PARD6B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 37982 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 46162026 46162326 46162051 Y NA NCOA3 NA NA NA NA NCOA3 33425 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 46320177 46320280 46320230 Y SULF2 NA NA NA NA NA SULF2 93080 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 46438543 46438763 46438619 Y SULF2,SULF2 SULF2 NA NA NA NA SULF2 25183 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 46653872 46653986 46653882 Y NA NA SULF2 MCF7 ChIA-PET 22265404 SULF2 240512 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr20 47397993 47398168 47398081 Y NA PREX1 NA NA NA NA PREX1 44252 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 47407398 47407765 47407606 Y NA PREX1 NA NA NA NA PREX1 34655 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 47547466 47547777 47547635 Y ZNFX1,ARFGEF2 ARFGEF2 NA NA NA NA ARFGEF2 11039 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 48317219 48317517 48317348 Y ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5 B4GALT5,SNRPFP1 NA NA NA NA B4GALT5 10898 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 48317822 48318037 48318021 Y ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5 B4GALT5,SNRPFP1 NA NA NA NA B4GALT5 10378 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 48532841 48533167 48533004 Y SPATA2,SPATA2 SPATA2,RNF114 NA NA NA NA SPATA2 2761 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 48760872 48761304 48761158 Y B4GALT5,SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB UBE2V1,TMEM189-UBE2V1,TMEM189,RP11-112L6.4,CEBPB NA NA NA NA TMEM189-UBE2V1 6870 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 48763277 48763795 48763638 Y B4GALT5,SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB UBE2V1,TMEM189-UBE2V1,TMEM189,RP11-112L6.4,CEBPB NA NA NA NA TMEM189-UBE2V1 4379 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 48903106 48903611 48903352 Y NA RP11-290F20.3 LOC284751,PARD6B,PTPN1,FAM65C,MIR645,CEBPB IMR90 Hi-C 24141950 RP11-290F20.3 21083 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 49047228 49047674 49047434 Y NA NA LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 77217 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr20 49055532 49055924 49055757 Y SNAI1,TMEM189,CEBPB,PTPN1 NA LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 68967 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 49407275 49407470 49407371 Y MOCS3 BCAS4 ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3 MCF7,K562 ChIA-PET 22265404 BCAS4 1961 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 49516325 49516426 49516399 Y ADNP ADNP NA NA NA NA ADNP 29532 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 49539044 49539098 49539071 Y NA ADNP,DPM1,MOCS3 NA NA NA NA ADNP 6860 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 49650336 49650514 49650422 Y NA KCNG1 KCNG1,NFATC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KCNG1 12670 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 50247670 50248383 50248096 Y NA NA NA NA NA NA RP5-827A12.2 100689 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 50252715 50253081 50252915 Y NA NA NA NA NA NA RP5-827A12.2 95991 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 50305128 50305301 50305215 Y NA RP5-827A12.2 NA NA NA NA RP5-827A12.2 43771 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 50361169 50361338 50361278 Y NA RP5-827A12.2,ATP9A NA NA NA NA RP5-827A12.2 12097 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 50366772 50367203 50366881 Y ZFP64,ATP9A RP5-827A12.2,ATP9A,SALL4 NA NA NA NA ATP9A 15970 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 50383575 50384083 50383723 Y ATP9A RP5-827A12.2,ATP9A,SALL4 NA NA NA NA ATP9A 402 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 51110040 51110185 51110129 Y NA NA NA NA NA NA RP4-723E3.1 284856 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 51110889 51111034 51110969 Y NA NA NA NA NA NA RP4-723E3.1 285705 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52195908 52196455 52196142 Y ZNF217 ZNF217 NA NA NA NA ZNF217 27991 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52239995 52240318 52240062 Y ZNF217 ZNF217 SUMO1P1,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 15549 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 52355086 52355238 52355182 Y NA NA ZNF217,BCAS1 IMR90 Hi-C 24141950 ZNF217 130640 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr20 52374184 52374569 52374228 Y ZNF217 NA ZNF217,BCAS1,SUMO1P1 IMR90 Hi-C 24141950 SUMO1P1 115527 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52444580 52444892 52444748 Y NA SUMO1P1 ZNF217,SUMO1P1,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 45204 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52445043 52445455 52445100 Y NA SUMO1P1 ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 44641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52445816 52446339 52446069 Y ZNF217 SUMO1P1 ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 43757 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 52482655 52483054 52482957 Y NA SUMO1P1 NA NA NA NA SUMO1P1 7042 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52519942 52520105 52520009 Y ZNF217 SUMO1P1 SUMO1P1,ZNF217,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 29846 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52565886 52566139 52565988 Y ZNF217 NA NA NA NA NA SUMO1P1 75790 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 52740107 52740637 52740253 Y NA CYP24A1 DOK5,SULF2,ZMYND8,BMP7,PTPRT IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CYP24A1 47875 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 52749873 52750284 52750109 Y NA CYP24A1 NA NA NA NA CYP24A1 38228 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 55264382 55264603 55264519 Y NA PTMAP6 BMP7,TFAP2C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTMAP6 9967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 55362710 55362938 55362792 Y AURKA,TFAP2C NA TFAP2C MCF7 ChIA-PET 22265404 PTMAP6 88140 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 55379556 55380011 55379738 Y TFAP2C NA TFAP2C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTMAP6 104986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 55780606 55780977 55780774 Y NA NA NA NA NA NA BMP7 58708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 56273255 56273697 56273462 Y PMEPA1,PMEPA1,PMEPA1 PMEPA1 NA NA NA NA PMEPA1 10895 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 60719468 60719634 60719593 Y SS18L1,GTPBP5 LSM14B,PSMA7,SS18L1 NA NA NA NA SS18L1 2646 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr20 60874912 60875240 60875071 Y NA MIR4758 NA NA NA NA ADRM1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 60924549 60924827 60924688 Y TAF4,SS18L1,SLCO4A1,C20orf151,LAMA5 ADRM1,MIR4758,LAMA5,RPS21 NA NA NA NA LAMA5 15541 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 60940876 60941209 60940968 Y PSMA7,SLCO4A1,RPS21,NTSR1,C20orf20,C20orf151,ADRM1,LAMA5 MIR4758,LAMA5,RPS21,CABLES2 NA NA NA NA LAMA5 508 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 61076779 61077313 61077048 Y DPH3P1,OGFR,DIDO1 GATA5 NA NA NA NA GATA5 27753 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr20 61283206 61283870 61283565 Y OSBPL2,DPH3P1,OGFR,DIDO1 SLCO4A1 NA NA NA NA SLCO4A1 11409 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr20 61371540 61371927 61371747 Y DPH3P1,DIDO1,OGFR NTSR1 NA NA NA NA NTSR1 33351 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 61554875 61554902 61554887 Y DIDO1 DIDO1,SLC17A9 NA NA NA NA DIDO1 12402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 61555881 61556606 61556058 Y DIDO1 DIDO1,SLC17A9 NA NA NA NA DIDO1 10698 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 62176586 62176848 62176717 Y NA EEF1A2,PPDPF,PTK6 NA NA NA NA PTK6 9863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr20 62494990 62495823 62495679 Y NA ZBTB46,TPD52L2,DNAJC5,RNU1-134P NA NA NA NA TPD52L2 394 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr21 9881917 9882087 9882000 Y NA NA NA NA NA NA MIR3648 58085 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 11095741 11096142 11095942 Y BAGE2,BAGE BAGE2 NA NA NA NA BAGE2 838 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 15450488 15450803 15450511 Y NA NA NA NA NA NA AP001347.6 52746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 16345757 16346184 16346094 Y NA NA NA NA NA NA NRIP1 89137 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 17264124 17264427 17264344 Y NA NA NA NA NA NA USP25 163780 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 17924273 17924626 17924451 Y NA NA NA NA NA NA USP25 823929 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr21 17960667 17961305 17960883 Y NA NA NA NA NA NA USP25 860323 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 18809176 18809383 18809253 Y NA NA NA NA NA NA CXADR 73317 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 18886111 18886899 18886569 Y NA CXADR NA NA NA NA CXADR 3411 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 18891260 18891546 18891459 Y NA CXADR NA NA NA NA CXADR 8560 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 18984370 18984546 18984496 Y NA BTG3 NA NA NA NA BTG3 1105 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 26962945 26963646 26963455 Y NA MIR155HG,MRPL39 NA NA NA NA MRPL39 14183 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 28218728 28219247 28219071 Y ADAMTS5,ADAMTS1 ADAMTS1 NA NA NA NA ADAMTS1 3000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 29476694 29476903 29476871 Y NA NA NA NA NA NA AF131217.1 568267 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 29656574 29656747 29656720 Y NA NA ADAMTS1,ADAMTS5 IMR90 Hi-C 24141950 AF131217.1 388423 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 29660800 29661042 29660922 Y NA NA ADAMTS1,ADAMTS5 IMR90 Hi-C 24141950 AF131217.1 384128 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr21 29765694 29766009 29765812 Y NA NA NA NA NA NA AF131217.1 279161 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr21 29791196 29791277 29791236 Y NA NA ADAMTS1,LINC00113 IMR90 Hi-C 24141950 AF131217.1 253893 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 30006167 30006692 30006407 Y NA AF131217.1 ADAMTS1,LINC00161 IMR90 Hi-C 24141950 AF131217.1 38478 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 30274097 30274402 30274148 Y NA N6AMT1 NA NA NA NA N6AMT1 18404 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 30374865 30375265 30375125 Y C21orf7,N6AMT1,LTN1,USP16 LTN1,RPL23P2,RWDD2B,USP16 LTN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL23P2 6511 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr21 31455603 31455795 31455698 Y NA NA NA NA NA NA CLDN8 130596 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 33042550 33042842 33042696 Y NA SOD1,SNORA81 NA NA NA NA SNORA81 7931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 33301390 33301573 33301482 Y NA NA NA NA NA NA SCAF4 199002 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 34718616 34718973 34718794 Y OLIG2,OLIG1 IFNAR1 NA NA NA NA IFNAR1 23882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 34755296 34756154 34755534 Y IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2 IFNGR2 IFNGR2 MCF7 ChIA-PET 22265404 IFNGR2 17048 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 35574029 35574459 35574413 Y NA NA NA NA NA NA SLC5A3 130159 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 36143971 36144119 36144107 Y NA NA NA NA NA NA SLC5A3 700101 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 36185927 36186112 36186038 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA SLC5A3 742057 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 36219873 36220239 36220187 Y NA NA NA NA NA NA SLC5A3 776003 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 36233216 36233747 36233583 Y NA NA NA NA NA NA SLC5A3 789346 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 36281882 36282257 36282001 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA SLC5A3 838012 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 36336896 36337096 36337005 Y NA NA NA NA NA NA SLC5A3 893026 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 36349860 36350141 36349984 Y NA NA NA NA NA NA SLC5A3 905990 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 37486095 37486219 37486157 Y NA CBR1,SETD4,CBR3,DOPEY2 NA NA NA NA CBR3 18991 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 37670543 37670742 37670650 Y MORC3 MORC3 NA NA NA NA MORC3 19745 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 37712607 37712952 37712729 Y NA MORC3,CHAF1B NA NA NA NA MORC3 22120 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 38500086 38500176 38500125 Y NA NA NA NA NA NA TTC3 56560 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 38623241 38623485 38623453 Y NA DSCR9,AP001432.14,DSCR3 NA NA NA NA DSCR3 14777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 38630405 38630786 38630710 Y DYRK1A,DYRK1A AP001432.14,DSCR3 NA NA NA NA DSCR3 7476 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 38935728 38936411 38936235 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 199636 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 39112163 39112449 39112332 Y NA NA NA NA NA NA DYRK1A 376071 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 39114208 39114263 39114237 Y NA NA NA NA NA NA DSCR4 377191 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 40127775 40128062 40127985 Y NA ETS2 NA NA NA NA ETS2 47169 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 40277371 40277733 40277541 Y NA NA ETS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ETS2 102140 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr21 40393264 40393350 40393326 Y NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 160427 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 40673787 40673929 40673891 Y NA BRWD1,HMGN1 NA NA NA NA BRWD1 17556 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 40742482 40742667 40742571 Y NA HMGN1,WRB BRWD1,BRWD1-IT2,WRB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WRB 7503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 41428469 41428477 41428473 Y NA NA NA NA NA NA C21orf88 445721 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 42743414 42743752 42743584 Y NA MX2,MX1 NA NA NA NA MX2 11544 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 43089019 43089272 43089054 Y RIPK4 NA LINC00111 MCF7 ChIA-PET 22265404 RIPK4 95994 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 43188787 43189188 43188843 Y RIPK4 RIPK4 NA NA NA NA RIPK4 3521 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr21 43518001 43518239 43518148 Y ZNF295,ABCG1,ABCG1,ABCG1,ABCG1 NA NA NA NA NA ABCG1 99560 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44278308 44278654 44278481 Y NA WDR4,NDUFV3 NA NA NA NA WDR4 19024 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44582937 44583304 44583126 Y NA NA HSF2BP,LINC00313,U2AF1 IMR90 Hi-C 24141950 U2AF1 57240 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44753292 44753457 44753456 Y NA NA LINC00313,HSF2BP,SIK1,LINC00319 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SIK1 91551 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 44760713 44760913 44760830 Y NA NA LINC00313,HSF2BP,SIK1,LINC00319 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SIK1 84095 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44796506 44796705 44796660 Y NA SIK1 CRYAA,SIK1,HSF2BP,RRP1B IMR90 Hi-C 24141950 SIK1 48303 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44816664 44817004 44816885 Y NA SIK1,LINC00319 NA NA NA NA SIK1 28004 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr21 44831891 44832268 44832005 Y SIK1 SIK1,LINC00319 NA NA NA NA SIK1 12740 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44908266 44908370 44908324 Y NA LINC00319,LINC00313 LINC00319,SIK1 MCF7 ChIA-PET 22265404 LINC00313 10852 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 44937659 44937875 44937741 Y PDXK LINC00313 NA NA NA NA LINC00313 40245 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 45020604 45020960 45020754 Y NA NA NA NA NA NA HSF2BP 56414 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr21 45029471 45029828 45029593 Y PDXK HSF2BP,RRP1B NA NA NA NA HSF2BP 47546 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 45080522 45080871 45080626 Y TRAPPC10,PWP2,SIK1,RRP1B HSF2BP,RRP1B NA NA NA NA RRP1B 3093 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 45132062 45132504 45132250 Y HSF2BP,PDXK PDXK NA NA NA NA PDXK 4471 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr21 45558236 45558599 45558477 Y PDXK,AGPAT3,TRAPPC10,TRPM2,ICOSLG PWP2,C21orf33 NA NA NA NA C21orf33 6749 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 45573018 45573302 45573138 Y PDXK,CSTB,TRPM2,ICOSLG PWP2,C21orf33 NA NA NA NA C21orf33 21531 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr21 45592447 45593398 45592771 Y PDXK,TRAPPC10,TRPM2,ICOSLG C21orf33 PWP2,ICOSLG IMR90 Hi-C 24141950 C21orf33 40960 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 45640329 45640509 45640452 Y TRAPPC10,TRPM2,ICOSLG ICOSLG C21orf33 IMR90 Hi-C 24141950 ICOSLG 18340 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 46097395 46097576 46097539 Y KRTAP10-7,KRTAP10-12 NA NA NA NA NA UBE2G2 122358 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 47010467 47010705 47010586 Y NA SLC19A1 PCBP3,LOC100129027,SLC19A1,COL18A1,POFUT2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 48142 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr21 47010868 47011351 47011033 Y NA SLC19A1 PCBP3,LOC100129027,SLC19A1,COL18A1,POFUT2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 48543 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr21 47442529 47442669 47442610 Y NA COL6A1 NA NA NA NA COL6A1 42878 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 18043890 18044097 18044033 Y CECR6,CECR6,MICAL3,SLC25A18 NA NA NA NA NA ATP6V1E1 65487 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 18402838 18403339 18403237 Y NA NA NA NA NA NA MICAL3 101986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 18404666 18404945 18404902 Y NA NA NA NA NA NA MICAL3 100380 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 19159081 19159242 19159165 Y NA DGCR14,SLC25A1 NA NA NA NA SLC25A1 5101 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr22 19378121 19378382 19378253 Y NA MRPL40 NA NA NA NA MRPL40 39043 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 19930770 19931097 19930953 Y ZDHHC8,COMT COMT,TXNRD2 NA NA NA NA TXNRD2 3429 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 19946096 19946477 19946360 Y NA COMT,TXNRD2 NA NA NA NA TXNRD2 18755 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 19946850 19947150 19946987 Y NA COMT,TXNRD2 NA NA NA NA TXNRD2 19509 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 20068627 20068902 20068750 Y COMT,DGCR8 DGCR8,RANBP1,TRMT2A,ZDHHC8 NA NA NA NA DGCR8 2872 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 20207380 20207531 20207452 Y NA NA NA NA NA NA RTN4R 61238 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 20863506 20864089 20863850 Y MED15 KLHL22,MED15 NA NA NA NA MED15 15306 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 20885626 20885829 20885752 Y NA KLHL22,MED15 NA NA NA NA MED15 37426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 24234499 24234593 24234547 Y NA SLC2A11,MIF NA NA NA NA MIF 308 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 24255997 24256450 24256302 Y C22orf43,CABIN1,CABIN1 MIF NA NA NA NA MIF 21806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 25390259 25390306 25390285 Y NA NA KIAA1671 MCF7 ChIA-PET 22265404 SNORD56 95078 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 26150935 26151135 26151006 Y NA NA NA NA NA NA ADRBK2 192119 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 26921035 26921055 26921043 Y TPST2 HPS4,SRRD,TFIP11,HMGB1P10 NA NA NA NA TFIP11 14564 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 26967025 26967265 26967145 Y TFIP11 HMGB1P10,TPST2 NA NA NA NA HMGB1P10 12533 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 28065247 28065726 28065530 Y PITPNB,MN1 NA MIAT,MN1 IMR90 Hi-C 24141950 MN1 129760 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 28115717 28115905 28115775 Y NA NA NA NA NA NA MN1 79581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 28314180 28314595 28314448 Y PITPNB TTC28-AS1,PITPNB NA NA NA NA PITPNB 58 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 29467563 29467858 29467701 Y NA KREMEN1 NA NA NA NA KREMEN1 497 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 29548778 29549084 29549009 Y XBP1,KREMEN1 NA NA NA NA NA EMID1 50756 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 30643780 30644513 30644215 Y GAL3ST1,LIF LIF NA NA NA NA LIF 2940 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 30653574 30654311 30654075 Y RNF215,GAL3ST1 LIF LIF IMR90 Hi-C 24141950 LIF 12734 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 31005316 31005631 31005442 Y SMTN,OSM,TBC1D10A,CCDC157,SF3A1,DUSP18,SLC35E4 TCN2,PES1,SLC35E4,CTA-963H5.5 NA NA NA NA PES1 4246 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 31298089 31298190 31298144 Y NA NA MORC2,MORC2-AS1 IMR90 Hi-C 24141950 TUG1 66473 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 31854917 31854933 31854925 Y NA SFI1,EIF4ENIF1 NA NA NA NA SFI1 27741 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 33199078 33199894 33199157 Y NA TIMP3 NA NA NA NA TIMP3 3391 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 33252376 33252746 33252411 Y NA Z98256.1 NA NA NA NA Z98256.1 1674 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 36149671 36149849 36149827 Y NA NA APOL5 IMR90 Hi-C 24141950 APOL6 107229 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr22 36396636 36396729 36396643 Y NA RBFOX2 NA NA NA NA RBFOX2 25744 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 36727482 36728450 36727733 Y APOL3 NA NA NA NA NA MYH9 53613 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 36750973 36751374 36751265 Y APOL3 MYH9 NA NA NA NA MYH9 30689 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 36759233 36759313 36759256 Y APOL3,APOL3,APOL2,APOL2,NCF4 MYH9 NA NA NA NA MYH9 22750 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 37518077 37518635 37518386 Y MFNG,MFNG,RAC2,IL2RB NA NA NA NA NA KCTD17 72298 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 37618501 37618905 37618615 Y NA C1QTNF6,RAC2 NA NA NA NA RAC2 19583 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 37655075 37655389 37655235 Y NA RAC2 CARD10,C1QTNF6,CYTH4,ELFN2 IMR90 Hi-C 24141950 RAC2 16587 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 37937864 37938255 37937972 Y SH3BP1,LGALS2,GGA1,GGA1 CARD10,CDC42EP1 CARD10,MFNG,LGALS2,PDXP,TRIOBP,ELFN2,CDC42EP1,GGA1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC42EP1 16199 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 38294842 38295023 38294932 Y CARD10,CDC42EP1,SH3BP1,MICALL1 MICALL1 NA NA NA NA MICALL1 4641 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 38351215 38351232 38351224 Y NA POLR2F,C22orf23 NA NA NA NA C22orf23 3539 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 38705287 38705445 38705426 Y NA TMEM184B NA NA NA NA TMEM184B 38247 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 39091291 39091422 39091336 Y NA CBY1,RP3-508I15.9,TOMM22,JOSD1,GTPBP1 NA NA NA NA JOSD1 4139 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 39541576 39542088 39541730 Y JOSD1,GTPBP1,SUN2,SUN2,APOBEC3G,CBX7 CBX7 NA NA NA NA CBX7 4591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 39570081 39570473 39570178 Y JOSD1,GTPBP1,SUN2,SUN2,APOBEC3G,APOBEC3H CBX7 PDGFB,SNORD83A,RNU86,SNORD83B,RPL3 MCF7 ChIA-PET 22265404 CBX7 23402 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 39608827 39609203 39608881 Y NA PDGFB NA NA NA NA PDGFB 29553 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 39704707 39705214 39704970 Y ATF4,APOBEC3A RPL3,SYNGR1 NA NA NA NA RPL3 9180 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 39784258 39784471 39784339 Y MGAT3,MGAT3,CBX7,SYNGR1 SYNGR1,TAB1 NA NA NA NA TAB1 9275 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 40781478 40781596 40781515 Y NA ADSL,SGSM3 NA NA NA NA SGSM3 16883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 40958851 40958976 40958969 Y NA NA NA NA NA NA MKL1 71730 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 41048065 41048352 41048232 Y EP300,MKL1 MKL1,GAPDHP37 ST13,MKL1,MCHR1,ADSL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 17359 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr22 41417973 41418366 41418067 Y MKL1,EP300 RP11-12M9.3 ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-12M9.3 39690 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 41460471 41460696 41460583 Y NA RP11-12M9.3,EP300 RBX1,EP300,XPNPEP3,MIR1281,RANGAP1,CHADL,L3MBTL2 IMR90 Hi-C 24141950 RP11-12M9.3 2415 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr22 41684313 41684541 41684479 Y PPPDE2,RANGAP1 RANGAP1,ZC3H7B NA NA NA NA RANGAP1 4058 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 41776948 41777130 41776981 Y NA TEF NA NA NA NA TEF 15611 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr22 41809427 41810696 41809981 Y CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF TEF,TOB2 NA NA NA NA TOB2 30331 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 41840300 41840792 41840564 Y NA TOB2,PHF5A,ACO2 NA NA NA NA TOB2 235 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr22 42332206 42332544 42332368 Y CENPM,SHISA8,TNFRSF13C SHISA8,CENPM,SEPT3 NA NA NA NA CENPM 8624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 43178512 43178746 43178699 Y NA NA NA NA NA NA A4GALT 63208 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 43319068 43319405 43319376 Y NFAM1,PACSIN2 NA NA NA NA NA ARFGAP3 66956 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 43409761 43409918 43409853 Y PACSIN2,PACSIN2 PACSIN2 NA NA NA NA PACSIN2 610 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 44705061 44705332 44705192 Y PARVB,PARVG,PARVG NA NA NA NA NA LDOC1L 186846 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 44845354 44845623 44845458 Y PARVG,PARVG LDOC1L PARVB,SAMM50,KIAA1644,LINC00207,PARVG IMR90 Hi-C 24141950 LDOC1L 46555 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 44947082 44947372 44947286 Y PARVG,PARVG NA PARVB,KIAA1644,SAMM50,LINC00229 IMR90 Hi-C 24141950 LDOC1L 54904 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 45254258 45254434 45254345 Y PHF21B NA NA NA NA NA ARHGAP8 157903 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 45501114 45501367 45501144 Y NA NA NA NA NA NA CTA-217C2.1 56295 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 45543738 45543876 45543815 Y PHF21B,NUP50,NUP50 CTA-217C2.1,NUP50 NA NA NA NA CTA-217C2.1 13786 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 45642150 45642482 45642292 Y NA KIAA0930,UPK3A LOC100506714,NUP50,KIAA0930,UPK3A,FBLN1,SMC1B IMR90 Hi-C 24141950 KIAA0930 7500 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 45944996 45945587 45945178 Y NA FBLN1 NA NA NA NA FBLN1 48878 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46035019 46035329 46035174 Y NA ATXN10 NA NA NA NA ATXN10 30349 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46041491 46041960 46041628 Y NA ATXN10 ATXN10,WNT7B,FAM118A,SMC1B,FBLN1,LOC730668,LOC100271722,MIRLET7BHG IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATXN10 23718 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 46285473 46285870 46285610 Y NA WI2-85898F10.1 FAM118A,SMC1B,ATXN10,FBLN1,WNT7B,PKDREJ,C22orf40 IMR90 Hi-C 24141950 WI2-85898F10.1 3845 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46325366 46325760 46325504 Y NA WI2-85898F10.1,WNT7B NA NA NA NA WI2-85898F10.1 43738 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46423205 46423605 46423251 Y NA RP6-109B7.3,C22orf26,RP6-109B7.4 NA NA NA NA RP6-109B7.3 23980 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46462776 46462894 46462836 Y NA RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763 NA NA NA NA RP6-109B7.4 877 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46467914 46468476 46468052 Y NA RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763 NA NA NA NA RP6-109B7.4 4143 CAGE HCC1806 hg19 FANTOM5 3.29625082319399 chr22 46474643 46475112 46474791 Y C22orf26 RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763 NA NA NA NA RP6-109B7.4 10872 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46770539 46770639 46770589 Y NA TRMU NA NA NA NA TRMU 45767 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 46928379 46928595 46928487 Y NA CELSR1,GRAMD4 NA NA NA NA CELSR1 2472 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 48035641 48035928 48035744 Y NA RP11-191L9.4 TBC1D22A IMR90 Hi-C 24141950 RP11-191L9.4 10218 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr22 50262824 50262951 50262946 Y TUBGCP6,MLC1 BRD1,ZBED4,CRELD2,ALG12 NA NA NA NA ZBED4 17334 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 50364350 50364715 50364589 Y NA PIM3 NA NA NA NA PIM3 12189 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 50743986 50744741 50744427 Y PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2 MAPK12,MAPK11,PPP6R2 NA NA NA NA PLXNB2 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr22 50891150 50891343 50891221 Y MOV10L1,TUBGCP6,HDAC10,PPP6R2,CHKB,SBF1,NCAPH2 SBF1,ADM2 NA NA NA NA SBF1 20111 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 4780474 4780964 4780800 Y EDEM1,BHLHE40,ARL8B EGOT NA NA NA NA EGOT 10310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 5028534 5029013 5028702 Y ITPR1,EDEM1,ARL8B,BHLHE40 BHLHE40 NA NA NA NA BHLHE40 9733 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 5676006 5676437 5676137 Y NA NA NA NA NA NA EDEM1 448675 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 6573697 6574039 6573711 Y NA NA NA NA NA NA EDEM1 1346366 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 9006142 9006408 9006272 Y NA RAD18 NA NA NA NA RAD18 2685 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 10233695 10234220 10233931 Y VHL,IRAK2,TATDN2 IRAK2 NA NA NA NA IRAK2 29146 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 10402355 10402452 10402401 Y FANCD2 SEC13 NA NA NA NA SEC13 41493 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 11197111 11197379 11197271 Y VGLL4,SLC6A11,SLC6A1,HRH1 HRH1 NA NA NA NA HRH1 20332 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 11314967 11316155 11315793 Y HRH1,ATG7 ATG7 NA NA NA NA ATG7 2972 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 11812040 11812191 11812115 Y NA NA NA NA NA NA VGLL4 51820 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 12398616 12399008 12398699 Y RAF1,PPARG,PPARG NA NA NA NA NA PPARG 71749 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 12567743 12567843 12567793 Y NA TSEN2,MKRN2 NA NA NA NA MKRN2 28670 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 13035460 13035932 13035883 Y CAND2,IQSEC1,HDAC11,HDAC11,IQSEC1 NA NA NA NA NA IQSEC1 76685 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 13040844 13041238 13041111 Y RAF1 NA NA NA NA NA IQSEC1 71379 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 13493281 13493606 13493395 Y NA NUP210,HDAC11 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HDAC11 25618 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 13876231 13876614 13876422 Y WNT7A WNT7A NA NA NA NA WNT7A 43004 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 14167210 14167731 14167391 Y TMEM43,XPC CHCHD4,TMEM43 NA NA NA NA TMEM43 2770 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 15704167 15704382 15704274 Y ANKRD28,CAPN7 NA NA NA NA NA HACL1 62829 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 15712856 15713111 15712984 Y NA NA NA NA NA NA HACL1 71518 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 15835826 15836097 15835987 Y SH3BP5,SH3BP5,EAF1,COLQ,DPH3,ANKRD28 NA NA NA NA NA ANKRD28 63181 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 16324333 16324353 16324342 Y NA DPH3,OXNAD1 NA NA NA NA OXNAD1 19627 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 16550067 16550455 16550405 Y PLCL2,OXNAD1,RFTN1 RFTN1 NA NA NA NA RFTN1 3078 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 17543312 17543623 17543461 Y NA NA NA NA NA NA TBC1D5 940686 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 17913596 17913897 17913750 Y NA NA NA NA NA NA TBC1D5 570412 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 18237686 18238028 18237782 Y TBC1D5 NA NA NA NA NA TBC1D5 246281 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 18580242 18580387 18580280 Y NA RAD23BP1 NA NA NA NA RAD23BP1 2077 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr3 19993428 19993925 19993635 Y KAT2B,RAB5A RAB5A NA NA NA NA RAB5A 6857 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 23709947 23710120 23710034 Y UBE2E1 NA UBE2E2,UBE2E1,NKIRAS1,RPL15 IMR90 Hi-C 24141950 UBE2E1 135274 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 23898490 23898770 23898565 Y NA NA NKIRAS1,RPL15 IMR90 Hi-C 24141950 UBE2E1 53096 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 25790563 25790933 25790768 Y NA OXSM,NGLY1 NA NA NA NA OXSM 31475 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 27448460 27448581 27448568 Y NA NA NEK10 IMR90 Hi-C 24141950 SLC4A7 75330 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 27524458 27524952 27524717 Y NA SLC4A7,RNU1-96P NA NA NA NA SLC4A7 547 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 27674607 27674970 27674793 Y NA AC098614.2 SLC4A7,NEK10 IMR90 Hi-C 24141950 AC098614.2 2140 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 27984483 27984771 27984759 Y ZCWPW2,EOMES NA NA NA NA NA EOMES 222277 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 28050894 28051260 28051082 Y EOMES,CMC1 NA NA NA NA NA CMC1 229815 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 28534381 28534544 28534465 Y ZCWPW2 NA NA NA NA NA AZI2 145763 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 29106794 29107135 29106965 Y NA NA RBMS3 IMR90 Hi-C 24141950 RBMS3 213338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 29568670 29568984 29568828 Y RBMS3 NA NA NA NA NA RBMS3 248197 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 31690891 31691368 31691073 Y ZNF860,OSBPL10 NA NA NA NA NA STT3B 118761 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 32549205 32549429 32549313 Y NA CMTM6 NA NA NA NA CMTM6 6305 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 33957693 33957878 33957786 Y NA NA NA NA NA NA PDCD6IP 119849 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 36953847 36954333 36954176 Y TRANK1,MLH1,LRRFIP2,GOLGA4,EPM2AIP1 TRANK1 NA NA NA NA TRANK1 30215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 37011455 37011827 37011685 Y LRRFIP2,ITGA9,GOLGA4,MLH1,MLH1,EPM2AIP1 TRANK1,EPM2AIP1,MLH1 NA NA NA NA EPM2AIP1 20968 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 37164159 37164535 37164493 Y NA NA MLH1 IMR90 Hi-C 24141950 LRRFIP2 58645 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 37901883 37902306 37902042 Y CTDSPL AC093415.2,CTDSPL NA NA NA NA CTDSPL 432 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 38209266 38209592 38209336 Y VILL,PLCD1,SLC22A14,ACAA1,MYD88,OXSR1 ACAA1,MYD88,OXSR1 NA NA NA NA OXSR1 4686 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 38216296 38216490 38216393 Y NA ACAA1,MYD88,OXSR1 NA NA NA NA OXSR1 11716 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 39192381 39192719 39192586 Y WDR48,CSRNP1 TTC21A,GORASP1,CSRNP1 NA NA NA NA CSRNP1 1334 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 44036592 44036799 44036686 Y NA NA NA NA NA NA ANO10 305506 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 44040259 44040834 44040651 Y NA NA ANO10 IMR90 Hi-C 24141950 ANO10 309173 CAGE HCC1806 hg19 FANTOM5 11.065984906437 chr3 44621262 44622718 44622436 Y NA ZNF197 NA NA NA NA ZNF197 1662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 45147419 45147607 45147508 Y TMEM158,CDCP1 CDCP1 NA NA NA NA CDCP1 38307 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 45157727 45158120 45157925 Y CDCP1 CDCP1,RPS24P8 NA NA NA NA CDCP1 27794 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 45175300 45175656 45175542 Y NA CDCP1,RPS24P8 NA NA NA NA CDCP1 10258 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 45209101 45209416 45209191 Y LIMD1 CDCP1,RPS24P8 LARS2,CDCP1,CLEC3B,TMEM158 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RPS24P8 9434 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 47203467 47203704 47203598 Y NA SETD2,KIF9-AS1 NA NA NA NA SETD2 10 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 47704557 47705253 47705047 Y SETD2 NA NA NA NA NA SMARCC1 116343 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 47898226 47898293 47898260 Y NA NA NA NA NA NA DHX30 55827 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 47991974 47992099 47992083 Y CCDC51,ATRIP,SMARCC1,CDC25A NA NA NA NA NA MAP4 136670 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 48860064 48860139 48860102 Y NA PRKAR2A-AS1,PRKAR2A NA NA NA NA PRKAR2A-AS1 22866 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 49105949 49106080 49106015 Y ARIH2 DALRD3,IMPDH2,QRICH1,QARS NA NA NA NA QRICH1 23716 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 50040739 50040850 50040788 Y SEMA3B NA NA NA NA NA RBM6 65299 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 52091161 52091675 52091445 Y TWF2,DUSP7 DUSP7 NA NA NA NA DUSP7 2595 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 52299133 52299501 52299437 Y NA RP5-1157M23.2,TWF2,PPM1M,GLYCTK,WDR82 NA NA NA NA GLYCTK 19604 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 53272912 53273168 53273085 Y TMEM110,PRKCD,DCP1A TKT NA NA NA NA TKT 14900 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 57960548 57960842 57960815 Y FLNB FLNB ARF4,FLNB IMR90 Hi-C 24141950 FLNB 31285 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 57963451 57963815 57963633 Y NA FLNB ARF4,FLNB IMR90 Hi-C 24141950 FLNB 28312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 59371498 59371574 59371525 Y NA NA FHIT IMR90 Hi-C 24141950 C3orf67 337688 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 59803830 59804011 59803964 Y NA NA NA NA NA NA C3orf67 770020 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 60715683 60716344 60716091 Y NA NA NA NA NA NA FHIT 518789 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 63848274 63848561 63848418 Y NA THOC7 NA NA NA NA THOC7 695 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 65694421 65694810 65694689 Y NA NA NA NA NA NA MAGI1 327699 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 69135158 69135511 69135504 Y NA TMF1,UBA3,ARL6IP5 NA NA NA NA ARL6IP5 3063 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 69797197 69797346 69797210 Y NA MITF NA NA NA NA MITF 10611 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 70175230 70175612 70175604 Y NA NA NA NA NA NA MITF 388644 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 71150221 71150629 71150383 Y NA NA NA NA NA NA FOXP1 480511 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 71465988 71466289 71466193 Y NA NA NA NA NA NA FOXP1 164851 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 71553174 71553740 71553492 Y EIF4E3 NA NA NA NA NA FOXP1 77400 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 71863099 71863325 71863212 Y NA NA NA NA NA NA EIF4E3 61175 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 73697614 73697785 73697708 Y NA NA NA NA NA NA CCDC75P1 467172 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 77632301 77632638 77632470 Y NA NA NA NA NA NA RP11-550F7.1 1151132 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 80100853 80101105 80100983 Y NA NA NA NA NA NA ROBO1 285888 CAGE HCC1806 hg19 FANTOM5 3.29625082319399 chr3 80630991 80631014 80631005 Y NA NA NA NA NA NA ROBO1 816026 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 80819406 80819881 80819642 Y NA NA NA NA NA NA GBE1 989431 CAGE HCC1806 hg19 FANTOM5 3.29625082319399 chr3 80820355 80820528 80820440 Y NA NA NA NA NA NA GBE1 988784 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 87101402 87101690 87101545 Y NA NA NA NA NA NA VGLL3 63133 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 88208920 88209337 88209164 Y CGGBP1,C3orf38 C3orf38,CGGBP1 NA NA NA NA CGGBP1 11885 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 88367245 88367614 88367269 Y NA ABCF2P1 NA NA NA NA ABCF2P1 2939 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 96336052 96336669 96336607 Y NA NA NA NA NA NA EPHA6 194756 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 98044011 98044208 98044126 Y NA NA GABRR3 IMR90 Hi-C 24141950 CLDND1 195702 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 98509261 98509585 98509483 Y NA NA NA NA NA NA DCBLD2 108948 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 98848000 98848317 98848116 Y DCBLD2 NA COL8A1,MIR548G IMR90 Hi-C 24141950 CTD-2021J15.1 228732 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 99555247 99555560 99555404 Y NA NA NA NA NA NA TBC1D23 422284 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 99579150 99579217 99579184 Y FILIP1L NA NA NA NA NA TBC1D23 398627 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 99579229 99579736 99579484 Y NA NA NA NA NA NA TBC1D23 398108 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 99582587 99582828 99582708 Y FILIP1L NA NA NA NA NA TBC1D23 395016 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 99596957 99597300 99597045 Y TBC1D23 NA NA NA NA NA TBC1D23 380544 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 99768992 99769102 99769071 Y C3orf26 NA NA NA NA NA TBC1D23 208742 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 100054250 100054545 100054496 Y NA NIT2 NA NA NA NA NIT2 2705 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 100077983 100078198 100078091 Y FILIP1L NIT2,LNP1,TOMM70A NA NA NA NA NIT2 26438 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 100244695 100244934 100244873 Y NA TMEM45A NA NA NA NA TMEM45A 35232 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 101146332 101146443 101146386 Y NA NA NA NA NA NA SENP7 83642 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 101403455 101403770 101403678 Y SENP7,RG9MTD1,PCNP,NFKBIZ,ZBTB11,RPL24 ZBTB11,CEP97 NA NA NA NA RPL24 0 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 101620912 101621401 101621096 Y NFKBIZ,NFKBIZ NA LOC152225 IMR90 Hi-C 24141950 NFKBIZ 76077 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 101645465 101645839 101645546 Y NA NA FAM55C,NFKBIZ,LOC152225 IMR90 Hi-C 24141950 NFKBIZ 100630 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 101843193 101843415 101843276 Y ZPLD1 NA FAM55C,LOC152225,NFKBIZ IMR90 Hi-C 24141950 NFKBIZ 298358 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 101875301 101875563 101875428 Y NA NA FAM55C,LOC152225,NFKBIZ IMR90 Hi-C 24141950 NFKBIZ 330466 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 101899188 101899342 101899284 Y NA NA FAM55C,LOC152225,NFKBIZ IMR90 Hi-C 24141950 NFKBIZ 354353 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 105087492 105087848 105087688 Y NA ALCAM NA NA NA NA ALCAM 3739 CAGE HCC1806 hg19 FANTOM5 4.23803677267798 chr3 105087916 105088171 105088021 Y ALCAM ALCAM NA NA NA NA ALCAM 4163 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 107504411 107504731 107504449 Y NA NA NA NA NA NA BBX 264628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 107803224 107803878 107803522 Y NA CD47 NA NA NA NA CD47 3994 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 107850030 107850463 107850156 Y MYH15,CD47 CD47 CD47,IFT57,MYH15 IMR90 Hi-C 24141950 CD47 42158 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 111449138 111449249 111449194 Y NA PHLDB2 NA NA NA NA PHLDB2 95 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 111456632 111456831 111456661 Y NA PHLDB2 NA NA NA NA PHLDB2 7288 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 111480028 111480653 111480348 Y NA PHLDB2 NA NA NA NA PHLDB2 30684 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 111481970 111482358 111482172 Y PHLDB2 PHLDB2 NA NA NA NA PHLDB2 32626 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 113473473 113473635 113473557 Y QTRTD1,KIAA2018,NAA50,ATP6V1A NAA50,ATP6V1A,RP11-271C24.2 NA NA NA NA RP11-271C24.2 9218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 115502758 115503253 115502970 Y NA NA NA NA NA NA ZBTB20 638640 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 115503263 115503751 115503546 Y NA NA NA NA NA NA ZBTB20 639145 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 117632292 117632433 117632362 Y NA NA NA NA NA NA PTMAP8 888747 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 118561016 118561389 118561159 Y NA NA NA NA NA NA UPK1B 328975 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 119142297 119142580 119142348 Y ARHGAP31,NR1I2,ADPRH TMEM39A,POGLUT1 NA NA NA NA TMEM39A 43097 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 119144576 119144994 119144966 Y ARHGAP31,COX17,ADPRH TMEM39A,POGLUT1 NA NA NA NA TMEM39A 40683 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 119147570 119147724 119147648 Y NA TMEM39A,POGLUT1 NA NA NA NA TMEM39A 37953 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 119809073 119809433 119809278 Y NA GSK3B,RP11-18H7.1 NA NA NA NA GSK3B 1831 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 120065370 120065692 120065535 Y NA LRRC58 NA NA NA NA LRRC58 494 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 120493479 120494008 120493729 Y NA GTF2E1,RABL3 NA NA NA NA RABL3 33639 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 121520314 121520680 121520641 Y NA IQCB1,EAF2 NA NA NA NA IQCB1 31246 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 121539764 121539854 121539811 Y NA IQCB1,EAF2 NA NA NA NA IQCB1 12072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 121550824 121551193 121550988 Y NA IQCB1,EAF2 NA NA NA NA IQCB1 733 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 121638049 121638246 121638101 Y CSTA,ILDR1 NA NA NA NA NA EAF2 86019 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr3 121664489 121664635 121664539 Y NA NA NA NA NA NA ILDR1 74416 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 123241172 123241525 123241376 Y NA NA NA NA NA NA PTPLB 60507 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 123304962 123305362 123305193 Y PTPLB PTPLB,MYLK-AS1 NA NA NA NA MYLK-AS1 2573 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 123351425 123351671 123351446 Y ADCY5 PTPLB,MYLK-AS1 NA NA NA NA MYLK-AS1 49036 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 123391718 123392030 123392015 Y ADCY5,MYLK NA NA NA NA NA MYLK-AS1 89329 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 125053590 125053890 125053754 Y NA NA NA NA NA NA SLC12A8 57569 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 125231315 125231583 125231558 Y NA SNX4 NA NA NA NA SNX4 5458 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 125709142 125709481 125709414 Y ZXDC,CCDC37 NA NA NA NA NA RP11-124N2.1 91582 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 126187165 126187389 126187309 Y ZXDC ZXDC NA NA NA NA ZXDC 5373 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 126630341 126630598 126630469 Y ZXDC NA NA NA NA NA CHCHD6 209278 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 126701397 126702091 126701497 Y PLXNA1 NA CHCHD6,PLXNA1 MCF7,K562 ChIA-PET 22265404 CHCHD6 280334 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 127404993 127405883 127405741 Y MGLL ABTB1 NA NA NA NA ABTB1 15215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 128216520 128216923 128216625 Y EEFSEC,DNAJB8,GATA2,GATA2,GATA2 RP11-475N22.4 GATA2,C3orf27,RUVBL1,EEFSEC,DNAJB8,DNAJB8-AS1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-475N22.4 10465 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 128267469 128267837 128267725 Y NA NA GATA2 K562 ChIA-PET 22265404 RP11-475N22.4 61414 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 128958880 128959235 128959095 Y H1FOO NA KIAA1257,CCDC48,GP9,ISY1-RAB43,CNBP,COPG1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CNBP 58115 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 129655699 129655849 129655774 Y NA TMCC1 TMCC1,TRH,IFT122,MBD4,LOC100507032 IMR90 Hi-C 24141950 TMCC1 45280 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 130073130 130073578 130073320 Y ATP2C1 NA NA NA NA NA ALG1L2 274456 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 130637982 130638444 130638066 Y NA NA NA NA NA NA ATP2C1 70543 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 134047160 134047394 134047241 Y ANAPC13,ANAPC13,ANAPC13,AMOTL2 RPL39P5,AMOTL2 NA NA NA NA RPL39P5 26009 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 134050159 134050571 134050486 Y AMOTL2 RPL39P5,AMOTL2 NA NA NA NA RPL39P5 22832 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 134051149 134051359 134051254 Y NA RPL39P5,AMOTL2 NA NA NA NA RPL39P5 22044 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 134053436 134053779 134053672 Y NA RPL39P5,AMOTL2 NA NA NA NA RPL39P5 19624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 136327517 136327655 136327647 Y NA NA NA NA NA NA STAG1 141565 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 136563637 136563997 136563817 Y NA RP11-85F14.5,NCK1 NA NA NA NA RP11-85F14.5 14899 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 138364761 138365360 138365102 Y PIK3CB,ARMC8 FAIM NA NA NA NA FAIM 39313 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 138581757 138582253 138582041 Y NA PIK3CB PIK3CB IMR90 Hi-C 24141950 PIK3CB 29977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 138582294 138582582 138582441 Y MRPS22 PIK3CB PIK3CB IMR90 Hi-C 24141950 PIK3CB 30514 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 139064285 139064552 139064299 Y NA COPB2,RP11-319G6.1 NA NA NA NA COPB2 42022 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 141217752 141218175 141217834 Y ATP1B3,RASA2 RASA2 NA NA NA NA RASA2 13863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 141230074 141230471 141230125 Y NA RASA2 NA NA NA NA RASA2 26185 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 141319185 141319480 141319327 Y RASA2 NA NA NA NA NA RASA2 115296 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 141610914 141611173 141610928 Y NA ATP1B3 NA NA NA NA ATP1B3 17948 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 141611491 141611772 141611584 Y NA ATP1B3 NA NA NA NA ATP1B3 18525 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 142164400 142165110 142164972 Y XRN1 RNU1-100P NA NA NA NA XRN1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 142585828 142586021 142585923 Y NA RP11-372E1.1,PCOLCE2 NA NA NA NA PCOLCE2 20024 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 142723898 142724007 142723903 Y NA U2SURP NA NA NA NA U2SURP 42559 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 143693787 143694146 143693885 Y C3orf58,C3orf58 C3orf58 NA NA NA NA C3orf58 5147 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 145416082 145416315 145416265 Y NA NA NA NA NA NA RPL21P39 124211 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 146745799 146745822 146745813 Y NA NA NA NA NA NA ZIC1 363387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 147016506 147016766 147016597 Y NA NA NA NA NA NA ZIC1 92443 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 147290616 147291014 147290824 Y NA NA NA NA NA NA ZIC4 167969 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 147663875 147664087 147663997 Y NA NA NA NA NA NA HNRNPA1P20 218998 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 148704982 148705163 148705084 Y NA GYG1 HLTF,GYG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GYG1 1965 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 149104739 149105065 149104981 Y COMMD2,TM4SF1 TM4SF1 GYG1,TM4SF18,TM4SF1,TM4SF4,WWTR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TM4SF1 11087 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr3 149119420 149119639 149119543 Y NA TM4SF1 WWTR1,ANKUB1 IMR90 Hi-C 24141950 TM4SF1 25768 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 149333585 149333911 149333859 Y TM4SF18,TM4SF18,TM4SF1,WWTR1,WWTR1 NA NA NA NA NA WWTR1 118590 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 149657313 149657850 149657694 Y TSC22D2,RNF13 ANKUB1 NA NA NA NA ANKUB1 26322 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 151486383 151486557 151486470 Y NA RP11-64D22.2 NA NA NA NA RP11-64D22.2 167 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 151993494 151994006 151993570 Y NA MBNL1 NA NA NA NA MBNL1 33877 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 152848416 152848799 152848521 Y RAP2B RAP2B NA NA NA NA RAP2B 29230 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 152856443 152856813 152856615 Y RAP2B RAP2B RAP2B MCF7 ChIA-PET 22265404 RAP2B 21216 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 152878171 152878732 152878352 Y P2RY1,RAP2B RAP2B NA NA NA NA RAP2B 142 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 154787580 154787808 154787649 Y NA NA NA NA NA NA PABPC1P10 237788 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 156252887 156253352 156253202 Y NA SSR3 NA NA NA NA SSR3 17621 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 156442773 156442811 156442792 Y TIPARP,TIPARP,TIPARP NA NA NA NA NA TIPARP-AS1 52606 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 156502026 156502257 156502105 Y SSR3 PA2G4P4,LINC00886,LEKR1 NA NA NA NA PA2G4P4 24264 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 156506058 156506346 156506123 Y SSR3 PA2G4P4,LINC00886,LEKR1 NA NA NA NA PA2G4P4 20175 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 156530301 156530778 156530576 Y TIPARP,TIPARP,TIPARP,CCNL1,LEKR1,LEKR1 PA2G4P4,LINC00886,LEKR1 NA NA NA NA LINC00886 2073 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 157935893 157935900 157935896 Y NA NA NA NA NA NA SHOX2 113601 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 159514256 159514624 159514440 Y NA NA NA NA NA NA IL12A 189913 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 159514645 159514911 159514780 Y NA NA NA NA NA NA IL12A 189626 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 159542121 159542517 159542198 Y NA NA NA NA NA NA IL12A 162020 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 159647586 159647883 159647684 Y NA NA IQCJ-SCHIP1,IL12A,IFT80,SMC4 IMR90 Hi-C 24141950 IL12A 56654 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 159745418 159745477 159745450 Y NA IL12A NA NA NA NA IL12A 40881 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 160949185 160949470 160949344 Y OTOL1 NA NA NA NA NA B3GALNT1 128013 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 161138601 161138921 161138632 Y NMD3,C3orf57 SPTSSB NMD3,PPM1L,B3GALNT1 MCF7 ChIA-PET 22265404 SPTSSB 49933 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 165215447 165215733 165215492 Y NA NA NA NA NA NA BCHE 337527 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 165215973 165216343 165216172 Y NA NA NA NA NA NA BCHE 336917 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 169172792 169172932 169172865 Y NA NA NA NA NA NA MECOM 206474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 170073991 170074311 170074218 Y SKIL,SKIL SKIL NA NA NA NA SKIL 525 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 170444418 170445820 170444586 Y CLDN11,CLDN11,RPL22L1,EIF5A2 RP11-373E16.4 CLDN11,SLC7A14,SKIL,PRKCI IMR90 Hi-C 24141950 RP11-373E16.4 11334 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr3 170627321 170627621 170627516 Y EIF5A2 RPL22L1,EIF5A2 NA NA NA NA EIF5A2 2839 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 171594447 171594730 171594655 Y NA NA NA NA NA NA PLD1 67707 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 171678764 171678932 171678818 Y NA NA PLD1,FNDC3B,TMEM212,TNIK IMR90 Hi-C 24141950 FNDC3B 76486 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 171948409 171948713 171948561 Y PLD1,FNDC3B NA NA NA NA NA FNDC3B 192991 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 172467147 172467552 172467259 Y NA NCEH1,ECT2,RNU4-4P NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 675 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 172510084 172510259 172510171 Y NA ECT2,RNU4-4P NA NA NA NA RNU4-4P 2089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 173580437 173580663 173580550 Y NLGN1 NA NA NA NA NA NLGN1 468363 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 174157357 174157932 174157609 Y NA NAALADL2 NAALADL2 IMR90 Hi-C 24141950 NAALADL2 2994 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 176862590 176862993 176862904 Y NA NA NA NA NA NA TBL1XR1 50268 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 176912879 176913389 176913098 Y NA NA NA NA NA NA TBL1XR1 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 177075253 177075542 177075439 Y NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 161992 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 177332842 177333173 177332964 Y NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 419581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 178978348 178978737 178978528 Y PIK3CA,MFN1,GNB4 LRRFIP1P1 NA NA NA NA LRRFIP1P1 1287 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 180122489 180122783 180122636 Y NA NA NA NA NA NA TTC14 195135 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 181418145 181418802 181418404 Y SOX2 NA NA NA NA NA DNAJC19 712583 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 182645862 182646115 182645990 Y MCF2L2,MCCC1 NA NA NA NA NA DCUN1D1 55626 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 182973152 182973434 182973425 Y ATP11B,KLHL6,KLHL24,B3GNT5 B3GNT5 NA NA NA NA B3GNT5 4120 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 182973593 182973879 182973736 Y ATP11B,KLHL6,KLHL24,B3GNT5 B3GNT5 NA NA NA NA B3GNT5 4561 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 183003579 183004143 183003750 Y ATP11B,B3GNT5,KLHL6,KLHL24 B3GNT5 NA NA NA NA B3GNT5 34547 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 185339016 185339200 185339107 Y NA SENP2,RP11-537I16.2 NA NA NA NA RP11-537I16.2 16653 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 185374091 185374577 185374335 Y NA NA NA NA NA NA RP11-537I16.2 51728 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 185825302 185825582 185825395 Y NA ETV5 NA NA NA NA ETV5 525 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 185948324 185948597 185948503 Y DGKG NA NA NA NA NA ETV5 122217 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 186926447 186926523 186926484 Y NA RPL39L NA NA NA NA RPL39L 29751 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 187467867 187468249 187468141 Y BCL6 BCL6 NA NA NA NA BCL6 6352 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 187901313 187901616 187901372 Y NA LPP,LPP-AS2 NA NA NA NA LPP-AS2 31468 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 187904912 187905263 187905013 Y BCL6,BCL6 LPP,LPP-AS2 NA NA NA NA LPP-AS2 35067 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 187980692 187981197 187980748 Y NA NA NA NA NA NA LPP-AS2 110847 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 188223633 188224028 188223838 Y NA NA NA NA NA NA LPP-AS2 353788 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 188324508 188324886 188324659 Y NA NA NA NA NA NA TPRG1 338117 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 188544921 188545335 188545082 Y NA NA NA NA NA NA TPRG1 117668 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189022377 189022942 189022424 Y NA NA NA NA NA NA TP63 324263 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189240469 189240487 189240479 Y TP63 NA NA NA NA NA TP63 106718 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189559377 189559697 189559485 Y CLDN1,TP63 NA NA NA NA NA TP63 212172 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 189569925 189569928 189569927 Y TP63 NA NA NA NA NA TP63 222720 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189618419 189618524 189618473 Y CLDN1,TP63 NA NA NA NA NA LEPREL1-AS1 218229 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189626513 189626760 189626607 Y TP63 NA NA NA NA NA LEPREL1-AS1 209993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189632708 189632930 189632825 Y TP63 NA NA NA NA NA LEPREL1-AS1 203823 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 189793562 189793947 189793945 Y LEPREL1 LEPREL1-AS1,LEPREL1 NA NA NA NA LEPREL1-AS1 42806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 190062904 190063381 190063085 Y LEPREL1,CLDN1,CLDN16 CLDN1 LEPREL1,CLDN1,CLDN16 IMR90 Hi-C 24141950 CLDN1 24640 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 190251387 190251779 190251471 Y CLDN1 IL1RAP NA NA NA NA IL1RAP 21547 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr3 192604773 192605048 192605023 Y NA MB21D2 NA NA NA NA MB21D2 28902 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 192610862 192611520 192611033 Y MB21D2 MB21D2 NA NA NA NA MB21D2 22430 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 192634153 192634990 192634777 Y MB21D2 MB21D2 NA NA NA NA MB21D2 203 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 192873675 192873788 192873739 Y NA NA NA NA NA NA HRASLS 83126 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 193548514 193548983 193548724 Y NA NA LOC100131551,LOC647323,HES1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OPA1 239581 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 193858651 193858843 193858731 Y NA HES1 NA NA NA NA HES1 6717 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 193876735 193877026 193876899 Y NA HES1 NA NA NA NA HES1 24801 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr3 194040514 194040910 194040840 Y HES1 NA NA NA NA NA ATP13A3 176183 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 194041526 194041906 194041553 Y HES1 NA NA NA NA NA ATP13A3 175187 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 194153543 194153935 194153911 Y ATP13A3 NA NA NA NA NA ATP13A3 63158 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 194227767 194228126 194227819 Y ATP13A3 ATP13A3 NA NA NA NA ATP13A3 10674 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 194247870 194248550 194248205 Y HES1,ATP13A3 ATP13A3 ATP13A3,GP5,TMEM44,FLJ34208 IMR90 Hi-C 24141950 ATP13A3 30777 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr3 194277383 194277706 194277514 Y NA TMEM44-AS1 ATP13A3,TMEM44,LRRC15,CPN2,FLJ34208,GP5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM44-AS1 25034 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 194435877 194435987 194435931 Y LSG1 LSG1,FAM43A NA NA NA NA FAM43A 31255 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 194461690 194461887 194461800 Y FAM43A NA NA NA NA NA FAM43A 57068 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr3 194561866 194562021 194561957 Y FAM43A NA LOC100507391,XXYLT1,ACAP2 IMR90 Hi-C 24141950 FAM43A 157244 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 195531239 195531516 195531404 Y NA MUC4 NA NA NA NA MUC4 5632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 195573980 195574341 195574135 Y MUC20,MUC4 MUC4 NA NA NA NA MUC4 36832 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 195632869 195633225 195632990 Y ACAP2,PPP1R2,PCYT1A,TNK2 TNK2 NA NA NA NA TNK2 3591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 195946209 195946432 195946330 Y UBXN7,RNF168,CEP19,TNK2,PCYT1A,ZDHHC19 NA NA NA NA NA PCYT1A 66396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 196064212 196064579 196064504 Y WDR53,ZDHHC19 TCTEX1D2,TM4SF19 NA NA NA NA TM4SF19 838 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr3 196255741 196255873 196255820 Y NA RNF168,FBXO45,WDR53 UBXN7,MUC20,RNF168,C3orf43,PCYT1A,TM4SF19-TCTEX1D2,WDR53,FBXO45,CEP19 IMR90 Hi-C 24141950 RNF168 27102 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 196437709 196437842 196437776 Y NA CEP19,PAK2 NA NA NA NA CEP19 545 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 196635737 196635948 196635847 Y UBXN7,RNF168,CEP19,PIGX,PAK2,SENP5 SENP5,NCBP2 NA NA NA NA NCBP2 31520 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr3 196757369 196757726 196757658 Y LRRC33,SENP5,MFI2,MFI2 AC011322.1,MFI2-AS1,MFI2 NA NA NA NA MFI2 2682 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 196784656 196784743 196784700 Y CEP19,PIGX,PAK2 MFI2 NA NA NA NA MFI2 29969 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 196948967 196949228 196949097 Y NA NA MFI2 IMR90 Hi-C 24141950 DLG1 74943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 197254564 197254715 197254640 Y NA BDH1 NA NA NA NA BDH1 43479 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 197264445 197264691 197264611 Y NA BDH1 NA NA NA NA BDH1 33503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr3 197439165 197439566 197439302 Y IQCG,LRCH3,KIAA0226 MIR922,FYTTD1,KIAA0226 NA NA NA NA FYTTD1 22484 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 693278 693552 693364 Y GAK,MFSD7,PCGF3 MYL5,ATP5I,PCGF3 NA NA NA NA PCGF3 3985 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 1966776 1967112 1967086 Y WHSC1,WHSC1 SCARNA22 NA NA NA NA SCARNA22 7251 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 3484611 3485071 3484896 Y NA LRPAP1 NA NA NA NA LRPAP1 47215 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 3485407 3485559 3485410 Y DOK7 LRPAP1 NA NA NA NA LRPAP1 46727 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 4542716 4543043 4542880 Y ZBTB49,STX18 STX18-AS1,STX18 NA NA NA NA STX18 643 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 7123698 7124022 7123956 Y NA NA ABLIM2,SORCS2,GRPEL1 IMR90 Hi-C 24141950 GRPEL1 55774 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 7833117 7833393 7833178 Y AFAP1 NA NA NA NA NA AFAP1-AS1 79300 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 7834057 7834311 7834184 Y AFAP1 NA NA NA NA NA AFAP1-AS1 80240 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 7962509 7962775 7962724 Y NA AFAP1 NA NA NA NA AFAP1 22856 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 8614691 8614733 8614712 Y NA CPZ NA NA NA NA CPZ 22304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 9154755 9155069 9154900 Y NA NA NA NA NA NA HMX1 283212 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 9605717 9605843 9605777 Y NA NA NA NA NA NA SLC2A9 448717 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 10053251 10053319 10053285 Y NA SLC2A9 NA NA NA NA SLC2A9 1241 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 11428604 11428950 11428674 Y NA HS3ST1 NA NA NA NA HS3ST1 439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 11473418 11473587 11473515 Y NA HS3ST1 CLNK IMR90 Hi-C 24141950 HS3ST1 44029 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 11603431 11603452 11603441 Y NA NA NA NA NA NA HS3ST1 174042 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 13623241 13623510 13623376 Y NA AC006445.7 NA NA NA NA AC006445.7 8713 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 15870539 15870889 15870715 Y FBXL5,CD38 NA NA NA NA NA FGFBP1 67474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 15907638 15908044 15907859 Y FBXL5,BST1,FGFBP1 FGFBP1 BST1 IMR90 Hi-C 24141950 FGFBP1 30319 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 19572039 19572379 19572208 Y NA NA NA NA NA NA RP11-3J1.1 115422 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 22636233 22636363 22636286 Y NA NA NA NA NA NA CDC42P6 91210 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 24599702 24600087 24599863 Y NA DHX15 SOD3,CCDC149 IMR90 Hi-C 24141950 DHX15 15529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 25402341 25402497 25402460 Y NA ANAPC4 NA NA NA NA ANAPC4 25506 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 26289394 26289659 26289610 Y RBPJ,RBPJ NA RBPJ IMR90 Hi-C 24141950 RBPJ 126317 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 28621646 28621809 28621725 Y NA NA NA NA NA NA RP11-123O22.1 186575 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 30718904 30719447 30718947 Y PCDH7,PCDH7 PCDH7 NA NA NA NA PCDH7 590 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 35022631 35023155 35023089 Y NA NA NA NA NA NA ARAP2 1220976 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 36183139 36183486 36183313 Y NA NA NA NA NA NA ARAP2 60645 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 37074925 37075290 37075112 Y NA NA NA NA NA NA C4orf19 378273 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 38525630 38525737 38525685 Y NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 138080 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 38674773 38675062 38674906 Y KLF3 KLF3 NA NA NA NA KLF3 10956 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 38735219 38735515 38735398 Y NA NA KLF3,TBC1D1,FLJ13197 IMR90 Hi-C 24141950 KLF3 71402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 38857753 38857899 38857797 Y KLF3,TLR1,TLR6 TLR1,TLR6,FAM114A1 NA NA NA NA TLR1,TLR6 1315 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 38859134 38859762 38859410 Y KLF3,KLHL5,TLR1,TLR6 TLR1,TLR6,FAM114A1 NA NA NA NA TLR1,TLR6 2696 CAGE HCC1806 hg19 FANTOM5 5.41526920953298 chr4 39045588 39045914 39045752 Y NA TMEM156,KLHL5 NA NA NA NA KLHL5 929 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 39913580 39913628 39913604 Y NA NA NA NA NA NA PDS5A 63948 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 40240312 40240963 40240621 Y RHOH,RBM47 NA NA NA NA NA N4BP2 183866 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 40533771 40533999 40533881 Y NA NA NA NA NA NA RBM47 96893 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 40578690 40579499 40579160 Y RBM47 NA NA NA NA NA RBM47 51393 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 40628320 40628499 40628391 Y NA RBM47 NA NA NA NA RBM47 2393 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 40674929 40675349 40675137 Y RBM47 RBM47 RBM47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM47 44037 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 40765283 40765623 40765452 Y RBM47 NSUN7 NA NA NA NA NSUN7 15369 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 40791893 40792102 40791997 Y NSUN7 NSUN7 NA NA NA NA NSUN7 41979 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 40910052 40910602 40910542 Y NA NA NA NA NA NA NSUN7 160138 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 40997224 40997582 40997567 Y NA NA NA NA NA NA APBB2 219149 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 41936193 41936441 41936268 Y TMEM33 TMEM33 NA NA NA NA TMEM33 1056 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr4 42333546 42333678 42333612 Y NA NA ATP8A1 IMR90 Hi-C 24141950 SHISA3 64178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 48840387 48840419 48840403 Y NA OCIAD1 NA NA NA NA OCIAD1 35158 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 54338842 54339193 54339023 Y NA NA NA NA NA NA FIP1L1 97032 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 54794044 54794386 54794192 Y NA NA SCFD2,PDGFRA,CHIC2,FIP1L1,LNX1,RPL21P44,GSX2 IMR90 Hi-C 24141950 CHIC2 134471 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 54929171 54929915 54929573 Y CHIC2 CHIC2 NA NA NA NA CHIC2 314 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 55525734 55526788 55525801 Y NA KIT NA NA NA NA KIT 3649 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 57278248 57278433 57278373 Y NA AASDH,PPAT,PAICS NA NA NA NA PPAT 21348 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 66899965 66900079 66900021 Y NA NA NA NA NA NA RP11-396M11.1 57765 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 66960590 66960760 66960693 Y NA RP11-396M11.1 NA NA NA NA RP11-396M11.1 2746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 67430351 67431255 67431078 Y NA NA NA NA NA NA RP11-396M11.1 472507 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 68394565 68394648 68394607 Y NA NA NA NA NA NA RP11-584P21.4 84580 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 68538149 68538306 68538215 Y NA UBA6,UBA6-AS1 NA NA NA NA UBA6 26591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 71695000 71695080 71695041 Y NA GRSF1 NA NA NA NA GRSF1 8582 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 73887463 73887489 73887476 Y NA COX18 ADAMTS3 IMR90 Hi-C 24141950 COX18 45983 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 74055104 74055142 74055123 Y ANKRD17,ALB,AFM NA NA NA NA NA ANKRD17 67373 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 74549349 74549563 74549470 Y MTHFD2L,IL8,CXCL3,CXCL2 NA CXCL5,IL8,CXCL6,CXCL3,CXCL2 IMR90 Hi-C 24141950 IL8 54660 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 74881912 74882135 74882023 Y IL8,MTHFD2L,EREG,CXCL3,CXCL2 CXCL3 NA NA NA NA CXCL3 20389 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 74977575 74978125 74977847 Y NA CXCL2 RASSF6 IMR90 Hi-C 24141950 MTHFD2L 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 77133814 77134170 77133987 Y NAAA,CXCL10,CXCL11 SCARB2,FAM47E NA NA NA NA FAM47E 621 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 77380282 77380659 77380469 Y NA NA NA NA NA NA FAM47E 247089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 78823537 78823752 78823560 Y NA MRPL1 NA NA NA NA MRPL1 41863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 78842671 78842943 78842808 Y NA NA NA NA NA NA MRPL1 60997 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 79083838 79083918 79083865 Y NA NA NA NA NA NA FRAS1 107114 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 79473983 79474151 79474067 Y ANXA3 ANXA3 NA NA NA NA ANXA3 3310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 84491178 84491513 84491320 Y COQ2,HPSE,HPSE,HPSE,HELQ,AGPAT9 FAM175A,AGPAT9 NA NA NA NA AGPAT9 36111 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 85420434 85420908 85420714 Y NA NA NA NA NA NA CDS1 81224 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 85868944 85869302 85869263 Y NA WDFY3-AS2,WDFY3 NA NA NA NA WDFY3-AS2 16236 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 86398698 86399017 86398859 Y NA ARHGAP24 NA NA NA NA ARHGAP24 4431 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 87766035 87766280 87766137 Y SLC10A6 SLC10A6 NA NA NA NA SLC10A6 2136 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 87880821 87880990 87880863 Y NA AFF1,C4orf36,TECRP1 NA NA NA NA TECRP1 11545 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 87894121 87894618 87894307 Y NA AFF1,C4orf36,TECRP1 NA NA NA NA TECRP1 24845 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 88408034 88408084 88408060 Y SPARCL1 NA NA NA NA NA NUDT9 66300 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 89922113 89922454 89922284 Y NA NA NA NA NA NA FAM13A 108095 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 91453996 91454262 91454133 Y NA NA NA NA NA NA SNCA 696530 CAGE HCC1806 hg19 FANTOM5 6.35705515901697 chr4 92381693 92381784 92381739 Y NA NA NA NA NA NA SNCA 1624227 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 95373822 95374139 95373960 Y PDLIM5 PDLIM5 NA NA NA NA PDLIM5 2785 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 95469761 95469962 95469859 Y HPGDS,PDLIM5 NA NA NA NA NA PDLIM5 98724 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 99827146 99827610 99827384 Y NA EIF4E NA NA NA NA EIF4E 22178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 100325584 100326020 100325850 Y ADH5,ADH4,ADH6,ADH1A,ADH1B,ADH1C ADH7 NA NA NA NA ADH7 28874 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 100738800 100739047 100738840 Y NA DAPP1 NA NA NA NA DAPP1 2810 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 100772280 100772608 100772341 Y NA DAPP1,LAMTOR3 NA NA NA NA DAPP1 36290 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 100861794 100861850 100861822 Y NA LAMTOR3,DNAJB14,RP11-15B17.1,H2AFZ NA NA NA NA DNAJB14 4033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 101977991 101978172 101977999 Y NA NA NA NA NA NA AP001816.1 288765 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 103439850 103440607 103440211 Y SLC39A8,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA,NFKB1 NFKB1 NA NA NA NA NFKB1 19364 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 103483964 103484649 103484311 Y NHEDC1,SLC39A8,SLC39A8,SLC39A8,SLC39A8,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA,NFKB1 NA NA NA NA NA NFKB1 63478 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 103485535 103485935 103485588 Y NHEDC1,SLC39A8,SLC39A8,SLC39A8,SLC39A8,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA,NFKB1 NA NA NA NA NA NFKB1 65049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 103541931 103542312 103542286 Y NA NA NA NA NA NA NFKB1 121445 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 103673229 103673433 103673315 Y NHEDC1,NFKB1,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA MANBA NA NA NA NA MANBA 6718 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 106071010 106071297 106071196 Y TET2,TET2 TET2 NA NA NA NA TET2 5978 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 106628155 106628490 106628322 Y NA GSTCD NA NA NA NA GSTCD 220 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 108783895 108784172 108784033 Y SGMS2 SGMS2 NA NA NA NA SGMS2 40176 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 111117471 111117868 111117585 Y NA ELOVL6 NA NA NA NA ELOVL6 487 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 113181018 113181306 113181029 Y AP1AR,TIFA AP1AR,ALPK1,TIFA NA NA NA NA ALPK1 23359 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 114355245 114355627 114355568 Y NA RNU1-138P NA NA NA NA RNU1-138P 15766 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr4 114367129 114367387 114367298 Y NA RNU1-138P NA NA NA NA RNU1-138P 27650 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 117519495 117520605 117520296 Y NA ACTN4P1 NA NA NA NA ACTN4P1 2178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 121010657 121011025 121010845 Y NA MAD2L1 NDNF IMR90 Hi-C 24141950 MAD2L1 24428 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 122611926 122612330 122612120 Y ANXA5 ANXA5 NA NA NA NA ANXA5 3938 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 125634465 125634726 125634691 Y NA ANKRD50 NA NA NA NA ANKRD50 2578 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 127699482 127699754 127699681 Y NA NA FAT4 IMR90 Hi-C 24141950 INTU 842672 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 128752654 128753022 128752839 Y HSPA4L PLK4 NA NA NA NA PLK4 46994 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 129244135 129244496 129244419 Y NA PGRMC2 PGRMC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PGRMC2 36151 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 129847015 129847068 129847042 Y NA NA NA NA NA NA C4orf33 165404 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 129965980 129966229 129966106 Y NA C4orf33,SCLT1 NA NA NA NA C4orf33 46243 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 133266182 133266225 133266204 Y NA NA NA NA NA NA RP11-9G1.3 802046 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 135287127 135287346 135287189 Y NA RP11-400D2.2 NA NA NA NA RP11-400D2.2 40499 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 139177153 139177364 139177274 Y SLC7A11 SLC7A11 SLC7A11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC7A11 15650 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr4 139182736 139183009 139182873 Y SLC7A11 SLC7A11 SLC7A11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC7A11 21233 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 139960939 139961173 139961057 Y NAA15,CCRN4L CCRN4L NA NA NA NA CCRN4L 25996 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 140003738 140004448 140004114 Y CCRN4L,RAB33B,ELF2,ELF2 NA CCRN4L K562 ChIA-PET 22265404 CCRN4L 68795 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 140667675 140667827 140667711 Y MAML3 NA NA NA NA NA MGST2 82753 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 140696118 140696274 140696196 Y NA NA NA NA NA NA MGST2 111196 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr4 141012548 141012827 141012747 Y MAML3 NA NA NA NA NA MAML3 60511 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 145956046 145956369 145956259 Y NA NA NA NA NA NA ABCE1 60715 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 146726845 146727018 146726937 Y NA NA NA NA NA NA ZNF827 130769 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 151873741 151873900 151873783 Y NA NA NA NA NA NA LRBA 60979 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 152406480 152406763 152406721 Y NA NA NA NA NA NA FAM160A1 78112 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 154127038 154127322 154127172 Y NA NA NA NA NA NA TRIM2 55544 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 157811355 157811573 157811537 Y NA NA NA NA NA NA PDGFC 78973 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 157863056 157863372 157863345 Y PDGFC PDGFC NA NA NA NA PDGFC 27174 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 157868046 157868334 157868214 Y NA PDGFC NA NA NA NA PDGFC 22212 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 157870715 157871133 157870964 Y NA PDGFC NA NA NA NA PDGFC 19413 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 159103850 159104073 159103996 Y NA FAM198B,TMEM144 NA NA NA NA FAM198B 11380 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 159731152 159732543 159732097 Y PPID,RAPGEF2,FNIP2 FNIP2 NA NA NA NA FNIP2 42862 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 161769764 161769816 161769790 Y NA NA NA NA NA NA FNIP2 2081474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 165210734 165210789 165210744 Y NA NA NA NA NA NA NACA3P 651653 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 169644236 169644423 169644322 Y NA NA NA NA NA NA DDX60L 187299 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 169839395 169839702 169839549 Y NA NA NA NA NA NA CBR4 89724 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 169992046 169992220 169992129 Y NA NA SH3RF1,NEK1 IMR90 Hi-C 24141950 CBR4 62620 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 170026437 170026753 170026620 Y NA NA NA NA NA NA CBR4 97011 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 170030173 170030283 170030178 Y NA NA NA NA NA NA CBR4 100747 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 170172551 170172946 170172870 Y NA SH3RF1 NA NA NA NA SH3RF1 17310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 174112816 174113032 174112924 Y NA GALNT7,RP11-10K16.1 NA NA NA NA RP11-10K16.1 24013 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 175490531 175490775 175490626 Y HPGD HPGD NA NA NA NA HPGD 48226 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 177575311 177575346 177575322 Y SPATA4 NA NA NA NA NA VEGFC 136535 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 177710943 177711419 177711262 Y VEGFC VEGFC NA NA NA NA VEGFC 462 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 178362238 178362457 178362307 Y NA AGA,RP11-130F10.1 NA NA NA NA AGA 581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 179336968 179337246 179337206 Y NA NA NA NA NA NA RP11-130F10.1 972835 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 179487975 179488371 179488173 Y NA NA NA NA NA NA RP11-130F10.1 1123842 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 182049601 182049894 182049748 Y NA NA NA NA NA NA DCTD 1787195 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 184270914 184271169 184271084 Y NA NA CLDN24,CLDN22 IMR90 Hi-C 24141950 CDKN2AIP 92575 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr4 184328356 184328744 184328447 Y CDKN2AIP CDKN2AIP WWC2,ODZ3,C4orf38,CLDN24,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 35000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 184643961 184644129 184644061 Y NA NA NA NA NA NA TRAPPC11 65541 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 184888585 184888733 184888700 Y STOX2 NA NA NA NA NA TRAPPC11 310165 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 185201876 185202105 185201989 Y IRF2 NA IRF2,CCDC111,MLF1IP,LOC728175,CASP3 IMR90 Hi-C 24141950 IRF2 191629 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 185205400 185205552 185205478 Y NA NA IRF2,CCDC111,MLF1IP,LOC728175,CASP3 IMR90 Hi-C 24141950 IRF2 188182 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 186227102 186227608 186227442 Y NA NA NA NA NA NA LRP2BP 87445 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 186650716 186651019 186650922 Y SORBS2 NA NA NA NA NA PDLIM3 195950 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 186730607 186731122 186730955 Y NA NA NA NA NA NA TLR3 257184 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 187543398 187543695 187543547 Y NA NA NA NA NA NA FAT1 102181 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 187597728 187597911 187597833 Y NA FAT1 NA NA NA NA FAT1 47965 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 187648916 187649309 187649113 Y NA FAT1 FAT1 MCF7 ChIA-PET 22265404 FAT1 3040 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 187680620 187680766 187680713 Y NA FAT1 LOC339975,FAT1 IMR90 Hi-C 24141950 FAT1 34744 CAGE HCC1806 hg19 FANTOM5 8.24062705798497 chr4 187762182 187762435 187762391 Y NA RP11-11N5.1 FAT1,LOC339975 IMR90 Hi-C 24141950 RP11-11N5.1 47688 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 187834148 187834163 187834155 Y NA RP11-11N5.1 FAT1,LOC339975 IMR90 Hi-C 24141950 RP11-11N5.1 24025 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 190197516 190197817 190197669 Y NA NA NA NA NA NA HSP90AA4P 194302 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 190285262 190285611 190285472 Y NA NA NA NA NA NA HSP90AA4P 106508 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr4 190489859 190490580 190490206 Y FRG1 NA NA NA NA NA HSP90AA4P 97740 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr4 190936592 190936699 190936668 Y NA NA NA NA NA NA FRG1 76649 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr4 190942271 190942591 190942322 Y NA NA NA NA NA NA FRG1 82328 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr5 53990 54174 54063 Y PLEKHG4B,C5orf55 CTD-2231H16.1 LRRC14B,CCDC127,PLEKHG4B,SDHA IMR90 Hi-C 24141950 CTD-2231H16.1 36092 CAGE HCC1806 hg19 FANTOM5 4.23803677267798 chr5 148457 148511 148484 Y NA PLEKHG4B NA NA NA NA PLEKHG4B 10084 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 175502 175522 175512 Y NA PLEKHG4B,CCDC127,SDHA NA NA NA NA PLEKHG4B 37129 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 325619 325847 325735 Y NA AHRR NA NA NA NA AHRR 23328 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 366173 366499 366337 Y NA NA NA NA NA NA AHRR 63882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 544264 544432 544333 Y NA NA NA NA NA NA CEP72 65955 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 672237 672545 672500 Y EXOC3,CEP72 TPPP NA NA NA NA TPPP 18965 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 672861 673336 673024 Y NA TPPP NA NA NA NA TPPP 18174 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr5 692381 692722 692686 Y TPPP TPPP NA NA NA NA TPPP 871 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 784651 785023 784908 Y ZDHHC11,TPPP NA NA NA NA NA TPPP 93141 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr5 1536479 1536809 1536604 Y SLC12A7,LPCAT1 LPCAT1 SLC6A3 IMR90 Hi-C 24141950 LPCAT1 14387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 1725421 1725568 1725519 Y NA NA MIR4277 IMR90 Hi-C 24141950 MRPL36 73912 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr5 2750184 2750594 2750355 Y C5orf38,IRX2 IRX2 NA NA NA NA C5orf38 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 2758153 2758545 2758351 Y NA C5orf38,IRX2 NA NA NA NA IRX2 7184 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 5026027 5026363 5026168 Y NA NA NA NA NA NA ADAMTS16 112080 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 5423578 5423857 5423693 Y KIAA0947 KIAA0947 NA NA NA NA KIAA0947 4801 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 6712873 6713977 6713364 Y NA NA NA NA NA NA RP11-332J15.3 50027 CAGE HCC1806 hg19 FANTOM5 10.359645444324 chr5 10309087 10309259 10309181 Y NA CMBL,MARCH6 NA NA NA NA CMBL 2949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 10352620 10352938 10352732 Y NA CMBL,MARCH6 NA NA NA NA MARCH6 805 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 10371627 10371888 10371758 Y NA MARCH6 NA NA NA NA MARCH6 19812 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 10422961 10423316 10423021 Y NA ROPN1L NA NA NA NA ROPN1L 16320 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr5 10601684 10601853 10601839 Y ANKRD33B ANKRD33B NA NA NA NA ANKRD33B 39242 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 11328840 11329134 11329023 Y NA NA NA NA NA NA DAP 569456 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 12314219 12314247 12314235 Y NA NA NA NA NA NA DAP 1554835 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 14037218 14037324 14037271 Y NA NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAH5 94566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 14037561 14037744 14037653 Y NA NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAH5 94909 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 14039774 14040034 14039980 Y NA NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAH5 97122 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 14108761 14108933 14108800 Y TRIO TRIO TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIO 32878 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 14264855 14265210 14264930 Y TRIO NA NA NA NA NA TRIO 123044 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 14639692 14640047 14639871 Y NA EEF1A1P13,FAM105B TRIO,FAM105A IMR90 Hi-C 24141950 EEF1A1P13 11391 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 16492574 16492683 16492630 Y FAM134B ZNF622 NA NA NA NA ZNF622 28673 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 16698370 16698703 16698671 Y NA NA NA NA NA NA FAM134B 83203 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 16715199 16715528 16715435 Y NA NA NA NA NA NA FAM134B 100032 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr5 16733521 16733894 16733888 Y NA NA NA NA NA NA FAM134B 118354 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 16736297 16736738 16736539 Y NA NA NA NA NA NA FAM134B 121130 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 16894604 16895174 16894829 Y NA CTB-55B8.1,MYO10 NA NA NA NA CTB-55B8.1 5576 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 16898106 16898497 16898302 Y MYO10 CTB-55B8.1,MYO10 NA NA NA NA CTB-55B8.1 2253 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 17118695 17119132 17119047 Y BASP1 NA NA NA NA NA BASP1 54988 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 17184758 17185051 17184904 Y BASP1 NA NA NA NA NA BASP1 121051 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 18697987 18698184 18698066 Y NA CTD-2023M8.1 NA NA NA NA CTD-2023M8.1 46098 CAGE HCC1806 hg19 FANTOM5 6.35705515901697 chr5 18698353 18698759 18698423 Y NA CTD-2023M8.1 NA NA NA NA CTD-2023M8.1 45523 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 19288299 19288682 19288500 Y NA NA NA NA NA NA RP11-124N3.3 147844 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr5 20447344 20447494 20447490 Y CDH18 NA NA NA NA NA CDH18 126488 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 21392233 21392585 21392409 Y NA NA NA NA NA NA GUSBP1 52291 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 24579271 24579548 24579410 Y CDH10 NA NA NA NA NA CDH10 63539 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 25443137 25443499 25443483 Y NA NA NA NA NA NA RP11-549K20.1 254372 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 25649889 25649971 25649941 Y NA NA NA NA NA NA RP11-549K20.1 461124 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 25910581 25911176 25910785 Y NA NA NA NA NA NA RP11-549K20.1 721816 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr5 26847119 26847280 26847167 Y NA NA NA NA NA NA RP11-549K20.1 1658354 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 27309667 27310060 27309866 Y NA NA NA NA NA NA RP11-549K20.1 2120902 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 31459519 31459540 31459530 Y NA NA NA NA NA NA DROSHA 70763 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 33442170 33442454 33442303 Y NA CTD-2203K17.1,TARS NA NA NA NA TARS 3368 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 34585438 34585952 34585758 Y RAI14,RAI14 NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 68390 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 34586139 34586737 34586416 Y NA NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 67605 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 36151218 36151404 36151252 Y C5orf33,C5orf33,SKP2,LMBRD2 LMBRD2,SKP2 NA NA NA NA SKP2 1127 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 36174356 36174616 36174412 Y SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2 LMBRD2,SKP2 NA NA NA NA SKP2 24265 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 37029618 37029862 37029736 Y NA NA NA NA NA NA NIPBL 154757 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 38446340 38446486 38446390 Y EGFLAM NA NA NA NA NA LIFR 159970 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 38650799 38651230 38651069 Y NA LIFR EGFLAM,LIFR,OSMR IMR90 Hi-C 24141950 LIFR 44343 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 38660472 38660667 38660594 Y LIFR NA EGFLAM,LIFR IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LIFR 54016 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 39072904 39073873 39073587 Y FYB,RICTOR RICTOR NA NA NA NA RICTOR 394 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 39716547 39716931 39716737 Y NA NA TTC33,PTGER4 IMR90 Hi-C 24141950 DAB2 256145 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 40263385 40263650 40263545 Y NA NA PTGER4,TTC33 IMR90 Hi-C 24141950 PTGER4 413950 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 41845041 41845055 41845050 Y OXCT1,FBXO4 OXCT1 NA NA NA NA OXCT1 23566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 42468582 42468751 42468671 Y NA GHR NA NA NA NA GHR 46703 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 42949793 42950117 42950048 Y ZNF131,C5orf39 NA LOC648987,LOC153684 IMR90 Hi-C 24141950 SEPP1 64299 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 43007637 43008177 43007831 Y NA CTD-2035E11.3,AC025171.1 NA NA NA NA CTD-2035E11.3 8354 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 43020158 43020617 43020275 Y C5orf28,ZNF131,C5orf39 CTD-2035E11.3,AC025171.1,ZNF131,CTD-2201E18.3 NA NA NA NA CTD-2035E11.3 3627 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 43034859 43034967 43034962 Y NA CTD-2035E11.3,AC025171.1,ZNF131,CTD-2201E18.3 LOC648987 MCF7 ChIA-PET 22265404 AC025171.1 4710 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr5 43061828 43062062 43061945 Y NA CTD-2035E11.3,AC025171.1,ZNF131,CTD-2201E18.3 NA NA NA NA ZNF131 1216 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 49660016 49660402 49660209 Y NA NA NA NA NA NA EMB 76680 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 50522243 50522486 50522368 Y NA NA NA NA NA NA ISL1 154435 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 51177794 51178091 51177943 Y NA NA NA NA NA NA ISL1 500873 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 52332019 52332357 52332083 Y FST,ITGA2 ITGA2 NA NA NA NA ITGA2 48863 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 52619379 52619641 52619531 Y ITGA2,FST NA ARL15 IMR90 Hi-C 24141950 FST 154598 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 53848607 53848967 53848787 Y NA SNX18 NA NA NA NA SNX18 37018 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 54722913 54723133 54723024 Y SKIV2L2 NA NA NA NA NA RNF138P1 101396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 54729958 54730125 54730050 Y SKIV2L2,DDX4 NA NA NA NA NA RNF138P1 94404 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 54731133 54731267 54731160 Y NA NA NA NA NA NA RNF138P1 93262 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 54791399 54791640 54791617 Y NA RNF138P1,PPAP2A NA NA NA NA RNF138P1 32889 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 55289605 55289989 55289924 Y IL6ST IL6ST NA NA NA NA IL6ST 784 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 55471391 55471677 55471521 Y IL6ST NA NA NA NA NA IL6ST 182570 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 57111915 57112364 57112128 Y ACTBL2 NA PLK2 IMR90 Hi-C 24141950 PLK2 641723 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 57133445 57133721 57133581 Y NA NA PLK2 IMR90 Hi-C 24141950 PLK2 620366 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 57158264 57158637 57158547 Y NA NA PLK2 IMR90 Hi-C 24141950 PLK2 595450 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 57537303 57537570 57537449 Y NA NA PLK2 IMR90 Hi-C 24141950 PLK2 216517 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 58232883 58233370 58233101 Y PDE4D NA NA NA NA NA PLK2 478796 CAGE HCC1806 hg19 FANTOM5 3.29625082319399 chr5 58423311 58423752 58423511 Y NA NA NA NA NA NA PLK2 669224 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 59045613 59045932 59045792 Y PDE4D NA NA NA NA NA PART1 735608 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 60597691 60598057 60597813 Y NA ZSWIM6 ZSWIM6,C5orf43 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZSWIM6 28043 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 60625710 60626179 60625844 Y ELOVL7,ZSWIM6 NA ZSWIM6 MCF7 ChIA-PET 22265404 ZSWIM6 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 60626321 60626538 60626370 Y ZSWIM6 ZSWIM6 NA NA NA NA ZSWIM6 221 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 60629089 60629454 60629159 Y NA ZSWIM6 NA NA NA NA ZSWIM6 2989 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 60629701 60630027 60629731 Y ZSWIM6 ZSWIM6 NA NA NA NA ZSWIM6 3601 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 64062074 64062237 64062149 Y NA SREK1IP1,CWC27 NA NA NA NA SREK1IP1 275 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 64331292 64332267 64331637 Y NA NA NA NA NA NA CWC27 268535 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 64796548 64796879 64796719 Y PPWD1,CENPK NA NA NA NA NA CENPK 60119 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 66178568 66178972 66178612 Y NA NA NA NA NA NA MAST4-AS1 118809 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 68338463 68338878 68338699 Y NA CTC-498J12.1,SLC30A5 NA NA NA NA CTC-498J12.1 815 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr5 70938164 70938422 70938252 Y NA NA NA NA NA NA MCCC2 57049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 71218510 71218673 71218589 Y NA NA NA NA NA NA MCCC2 337395 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 72138720 72138932 72138785 Y TNPO1 TNPO1 NA NA NA NA TNPO1 28581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 72950370 72950710 72950420 Y RGNEF NA NA NA NA NA ANKRA2 90859 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 73002983 73003378 73003181 Y NA NA NA NA NA NA ANKRA2 143472 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 73162116 73162205 73162161 Y NA NA NA NA NA NA ANKRA2 302605 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 73330710 73331077 73330894 Y NA NA FAM169A,ENC1 IMR90 Hi-C 24141950 ANKRA2 471199 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 73611863 73612159 73611974 Y NA NA RGNEF,ENC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEXB 321689 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 73612322 73612454 73612340 Y NA NA RGNEF,ENC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEXB 321394 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 76086514 76086772 76086643 Y F2R F2RL1 NCRUPAR,F2R,IQGAP2 IMR90 Hi-C 24141950 F2RL1 25986 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 77581141 77581448 77581332 Y AP3B1 AP3B1 NA NA NA NA AP3B1 7131 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 77803150 77803526 77803443 Y AP3B1,LHFPL2,ARSB NA NA NA NA NA SCAMP1 148811 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 77819717 77819752 77819740 Y NA NA NA NA NA NA SCAMP1 165378 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 77890894 77891278 77891114 Y LHFPL2 NA NA NA NA NA LHFPL2 172566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 77940704 77941073 77940964 Y NA NA NA NA NA NA LHFPL2 122771 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 78843882 78844075 78843988 Y NA HOMER1 THBS4,BHMT2,HOMER1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HOMER1 35842 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 79458255 79458620 79458438 Y MSH3,SERINC5 NA NA NA NA NA SERINC5 91278 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 81045433 81045821 81045530 Y NA NA NA NA NA NA SSBP2 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 81147637 81148063 81147790 Y NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP2 102021 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 82453115 82453241 82453191 Y TMEM167A,XRCC4,VCAN NA NA NA NA NA TMEM167A 81433 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 82886397 82886761 82886578 Y VCAN NA NA NA NA NA TMEM167A 514715 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 85654132 85654483 85654435 Y NA NA NA NA NA NA COX7C 257238 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 85789046 85789185 85789116 Y NA NA NA NA NA NA COX7C 122536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 86629389 86629577 86629451 Y NA NA NA NA NA NA RASA1 67684 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 86663167 86663443 86663248 Y NA CCNH NA NA NA NA CCNH 43393 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 88171082 88171456 88171409 Y MEF2C MEF2C NA NA NA NA MEF2C 26466 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 88219671 88220042 88220001 Y NA MEF2C NA NA NA NA MEF2C 21749 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 90662566 90662573 90662570 Y NA ARRDC3 NA NA NA NA ARRDC3 14603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 90680524 90680637 90680608 Y ARRDC3 ARRDC3 NA NA NA NA ARRDC3 3348 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 93256507 93256894 93256879 Y NA NA NA NA NA NA FAM172A 188510 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 95048086 95048445 95048385 Y NA RHOBTB3,CTD-2154I11.2 RHOBTB3,ARSK,SPATA9,RFESD IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RHOBTB3 860 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 95113820 95114121 95113969 Y NA CTD-2154I11.2,GLRX NA NA NA NA GLRX 42588 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 95170754 95171173 95170855 Y GLRX,ELL2 GLRX RHOBTB3,GLRX,ARSK,RFESD,SPATA9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLRX 14045 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr5 95227563 95227763 95227704 Y NA NA NA NA NA NA CTD-2337A12.1 67942 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 95240158 95240487 95240414 Y NA NA NA NA NA NA CTD-2337A12.1 55218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 95294794 95295285 95294896 Y ELL2 CTD-2337A12.1,ELL2 NA NA NA NA CTD-2337A12.1 420 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 95295681 95296335 95296056 Y ELL2 NA NA NA NA NA CTD-2337A12.1,ELL2 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 96159684 96160037 96159828 Y CAST,CAST ERAP1,ERAP2 CAST,RIOK2,ERAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ERAP1 17881 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 99387251 99388845 99388529 Y NA NA NA NA NA NA CTD-2001C12.1 480121 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 100113377 100113868 100113542 Y ST8SIA4,ST8SIA4 NA NA NA NA NA ST8SIA4 123102 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 105733568 105733839 105733591 Y NA NA EFNA5 IMR90 Hi-C 24141950 EFNA5 1270757 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 106725486 106725757 106725607 Y NA NA NA NA NA NA EFNA5 278839 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 106823409 106823505 106823457 Y NA NA NA NA NA NA EFNA5 181091 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 106862612 106863005 106862809 Y NA NA NA NA NA NA EFNA5 141591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 108137615 108137706 108137661 Y NA NA NA NA NA NA FER 56092 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 108791627 108791782 108791705 Y NA PJA2 PJA2 IMR90 Hi-C 24141950 PJA2 47932 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 111742657 111742758 111742708 Y NA EPB41L4A NA NA NA NA EPB41L4A 10255 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 112218687 112219263 112218745 Y APC SRP19,REEP5 NA NA NA NA SRP19 23768 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 112219334 112219897 112219506 Y NA SRP19,REEP5 NA NA NA NA SRP19 24415 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 112242412 112242755 112242610 Y NA SRP19,REEP5 NA NA NA NA REEP5 13481 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 112383528 112383665 112383560 Y DCP2,YTHDC2 NA NA NA NA NA DCP2 73129 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 112425460 112425614 112425558 Y NA NA NA NA NA NA DCP2 115061 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 114726097 114726311 114726134 Y NA NA NA NA NA NA CCDC112 95569 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 114848957 114849251 114849109 Y NA FEM1C NA NA NA NA FEM1C 29340 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 114913600 114913827 114913746 Y NA FEM1C,AC010226.4,TMED7-TICAM2,TICAM2 NA NA NA NA AC010226.4 21927 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 115236990 115237113 115237051 Y NA NA NA NA NA NA AQPEP 59038 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 115276815 115277206 115277011 Y LOC644100 AQPEP NA NA NA NA AQPEP 18945 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 115346892 115346904 115346897 Y AQPEP CTD-2287O16.1 NA NA NA NA CTD-2287O16.1 39082 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 118670685 118671156 118670901 Y TNFAIP8 NA NA NA NA NA TNFAIP8 68298 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 120609806 120610048 120609927 Y NA NA NA NA NA NA SRFBP1 685608 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 121133445 121133465 121133461 Y NA NA NA NA NA NA SRFBP1 162191 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 123738017 123738276 123738143 Y NA NA NA NA NA NA RP11-436H11.1 404650 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr5 125704201 125704675 125704554 Y C5orf48 GRAMD3 NA NA NA NA GRAMD3 10377 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 126478879 126479210 126479043 Y NA NA NA NA NA NA C5orf63 71695 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 126847905 126848122 126848004 Y NA PRRC1 PRRC1 K562,MCF7 ChIA-PET 22265404 PRRC1 3179 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 131595834 131595951 131595900 Y KIF3A,PDLIM4 PDLIM4,P4HA2 NA NA NA NA PDLIM4 4470 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 131601385 131601782 131601639 Y P4HA2 PDLIM4,P4HA2 NA NA NA NA PDLIM4 10021 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 131833993 131834254 131834119 Y AFF4,SLC22A4,IRF1 AC116366.6,IRF1 IRF1 IMR90 Hi-C 24141950 IRF1 9503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 132323487 132323535 132323508 Y NA AFF4,AC010240.3,ZCCHC10 NA NA NA NA AC010240.3 1685 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr5 132792857 132792990 132792924 Y NA NA NA NA NA NA HSPA4 407203 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 133435759 133436442 133436277 Y PPP2CA,PHF15,CDKL3,TCF7,TCF7 TCF7 TCF7,SKP1 IMR90 Hi-C 24141950 TCF7 11960 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 133540709 133541017 133540863 Y NA SKP1,MIR3661,PPP2CA NA NA NA NA MIR3661 18431 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 133562679 133563046 133562870 Y NA MIR3661,PPP2CA NA NA NA NA PPP2CA 2846 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 133863130 133863560 133863438 Y NA AC005355.2 NA NA NA NA AC005355.2 22887 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 134259128 134259903 134259220 Y NA PCBD2,CTB-36O1.7,MTND6P4,MTND5P11,MTND4P12 NA NA NA NA MTND5P11 246 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 134261311 134262635 134261858 Y NA PCBD2,CTB-36O1.7,MTND6P4,MTND5P11 NA NA NA NA MTND4P12 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 134733668 134734080 134733976 Y H2AFY H2AFY NA NA NA NA H2AFY 64 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 137785775 137785891 137785836 Y WNT8A,NME5,LRRTM2,REEP2 REEP2,EGR1 NA NA NA NA REEP2 13069 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 137799770 137800154 137799916 Y FAM13B,FAM53C,KDM3B,EGR1 REEP2,EGR1 NA NA NA NA EGR1 591 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 137800317 137800564 137800421 Y FAM13B,FAM53C,KDM3B,ETF1,EGR1 REEP2,EGR1 NA NA NA NA EGR1 1138 CAGE HCC1806 hg19 FANTOM5 4.70892974741998 chr5 137868208 137868538 137868536 Y FAM13B,FAM53C,KDM3B,ETF1 ETF1,HSPA9 NA NA NA NA ETF1 8451 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 137870529 137870619 137870574 Y FAM53C,KDM3B,ETF1 ETF1,HSPA9 NA NA NA NA ETF1 6370 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 138127302 138127500 138127374 Y NA NA NA NA NA NA CTNNA1 182646 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 138620359 138620541 138620439 Y UBE2D2,MATR3 MATR3,SIL1 NA NA NA NA SIL1 6705 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 138965572 138965797 138965632 Y NA NA NA NA NA NA CXXC5 59087 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 139636160 139636260 139636251 Y SRA1 PFDN1 NA NA NA NA PFDN1 44446 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 139638984 139639383 139639269 Y C5orf32,ZMAT2,SRA1,IK,HARS2,APBB3,ANKHD1 PFDN1 NA NA NA NA PFDN1 41323 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 139652898 139653497 139653234 Y SRA1,SLC35A4,HBEGF,CD14,CD14,APBB3,ANKHD1 PFDN1 NA NA NA NA PFDN1 27209 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 139724210 139724515 139724457 Y SRA1,CD14,CD14,APBB3,HBEGF,ANKHD1 PFDN1 NA NA NA NA HBEGF 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 139782360 139782578 139782471 Y NA ANKHD1,ANKHD1-EIF4EBP3 NA NA NA NA ANKHD1-EIF4EBP3 2867 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 140420005 140420137 140420073 Y NA NA PCDHA1 MCF7 ChIA-PET 22265404 PCDHB6 107546 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 140457576 140457668 140457630 Y NA NA NA NA NA NA PCDHB6 70015 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 140983787 140984197 140984031 Y PCDH12,KIAA0141,ARAP3,DIAPH1 DIAPH1,HDAC3,RELL2,FCHSD1 NA NA NA NA DIAPH1 12425 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 140985133 140985553 140985464 Y TAF7,PCDH12,KIAA0141,ARAP3,DIAPH1 DIAPH1,HDAC3,RELL2,FCHSD1 NA NA NA NA DIAPH1 11069 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 141151294 141151412 141151353 Y NA NA LOC729080,KIAA0141 IMR90 Hi-C 24141950 ARAP3 91506 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 141256552 141256862 141256814 Y PCDHGA9,PCDHGB6,PCDHGC4,PCDHGC5,RELL2,NDFIP1,PCDH1 KIAA0141 NA NA NA NA PCDH1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 141395225 141395941 141395831 Y DIAPH1,KIAA0141,PCDH12,GNPDA1 GNPDA1 GNPDA1,NDFIP1 IMR90 Hi-C 24141950 GNPDA1 4619 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 142315332 142315934 142315386 Y NR3C1,NR3C1,ARHGAP26 NA NA NA NA NA ARHGAP26 167383 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 142362111 142362403 142362189 Y NA NA NA NA NA NA ARHGAP26 214162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 142623562 142623962 142623719 Y NA NA NA NA NA NA RPL7P21 86208 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 142785420 142785784 142785543 Y NR3C1 NR3C1 ARHGAP26 IMR90 Hi-C 24141950 NR3C1 27293 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 142956241 142956608 142956394 Y NR3C1,NR3C1 NA HMHB1,NR3C1,ARHGAP26 IMR90 Hi-C 24141950 NR3C1 143164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 145808290 145808429 145808360 Y POU4F3 TCERG1 NA NA NA NA TCERG1 16445 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 147463828 147464105 147463998 Y NA NA NA NA NA NA SPINK5 60582 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 147605275 147606051 147605859 Y NA NA NA NA NA NA RP11-373N22.3 155295 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 148349939 148350092 148350025 Y NA NA NA NA NA NA SH3TC2 90634 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr5 148352583 148352893 148352766 Y ADRB2 NA NA NA NA NA SH3TC2 87833 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 148505231 148505419 148505389 Y NA ABLIM3 ADRB2,AFAP1L1,ABLIM3,SH3TC2 IMR90 Hi-C 24141950 ABLIM3 13627 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 148869266 148869383 148869317 Y NA NA NA NA NA NA CSNK1A1 59624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 149110531 149110757 149110649 Y PPARGC1B PPARGC1B NA NA NA NA PPARGC1B 2670 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 149110836 149111455 149111198 Y ARHGEF37,SLC26A2,CDX1,PPARGC1B PPARGC1B NA NA NA NA PPARGC1B 2975 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 149261958 149262272 149262115 Y NA NA NA NA NA NA SLC26A2 76028 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 149945724 149945760 149945742 Y SYNPO,ZNF300 SYNPO NA NA NA NA SYNPO 32882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150086779 150087134 150086956 Y RBM22,DCTN4,DCTN4 RBM22,DCTN4 MYOZ3,RBM22 IMR90 Hi-C 24141950 RBM22 8110 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150379028 150379237 150379195 Y SYNPO,RBM22,TNIP1 GPX3 ANXA6,C5orf62,ZNF300,ZNF300P1,TNIP1 IMR90 Hi-C 24141950 GPX3 18887 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150401918 150402484 150402308 Y GPX3,TNIP1 GPX3 NA NA NA NA GPX3 3794 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150403932 150404163 150404140 Y NA GPX3 NA NA NA NA GPX3 5808 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150455023 150455538 150455407 Y RBM22,DCTN4,DCTN4,SLC36A1,CCDC69,TNIP1 TNIP1 NA NA NA NA TNIP1 15600 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150464543 150466084 150465220 Y RBM22,DCTN4,DCTN4,SLC36A1,CCDC69,TNIP1 TNIP1 NA NA NA NA TNIP1 5054 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150474739 150475397 150475230 Y RBM22,DCTN4,DCTN4,C5orf62,TNIP1,SLC36A1,CCDC69 TNIP1 NA NA NA NA TNIP1 3601 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 150637373 150638284 150637416 Y NA GM2A,CCDC69 NA NA NA NA CCDC69 35667 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 151088912 151089056 151088970 Y SLC36A3 NA NA NA NA NA RP11-54C4.1 54883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 154871450 154872048 154871744 Y KIF4B NA NA NA NA NA MRPL22 552820 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 159592617 159593055 159592885 Y NA PWWP2A,FABP6 TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FABP6 19319 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 159637065 159637397 159637293 Y FABP6 FABP6,RP11-34P1.2 NA NA NA NA FABP6 24691 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 159951614 159951766 159951649 Y FABP6 NA NA NA NA NA PTTG1 104785 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 167126470 167126930 167126675 Y NA NA NA NA NA NA WWC1 589726 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 169404223 169404546 169404350 Y FAM196B FAM196B NA NA NA NA FAM196B 1198 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 169733349 169733836 169733608 Y NA NA LCP2,KCNIP1,C5orf58 IMR90 Hi-C 24141950 C5orf58 75898 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 169742286 169742596 169742454 Y LCP2,KCNMB1 NA LCP2,KCNIP1 IMR90 Hi-C 24141950 C5orf58 84835 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 170662332 170662346 170662338 Y NA NA NA NA NA NA TLX3 71942 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 170878093 170878163 170878150 Y NA FGF18 NA NA NA NA FGF18 33433 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 171094849 171095086 171094946 Y NA NA FBXW11,FGF18 IMR90 Hi-C 24141950 FGF18 250189 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 171577546 171577959 171577717 Y STK10 STK10 NA NA NA NA STK10 35431 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 171602273 171602685 171602548 Y STK10 STK10 NA NA NA NA STK10 10705 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 171681735 171682053 171681977 Y NA UBTD2 NA NA NA NA UBTD2 27022 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 171788471 171789086 171788773 Y DUSP1,STK10,UBTD2 NA NA NA NA NA UBTD2 79396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 171847636 171847998 171847816 Y NA SH3PXD2B NA NA NA NA SH3PXD2B 31529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 172160417 172160946 172160788 Y ATP6V0E1 DUSP1 ERGIC1,ATP6V0E1,C5orf41,DUSP1,NEURL1B,BNIP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP1 35252 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 172167900 172168183 172168030 Y UBTD2,DUSP1 DUSP1 ERGIC1,DUSP1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP1 28015 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 172198749 172199959 172199636 Y UBTD2,ERGIC1,C5orf41,DUSP1 DUSP1 NA NA NA NA DUSP1 2551 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 172234136 172234644 172234380 Y NA DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ERGIC1 24634 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 172304783 172305546 172305102 Y DUSP1,C5orf41 ERGIC1 NA NA NA NA ERGIC1 45505 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 172880266 172880558 172880434 Y NA NA LOC285593,STC2,BOD1,CPEB4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STC2 125760 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 172882283 172882785 172882503 Y NA NA LOC285593,STC2,BOD1,NKX2-5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STC2 127777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 173846140 173846257 173846227 Y NA NA MSX2,MIR4634 IMR90 Hi-C 24141950 MSX2 303279 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 176790168 176790403 176790363 Y DOK3,RGS14 LMAN2,RGS14,GRK6 NA NA NA NA RGS14 7330 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 177645477 177646261 177645593 Y NA HNRNPAB NA NA NA NA HNRNPAB 15969 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 177647239 177647603 177647383 Y CLK4,AGXT2L2 HNRNPAB NA NA NA NA HNRNPAB 17731 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 178259703 178260206 178260005 Y ZNF879 ZNF354B,RNU1-39P ZNF879,AGXT2L2,GRM6,COL23A1 IMR90 Hi-C 24141950 ZNF354B 24748 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 178985972 178986151 178986083 Y NA RUFY1 NA NA NA NA RUFY1 10413 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 179188972 179189165 179189138 Y NA MAML1,SQSTM1,MGAT4B NA NA NA NA MAML1 31121 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 179465387 179465429 179465409 Y MAML1,MGAT4B,RNF130 RNF130 NA NA NA NA RNF130 31689 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 179512347 179512479 179512439 Y MAML1,LTC4S RNF130 NA NA NA NA RNF130 15229 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 180396070 180396284 180396178 Y NA NA NA NA NA NA ZFP62 109784 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 180600516 180600767 180600667 Y NA CTC-338M12.5,TRIM7,TRIM41 NA NA NA NA CTC-338M12.5 16157 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr5 180615428 180615595 180615512 Y NA CTC-338M12.5,TRIM7,TRIM41 NA NA NA NA CTC-338M12.5 1329 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr5 180616521 180617006 180616799 Y ZFP62,TRIM52,TRIM41 TRIM7,TRIM41 NA NA NA NA CTC-338M12.5 0 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 472688 472701 472695 Y HUS1B,EXOC2 NA NA NA NA NA DUSP22 183058 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 542839 543066 543064 Y NA NA NA NA NA NA EXOC2 148051 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 710742 711015 710979 Y HUS1B EXOC2 NA NA NA NA EXOC2 19625 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 711154 711526 711478 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 20037 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr6 1055850 1056126 1055989 Y FOXQ1 NA NA NA NA NA FOXQ1 254549 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 1250840 1251149 1250977 Y NA NA EXOC2,LOC285768 IMR90 Hi-C 24141950 FOXQ1 59526 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 1311143 1311466 1311342 Y NA FOXQ1 NA NA NA NA FOXQ1 468 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr6 1311552 1311897 1311757 Y NA FOXQ1 NA NA NA NA FOXQ1 877 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 1702305 1702315 1702310 Y NA NA NA NA NA NA FOXC1 93624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 2377151 2377429 2377354 Y NA NA NA NA NA NA GMDS-AS1 133169 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 2763251 2763536 2763387 Y NA WRNIP1 NA NA NA NA WRNIP1 112 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 2818084 2818421 2818253 Y SERPINB9 SERPINB1 NA NA NA NA SERPINB1 21819 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 3069574 3070273 3069674 Y NA HTATSF1P2,RIPK1,BPHL LOC100507194,WRNIP1 K562 ChIA-PET 22265404 RIPK1 7349 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 3177072 3177481 3177192 Y NA TUBB2A NA NA NA NA TUBB2A 21312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 3254273 3254642 3254472 Y SLC22A23 PSMG4,TUBB2B NA NA NA NA TUBB2B 24309 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 4189159 4189278 4189216 Y C6orf201,C6orf146 NA CDYL IMR90 Hi-C 24141950 ECI2 55328 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 4317088 4317563 4317434 Y CDYL NA RPP40,CDYL,LYRM4 IMR90 Hi-C 24141950 ECI2 183257 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 4990656 4990905 4990781 Y NA RPP40 NA NA NA NA RPP40 11392 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 5179288 5179492 5179391 Y NA NA NA NA NA NA LYRM4 79680 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 5997075 5997523 5997169 Y NRN1 NRN1 NA NA NA NA NRN1 7677 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 6008887 6009261 6009138 Y NRN1 NRN1 NA NA NA NA NRN1 3687 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 6678540 6678781 6678655 Y NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 427049 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 6687140 6687567 6687361 Y NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 418263 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 6750084 6750462 6750414 Y LY86,RREB1,RREB1 NA RREB1,SSR1 IMR90 Hi-C 24141950 RREB1 355368 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 6803868 6804205 6804018 Y RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 301625 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 6851413 6851674 6851488 Y NA NA RREB1 IMR90 Hi-C 24141950 RREB1 254156 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 7618671 7618993 7618833 Y NA SNRNP48 NA NA NA NA SNRNP48 30239 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 7673327 7673604 7673437 Y NA NA MUTED-TXNDC5,BMP6 IMR90 Hi-C 24141950 BMP6 51426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 10355646 10355875 10355765 Y NA NA NA NA NA NA TFAP2A 62017 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr6 10403752 10404250 10404030 Y TMEM14C,TMEM14B,PAK1IP1,C6orf52,TFAP2A,TFAP2A,TFAP2A TFAP2A,LINC00518 NA NA NA NA TFAP2A 13642 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 10407698 10407754 10407725 Y PAK1IP1,C6orf52,TFAP2A,TFAP2A TFAP2A,LINC00518 NA NA NA NA TFAP2A 10138 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 10441526 10441791 10441655 Y TMEM14C,TMEM14B,PAK1IP1,GCNT2,TFAP2A,TFAP2A,TFAP2A TFAP2A,LINC00518,GCNT2 NA NA NA NA LINC00518 8419 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 10552532 10552740 10552636 Y NA NA NA NA NA NA GCNT2 62076 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 10587786 10588136 10587948 Y TMEM14B,GCNT2 NA NA NA NA NA GCNT2 97330 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 10771427 10771996 10771700 Y ELOVL2,MAK TMEM14B,SYCP2L NA NA NA NA SYCP2L 25400 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 10970926 10971179 10971053 Y NA NA NA NA NA NA MAK 134162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 11316345 11316699 11316437 Y TMEM170B,NEDD9,NEDD9 NA NA NA NA NA NEDD9 63882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 11318376 11319012 11318732 Y TMEM170B,MAK,LOC221710,NEDD9,NEDD9 NA NA NA NA NA NEDD9 61569 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 11344526 11344935 11344784 Y TMEM170B,NEDD9 NEDD9 NA NA NA NA NEDD9 35646 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 11357622 11357891 11357774 Y NA NEDD9 NA NA NA NA NEDD9 22690 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 11414036 11414330 11414188 Y TMEM170B,LOC221710,NEDD9 NEDD9 NEDD9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NEDD9 33455 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 11921182 11921467 11921322 Y NA NA ADTRP,HIVEP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-456H18.2 84436 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 12242168 12242480 12242308 Y HIVEP1,EDN1 EDN1 TMEM170B,ADTRP,HIVEP1 IMR90 Hi-C 24141950 EDN1 46116 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 12287477 12287842 12287503 Y NA EDN1 TMEM170B,ADTRP,HIVEP1 IMR90 Hi-C 24141950 EDN1 754 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 12288026 12288260 12288136 Y NA EDN1 NA NA NA NA EDN1 336 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 12288471 12288892 12288524 Y NA NA NA NA NA NA EDN1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 12315136 12315383 12315260 Y NA EDN1 NA NA NA NA EDN1 26540 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 12328741 12329205 12329092 Y NA EDN1 EDN1 MCF7 ChIA-PET 22265404 EDN1 40145 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 12577591 12578036 12577836 Y NA NA EDN1,TMEM170B IMR90 Hi-C 24141950 RPL15P3 65249 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 13383914 13384048 13383981 Y TBC1D7,GFOD1,GFOD1,GFOD1 NA NA NA NA NA TBC1D7 57099 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 13602068 13602103 13602086 Y NA SIRT5,NOL7 NA NA NA NA NOL7 11456 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 13630387 13630831 13630754 Y NA NOL7 NA NA NA NA NOL7 16828 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 13766479 13766874 13766549 Y NA NA NA NA NA NA RANBP9 56683 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 14211061 14211714 14211398 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD83 95189 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 14211875 14212265 14212161 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD83 96003 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 14728163 14728500 14728264 Y NA NA DTNBP1,JARID2 IMR90 Hi-C 24141950 JARID2 516027 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 14733801 14734229 14733883 Y NA NA DTNBP1,JARID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 510298 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 14744083 14744613 14744392 Y NA NA JARID2 IMR90 Hi-C 24141950 JARID2 499914 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 14837546 14837947 14837747 Y NA NA JARID2 IMR90 Hi-C 24141950 JARID2 406580 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 15066743 15067555 15067031 Y NA NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 176972 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 15097391 15097615 15097495 Y NA NA JARID2 IMR90 Hi-C 24141950 JARID2 146912 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 15299924 15300312 15299931 Y NA NA NA NA NA NA JARID2-AS1 53059 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 15365610 15365867 15365688 Y JARID2,DTNBP1 NA NA NA NA NA JARID2-AS1 118745 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 16495109 16495178 16495163 Y NA NA NA NA NA NA GMPR 258298 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 16668776 16668955 16668866 Y NA NA NA NA NA NA RP1-151F17.1 90414 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 16684094 16684384 16684208 Y ATXN1 NA NA NA NA NA RP1-151F17.1 74985 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 17614611 17614952 17614695 Y KIF13A,NUP153,FAM8A1 FAM8A1 NA NA NA NA FAM8A1 16025 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 17729455 17729796 17729624 Y NA NUP153 NUP153 K562 ChIA-PET 22265404 NUP153 24799 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 17864491 17864751 17864619 Y NA NA NA NA NA NA KIF13A 121103 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 18016545 18016825 18016604 Y NA KIF13A TPMT,NHLRC1 IMR90 Hi-C 24141950 KIF13A 30691 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 18308493 18308879 18308567 Y NA DEK RNF144B IMR90 Hi-C 24141950 DEK 45439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 18353568 18353841 18353735 Y RNF144B RNF144B NA NA NA NA RNF144B 12938 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 18370927 18371512 18371225 Y NA RNF144B RNF144B MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNF144B 4148 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 18407685 18408142 18407784 Y RNF144B RNF144B NA NA NA NA RNF144B 40906 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 18503772 18504216 18504116 Y NA NA RNF144B,DEK IMR90 Hi-C 24141950 RNF144B 136993 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 19448405 19448469 19448461 Y NA NA NA NA NA NA RP4-625H18.2 354514 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 20206748 20206864 20206806 Y MBOAT1 MBOAT1 NA NA NA NA MBOAT1 3806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 20239005 20239080 20239045 Y NA MBOAT1 MBOAT1 IMR90 Hi-C 24141950 MBOAT1 28335 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 20604004 20604027 20604016 Y NA NA NA NA NA NA CDKAL1 71316 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 20868773 20869042 20868908 Y NA NA NA NA NA NA CDKAL1 336085 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 21141154 21141340 21141254 Y NA NA NA NA NA NA SOX4 450632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 21947021 21947287 21947156 Y NA NA NA NA NA NA SOX4 355049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 24799813 24800204 24799968 Y DCDC2,GPLD1,GPLD1,ALDH5A1 GMNN NA NA NA NA GMNN 26654 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 24996712 24997040 24996893 Y TDP2 PPIAP29 FAM65B IMR90 Hi-C 24141950 PPIAP29 22065 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 25992254 25993073 25992840 Y NA TRIM38,HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2 NA NA NA NA HIST1H1A 22967 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr6 26016753 26016987 26016816 Y HIST1H1A HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C NA NA NA NA HIST1H1A 713 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 26025834 26026125 26026038 Y BTN2A1,BTN2A1,TRIM38 HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C NA NA NA NA HIST1H4B 354 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 26026306 26026795 26026679 Y HIST1H1D,BTN3A3,BTN3A2,BTN3A2,BTN3A1,HIST1H2BD,HIST1H1E,TRIM38,HIST1H3A HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C NA NA NA NA HIST1H4B 826 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 26029019 26029363 26029242 Y NA HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C NA NA NA NA HIST1H3B 925 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 26126352 26126787 26126533 Y HIST1H4H,HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H2AE,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1C,HIST1H2AC,HIST1H4E,HIST1H1E HFE,HIST1H4C,HIST1H1T,HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD NA NA NA NA HIST1H2AC 3979 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr6 26283996 26284379 26284279 Y NA HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H3G,HIST1H2APS4,HIST1H2BI,HIST1H4H NA NA NA NA HIST1H4H 234 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 26304989 26305345 26305268 Y NA HIST1H3G,HIST1H2APS4,HIST1H2BI,HIST1H4H HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIST1H4H 21227 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 26521444 26521777 26521577 Y NA HCG11,HMGN4 NA NA NA NA HCG11 1368 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27145585 27145720 27145705 Y FKSG83,ZNF184,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH HIST1H2BJ,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,RP11-209A2.1 HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-209A2.1 31303 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 27145729 27146130 27146023 Y ZNF184 HIST1H2BJ,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,RP11-209A2.1 HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-209A2.1 30893 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27205361 27205470 27205416 Y NA RP11-209A2.1 OR2B2,LOC100131289,ZNF184 IMR90 Hi-C 24141950 RP11-209A2.1 28338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27446506 27447382 27447356 Y NA ZNF184 ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF184 7609 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr6 27513313 27513537 27513433 Y NA NA HIST1H2AH,HIST1H2BK,MIR3143,HIST1H2AM,HIST1H3J,HIST1H2BO IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF184 74416 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27637197 27637397 27637297 Y OR2B6,OR2B2 NA ZNF391,PRSS16 IMR90 Hi-C 24141950 HIST1H2BL 136312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27637652 27637706 27637685 Y NA NA ZNF391,PRSS16 IMR90 Hi-C 24141950 HIST1H2BL 136003 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27706104 27706357 27706299 Y NA NA NA NA NA NA HIST1H2BL 67352 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr6 27720726 27720895 27720796 Y NA NA HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,HIST1H2AH,MIR3143,LOC100131289 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HIST1H2BL 52814 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27780866 27781094 27780996 Y ZNF184,HIST1H4L,HIST1H4K,HIST1H4J,HIST1H3J,HIST1H3I,HIST1H2BO,HIST1H2BN,HIST1H2AM,HIST1H2AL,HIST1H2AK,HIST1H1B,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2BM,HIST1H2AJ HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2BPS2,HIST1H2AL NA NA NA NA HIST1H2BM 44 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 27807310 27807672 27807617 Y ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H4L,HIST1H3J,HIST1H3I,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H1B HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2BPS2,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L NA NA NA NA HIST1H2BN 2987 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr6 27862895 27863061 27863012 Y ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,ZKSCAN4,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO HIST1H2BPS2,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO NA NA NA NA HIST1H2BO 3692 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 28072476 28072872 28072543 Y HIST1H4K,HIST1H2AK,ZNF165,ZSCAN16,ZNF192 ZNF165,ZSCAN16 NA NA NA NA ZSCAN16 17466 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 28302002 28302386 28302196 Y NA ZKSCAN3 NA NA NA NA ZKSCAN3 13305 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 28457225 28458028 28457315 Y NA ZSCAN23,COX11P1 NA NA NA NA COX11P1 44475 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr6 28956602 28956848 28956725 Y NA HCG15,ZNF311 NA NA NA NA HCG15 4622 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 29932777 29932958 29932802 Y HLA-F,TRIM10,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,HLA-A HLA-K,HLA-A,HLA-J NA NA NA NA HLA-A 25740 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 30068638 30068845 30068662 Y NA ZNRD1,ZNRD1-AS1,PPP1R11,RNF39,TRIM31 NA NA NA NA TRIM31 10038 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr6 30069810 30070038 30069951 Y HLA-E,ABCF1,HLA-F,LOC554223,HLA-G,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,RNF39,RNF39 ZNRD1,ZNRD1-AS1,PPP1R11,RNF39,TRIM31 NA NA NA NA TRIM31 8845 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 30175844 30176213 30176153 Y NA TRIM26,HLA-L NA NA NA NA TRIM26 2991 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 30276337 30276699 30276532 Y ATAT1,ATAT1 TRIM39,HCG18,RPP21 NA NA NA NA TRIM39 15557 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 30453844 30454132 30453996 Y ZNRD1,TUBB RANP1,HLA-E HLA-E MCF7,K562 ChIA-PET 22265404 HLA-E 1112 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 30497378 30497566 30497432 Y PPP1R11,TRIM40,TRIM26,TRIM39,TRIM39,TRIM39-RPP21,PPP1R10,KIAA1949,KIAA1949,IER3,FLOT1,HLA-E,PRR3 RANP1,HLA-E,PRR3,GNL1,ABCF1 NA NA NA NA PRR3 25097 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 30716597 30717062 30716912 Y IER3 MDC1,TUBB,FLOT1,IER3 PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1 IMR90 Hi-C 24141950 IER3 6266 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 30717441 30717627 30717503 Y RPP21,SFTA2,PSORS1C1 MDC1,TUBB,FLOT1,IER3 PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1 IMR90 Hi-C 24141950 IER3 7110 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 30720004 30720713 30720325 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3 MDC1,TUBB,FLOT1,IER3 DPCR1,NRM,PPP1R18,MDC1,FLOT1,IER3,C6orf136,DHX16,DDR1,VARS2,SFTA2,CCHCR1,PSORS1C1,PSORS1C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER3 9673 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 30787859 30788252 30788206 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,IER3 NA FLOT1,TUBB,VARS2,DHX16,IER3,DDR1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDR1 53946 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 31702368 31703528 31702658 Y HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,SKIV2L,PBX2,NEU1,HSPA1L,HSPA1A,GPSM3,ATF6B,AGPAT1,C6orf47,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1 ABHD16A,DDAH2,CLIC1,MSH5,VWA7 NA NA NA NA CLIC1 2012 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 31705604 31706142 31705906 Y HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,PBX2,NEU1,HSPA1L,HSPA1B,HSPA1A,GPSM3,ATF6B,AGPAT1,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1 ABHD16A,DDAH2,CLIC1,VWA7 NA NA NA NA MSH5 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 31789672 31790268 31789876 Y NA VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48,NEU1 NA NA NA NA HSPA1B 3244 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr6 32789030 32789171 32789101 Y HSD17B8,PSMB8 HLA-DOB,TAP2,TAPSAR1,PSMB9,PSMB8,TAP1 NA NA NA NA HLA-DOB 6205 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 32802290 32802518 32802510 Y NA HLA-DOB,TAP2,TAPSAR1,PSMB9,PSMB8,TAP1 NA NA NA NA TAP2 2039 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 34202925 34203288 34202990 Y NA CYCSP55,HMGA1,C6orf1,RPL35P2 NA NA NA NA HMGA1 275 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 35035271 35035638 35035433 Y NA NA NA NA NA NA ANKS1A 180229 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 35337950 35338511 35338285 Y ZNF76,RPL10A,DEF6,PPARD PPARD NA NA NA NA PPARD 29615 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 35568316 35568651 35568441 Y NA RP3-340B19.2 NA NA NA NA RP3-340B19.2 46666 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 36391024 36391283 36391227 Y SRSF3,CDKN1A,CDKN1A,PXT1 ETV7,KCTD20,PXT1 NA NA NA NA KCTD20 17261 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 36391779 36391863 36391821 Y NA ETV7,KCTD20,PXT1 NA NA NA NA KCTD20 16681 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 36409257 36409482 36409373 Y MAPK14,BRPF3,STK38,SRSF3,CDKN1A,CDKN1A,ETV7,ETV7,PXT1,KCTD20 KCTD20,PXT1 NA NA NA NA PXT1 591 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 37024161 37024556 37024514 Y NA NA CPNE5,C6orf89,FGD2,PIM1,TMEM217,TBC1D22B IMR90 Hi-C 24141950 MTCH1 72087 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 37070053 37070857 37070460 Y CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2 NA PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 65122 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 37104908 37105418 37105405 Y NA PIM1 PIM1,CPNE5,TMEM217,PPIL1,C6orf89,FGD2,TBC1D22B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 30561 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 37210643 37210874 37210721 Y TMEM217,TMEM217 TBC1D22B,TMEM217 NA NA NA NA TBC1D22B 12674 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 38185251 38185625 38185371 Y BTBD9 NA NA NA NA NA ZFAND3 399976 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 39171657 39171958 39171719 Y NA KCNK5 NA NA NA NA KCNK5 23268 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 41649853 41650127 41649990 Y NA MDFI NA NA NA NA MDFI 47233 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 41686086 41686432 41686391 Y NA TFEB NA NA NA NA TFEB 15565 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 42081758 42081907 42081849 Y NA C6orf132 NA NA NA NA C6orf132 26450 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 42255073 42255501 42255249 Y NA NA NA NA NA NA MRPS10 71470 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 42283170 42283354 42283262 Y NA NA NA NA NA NA MRPS10 99567 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 42306418 42306926 42306742 Y UBR2,TRERF1 NA NA NA NA NA TRERF1 110863 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 42375139 42375533 42375327 Y NA TRERF1 NA NA NA NA TRERF1 42256 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr6 44205272 44205504 44205346 Y NFKBIE SLC29A1,HSP90AB1,SLC35B2,NFKBIE NA NA NA NA HSP90AB1 7320 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 44205807 44206020 44205896 Y NA SLC29A1,HSP90AB1,SLC35B2,NFKBIE NA NA NA NA HSP90AB1 6804 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 44396303 44396427 44396307 Y NA CDC5L NA NA NA NA CDC5L 43041 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 45319946 45320392 45320176 Y NA SUPT3H NA NA NA NA SUPT3H 23298 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 45322073 45322342 45322124 Y NA SUPT3H NA NA NA NA SUPT3H 21348 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 45557969 45558292 45558091 Y NA NA RUNX2,CDC5L,SUPT3H IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUPT3H 214279 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 45623562 45623937 45623654 Y NA NA RUNX2,SUPT3H,CLIC5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUPT3H 279872 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 46784396 46784595 46784543 Y NA NA NA NA NA NA SLC25A27 165718 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 47102503 47102708 47102571 Y NA NA TNFRSF21 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR110 94404 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 52217307 52217701 52217502 Y NA PAQR8 PAQR8,MCM3,EFHC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PAQR8 6518 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 52911792 52912057 52911925 Y NA FBXO9,ICK NA NA NA NA FBXO9 2732 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 53412768 53413364 53413026 Y GCLC NA NA NA NA NA GCLC 66404 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 53617793 53617916 53617855 Y NA LRRC1 LRRC1,GCLC IMR90 Hi-C 24141950 LRRC1 39379 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 53734127 53734150 53734138 Y NA NA NA NA NA NA LRRC1 76832 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 56296413 56296568 56296543 Y NA NA NA NA NA NA DST 520858 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr6 56315031 56315399 56315215 Y NA NA NA NA NA NA DST 502027 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 57046105 57046302 57046204 Y NA BAG2,RAB23 NA NA NA NA BAG2 10981 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 64151294 64151779 64151706 Y NA NA NA NA NA NA PTP4A1 77887 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 72294841 72295504 72295148 Y NA KRT19P1 RIMS1 IMR90 Hi-C 24141950 KRT19P1 2417 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr6 72683550 72683736 72683643 Y RIMS1 NA NA NA NA NA KRT19P1 391126 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 73329727 73330142 73329822 Y NA KCNQ5 NA NA NA NA KCNQ5 207 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 74289769 74290568 74290415 Y MB21D1,SLC17A5,CD109,CD109,EEF1A1 NA NA NA NA NA EEF1A1 58249 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 74295249 74295764 74295450 Y MB21D1,CD109,CD109,EEF1A1 NA NA NA NA NA EEF1A1 63729 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 75906514 75906841 75906796 Y NA COL12A1 NA NA NA NA COL12A1 6926 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 76494746 76495208 76494920 Y NA MYO6 NA NA NA NA MYO6 37837 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 77981127 77981489 77981308 Y NA NA NA NA NA NA MYO6 1524218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 78176276 78176348 78176306 Y NA NA NA NA NA NA IRAK1BP1 1398841 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 79773928 79774085 79774072 Y NA PHIP NA NA NA NA PHIP 11868 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 80246020 80246303 80246162 Y NA LCA5 NA NA NA NA LCA5 845 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 81044945 81045591 81045323 Y NA NA NA NA NA NA BCKDHB 230581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 81048044 81048318 81048128 Y NA NA NA NA NA NA BCKDHB 233680 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 82648128 82648420 82648330 Y NA NA NA NA NA NA FAM46A 187637 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 82953012 82953093 82953052 Y NA IBTK NA NA NA NA IBTK 2378 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 84101816 84101824 84101820 Y NA ME1 NA NA NA NA ME1 36973 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 85334002 85334301 85334152 Y NA NA NA NA NA NA TBX18 137936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 86113432 86113601 86113525 Y NT5E NT5E NT5E,SNX14 IMR90 Hi-C 24141950 NT5E 44208 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 88401154 88401337 88401278 Y NA AKIRIN2 NA NA NA NA AKIRIN2 8590 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 88408243 88408692 88408556 Y AKIRIN2 AKIRIN2 NA NA NA NA AKIRIN2 1235 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 89315918 89316052 89315985 Y NA NA NA NA NA NA ACTBP8 331210 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 90031448 90031662 90031542 Y PNRC1,UBE2J1 UBE2J1 NA NA NA NA UBE2J1 28905 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 90774597 90775020 90774993 Y NA NA NA NA NA NA BACH2 229607 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 90856849 90857084 90856969 Y NA NA NA NA NA NA BACH2 147543 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 91004075 91004656 91004496 Y MDN1,BACH2,BACH2 NA NA NA NA NA BACH2 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 91121051 91121489 91121257 Y BACH2,BACH2 NA BACH2,MIR4464 IMR90 Hi-C 24141950 BACH2 116424 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 91168030 91168508 91168309 Y NA NA BACH2,MDN1,CASP8AP2,GJA10 IMR90 Hi-C 24141950 MAP3K7 126256 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 93802046 93802077 93802062 Y NA NA NA NA NA NA EPHA7 325188 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 97632369 97632997 97632691 Y NA NA NA NA NA NA MMS22L 96096 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 100584000 100584312 100584155 Y NA NA SIM1,ASCC3 IMR90 Hi-C 24141950 SIM1 326493 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 101149750 101149957 101149936 Y NA NA NA NA NA NA RP1-121G13.3 173598 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 101204667 101204976 101204826 Y NA NA NA NA NA NA ASCC3 122272 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 105073456 105073750 105073604 Y LIN28B NA NA NA NA NA HACE1 232044 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 105907845 105908047 105907966 Y NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 58886 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 106049296 106049799 106049571 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PREP 200337 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 106440406 106440671 106440473 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 91524 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 106442778 106443178 106442990 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 89017 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 106537985 106538349 106538117 Y PRDM1,PRDM1 PRDM1 NA NA NA NA PRDM1 5790 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 108879521 108879931 108879808 Y SESN1,FOXO3,FOXO3 FOXO3 NA NA NA NA FOXO3 483 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 108883670 108884545 108884024 Y OSTM1,FOXO3,FOXO3 FOXO3 NA NA NA NA FOXO3 4632 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 108895400 108895781 108895496 Y NA FOXO3 NA NA NA NA FOXO3 16362 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 111666861 111666999 111666959 Y REV3L,FYN NA NA NA NA NA KIAA1919 88310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 111784023 111784230 111784203 Y NA REV3L NA NA NA NA REV3L 18688 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 113951649 113952852 113952545 Y MARCKS RP11-367G18.1 MARCKS,FLJ34503,LOC285758,HDAC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-367G18.1 16424 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 113975639 113976185 113975774 Y MARCKS RP11-367G18.1 MARCKS IMR90 Hi-C 24141950 RP11-367G18.1 6363 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 114005806 114006016 114005966 Y NA RP11-367G18.1 NA NA NA NA RP11-367G18.1 36530 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 114040344 114040537 114040454 Y MARCKS NA MARCKS IMR90 Hi-C 24141950 RP11-367G18.1 71068 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 114085047 114085453 114085192 Y MARCKS NA LAMA4 IMR90 Hi-C 24141950 MARCKS 91088 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 114176108 114176553 114176196 Y MARCKS NA NA NA NA NA MARCKS 0 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 115795867 115795888 115795877 Y NA NA NA NA NA NA FRK 584033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 116988703 116988966 116988944 Y DSE,ZUFSP,KPNA5 ZUFSP,KPNA5 NA NA NA NA ZUFSP 746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 121758280 121758805 121758450 Y GJA1 GJA1,RNU4-35P NA NA NA NA GJA1 3442 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 125622252 125622475 125622321 Y NA HDDC2 NA NA NA NA HDDC2 970 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 126068034 126068254 126068125 Y HEY2 HEY2,NCOA7 NA NA NA NA HEY2 1224 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 126241150 126241321 126241235 Y NCOA7 HINT3 NA NA NA NA HINT3 34606 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 127653585 127653894 127653740 Y NA ECHDC1 NA NA NA NA ECHDC1 8860 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 127892310 127892704 127892511 Y NA NA NA NA NA NA RP3-403A15.1 137529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 127958949 127959282 127959100 Y C6orf174 NA C6orf58,THEMIS IMR90 Hi-C 24141950 RP3-403A15.1 204168 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 127980874 127981174 127981075 Y NA NA NA NA NA NA RP3-403A15.1 226093 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 128496365 128496708 128496537 Y NA NA NA NA NA NA PTPRK 343162 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 128607751 128608140 128608092 Y NA NA NA NA NA NA PTPRK 231730 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 128840669 128840970 128840936 Y PTPRK,PTPRK PTPRK NA NA NA NA PTPRK 799 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 129816833 129816992 129816913 Y ARHGAP18 NA NA NA NA NA ARHGAP18 212378 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 129822485 129822770 129822701 Y NA NA NA NA NA NA ARHGAP18 206600 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 131594186 131594488 131594335 Y AKAP7,MED23,AKAP7 NA NA NA NA NA AKAP7 139380 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 132057565 132057807 132057687 Y NA NA NA NA NA NA ENPP1 69349 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 133133336 133133580 133133458 Y NA SNORD101 NA NA NA NA RPS12 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 133134288 133134908 133134317 Y NA RPS12 NA NA NA NA SNORD101 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 133787838 133788115 133788090 Y NA NA NA NA NA NA EYA4 228102 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 133890779 133890909 133890844 Y NA NA MGC34034,TBPL1,SLC2A12,TCF21 IMR90 Hi-C 24141950 EYA4 331043 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 134741718 134742020 134741875 Y SGK1,SGK1,SGK1 NA SGK1,LOC154092,ALDH8A1 IMR90 Hi-C 24141950 SGK1 104468 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 136795244 136795664 136795596 Y MAP7,MAP7 NA NA NA NA NA MAP7 74293 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 136983395 136983458 136983427 Y NA NA NA NA NA NA MAP7 113438 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 137114423 137114806 137114737 Y NA MAP3K5,PEX7 NA NA NA NA MAP3K5 2767 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 137181238 137181571 137181404 Y PEX7 PEX7 NA NA NA NA PEX7 39521 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 137558937 137559207 137559098 Y NA IFNGR1 IFNGR1,OLIG3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 IFNGR1 20351 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 137708334 137708542 137708434 Y IFNGR1,TNFAIP3 NA NA NA NA NA IFNGR1 169748 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138049891 138050457 138050087 Y TNFAIP3 NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 135894 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138085203 138085348 138085271 Y TNFAIP3 NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 101003 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 138111354 138111837 138111679 Y TNFAIP3 NA TNFAIP3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 74514 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138113661 138114081 138114010 Y OLIG3,TNFAIP3 NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 72270 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138132277 138133056 138132650 Y TNFAIP3 NA TNFAIP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 53295 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138194322 138194912 138194642 Y TNFAIP3 TNFAIP3 NA NA NA NA TNFAIP3 7971 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138353138 138353418 138353320 Y PERP NA PERP MCF7 ChIA-PET 22265404 PERP 73230 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 138356192 138356530 138356352 Y NA NA PERP MCF7 ChIA-PET 22265404 PERP 70118 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 138426575 138426770 138426671 Y PERP NA NA NA NA NA PERP 0 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 139348964 139349250 139349073 Y NA REPS1 NA NA NA NA REPS1 41566 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 140262103 140262492 140262357 Y NA NA CITED2,HECA IMR90 Hi-C 24141950 CITED2 568346 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 140399868 140400230 140399986 Y NA NA NA NA NA NA CITED2 706111 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 140807335 140807614 140807478 Y NA NA LOC100132735,CITED2 IMR90 Hi-C 24141950 CITED2 1113578 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 141765105 141765268 141765171 Y NA NA NA NA NA NA VTA1 701099 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 143206296 143206927 143206703 Y HIVEP2 NA NA NA NA NA HIVEP2 57411 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 143234166 143234456 143234293 Y HIVEP2 HIVEP2 NA NA NA NA HIVEP2 29882 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 146866760 146867250 146866919 Y RAB32 RAB32 NA NA NA NA RAB32 3931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 147124877 147125201 147125102 Y NA NA NA NA NA NA RAB32 262048 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 147643373 147644201 147643793 Y NA NA NA NA NA NA YAP1P1 81824 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 147985018 147985058 147985038 Y NA RP11-307P5.1 NA NA NA NA RP11-307P5.1 5179 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 148564785 148565120 148564953 Y NA SASH1 SASH1,SAMD5 IMR90 Hi-C 24141950 SASH1 26320 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 149069640 149070024 149069807 Y UST UST NA NA NA NA UST 3176 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 150010989 150011176 150011138 Y NA KATNA1,LATS1 NA NA NA NA LATS1 26216 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 150076607 150076998 150076645 Y KATNA1,LATS1 LATS1,PCMT1,NUP43 NA NA NA NA NUP43 7806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 151381285 151381592 151381452 Y NA RP1-292B18.1 NA NA NA NA RP1-292B18.1 37073 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 152085145 152085342 152085266 Y ESR1,ESR1,ESR1,ESR1 NA NA NA NA NA ESR1 109319 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 153983605 153984001 153983803 Y NA NA NA NA NA NA RP11-475C16.1 381737 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 154676071 154676546 154676403 Y NA NA NA NA NA NA CNKSR3 153247 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 154753926 154754309 154754118 Y CNKSR3 NA NA NA NA NA CNKSR3 75484 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 155636183 155636317 155636271 Y NA TFB1M NA NA NA NA TFB1M 2556 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 157007979 157008724 157008580 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 88339 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 157096939 157097165 157097038 Y NA NA NA NA NA NA ARID1B 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 157342507 157343524 157343342 Y ARID1B,ZDHHC14 NA NA NA NA NA ARID1B 245444 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 157542479 157542718 157542566 Y NA NA NA NA NA NA TMEM242 199915 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 158254729 158255396 158255020 Y NA SNX9 NA NA NA NA SNX9 12433 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 158314373 158314686 158314419 Y SNX9 NA NA NA NA NA SNX9 72077 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 158375265 158375579 158375328 Y NA SYNJ2 NA NA NA NA SYNJ2 25309 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 158424430 158424803 158424679 Y SYNJ2 SYNJ2 NA NA NA NA SYNJ2 23542 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 158987674 158988091 158987879 Y NA NA NA NA NA NA DYNLT1 75680 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 159141436 159141829 159141621 Y TAGAP,DYNLT1,SYTL3,C6orf99,EZR,EZR NA NA NA NA NA DYNLT1 77665 CAGE HCC1806 hg19 FANTOM5 4.47348326004898 chr6 159211450 159211647 159211549 Y TAGAP,SYTL3,EZR,EZR EZR NA NA NA NA EZR 26797 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 159226894 159227283 159227272 Y NA EZR NA NA NA NA EZR 11161 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 159229924 159230242 159230166 Y TAGAP,SYTL3,EZR,EZR EZR NA NA NA NA EZR 8202 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 159234698 159235091 159235070 Y NA EZR NA NA NA NA EZR 3353 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 159270971 159271326 159271104 Y TAGAP,SYTL3,EZR,EZR EZR,C6orf99 NA NA NA NA C6orf99 17645 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr6 159271429 159272000 159271674 Y TAGAP,SYTL3,EZR,EZR EZR,C6orf99 NA NA NA NA C6orf99 16971 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr6 159273925 159274893 159274526 Y TAGAP,SYTL3,EZR,EZR EZR,C6orf99 NA NA NA NA C6orf99 14078 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr6 160141572 160141909 160141740 Y MAS1,IGF2R,SOD2,WTAP,WTAP WTAP,ACAT2,SOD2 LOC100129518,ACAT2,WTAP,SOD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WTAP 2708 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 160179285 160179503 160179396 Y NA WTAP,SOD2,TCP1,MRPL18 NA NA NA NA ACAT2 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 163833938 163834442 163834340 Y NA QKI NA NA NA NA QKI 906 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 163881453 163881850 163881463 Y NA QKI NA NA NA NA QKI 48421 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 163972161 163972427 163972234 Y NA NA NA NA NA NA QKI 139129 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 166970262 166970784 166970543 Y NA NA NA NA NA NA SFT2D1 216183 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 167001220 167001407 167001338 Y NA NA NA NA NA NA SFT2D1 247141 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 167411045 167411413 167411177 Y NA RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP NA NA NA NA FGFR1OP 375 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr6 168216462 168216639 168216532 Y NA MLLT4 NA NA NA NA MLLT4 8963 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 168558082 168558596 168558447 Y NA NA NA NA NA NA MLLT4 332480 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 169308928 169309266 169309084 Y THBS2 NA WDR27,LINC00574,PHF10,C6orf70,PSMB1,SMOC2,LINC00242 IMR90 Hi-C 24141950 WDR27 790893 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr6 169569548 169569688 169569622 Y NA NA C6orf70,THBS2,PHF10,WDR27 IMR90 Hi-C 24141950 WDR27 530471 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 170054470 170055295 170054892 Y TCTE3 WDR27,C6orf120 NA NA NA NA WDR27 44864 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 170467648 170467815 170467737 Y TCTE3,FAM120B NA NA NA NA NA DLL1 129746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 170492436 170492647 170492551 Y NA NA NA NA NA NA DLL1 104914 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr6 170600439 170600921 170600644 Y NA DLL1,FAM120B NA NA NA NA FAM120B 2648 CAGE HCC1806 hg19 FANTOM5 8.24062705798497 chr7 373094 373351 373247 Y PRKAR1B NA FLJ44511,PDGFA MCF7 ChIA-PET 22265404 FAM20C 182125 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr7 387969 388196 388081 Y PDGFA NA NA NA NA NA PDGFA 169737 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 409137 409513 409244 Y NA NA NA NA NA NA PDGFA 148420 CAGE HCC1806 hg19 FANTOM5 3.53169731056499 chr7 475920 475996 475984 Y NA NA HEATR2,PRKAR1B MCF7 ChIA-PET 22265404 PDGFA 81937 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr7 850307 850449 850380 Y SUN1,SUN1 SUN1 NA NA NA NA SUN1 3079 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 875702 875833 875757 Y SUN1,SUN1 SUN1,GET4 NA NA NA NA SUN1 22174 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1329910 1330257 1330187 Y NA NA UNCX IMR90 Hi-C 24141950 ZFAND2A 131515 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 1416814 1417157 1416984 Y NA NA NA NA NA NA MICALL2 79981 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 1495047 1495214 1495102 Y NA MICALL2,INTS1 NA NA NA NA MICALL2 1924 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1553000 1553189 1553120 Y ZFAND2A,MAFK INTS1,MAFK,TMEM184A MICALL2,INTS1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 INTS1 9511 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1560213 1560697 1560426 Y C7orf50,TMEM184A,PSMG3,PSMG3,MAFK INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3 NA NA NA NA MAFK 7653 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr7 1571273 1571500 1571366 Y ZFAND2A,MAFK INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3 NA NA NA NA MAFK 2923 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1572262 1572844 1572636 Y ZFAND2A,MAFK INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3 NA NA NA NA MAFK 3912 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr7 1598591 1598955 1598779 Y NA MAFK,TMEM184A,PSMG3-AS1,PSMG3 NA NA NA NA TMEM184A 134 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1706379 1706695 1706444 Y NA NA MAD1L1,KIAA1908,PSMG3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSMG3 97738 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1709256 1709641 1709356 Y NA NA MAD1L1,KIAA1908 IMR90 Hi-C 24141950 PSMG3 100615 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 1945683 1945719 1945693 Y NA NA NA NA NA NA MAD1L1 325159 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2006506 2006818 2006734 Y NA NA NA NA NA NA MAD1L1 264060 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2106199 2106418 2106303 Y NA NA NA NA NA NA MAD1L1 164460 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2356665 2356933 2356799 Y NA EIF3B,SNX8 NA NA NA NA EIF3B 34788 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2569854 2570215 2570046 Y LFNG,LFNG,IQCE,BRAT1 LFNG,BRAT1,IQCE NA NA NA NA LFNG 19691 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2575019 2575461 2575251 Y NA LFNG,BRAT1,IQCE NA NA NA NA BRAT1 17900 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2697261 2697345 2697303 Y IQCE TTYH3,AMZ1 NA NA NA NA AMZ1 19811 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2797465 2798227 2798113 Y SNX8,LFNG,GNA12 NA NA NA NA NA AC006028.11 75028 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2875013 2875360 2875015 Y NA AC006028.11,GNA12 NA NA NA NA AC006028.11 1758 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2903227 2903785 2903462 Y LFNG,LFNG,TTYH3,GNA12 AC006028.11,GNA12 GNA12 MCF7 ChIA-PET 22265404 GNA12 21269 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 2960647 2961036 2960906 Y NA NA NA NA NA NA GNA12 78689 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 2980860 2981267 2981182 Y NA NA NA NA NA NA GNA12 98902 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr7 3018099 3018595 3018309 Y NA NA NA NA NA NA CARD11 62984 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 4764796 4765177 4765030 Y KIAA0415 NA NA NA NA NA FOXK1 83408 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 5471668 5472052 5471860 Y NA TNRC18 WIPI2,SLC29A4,TNRC18,RNF216 IMR90 Hi-C 24141950 TNRC18 8623 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 5490349 5490801 5490564 Y NA TNRC18 TNRC18 MCF7 ChIA-PET 22265404 TNRC18 27304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 5492663 5492953 5492758 Y MMD2,SLC29A4 TNRC18 TNRC18 MCF7 ChIA-PET 22265404 TNRC18 29618 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 5609221 5609424 5609333 Y FBXL18 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACTB 7806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 5609541 5610012 5609880 Y SLC29A4,TNRC18,FBXL18,FSCN1 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACTB 8126 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 5634980 5635411 5634989 Y AIMP2,FBXL18,ACTB,FSCN1 ACTB,FSCN1 RNF216 IMR90 Hi-C 24141950 FSCN1 4541 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr7 6145406 6145878 6145682 Y USP42 EIF2AK1,AC004895.4,USP42 NA NA NA NA USP42 2891 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 6425136 6425343 6425226 Y CCZ1,USP42 RAC1 NA NA NA NA RAC1 12982 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 6677371 6677641 6677424 Y DAGLB,ZNF12,C7orf26 C7orf26,ZNF316 NA NA NA NA ZNF316 2418 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 6682292 6682670 6682512 Y C7orf26 ZNF316 NA NA NA NA ZNF316 7339 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 6741580 6741996 6741754 Y C7orf26,ZNF853,C7orf28B,ZNF12 ZNF12,PMS2CL NA NA NA NA ZNF12 2558 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 7604061 7604281 7604173 Y MIOS MIOS NA NA NA NA MIOS 222 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 7605671 7605858 7605804 Y NA MIOS NA NA NA NA MIOS 1168 CAGE HCC1806 hg19 FANTOM5 4.47348326004898 chr7 11293871 11294115 11293993 Y NA NA NA NA NA NA PHF14 282372 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 11860647 11861050 11860853 Y THSD7A NA NA NA NA NA TMEM106B 387817 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 12463736 12464090 12463948 Y NA VWDE NA NA NA NA VWDE 22169 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 13057101 13057487 13057331 Y NA NA ARL4A IMR90 Hi-C 24141950 ARL4A 332620 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 15408798 15409004 15408901 Y NA NA NA NA NA NA ISPD 1049943 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 16060900 16061318 16061010 Y NA NA NA NA NA NA ISPD 397629 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 16751358 16751548 16751453 Y NA TSPAN13 NA NA NA NA TSPAN13 39612 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 16886935 16887473 16887050 Y NA AGR2,AGR3 NA NA NA NA AGR2 15878 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 17225443 17225596 17225470 Y AHR NA NA NA NA NA AHR 110650 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 17564000 17564574 17564249 Y NA NA AHR IMR90 Hi-C 24141950 AC003075.4 227019 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 18583507 18583829 18583636 Y NA NA NA NA NA NA HDAC9 458935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 20054783 20055072 20055055 Y NA RPL21P75 NA NA NA NA RPL21P75 14437 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 20191913 20192270 20192088 Y TWISTNB NA NA NA NA NA MACC1 62757 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 20217388 20217681 20217578 Y TWISTNB,MACC1 MACC1,AC005083.1 NA NA NA NA MACC1 37346 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 21502446 21502711 21502550 Y SP4 SP4 NA NA NA NA SP4 36794 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 22622740 22623204 22623070 Y NA STEAP1B NA NA NA NA STEAP1B 47340 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 23229571 23229876 23229614 Y NA NUPL2,GPNMB NA NA NA NA NUPL2 10125 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 23375804 23376081 23376055 Y IGF2BP3 NA NA NA NA NA GPNMB 102218 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 23410116 23410259 23410188 Y NA NA NA NA NA NA IGF2BP3 97827 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 23510676 23511223 23510889 Y NUPL2,C7orf30,IGF2BP3 IGF2BP3 NA NA NA NA IGF2BP3 2590 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 23513815 23514383 23514045 Y NUPL2,C7orf30,IGF2BP3 IGF2BP3 MALSU1 K562 ChIA-PET 22265404 IGF2BP3 5729 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 24813861 24813988 24813926 Y OSBPL3 DFNA5 DFNA5,OSBPL3 IMR90 Hi-C 24141950 DFNA5 6617 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 24826484 24826966 24826807 Y C7orf31,DFNA5,DFNA5 DFNA5 NA NA NA NA DFNA5 19240 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 24861129 24861331 24861204 Y C7orf31,DFNA5 NA NA NA NA NA DFNA5 53885 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 24924727 24925102 24925076 Y NA NA NA NA NA NA OSBPL3 94151 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 24947142 24947425 24947387 Y NA NA NA NA NA NA OSBPL3 71828 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 25002827 25003181 25002973 Y C7orf31,OSBPL3 OSBPL3 NA NA NA NA OSBPL3 16072 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 25064852 25065012 25064919 Y NA OSBPL3 OSBPL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OSBPL3 45599 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 25980642 25980887 25980804 Y NA NA NA NA NA NA NFE2L3 208973 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 26193570 26193972 26193862 Y SNX10,SNX10,HNRNPA2B1 NFE2L3,CBX3,HNRNPA2B1 NA NA NA NA NFE2L3 3710 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 27386345 27386573 27386562 Y NA NA NA NA NA NA RPL35P4 79048 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 28076890 28077172 28076964 Y CREB5 NA NA NA NA NA JAZF1 141190 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 28191527 28192056 28191751 Y NA JAZF1 NA NA NA NA JAZF1 26306 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 30265497 30265992 30265714 Y ZNRF2 NA NA NA NA NA ZNRF2 55931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 30387689 30388072 30387783 Y NOD1,ZNRF2 AC006978.6 NA NA NA NA AC006978.6 20915 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 33079333 33079582 33079400 Y NA NA NA NA NA NA RP9 67431 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 36480174 36480717 36480189 Y NA NA NA NA NA NA KIAA0895 52440 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 37221797 37222057 37221923 Y NA NA NA NA NA NA NPM1P18 365233 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 39695521 39695649 39695585 Y NA RALA NA NA NA NA RALA 34439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 40088776 40089159 40088837 Y NA NA NA NA NA NA CDK13 101140 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 40938770 40939089 40938937 Y NA NA C7orf10,LOC285954,INHBA IMR90 Hi-C 24141950 INHBA 801617 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr7 42927750 42928726 42928340 Y NA C7orf25,MRPL32,PSMA2 NA NA NA NA C7orf25 21178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 43608248 43608485 43608352 Y NA STK17A NA NA NA NA STK17A 11872 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 43612098 43612408 43612297 Y DBNL STK17A NA NA NA NA STK17A 7949 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 43658377 43658532 43658408 Y POLM,STK17A,URGCP STK17A NA NA NA NA STK17A 38020 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 43670120 43670185 43670135 Y POLM,DBNL,STK17A STK17A NA NA NA NA STK17A 49763 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 43683947 43684262 43684105 Y POLM,DBNL,STK17A NA NA NA NA NA STK17A 63590 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 43959007 43959429 43959215 Y NA URGCP,UBE2D4 NA NA NA NA URGCP 4581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 43996825 43996925 43996859 Y NA URGCP,UBE2D4,AC004951.5 NA NA NA NA AC004951.5 30881 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 44436686 44437032 44436900 Y NA NA NA NA NA NA AC004453.8 68409 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 44658456 44658730 44658526 Y PURB,TMED4,OGDH DDX56,TMED4,OGDH NA NA NA NA OGDH 14285 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 46072625 46072971 46072717 Y NA NA NA NA NA NA IGFBP3 113152 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 46186122 46186484 46186177 Y IGFBP3 NA IGFBP3 IMR90 Hi-C 24141950 IGFBP3 226649 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 46331323 46331686 46331505 Y NA NA NA NA NA NA IGFBP3 371850 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 46385021 46385087 46385052 Y NA NA IGFBP3 IMR90 Hi-C 24141950 IGFBP3 425548 CAGE HCC1806 hg19 FANTOM5 2.58991136108099 chr7 46691155 46691159 46691157 Y NA NA IGFBP3 IMR90 Hi-C 24141950 AC004870.4 316141 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 46691314 46691685 46691473 Y NA NA IGFBP3 IMR90 Hi-C 24141950 AC004870.4 315615 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 46920965 46921354 46921105 Y NA NA NA NA NA NA AC004870.4 85946 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr7 47366502 47366627 47366552 Y NA NA NA NA NA NA TNS3 253529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 47390589 47390737 47390670 Y NA NA NA NA NA NA TNS3 229419 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 47514732 47515208 47514929 Y TNS3 NA NA NA NA NA TNS3 104948 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 47573930 47574208 47574136 Y NA TNS3 NA NA NA NA TNS3 45948 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 47675013 47675155 47675094 Y TNS3 NA TNS3,C7orf69,PKD1L1,C7orf65,LINC00525 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNS3 54857 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 47709189 47709374 47709294 Y UPP1,UPP1,HUS1 NA NA NA NA NA TNS3 89033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 48126389 48126700 48126545 Y NA UPP1 NA NA NA NA UPP1 164 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 55131480 55131905 55131522 Y EGFR EGFR NA NA NA NA EGFR 46766 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 55134555 55134962 55134733 Y NA EGFR NA NA NA NA EGFR 49841 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 55155188 55155533 55155358 Y EGFR NA NA NA NA NA EGFR 70474 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 55200352 55201043 55200686 Y SEC61G,EGFR NA NA NA NA NA EGFR 115638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 55529793 55530311 55530129 Y ZNF713,VOPP1 NA NA NA NA NA LANCL2 98652 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 57639323 57639702 57639567 Y ZNF479,ZNF716 NA NA NA NA NA CHCHD2 1467054 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 57706434 57706786 57706770 Y ZNF716 NA NA NA NA NA CHCHD2 1534165 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 57710851 57711018 57710972 Y NA NA NA NA NA NA CHCHD2 1538582 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 65715824 65716062 65715909 Y RABGEF1,KCTD7 TPST1 NA NA NA NA TPST1 47638 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 66152523 66152575 66152558 Y RABGEF1,KCTD7 RP4-756H11.3,RABGEF1 KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 RABGEF1 7372 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 69213443 69213490 69213467 Y NA NA NA NA NA NA RP5-859M6.1 1109658 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 70773105 70773491 70773390 Y NA NA NA NA NA NA TYW1B 1523286 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 73062013 73062614 73062579 Y BAZ1B,ABHD11,MLXIPL,STX1A MLXIPL,WBSCR22,DNAJC30 MLXIPL,MIR4284,WBSCR22,STX1A IMR90 Hi-C 24141950 MLXIPL 25140 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr7 73236868 73237278 73236968 Y CLDN3,CLDN4 CLDN4,WBSCR27 NA NA NA NA WBSCR27 17587 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 73311055 73311352 73311116 Y NA NA NA NA NA NA WBSCR27 56190 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 74064444 74064957 74064539 Y GTF2IRD2B,LAT2 GTF2I NA NA NA NA GTF2I 5037 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 75465283 75465439 75465360 Y MDH2 CCL26,RHBDD2 STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR IMR90 Hi-C 24141950 RHBDD2 4481 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 75795833 75796053 75795969 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 120464 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 75934206 75934543 75934471 Y NA HSPB1 NA NA NA NA HSPB1 4345 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 75947305 75947626 75947472 Y RHBDD2,SRRM3 HSPB1,YWHAG NA NA NA NA HSPB1 17444 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 76009173 76009680 76009431 Y POR YWHAG,ZP3,SRCRB4D NA NA NA NA ZP3 15155 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 84613691 84613734 84613712 Y NA AC074183.4 NA NA NA NA AC074183.4 46130 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 92217809 92218139 92217980 Y NA FAM133B NA NA NA NA FAM133B 101 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 92233387 92233691 92233548 Y NA FAM133B FAM133B MCF7,K562 ChIA-PET 22265404 FAM133B 15679 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 92437286 92437617 92437517 Y SAMD9 CDK6 NA NA NA NA CDK6 26291 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 92745192 92745375 92745297 Y SAMD9 SAMD9L NA NA NA NA SAMD9 0 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr7 95861904 95862185 95862172 Y NA NA NA NA NA NA SLC25A13 87274 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 97994295 97994325 97994312 Y BAIAP2L1 RPS3AP26,BAIAP2L1 BRI3 IMR90 Hi-C 24141950 RPS3AP26 19571 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 98650927 98651298 98651264 Y NA NA NA NA NA NA SMURF1 88425 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 98809347 98809684 98809536 Y ZNF655,ZNF655,ZKSCAN5,PTCD1,PDAP1,FAM200A,CPSF4,BUD31,ATP5J2,ARPC1A,SMURF1,KPNA7 NA SMURF1 IMR90 Hi-C 24141950 SMURF1 69624 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 99000499 99000617 99000560 Y NA ARPC1B,BUD31,PDAP1,CPSF4 NA NA NA NA BUD31 3647 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 99785086 99785350 99785241 Y ZKSCAN1,MCM7,GATS C7orf43,GAL3ST4,GPC2 NA NA NA NA GPC2 12091 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 99961767 99962035 99961969 Y NA PILRB,PMS2P1 PILRA IMR90 Hi-C 24141950 PMS2P1 24236 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 99969754 99970252 99970079 Y OR2AE1,C7orf59,ZCWPW1,SLC12A9,MEPCE,LRCH4,GNB2,PILRB,PILRA PILRB,PMS2P1 NA NA NA NA PMS2P1 32223 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 100752309 100752636 100752570 Y NA TRIM56,SERPINE1,AP1S1 NA NA NA NA SERPINE1 15734 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 100952176 100952182 100952179 Y NA RABL5 NA NA NA NA RABL5 10922 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 101525517 101525682 101525579 Y SH2B2,CUX1,CUX1 NA NA NA NA NA CUX1 68558 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 101526005 101526525 101526438 Y SH2B2,CUX1,CUX1 NA NA NA NA NA CUX1 69046 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 101567515 101567769 101567671 Y NA NA NA NA NA NA CUX1 110556 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 101929978 101930313 101930074 Y CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2 NA NA NA NA NA PRKRIP1 72006 CAGE HCC1806 hg19 FANTOM5 3.06080433582299 chr7 105088667 105088879 105088749 Y MLL5,ATXN7L1,SRPK2 NA NA NA NA NA SRPK2 50912 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 105223133 105223294 105223281 Y NA EFCAB10 NA NA NA NA EFCAB10 16028 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 105449570 105449934 105449707 Y ATXN7L1,ATXN7L1 NA NA NA NA NA ATXN7L1 65116 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 105766301 105766504 105766403 Y NA SYPL1 CDHR3,ATXN7L1,SYPL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SYPL1 15279 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 105922869 105923204 105923197 Y NA NAMPT NA NA NA NA NAMPT 1568 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 106058630 106058799 106058684 Y NAMPT,PIK3CG,FLJ36031 NA NAMPT,CCDC71L,CDHR3 IMR90 Hi-C 24141950 NAMPT 133858 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 107026511 107026865 107026723 Y NA NA NA NA NA NA DUS4L 175064 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 107554407 107554624 107554481 Y DLD DLD NA NA NA NA DLD 24992 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 107555392 107555607 107555420 Y NA DLD NA NA NA NA DLD 25977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 107562078 107562130 107562088 Y NA DLD NA NA NA NA DLD 32663 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 107567511 107567568 107567540 Y NA DLD NA NA NA NA DLD 38096 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 111721905 111722337 111722086 Y ZNF277,IFRD1,DOCK4 NA NA NA NA NA DOCK4 122129 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 113233852 113234207 113234027 Y NA NA NA NA NA NA LINC00998 477184 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 114056337 114056620 114056363 Y NA NA NA NA NA NA FOXP2 331955 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 115887290 115887609 115887434 Y NA TES,CAV2 NA NA NA NA CAV2 37825 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 115995232 115995555 115995330 Y CAV2,CAV2,CAV1,CAV1,CAV1,CAV1 NA CAV2,CAV1,TES,MET IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CAV2 69798 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 116083167 116083483 116083344 Y CAV2,CAV2,CAV1,CAV1,CAV1,CAV1 NA TES,CAV2,CAV1,MET IMR90,MCF7,HELA Hi-C,ChIA-PET,5C 24141950,22265404,22955621 AC002066.1 54036 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 116271021 116271344 116271193 Y NA MET TES,CAV1,MET,CAPZA2 IMR90,H1ESC,GM12878 Hi-C,5C 24141950,22955621 MET 39100 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 116314942 116315351 116315128 Y ST7,TES,CAV2,CAV2,MET MET NA NA NA NA MET 4498 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 116319612 116319902 116319758 Y NA MET NA NA NA NA MET 9168 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 116356493 116356879 116356812 Y NA MET NA NA NA NA MET 46049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 116595969 116596160 116596016 Y NA ST7,ST7-AS1 NA NA NA NA ST7-AS1 3581 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 117502091 117502393 117502383 Y NA NA NA NA NA NA NAA38 319693 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 118520575 118520914 118520745 Y NA NA NA NA NA NA NAA38 698489 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 119269873 119270211 119270042 Y NA NA NA NA NA NA RP11-328J2.1 275218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 119283625 119284006 119283817 Y NA NA NA NA NA NA RP11-328J2.1 261423 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 119435371 119435694 119435534 Y NA NA NA NA NA NA RP11-328J2.1 109735 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 120938122 120938485 120938307 Y FAM3C WNT16 NA NA NA NA WNT16 24936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 121120093 121120403 121120217 Y NA NA NA NA NA NA FAM3C 85675 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 128170830 128171695 128171212 Y NA RP11-212P7.1 IMPDH1,HILPDA,METTL2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-212P7.1 37047 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr7 128500948 128501348 128501123 Y NA FLNC,ATP6V1F,KCP NA NA NA NA ATP6V1F 68 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 129419876 129420343 129420085 Y NA NA NRF1,UBE2H MCF7 ChIA-PET 22265404 NRF1 170321 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 129464915 129465297 129464948 Y NA NA NA NA NA NA UBE2H 125492 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 129508183 129508482 129508331 Y NA NA NA NA NA NA UBE2H 82307 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 129589680 129589810 129589737 Y NA UBE2H NA NA NA NA UBE2H 979 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 129590044 129590333 129590306 Y NA UBE2H NA NA NA NA UBE2H 456 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130586004 130586434 130586371 Y NA NA NA NA NA NA MKLN1 206421 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr7 130588239 130588699 130588531 Y MKLN1,MKLN1 NA MIR29A,MIR29B1 IMR90 Hi-C 24141950 MKLN1 204156 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130589567 130590049 130589961 Y NA NA MIR29A,MIR29B1 IMR90 Hi-C 24141950 MKLN1 202806 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130601178 130601963 130601463 Y MKLN1,MKLN1 NA FLJ43663 IMR90 Hi-C 24141950 MKLN1 190892 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130645057 130645459 130645325 Y MKLN1,MKLN1 NA NA NA NA NA MKLN1 147396 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130696655 130697004 130696978 Y NA NA NA NA NA NA MKLN1 95851 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130720133 130720826 130720768 Y MKLN1,MKLN1 NA NA NA NA NA MKLN1 72029 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 130756735 130757090 130757043 Y NA MKLN1,LINC-PINT NA NA NA NA MKLN1 35765 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 134117156 134117311 134117298 Y NA AKR1B1 NA NA NA NA AKR1B1 24725 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr7 134862087 134862457 134862329 Y NA TMEM140,C7orf49,WDR91 NA NA NA NA C7orf49 8540 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 135120473 135120740 135120725 Y NA NA NA NA NA NA CNOT4 72135 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 135443440 135443607 135443468 Y FAM180A FAM180A C7orf73,SLC13A4 IMR90 Hi-C 24141950 FAM180A 11846 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 135665513 135665767 135665568 Y NA MTPN NA NA NA NA MTPN 5412 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr7 137387266 137387617 137387499 Y NA NA NA NA NA NA CREB3L2 297196 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 139227178 139227349 139227257 Y NA ERHP1 NA NA NA NA ERHP1 10192 CAGE HCC1806 hg19 FANTOM5 6.35705515901697 chr7 148334506 148334940 148334775 Y NA NA NA NA NA NA CUL1 58066 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 148684338 148684706 148684475 Y NA PDIA4 NA NA NA NA PDIA4 39027 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 151192969 151193321 151193145 Y NA RHEB NA NA NA NA RHEB 21885 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 152065077 152065428 152065152 Y NA NA NA NA NA NA XRCC2 305822 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr7 152105895 152106094 152106005 Y NA NA NA NA NA NA XRCC2 265156 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 153105018 153105427 153105361 Y NA NA NA NA NA NA ACTR3B 650184 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr7 154743291 154743691 154743552 Y NA PAXIP1 NA NA NA NA PAXIP1 49103 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 155006028 155006426 155006187 Y NA NA NA NA NA NA INSIG1 81060 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 155137693 155138087 155137815 Y NA NA INSIG1,PAXIP1,LOC100132707,LOC100128264,HTR5A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INSIG1 50207 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 155276719 155276807 155276762 Y PAXIP1,CNPY1 NA NA NA NA NA RBM33 158338 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr7 155714561 155715080 155714837 Y NA NA LMBR1 IMR90 Hi-C 24141950 AC009403.2 278662 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 156735476 156735625 156735551 Y MNX1 NOM1 LMBR1 K562 ChIA-PET 22265404 NOM1 4792 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 157131379 157131690 157131421 Y NA DNAJB6 NA NA NA NA DNAJB6 5304 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 158224670 158224991 158224878 Y NA NA NA NA NA NA NCAPG2 270529 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr7 158500449 158500649 158500582 Y NA NCAPG2 NA NA NA NA NCAPG2 4929 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr7 158613624 158614053 158613981 Y ESYT2 ESYT2,WDR60 NA NA NA NA ESYT2 6891 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 479972 480137 480087 Y NA NA NA NA NA NA FBXO25 125544 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 638062 638589 638348 Y ZNF596,ZNF596,ERICH1 ERICH1 NA NA NA NA ERICH1 47517 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 1693574 1694042 1693752 Y CLN8 CLN8,CTD-2336O2.1 ARHGEF10,CLN8,MIR596,KBTBD11,ZNF596 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLN8 7902 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 1897074 1897760 1897667 Y NA KBTBD11 NA NA NA NA KBTBD11 22284 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 2588091 2588111 2588101 Y NA NA NA NA NA NA KBTBD11 668047 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 2591169 2591450 2591225 Y NA NA NA NA NA NA KBTBD11 671125 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 6275449 6275723 6275483 Y NA MCPH1 NA NA NA NA MCPH1 13336 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 9912937 9913246 9913138 Y NA MSRA NA NA NA NA MSRA 3159 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 11312887 11313950 11313920 Y NA NA NA NA NA NA AF131216.5 109876 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 11734631 11734824 11734746 Y CTSB CTSB CTSB,BLK,FDFT1,FAM167A IMR90 Hi-C 24141950 CTSB 9674 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 13988363 13988798 13988479 Y NA NA NA NA NA NA C8orf48 566011 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 15395546 15395769 15395644 Y NA NA NA NA NA NA TUSC3 122822 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 16265487 16265655 16265571 Y NA NA MSR1 IMR90 Hi-C 24141950 ZDHHC2 745883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 16280941 16281214 16281102 Y MSR1 NA NA NA NA NA ZDHHC2 730324 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 16304872 16305090 16304981 Y NA NA TUSC3 IMR90 Hi-C 24141950 ZDHHC2 706448 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 19566953 19567512 19567287 Y NA NA CSGALNACT1,SH2D4A IMR90 Hi-C 24141950 INTS10 105139 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 20131379 20131735 20131639 Y NA NA DOK2,XPO7 IMR90 Hi-C 24141950 ATP6V1B2 78501 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 21775759 21776194 21775973 Y PHYHIP,DOK2,NPM2 XPO7 NA NA NA NA XPO7 579 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 21999982 22000221 22000101 Y POLR3D NUDT18,HR,REEP4,BMP1 NA NA NA NA REEP4 2518 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 22513437 22513754 22513670 Y NA BIN3,EGR3 NA NA NA NA BIN3 10907 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 22808149 22808394 22808223 Y NA RHOBTB2 PEBP4,TNFRSF10B,BIN3,EGR3,RHOBTB2 IMR90 Hi-C 24141950 RHOBTB2 34536 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 23710742 23711028 23710888 Y STC1 STC1 NA NA NA NA STC1 422 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 27474556 27474730 27474657 Y NA CLU,SCARA3 SCARA3,TRIM35,CLU,CCDC25,ESCO2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CLU 4008 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 27630770 27631068 27630863 Y NA ESCO2,CCDC25 NA NA NA NA CCDC25 2600 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 28258528 28258941 28258737 Y HMBOX1,HMBOX1 ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 310 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 29230784 29230978 29230896 Y KIF13B,DUSP4 DUSP4 C8orf75,LOC286135,MIR3148,MIR548O2,TMEM66,LEPROTL1,DUSP4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 24599 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 29526859 29527039 29527017 Y NA NA LOC286135,DUSP4,C8orf75 IMR90 Hi-C 24141950 DUSP4 320674 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 29533274 29533303 29533292 Y NA NA DUSP4 IMR90 Hi-C 24141950 DUSP4 327089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 30462940 30463157 30463081 Y NA NA NA NA NA NA GTF2E2 50611 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 30580467 30580796 30580574 Y GSR GSR,UBXN8 NA NA NA NA GSR 2647 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 32490865 32491103 32490993 Y NRG1,NRG1 NA NA NA NA NA FUT10 837837 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 32508172 32508500 32508337 Y NRG1,NRG1 NA NA NA NA NA FUT10 820440 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 32603273 32603561 32603417 Y NA NA NA NA NA NA FUT10 725379 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 33579772 33580017 33579844 Y NA NA NA NA NA NA RP1-273G13.1 135724 CAGE HCC1806 hg19 FANTOM5 11.065984906437 chr8 33668021 33668356 33668148 Y NA RP1-273G13.1 NA NA NA NA RP1-273G13.1 47385 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 33718252 33718557 33718395 Y NA RP1-273G13.1 NA NA NA NA RP1-273G13.1 2511 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 33747203 33747216 33747209 Y NA RP1-273G13.1 NA NA NA NA RP1-273G13.1 31462 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 35382808 35383133 35382968 Y NA LSM12P1 NA NA NA NA LSM12P1 1527 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr8 36441429 36441454 36441442 Y NA NA NA NA NA NA RP11-962G15.1 193228 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 38867572 38867594 38867583 Y C8orf86 TM2D2,ADAM9 NA NA NA NA ADAM9 15184 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 38895649 38895937 38895811 Y TACC1,PLEKHA2,HTRA4 TM2D2,ADAM9 NA NA NA NA ADAM9 43261 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 39797063 39797940 39797610 Y NA IDO1 NA NA NA NA IDO1 39269 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr8 39809132 39809914 39809384 Y NA NA NA NA NA NA IDO1 51338 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 39912317 39912749 39912459 Y C8orf4 NA C8orf4,ZMAT4 IMR90 Hi-C 24141950 C8orf4 96240 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 39956643 39956887 39956760 Y C8orf4 NA C8orf4 IMR90 Hi-C 24141950 C8orf4 52102 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 41628099 41628173 41628135 Y ANK1 NA NA NA NA NA RP11-360L9.4 194212 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 43092918 43093442 43093017 Y HOOK3 NA NA NA NA NA HGSNAT 99362 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 48265920 48266584 48265994 Y NA NA NA NA NA NA NDUFA5P12 191427 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 48434780 48435210 48435108 Y CEBPD NA NA NA NA NA CEBPD 214438 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 48814148 48814416 48814291 Y NA NA NA NA NA NA PRKDC 56327 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 49426952 49427328 49427172 Y SNAI2 NA SNAI2 IMR90 Hi-C 24141950 RPL29P19 131802 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 49430601 49430974 49430806 Y NA NA SNAI2 IMR90 Hi-C 24141950 RPL29P19 135451 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 49701443 49701572 49701502 Y NA NA SNAI2 IMR90 Hi-C 24141950 EFCAB1 55573 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 49783004 49783154 49783067 Y SNAI2 SNAI2 NA NA NA NA SNAI2 49145 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 49835974 49836286 49836197 Y SNAI2 SNAI2 NA NA NA NA SNAI2 3675 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr8 54256811 54256964 54256882 Y NA NA NA NA NA NA RP11-400K9.4 177527 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 54798731 54798762 54798749 Y NA ATP6V1H,RGS20 NA NA NA NA RGS20 36363 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 55366813 55366957 55366864 Y NA NA SOX17 K562 ChIA-PET 22265404 MRPL15 321043 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 56796346 56796794 56796413 Y LYN LYN NA NA NA NA LYN 5974 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 56818311 56818706 56818376 Y NA LYN NA NA NA NA LYN 27939 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 59763369 59763610 59763548 Y NA NA NA NA NA NA NSMAF 192966 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 59878188 59878486 59878337 Y NA NA NA NA NA NA RP11-25K19.1 151113 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 60154501 60154880 60154691 Y NA NA NA NA NA NA TOX 124734 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 61850490 61850754 61850677 Y NA NA CHD7 IMR90 Hi-C 24141950 CHD7 261153 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 61850776 61851191 61851141 Y NA NA CHD7 IMR90 Hi-C 24141950 CHD7 261439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 62534300 62534453 62534449 Y NA NA NA NA NA NA ASPH 90702 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 62620817 62621622 62621526 Y NA ASPH,MIR4470 NA NA NA NA ASPH 3533 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 62634023 62634407 62634126 Y NA ASPH,MIR4470 NA NA NA NA MIR4470 8676 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 63776641 63776831 63776733 Y NA NA NA NA NA NA GGH 172899 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 66935018 66935363 66935175 Y PDE7A NA NA NA NA NA AC084082.3 87539 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 68075038 68075412 68075329 Y NA NA NA NA NA NA COPS5 81020 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 70042378 70042779 70042585 Y NA NA NA NA NA NA SULF1 334080 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 71031909 71031920 71031915 Y NA RNU1-101P,RP11-152C15.1 NA NA NA NA RP11-152C15.1 17495 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 74371877 74372089 74371987 Y RDH10 NA NA NA NA NA RPL7 165853 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 74926613 74926741 74926708 Y UBE2W,TMEM70,LY96 TCEB1,TMEM70,RP11-367E12.4,LY96 NA NA NA NA LY96 25026 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 77515612 77515766 77515691 Y NA NA NA NA NA NA ZFHX4 75688 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 77590079 77590470 77590424 Y ZFHX4 ZFHX4 NA NA NA NA ZFHX4 984 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 81699574 81699876 81699725 Y NA NA NA NA NA NA ZBTB10 303720 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 87358801 87359051 87358932 Y NA WWP1 NA NA NA NA WWP1 5834 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 91064955 91065319 91065136 Y NA NA NA NA NA NA NBN 51499 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 92112003 92112264 92112167 Y NA GS1-251I9.4,OTUD6B NA NA NA NA OTUD6B 31579 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 95003706 95004122 95004001 Y NA NA LINC00535,RBM12B,RAD54B,CDH17,GEM IMR90 Hi-C 24141950 PDP1 135671 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 95943173 95943450 95943312 Y NA CCNE2,TP53INP1 NA NA NA NA TP53INP1 16189 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 98865970 98866240 98866105 Y NA RPS23P1,MATN2 NA NA NA NA RPS23P1 9042 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 98892233 98892331 98892282 Y NA RPS23P1,MATN2 NA NA NA NA MATN2 13165 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 99952429 99952792 99952702 Y NA STK3,OSR2 NA NA NA NA STK3 263 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 99953302 99954000 99953407 Y STK3,OSR2 STK3,OSR2 NA NA NA NA STK3 247 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 101427912 101428321 101428112 Y SPAG1,SPAG1,RNF19A,RNF19A NA SPAG1,RNF19A,ANKRD46,MIR4471 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19A 81466 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 101512336 101512720 101512423 Y SPAG1,SPAG1 NA NA NA NA NA ANKRD46 57292 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 101731045 101731633 101731441 Y NA PABPC1 NA NA NA NA PABPC1 1404 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr8 101821654 101822280 101821977 Y RNF19A,YWHAZ,YWHAZ,YWHAZ NA SNX31,PABPC1,ANKRD46 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PABPC1 88617 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 101912406 101912993 101912785 Y PABPC1,ZNF706,ZNF706,YWHAZ,YWHAZ NA NA NA NA NA YWHAZ 50623 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 101920209 101920392 101920320 Y PABPC1,ZNF706,ZNF706,YWHAZ,YWHAZ YWHAZ NA NA NA NA YWHAZ 43224 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 102015928 102016078 102016021 Y NA NA FLJ42969,YWHAZ,ZNF706 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YWHAZ 52312 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 102075998 102076526 102076187 Y GRHL2 NA NA NA NA NA YWHAZ 112382 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 102103047 102103317 102103255 Y YWHAZ NA NA NA NA NA ZNF706 113104 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 102185716 102186115 102186035 Y NA ZNF706 YWHAZ,FLJ42969,ZNF706 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 30306 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 102423654 102423774 102423714 Y NA NA GRHL2 MCF7 ChIA-PET 22265404 NACAP1 51632 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 102449376 102449720 102449428 Y GRHL2 NA NACAP1 MCF7 ChIA-PET 22265404 GRHL2 52940 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 102450789 102450808 102450799 Y GRHL2 NA NACAP1 MCF7 ChIA-PET 22265404 GRHL2 51852 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 102505547 102505759 102505677 Y GRHL2 GRHL2 NA NA NA NA GRHL2 2887 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr8 102505982 102506363 102506168 Y GRHL2 GRHL2 NA NA NA NA GRHL2 3322 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr8 102665065 102665479 102665281 Y NA NA NA NA NA NA GRHL2 162405 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 103411260 103411483 103411351 Y UBR5 UBR5 NA NA NA NA UBR5 11586 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 103422542 103423104 103422992 Y NA NA NA NA NA NA UBR5 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 103486772 103487100 103486937 Y NA NA ODF1 IMR90 Hi-C 24141950 UBR5 63703 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 103669513 103669869 103669680 Y AZIN1,ATP6V1C1,KLF10,KLF10 KLF10 NA NA NA NA KLF10 3383 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 103757592 103757997 103757773 Y NA NA KLF10,UBR5 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF10 91462 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 104059632 104059708 104059689 Y NA ATP6V1C1 NA NA NA NA ATP6V1C1 28341 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 106582164 106582354 106582260 Y NA NA NA NA NA NA ZFPM2 253244 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 106764019 106764032 106764026 Y NA NA NA NA NA NA RP11-152P17.2 306720 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 106878097 106878155 106878126 Y NA NA OXR1 IMR90 Hi-C 24141950 RP11-152P17.2 192597 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 107870700 107870850 107870776 Y NA NA ANGPT1 IMR90 Hi-C 24141950 TAGLN2P1 162459 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 110602225 110602239 110602235 Y SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,KCNV1 NA NA NA NA NA EBAG9 52285 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 111930854 111931258 111931125 Y NA NA NA NA NA NA SYBU 1228834 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 114257291 114257677 114257549 Y CSMD3 NA NA NA NA NA TRPS1 2562222 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 115322659 115322858 115322759 Y NA NA NA NA NA NA TRPS1 1497041 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 115707569 115707650 115707588 Y NA NA NA NA NA NA TRPS1 1112249 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 116450341 116450508 116450425 Y NA NA NA NA NA NA TRPS1 369391 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 116988617 116988643 116988632 Y NA NA NA NA NA NA TRPS1 168718 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 117456775 117457003 117456919 Y NA RP11-536K17.1 TRPS1,LINC00536 IMR90 Hi-C 24141950 RP11-536K17.1 42780 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chr8 117484091 117484236 117484201 Y C8orf85 NA NA NA NA NA RP11-536K17.1 70096 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 117711370 117711748 117711590 Y NA NA NA NA NA NA UTP23 64994 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 117744101 117744355 117744228 Y NA UTP23,EIF3H NA NA NA NA UTP23 32387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 118958698 118959000 118958912 Y NA NA NA NA NA NA EXT1 163092 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 118969079 118969407 118969255 Y MED30 NA NA NA NA NA EXT1 152685 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 119013126 119013396 119013387 Y NA NA NA NA NA NA EXT1 108696 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 119023512 119024035 119023740 Y EXT1 NA NA NA NA NA EXT1 98057 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 119117518 119117887 119117807 Y NA EXT1 NA NA NA NA EXT1 4205 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 119862438 119862804 119862573 Y NA NA TNFRSF11B IMR90 Hi-C 24141950 RPS26P35 89998 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 120779948 120780281 120780115 Y NA NA NA NA NA NA TAF2 62822 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 121456351 121456697 121456524 Y SNTB1,MTBP,MRPL13 MTBP,MRPL13 NA NA NA NA MRPL13 709 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 122157265 122157468 122157378 Y NA NA NA NA NA NA RP11-369K17.1 233960 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr8 122335950 122336427 122336136 Y NA NA HAS2,HAS2-AS1 IMR90 Hi-C 24141950 HAS2 315203 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 122755244 122755615 122755430 Y NA NA NA NA NA NA HAS2 103614 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 124248679 124249062 124248866 Y NA C8orf76,ZHX1 NA NA NA NA C8orf76 2576 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 124337288 124337362 124337325 Y NA NA NA NA NA NA ZHX1 51507 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 124547812 124548082 124548041 Y NA FBXO32 NA NA NA NA FBXO32 3364 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 124549741 124550229 124550044 Y FBXO32,FBXO32 FBXO32 NA NA NA NA FBXO32 1217 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr8 124816728 124816894 124816751 Y NA FAM91A1 NA NA NA NA FAM91A1 38032 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 125302460 125302812 125302637 Y TMEM65,RNF139 NA NA NA NA NA TMEM65 80121 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 125367728 125368050 125367886 Y TRMT12,TATDN1,NDUFB9 TMEM65 NA NA NA NA TMEM65 14883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 125513273 125513673 125513472 Y NA RNF139-AS1,RNF139,NDUFB9,TATDN1 NA NA NA NA RNF139 28294 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 125672540 125672913 125672841 Y NA NA NA NA NA NA MTSS1 65817 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 125764120 125764533 125764318 Y ZNF572,NSMCE2,KIAA0196,RNF139,MTSS1 MTSS1 MTSS1,ZNF572,NDUFB9,TATDN1,LOC157381,SQLE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MTSS1 25390 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 125774132 125774476 125774333 Y NSMCE2,KIAA0196,RNF139,MTSS1 MTSS1 LOC157381,MTSS1,ZNF572,SQLE IMR90 Hi-C 24141950 MTSS1 35402 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126083515 126083743 126083629 Y NA NSMCE2,KIAA0196 NA NA NA NA NSMCE2 18178 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126193275 126193543 126193371 Y NA NA TRIB1 IMR90 Hi-C 24141950 KIAA0196 91193 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126195292 126195668 126195512 Y TRIB1,KIAA0196,NSMCE2 NA TRIB1 IMR90 Hi-C 24141950 KIAA0196 93210 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 126231490 126231859 126231657 Y MTSS1,KIAA0196,NSMCE2,TRIB1 NA NA NA NA NA KIAA0196 129408 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 126238973 126239274 126239019 Y NSMCE2,TRIB1 NA NA NA NA NA KIAA0196 136891 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126245115 126245425 126245196 Y KIAA0196,NSMCE2,TRIB1 NA NA NA NA NA KIAA0196 143033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126268557 126268681 126268622 Y NA NA NA NA NA NA KIAA0196 166475 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126286229 126286368 126286299 Y KIAA0196,NSMCE2,TRIB1 NA NA NA NA NA TRIB1 154195 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 126290719 126290948 126290836 Y NA NA NA NA NA NA TRIB1 149615 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr8 126398775 126398955 126398863 Y KIAA0196,NSMCE2,TRIB1 TRIB1 NA NA NA NA TRIB1 41608 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126441416 126441734 126441625 Y KIAA0196,NSMCE2,TRIB1 TRIB1 NA NA NA NA TRIB1 853 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 126556751 126557301 126556981 Y NA NA NSMCE2,KIAA0196,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 116188 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr8 127908732 127908971 127908856 Y NA NA MYC,LOC727677,PVT1 IMR90 Hi-C 24141950 CCAT1 320362 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 127927068 127927434 127927240 Y NA NA NA NA NA NA CCAT1 301899 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 127928770 127929133 127928805 Y FAM84B NA NA NA NA NA CCAT1 300200 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 128048074 128048382 128048201 Y NA NA NA NA NA NA CCAT1 180951 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128099457 128099542 128099514 Y NA NA NA NA NA NA CCAT1 129791 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 128180134 128180587 128180334 Y NA CCAT1 PCAT1,POU5F1B,LOC727677 IMR90 Hi-C 24141950 CCAT1 48746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128218099 128218752 128218687 Y NA CCAT1 LOC727677,MYC IMR90 Hi-C 24141950 CCAT1 10581 CAGE HCC1806 hg19 FANTOM5 1.41267892422599 chr8 128222835 128223182 128223058 Y NA CCAT1 LOC727677,MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCAT1 6151 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128237300 128237732 128237515 Y NA CCAT1 LOC727677,MYC,PVT1 IMR90 Hi-C 24141950 CCAT1 7967 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128265922 128266338 128266337 Y NA CCAT1 PVT1 IMR90 Hi-C 24141950 CCAT1 36589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128305149 128305567 128305521 Y NA NA NA NA NA NA CCAT1 75816 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr8 128306934 128307283 128307196 Y MYC NA LOC727677 IMR90 Hi-C 24141950 CCAT1 77601 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 128680448 128680536 128680487 Y MYC NA MYC,PVT1 MCF7 ChIA-PET 22265404 MYC 65144 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 128680816 128681380 128681307 Y MYC NA MYC,PVT1 MCF7 ChIA-PET 22265404 MYC 64300 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 128821272 128821652 128821500 Y MYC PVT1 NA NA NA NA PVT1 16493 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128871975 128872421 128872033 Y NA NA NA NA NA NA PVT1 67196 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 128926432 128926732 128926619 Y NA NA NA NA NA NA RNU4-25P 94125 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 128930937 128931257 128931067 Y NA NA NA NA NA NA RNU4-25P 89600 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 129076309 129076777 129076518 Y NA NA NA NA NA NA RNU4-25P 55452 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 129180047 129180432 129180183 Y NA NA NA NA NA NA RNU4-25P 159190 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 129188825 129189407 129189075 Y NA NA MYC,PVT1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNU4-25P 167968 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 129195465 129196052 129195562 Y NA NA PVT1,MYC IMR90 Hi-C 24141950 RNU4-25P 174608 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 129397787 129398025 129397906 Y NA NA MYC IMR90 Hi-C 24141950 RNU4-25P 376930 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 129659601 129660006 129659683 Y NA NA MYC MCF7 ChIA-PET 22265404 RNU4-25P 638744 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 130720341 130720558 130720412 Y NA NA PVT1 IMR90 Hi-C 24141950 GSDMC 76576 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 130897837 130898360 130898140 Y NA NA NA NA NA NA GSDMC 100703 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 130907129 130907396 130907263 Y NA NA NA NA NA NA GSDMC 109995 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 130997889 130997894 130997892 Y NA FAM49B NA NA NA NA FAM49B 29481 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 131027030 131027189 131027125 Y NA FAM49B NA NA NA NA FAM49B 186 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 131054431 131054834 131054758 Y NA FAM49B NA NA NA NA FAM49B 27056 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 131296023 131296343 131296248 Y NA NA NA NA NA NA ASAP1 157563 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 131364558 131364729 131364627 Y NA NA NA NA NA NA ASAP1 89177 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 131454495 131454885 131454765 Y NA ASAP1 NA NA NA NA ASAP1 589 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 131456841 131457348 131457080 Y NA ASAP1 NA NA NA NA ASAP1 2935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 131495645 131495684 131495664 Y NA ASAP1 ASAP1 IMR90 Hi-C 24141950 ASAP1 41739 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 134538889 134539172 134539021 Y SLA,ST3GAL1 ST3GAL1 NA NA NA NA ST3GAL1 43011 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 135843585 135843751 135843688 Y ZFAT NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFAT 120293 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr8 135984758 135985124 135984941 Y NA NA NA NA NA NA ZFAT 261466 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 137308696 137309144 137308876 Y NA NA NA NA NA NA RNU1-35P 555958 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 139279809 139280062 139279816 Y NA NA NA NA NA NA KCNK9 1433237 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141189770 141190115 141189943 Y TRAPPC9,TRAPPC9 NA NA NA NA NA TRAPPC9 276563 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 141555144 141555348 141555233 Y EIF2C2,CHRAC1 CHRAC1 NA NA NA NA CHRAC1 35747 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141598802 141599709 141599120 Y TRAPPC9,CHRAC1,EIF2C2 NA NA NA NA NA CHRAC1 79405 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141606825 141607480 141607253 Y TRAPPC9,CHRAC1,EIF2C2 NA NA NA NA NA CHRAC1 87428 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141607900 141608150 141608005 Y NA NA NA NA NA NA CHRAC1 88503 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141800912 141801386 141801027 Y TRAPPC9,CHRAC1,EIF2C2 NA NA NA NA NA PTK2 208929 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141804565 141804680 141804623 Y NA NA NA NA NA NA PTK2 205635 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141849368 141849592 141849371 Y TRAPPC9 NA NA NA NA NA PTK2 160723 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 141886994 141887102 141887066 Y PTK2 NA NA NA NA NA PTK2 123213 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr8 141945462 141945818 141945641 Y NA NA NA NA NA NA PTK2 64497 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 142047873 142048201 142048171 Y PTK2 PTK2 PTK2,DENND3,SLC45A4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTK2 37558 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 142084181 142084412 142084295 Y PTK2 DENND3 PTK2,DENND3,EIF2C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 40965 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 142141816 142141930 142141883 Y EIF2C2,SLC45A4,DENND3 DENND3 NA NA NA NA DENND3 16439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 142215999 142216277 142216212 Y DENND3,SLC45A4 NA NA NA NA NA DENND3 90622 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chr8 142247795 142248221 142248078 Y DENND3,PTP4A3,SLC45A4 NA NA NA NA NA SLC45A4 68183 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 142255319 142255549 142255470 Y DENND3,SLC45A4 NA NA NA NA NA SLC45A4 60855 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr8 142386413 142386490 142386444 Y GPR20 PTP4A3 NA NA NA NA PTP4A3 13603 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 143479468 143479691 143479580 Y NA TSNARE1 NA NA NA NA TSNARE1 2910 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 143757526 143757895 143757616 Y NA PSCA,JRK,LY6K NA NA NA NA JRK 3491 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 143813380 143813410 143813405 Y GPIHBP1 LY6K,LYPD2,LYNX1 NA NA NA NA LYPD2 18542 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 144360422 144361034 144360946 Y ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT ZFP41,GLI4,RP13-582O9.5,ZNF696 NA NA NA NA RP13-582O9.5 826 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 144627865 144628210 144628007 Y SPATC1,GRINA ZC3H3,GSDMD,NAPRT1,TIGD5 NA NA NA NA GSDMD 5167 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 144799188 144799437 144799334 Y MAPK15 ZNF707,MAPK15,FAM83H,FAM83H-AS1 NA NA NA NA MAPK15 2759 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 145015768 145015971 145015849 Y FAM83H,EPPK1,PLEC,PLEC,PLEC PLEC,GRINA NA NA NA NA PLEC 32931 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 145025737 145026802 145026365 Y ZC3H3,GSDMD,NAPRT1,EEF1D,SPATC1,PLEC,PARP10 PLEC,GRINA NA NA NA NA PLEC 22100 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 145088816 145089042 145088955 Y PLEC,GRINA,SPATC1 PLEC,GRINA,PARP10,OPLAH,EXOSC4,CTD-3065J16.9,GPAA1 NA NA NA NA PARP10 3876 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 145549095 145549459 145549304 Y NA BOP1,HSF1,DGAT1,FBXL6,ADCK5 NA NA NA NA DGAT1 522 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr8 146010487 146010786 146010731 Y NA ZNF251,RPL8,ZNF7 NA NA NA NA ZNF34 0 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr9 545729 545758 545741 Y NA NA NA NA NA NA KANK1 77438 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 631583 631920 631840 Y KANK1 NA NA NA NA NA KANK1 163292 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 4656742 4656927 4656747 Y PPAPDC2,CDC37L1,C9orf68 PPAPDC2,CDC37L1 NA NA NA NA PPAPDC2 3371 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 4738592 4738723 4738708 Y NA AK3 NA NA NA NA AK3 1320 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 6488249 6488567 6488283 Y NA NA NA NA NA NA UHRF2 77098 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 6680895 6681975 6681336 Y UHRF2,KDM4C RP11-106A1.2,RP11-390F4.6,KDM4C KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 36888 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 10027810 10028140 10027960 Y NA NA NA NA NA NA RPS26P3 938934 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 10572313 10572444 10572379 Y NA NA NA NA NA NA RPS26P3 1483437 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 11065025 11065362 11065124 Y NA NA NA NA NA NA RP11-3L8.3 1746982 CAGE HCC1806 hg19 FANTOM5 5.17982272216198 chr9 13237438 13237544 13237492 Y NA MPDZ NA NA NA NA MPDZ 40045 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 14322295 14322910 14322674 Y ZDHHC21,NFIB NA NA NA NA NA NFIB 74072 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 16869534 16869976 16869661 Y BNC2 NA NA NA NA NA CNTLN 263004 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 20552301 20552464 20552406 Y MLLT3 NA NA NA NA NA MLLT3 68078 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 21096394 21096639 21096525 Y KIAA1797 NA MLLT3,KIAA1797 IMR90 Hi-C 24141950 PTPLAD2 66759 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 21695810 21696232 21696052 Y NA NA MIR31HG IMR90 Hi-C 24141950 MTAP 104310 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr9 21696521 21696698 21696606 Y IFNA6,IFNA1 NA MIR31HG IMR90 Hi-C 24141950 MTAP 103844 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 21696721 21697113 21696912 Y IFNA8 NA MIR31HG IMR90 Hi-C 24141950 MTAP 103429 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 21836477 21836868 21836612 Y NA MTAP NA NA NA NA MTAP 35935 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 26921358 26921728 26921543 Y NA IFT74,PLAA NA NA NA NA IFT74 23309 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 27333351 27333416 27333383 Y IFT74,IFT74,MOBKL2B,C9orf72,C9orf72 NA NA NA NA NA MOB3B 194363 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 28259858 28260256 28260250 Y LINGO2 NA NA NA NA NA MOB3B 732079 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 29826048 29826378 29826215 Y NA NA NA NA NA NA MOB3B 2298269 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 32395934 32396350 32396089 Y NA ACO1 NA NA NA NA ACO1 13316 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 33028063 33028460 33028077 Y NA APTX,DNAJA1,SMU1 NA NA NA NA DNAJA1 4854 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 34016159 34016420 34016379 Y NA UBAP2 NA NA NA NA UBAP2 30527 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr9 34452221 34452408 34452315 Y ARID3C,ENHO,CNTFR,CNTFR,C9orf25 NA C9orf24,KIAA1161 IMR90 Hi-C 24141950 KIAA1161 77370 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 35603992 35604628 35604112 Y TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2 TESK1 NA NA NA NA TESK1 625 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 35971862 35972364 35972237 Y NA YBX1P10 C9orf128,HRCT1,LOC158376,FP588,RECK IMR90 Hi-C 24141950 YBX1P10 1547 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 36232002 36232125 36232063 Y GNE CLTA,GNE NA NA NA NA GNE 42928 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 36471008 36471193 36471156 Y NA RNF38 RNF38,MELK IMR90 Hi-C 24141950 RNF38 14352 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr9 36621370 36621719 36621545 Y NA NA NA NA NA NA MELK 50511 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 36924974 36925090 36925030 Y MELK NA NA NA NA NA ZCCHC7 193446 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 37930298 37930375 37930337 Y NA NA NA NA NA NA EXOSC3 130864 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 38386799 38386908 38386853 Y NA ALDH1B1,IGFBPL1 NA NA NA NA ALDH1B1 3753 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 68419808 68420298 68419990 Y NA RP11-764K9.4 NA NA NA NA RP11-764K9.4 33077 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 68455261 68455556 68455421 Y NA RP11-764K9.4 NA NA NA NA RP11-764K9.4 1886 CAGE HCC1806 hg19 FANTOM5 4.94437623479098 chr9 71728196 71728449 71728285 Y NA TJP2 NA NA NA NA TJP2 5760 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 71789916 71790363 71790201 Y TJP2 NA NA NA NA NA TJP2 55707 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 71795556 71796114 71795819 Y TJP2 NA NA NA NA NA TJP2 61347 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 72801648 72801771 72801710 Y MAMDC2 NA NA NA NA NA SMC5 70166 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 73025378 73025559 73025525 Y NA KLF9 NA NA NA NA KLF9 1981 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 73033763 73035382 73035076 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 6223 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr9 73035561 73035945 73035863 Y KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 8021 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 74515794 74516103 74515949 Y NA C9orf85 NA NA NA NA C9orf85 8323 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 74581601 74581796 74581711 Y NA NA NA NA NA NA C9orf85 57175 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 74823247 74823495 74823337 Y NA NA NA NA NA NA GDA 95736 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 75747117 75747734 75747349 Y ANXA1 ANXA1 ANXA1 IMR90 Hi-C 24141950 ANXA1 16939 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr9 78507446 78507579 78507560 Y PCSK5 PCSK5 NA NA NA NA PCSK5 3886 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 79018113 79018533 79018297 Y NA RFK,GCNT1 NA NA NA NA RFK 10680 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 80550119 80550397 80550258 Y NA NA NA NA NA NA GNAQ 93977 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 81637955 81638246 81638090 Y NA NA NA NA NA NA TLE4 546442 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 82213229 82213622 82213243 Y NA TLE4 NA NA NA NA TLE4 28541 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 82226280 82226508 82226439 Y TLE4 TLE4 NA NA NA NA TLE4 41592 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 85888522 85888919 85888721 Y NA NA NA NA NA NA RP11-439K3.1 56276 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 86088348 86088544 86088498 Y NA NA NA NA NA NA FRMD3 62917 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 87569128 87569215 87569172 Y NTRK2,NTRK2,NTRK2 NA NA NA NA NA AGTPBP1 785729 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 89626902 89626982 89626949 Y NA CDC20P1 NA NA NA NA CDC20P1 2335 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 89627893 89628105 89627999 Y NA CDC20P1 NA NA NA NA CDC20P1 3326 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 89699545 89699882 89699714 Y NA NA NA NA NA NA CDC20P1 74978 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 91795136 91795669 91795494 Y C9orf47,SHC3 NA NA NA NA NA CKS2 128444 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr9 95442702 95442889 95442796 Y IPPK IPPK IPPK IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IPPK 12155 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 95878204 95878686 95878424 Y IPPK,PHF2,FAM120A,C9orf89,NINJ1 C9orf89,NINJ1 NA NA NA NA NINJ1 15884 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 96377714 96377795 96377762 Y PHF2 PHF2 NA NA NA NA PHF2 41025 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 96434811 96435085 96434948 Y PHF2 NA NA NA NA NA PHF2 98122 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 96928143 96928630 96928259 Y NA NA NA NA NA NA ZNF169 90963 CAGE HCC1806 hg19 FANTOM5 2.11901838633899 chr9 96928795 96929410 96929111 Y NA NA NA NA NA NA ZNF169 90183 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr9 97630074 97630491 97630387 Y NA NA NA NA NA NA C9orf3 143091 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 97684288 97685133 97684708 Y NA NA FANCC IMR90 Hi-C 24141950 C9orf3 197305 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 97966859 97967268 97967183 Y NA NA NA NA NA NA FANCC 110723 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 98054647 98055067 98054952 Y NA FANCC NA NA NA NA FANCC 22924 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 98075518 98075673 98075591 Y NA FANCC NA NA NA NA FANCC 2318 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 98744078 98744248 98744144 Y NA NA NA NA NA NA LINC00476 107819 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 99106686 99107122 99106995 Y NA HSD17B3,SLC35D2 NA NA NA NA SLC35D2 36870 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 99181547 99181719 99181643 Y NA SLC35D2,RP11-172F4.2,ZNF367,HABP4 NA NA NA NA ZNF367 2936 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 100565577 100566264 100565821 Y CORO2A,FOXE1 FOXE1 FOXE1,C9orf156 IMR90 Hi-C 24141950 FOXE1 47272 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 100747732 100748046 100747912 Y NA ANP32B NA NA NA NA ANP32B 4089 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 101010652 101010785 101010720 Y C9orf156,NANS,TBC1D2 TBC1D2 NA NA NA NA TBC1D2 5130 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 101011075 101011589 101011252 Y C9orf156,NANS,TBC1D2 TBC1D2 NA NA NA NA TBC1D2 4326 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 102585833 102586368 102586147 Y ERP44,NR4A3 NR4A3 NA NA NA NA NR4A3 3696 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 103795840 103796119 103795981 Y LPPR1 NA NA NA NA NA MRPL50 362777 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 110109718 110109795 110109757 Y NA NA NA NA NA NA RAD23B 66300 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 110500244 110500586 110500377 Y NA NA KLF4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF4 249481 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 111315008 111315237 111315108 Y NA NA KLF4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-220D10.1 71876 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 111386829 111386933 111386883 Y NA RP11-220D10.1 KLF4 IMR90 Hi-C 24141950 RP11-220D10.1 180 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 111774521 111775173 111774726 Y NA CTNNAL1 NA NA NA NA CTNNAL1 712 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 113014576 113014999 113014920 Y AKAP2,TXN TXN NA NA NA NA TXN 1921 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 113020211 113020679 113020386 Y AKAP2 TXN NA NA NA NA TXN 3291 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 113507067 113507395 113507232 Y NA NA NA NA NA NA LPAR1 291586 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 113645848 113645899 113645874 Y OR2K2 NA NA NA NA NA LPAR1 153082 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 113753501 113753784 113753656 Y NA LPAR1 NA NA NA NA LPAR1 45197 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 114111620 114111657 114111640 Y OR2K2 NA NA NA NA NA KIAA0368 133368 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 114505631 114505796 114505739 Y NA C9orf84 NA NA NA NA C9orf84 49492 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 114792518 114792641 114792625 Y NA NA NA NA NA NA UGCG 135472 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 115031676 115032066 115031959 Y KIAA1958 NA NA NA NA NA PTBP3 61881 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 115067475 115067560 115067518 Y SNX30,ROD1,KIAA1958,HSDL2 PTBP3 NA NA NA NA PTBP3 26387 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 115914968 115915416 115915186 Y SNX30,SLC46A2,RGS3,SLC31A2,FKBP15 SLC31A2 NA NA NA NA SLC31A2 3746 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 116385277 116385518 116385372 Y RGS3 NA NA NA NA NA RGS3 180266 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 117249092 117249487 117249472 Y NA DFNB31 NA NA NA NA DFNB31 16243 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 117314293 117314590 117314355 Y TNFSF8,TNFSF15,DFNB31,ATP6V1G1 DFNB31,ATP6V1G1 DFNB31,ATP6V1G1,C9orf91 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP6V1G1 33436 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 118024698 118025071 118024956 Y NA NA NA NA NA NA C9orf91 653212 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 118434933 118435213 118435118 Y NA NA ASTN2,PAPPA,LOC100128505 IMR90 Hi-C 24141950 TRIM32 1012368 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 121324577 121324756 121324667 Y NA NA NA NA NA NA TRIM32 1876996 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 123243513 123243809 123243661 Y NA NA NA NA NA NA CDK5RAP2 96639 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 123251976 123252022 123252001 Y CDK5RAP2 NA NA NA NA NA CDK5RAP2 88426 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 124131208 124131276 124131236 Y NA STOM GSN MCF7 ChIA-PET 22265404 STOM 677 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 124361597 124361984 124361689 Y NA DAB2IP NA NA NA NA DAB2IP 34261 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr9 124499221 124499709 124499392 Y NA NA NA NA NA NA DAB2IP 171885 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 125654025 125654372 125654281 Y NA RC3H2,ZBTB6,ZBTB26,RABGAP1 NA NA NA NA RC3H2 11248 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 126154038 126154354 126154284 Y NA NA NA NA NA NA STRBP 125183 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 127155102 127155374 127155331 Y DENND1A PSMB7 NA NA NA NA PSMB7 20349 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 127519137 127519296 127519279 Y NA NR6A1,OLFML2A NA NA NA NA NR6A1 12293 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 127519728 127520109 127519909 Y NA NR6A1,OLFML2A NA NA NA NA NR6A1 11480 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 127944437 127944756 127944696 Y NR6A1,GOLGA1,PPP6C,GAPVD1 SCAI,PPP6C,RABEPK NA NA NA NA PPP6C 5462 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 127980597 127980978 127980790 Y NA PPP6C,RABEPK,HSPA5,GAPVD1 NA NA NA NA RABEPK 19776 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 128172483 128172773 128172647 Y NA NA PBX3 MCF7 ChIA-PET 22265404 GAPVD1 150410 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr9 128211957 128212104 128212028 Y NA NA NA NA NA NA GAPVD1 189884 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 130225118 130225493 130225306 Y SH2D3C,SH2D3C,DPM2,LRSAM1 ZNF79,SNORA65,RPL12,LRSAM1 NA NA NA NA LRSAM1 13353 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 130329548 130329691 130329605 Y PTRH1,FPGS,FPGS,ENG,CDK9,FAM129B,FAM129B FAM129B,STXBP1 NA NA NA NA FAM129B 9577 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 130336494 130336746 130336628 Y TOR2A,FPGS,FPGS,CDK9,FAM129B FAM129B,STXBP1 NA NA NA NA FAM129B 2522 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 130731999 130732057 130732026 Y SLC25A25,DPM2,FAM102A DPM2,FAM102A NA NA NA NA FAM102A 8735 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 130736209 130736450 130736330 Y NA DPM2,FAM102A NA NA NA NA FAM102A 4342 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 130764123 130764312 130764223 Y FAM129B,TOR2A,CDK9,FPGS FAM102A FAM102A,DPM2,PIP5KL1,SLC25A25,NAIF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM102A 23331 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 130834459 130834744 130834726 Y NA SLC25A25,NAIF1 NA NA NA NA NAIF1 5974 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 131127114 131127521 131127297 Y SLC25A25 COQ4,TRUB2,SLC27A4,URM1,CERCAM NA NA NA NA URM1 4077 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 131929415 131929566 131929473 Y METTL11A,C9orf106 IER5L NA NA NA NA IER5L 8974 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 131930457 131930532 131930510 Y PRRX2 IER5L NA NA NA NA IER5L 8008 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 131937094 131937487 131937262 Y PRRX2,METTL11A,ASB6,ZDHHC12,TBC1D13,ENDOG,PHYHD1,DOLK,CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L IER5L NA NA NA NA IER5L 1053 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132040752 132040968 132040856 Y NA RP11-344B5.2 C9orf106,IER5L,LOC100506190,PPP2R4,CRAT,C9orf50,METTL11A IMR90,MCF7,HELA,K562 Hi-C,ChIA-PET,5C 24141950,22265404,22955621 RP11-344B5.2 1769 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132175926 132176326 132176076 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00963 67404 CAGE HCC1806 hg19 FANTOM5 1.64812541159699 chr9 132244062 132244824 132244277 Y NA LINC00963 NA NA NA NA LINC00963 332 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132459422 132459648 132459595 Y NA PRRX2 NA NA NA NA PRRX2 33502 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132464908 132465166 132465090 Y C9orf50,PRRX2 PRRX2,PTGES NA NA NA NA PRRX2 38988 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132494076 132494377 132494232 Y NA PTGES NA NA NA NA PTGES 18949 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr9 132512351 132512751 132512561 Y PTGES PTGES NA NA NA NA PTGES 575 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132707337 132707718 132707526 Y NA NA NA NA NA NA FNBP1 95755 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132785309 132785843 132785545 Y USP20,USP20,FNBP1 FNBP1,GPR107 NA NA NA NA FNBP1 17630 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 132963704 132964128 132963904 Y NCS1 NCS1 NA NA NA NA NCS1 30847 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 133565449 133565699 133565571 Y NA RP11-57C19.2,EXOSC2,ABL1 NA NA NA NA EXOSC2 1409 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 134248752 134249121 134248943 Y AIF1L,POMT1,PRRC2B PRRC2B PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 18359 CAGE HCC1806 hg19 FANTOM5 1.177232436855 chr9 134882586 134882673 134882600 Y SETX,NTNG2,MED27 NA NA NA NA NA MED27 70622 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 136009131 136009458 136009277 Y GTF3C4,DDX31,TSC1,RALGDS RALGDS,GBGT1 NA NA NA NA RALGDS 27843 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr9 136235762 136236074 136236007 Y NA SURF6,MED22,RPL7A,SNORD36A,SURF2,SURF1,SURF4,C9orf96,REXO4 NA NA NA NA SURF4 4896 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 136739075 136739598 136739373 Y VAV2 NA NA NA NA NA VAV2 116128 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chr9 137221069 137221192 137221119 Y RXRA RXRA NA NA NA NA RXRA 14125 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 138348639 138348707 138348673 Y NA PPP1R26,MRPS2,C9orf116 NA NA NA NA PPP1R26 20218 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 138778583 138778765 138778659 Y KCNT1 CAMSAP1,RP11-432J22.2 NA NA NA NA CAMSAP1 18309 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 138884665 138885093 138884961 Y NA UBAC1 NA NA NA NA UBAC1 33439 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 139136338 139136616 139136467 Y QSOX2 QSOX2 NA NA NA NA QSOX2 651 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 139226120 139226391 139226244 Y CAMSAP1,LHX3,LHX3 GPSM1,DNLZ NA NA NA NA GPSM1 6188 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 139595249 139595639 139595357 Y SEC16A,FUT7,C9orf142,ANAPC2,ABCA2 AGPAT2,FAM69B,SNHG7 SNORA43,SNHG7 MCF7 ChIA-PET 22265404 FAM69B 9383 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chr9 140023869 140024391 140024239 Y NA MAN1B1,DPP7,MIR3621 GRIN1 K562 ChIA-PET 22265404 DPP7 16240 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 140134697 140134985 140134927 Y C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3 TPRN,TMEM203,NDOR1,RNF208,C9orf169,TUBB4B NA NA NA NA TUBB4B 1032 CAGE HCC1806 hg19 FANTOM5 0.941785949483996 chr9 140205908 140206072 140205991 Y NRARP NRARP NA NA NA NA NRARP 11205 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chr9 140565381 140565755 140565635 Y NRARP NA NA NA NA NA EHMT1 53937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 1326825 1327063 1326916 Y ASMTL,AKAP17A,CRLF2,CRLF2 NA NA NA NA NA CSF2RA 58630 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 3732525 3732707 3732561 Y NA NA NA NA NA NA PRKX 102876 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 9701264 9701389 9701313 Y NA NA NA NA NA NA SHROOM2 51107 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 10135057 10135251 10135239 Y NA CLCN4 NA NA NA NA CLCN4 12033 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 10587173 10587276 10587225 Y MID1 NA NA NA NA NA MID1 262497 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 12965371 12965491 12965432 Y NA TMSB4X NA NA NA NA TMSB4X 25736 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 12969061 12969258 12969197 Y TMSB4X,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 21969 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 12974184 12974672 12974538 Y TMSB4X,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 16555 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 13105363 13105695 13105563 Y TLR7,TLR8,TMSB4X NA TMSB4X,FAM9C MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMSB4X 114136 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 14262210 14262757 14262259 Y NA NA NA NA NA NA GEMIN8 216198 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 15493209 15493485 15493347 Y NA PIR NA NA NA NA PIR 16202 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 16769633 16769754 16769694 Y NA CTPS2,SYAP1,TXLNG NA NA NA NA TXLNG 32796 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 20283183 20283718 20283506 Y SH3KBP1,RPS6KA3 NA NA NA NA NA RPS6KA3 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 20998267 20998386 20998380 Y NA NA NA NA NA NA RPS6KA3 714744 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 22239204 22239352 22239279 Y NA NA NA NA NA NA SMS 282513 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 24027801 24028121 24027962 Y NA EIF2S3 NA NA NA NA EIF2S3 42712 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 30679380 30679764 30679404 Y NA FTLP2,GK NA NA NA NA GK 9904 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 39646201 39646652 39646229 Y NA GAPDHP1 NA NA NA NA GAPDHP1 811 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chrX 39865489 39865898 39865566 Y BCOR,BCOR NA NA NA NA NA BCOR 168684 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 39873339 39874259 39873676 Y NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 160323 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 39949495 39949781 39949700 Y NA NA NA NA NA NA BCOR 84801 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 39951266 39951579 39951437 Y NA NA NA NA NA NA BCOR 83003 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 39965558 39965902 39965820 Y BCOR,BCOR NA NA NA NA NA BCOR 68680 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 39968308 39968728 39968376 Y BCOR NA NA NA NA NA BCOR 65854 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 39968932 39969265 39969200 Y BCOR NA NA NA NA NA BCOR 65317 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 40032962 40033837 40033453 Y BCOR,CXorf38,BCOR BCOR NA NA NA NA BCOR 745 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 40749971 40750359 40750172 Y USP9X,ATP6AP2,CXorf38,MED14 RP11-77G22.2 USP9X,MED14 IMR90 Hi-C 24141950 RP11-77G22.2 14878 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 40869399 40869667 40869505 Y USP9X,ATP6AP2,CXorf38,MED14 NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 73221 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 40943673 40944218 40943773 Y CXorf38,MED14,DDX3X,USP9X USP9X NA NA NA NA USP9X 785 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 41182589 41182765 41182693 Y NA DDX3X DDX3X IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDX3X 7886 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 41413588 41413590 41413589 Y NA NA NA NA NA NA DDX3X 222937 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 41759638 41759871 41759773 Y NA CASK NA NA NA NA CASK 20845 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 43577926 43578322 43578048 Y NA NA NA NA NA NA MAOA 64459 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 43888590 43889088 43888779 Y EFHC2 NA NA NA NA NA EFHC2 311830 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chrX 44834978 44835378 44835063 Y NA NA NA NA NA NA KDM6A 104221 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 45557008 45557128 45557058 Y NA MIR221,MIR222 NA NA NA NA MIR221 46566 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 45702877 45703292 45703236 Y NA RP5-1158E12.3 NA NA NA NA RP5-1158E12.3 5628 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 46182516 46182747 46182636 Y NA RP1-30G7.2 NA NA NA NA RP1-30G7.2 2333 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chrX 48348956 48349364 48349102 Y PORCN,PORCN,FTSJ1 FTSJ1,PORCN,EBP,TBC1D25 NA NA NA NA PORCN 15986 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 48390158 48390246 48390210 Y NA PORCN,EBP,TBC1D25,RBM3 NA NA NA NA TBC1D25 5599 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 52004971 52005124 52005057 Y NA NA NA NA NA NA MAGED1 460868 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 52964244 52964539 52964367 Y TSPYL2,KDM5C,IQSEC2,FAM156A FAM156B NA NA NA NA FAM156B 45908 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 54207583 54207867 54207725 Y NA NA NA NA NA NA FAM120C 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 64818518 64818695 64818582 Y NA MSN MSN IMR90 Hi-C 24141950 MSN 12261 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 64891840 64892073 64891978 Y NA NA NA NA NA NA MSN 85583 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 68004355 68004677 68004478 Y NA SERBP1P1,EFNB1 NA NA NA NA SERBP1P1 3040 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 70401853 70402134 70401993 Y IL2RG,MED12,TAF1,OGT,CXCR3,NONO NA NA NA NA NA MED12 65447 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 73338544 73338621 73338582 Y NA NA NA NA NA NA USMG5P1 53104 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 73340869 73341139 73340910 Y RLIM NA NA NA NA NA USMG5P1 50586 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 85294512 85294785 85294645 Y CHM CHM NA NA NA NA CHM 5781 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 85339971 85340972 85340615 Y NA CHM NA NA NA NA CHM 39405 CAGE HCC1806 hg19 FANTOM5 2.82535784845199 chrX 92479084 92479478 92479382 Y NA RP13-88F20.1 NA NA NA NA RP13-88F20.1 1070 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 99913933 99914424 99914133 Y SYTL4,SYTL4 TSPAN6,SRPX2 NA NA NA NA SRPX2 16718 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 102063503 102063615 102063509 Y NA NA NA NA NA NA GPRASP2 98399 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 103953879 103954145 103953966 Y IL1RAPL2 NA NA NA NA NA IL1RAPL2 144883 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 106595212 106595632 106595477 Y NA NA NA NA NA NA NUP62CL 147542 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 106595667 106595822 106595802 Y NA NA NA NA NA NA NUP62CL 147997 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 106920003 106920801 106920325 Y TSC22D3,TSC22D3 NA TSC22D3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PRPS1 50266 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 106954265 106954667 106954451 Y TSC22D3,TSC22D3,ATG4A NA NA NA NA NA TSC22D3 63905 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 108883543 108883897 108883721 Y NA NA NA NA NA NA ACSL4 90735 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 110566693 110566855 110566742 Y PAK3,DCX,DCX,DCX NA NA NA NA NA EIF4BP7 295862 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 110688240 110688423 110688331 Y NA NA NA NA NA NA EIF4BP7 174294 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 110863259 110863845 110863518 Y NA EIF4BP7,ALG13 NA NA NA NA EIF4BP7 542 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 114819160 114819326 114819285 Y NA PLS3 NA NA NA NA PLS3 25659 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 115083189 115083554 115083375 Y NA NA NA NA NA NA RP11-761E20.1 0 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 119276319 119276451 119276385 Y FAM70A NA NA NA NA NA NKAPP1 100671 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 119619980 119620335 119620161 Y NA LAMP2 LAMP2 K562 ChIA-PET 22265404 LAMP2 18760 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 123796301 123796431 123796368 Y NA NA NA NA NA NA STAG2 704239 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 124340013 124340052 124340037 Y NA NA NA NA NA NA STAG2 1247951 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 125606277 125607115 125606755 Y NA MTND4P24 NA NA NA NA MTND4P24 1409 CAGE HCC1806 hg19 FANTOM5 2.35446487370999 chrX 128656237 128656454 128656444 Y NA SMARCA1,OCRL NA NA NA NA SMARCA1 760 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 129066097 129066492 129066260 Y NA UTP14A,BCORL1 NA NA NA NA UTP14A 28000 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 129219006 129219116 129219059 Y SASH3,ELF4,ELF4 ELF4 NA NA NA NA ELF4 23575 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 129400519 129400680 129400638 Y NA ZNF280C NA NA NA NA ZNF280C 193 CAGE HCC1806 hg19 FANTOM5 0.470892974741998 chrX 134718222 134718415 134718313 Y NA NA NA NA NA NA DDX26B 65638 CAGE HCC1806 hg19 FANTOM5 0.706339462112997 chrX 135940631 135940874 135940833 Y HTATSF1 RBMX,RP11-308D16.4 NA NA NA NA RBMX 20049 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 139855409 139855570 139855490 Y NA NA NA NA NA NA LDOC1 413740 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 139858514 139858763 139858620 Y NA NA NA NA NA NA LDOC1 410547 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 149862815 149863170 149863006 Y MTMR1 MTMR1 NA NA NA NA MTMR1 3380 CAGE HCC1806 hg19 FANTOM5 1.88357189896799 chrX 149863384 149863571 149863479 Y NA MTMR1 NA NA NA NA MTMR1 3949 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 149865562 149865927 149865671 Y NA MTMR1 NA NA NA NA MTMR1 6127 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 150152595 150153067 150152778 Y NA HMGB3,RPL19P21 NA NA NA NA HMGB3 5613 CAGE HCC1806 hg19 FANTOM5 0.235446487370999 chrX 152064300 152064566 152064432 Y NA NA CETN2,NSDHL MCF7 ChIA-PET 22265404 NSDHL 66789 CAGE HCC1806 hg19 FANTOM5 0.235446487370999