chr1	840753	841210	840812	Y	NA	SAMD11	NA	NA	NA	NA	SAMD11	17050	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	845485	845678	845582	Y	NA	SAMD11,NOC2L,KLHL17	NA	NA	NA	NA	SAMD11	12582	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	1265677	1265980	1265829	Y	NA	PUSL1,ACAP3,CPSF3L,GLTPD1,DVL1,AURKAIP1	NA	NA	NA	NA	GLTPD1	7541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	1343359	1343768	1343546	Y	NA	AURKAIP1,CCNL2,MRPL20,VWA1	NA	NA	NA	NA	MRPL20	2666	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	1706859	1707124	1707007	Y	NA	NADK	NA	NA	NA	NA	NADK	2772	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	1772108	1772256	1772158	Y	TMEM88B,ATAD3C,CALML6,PRKCZ	GNB1	NA	NA	NA	NA	GNB1	48239	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	1803114	1803303	1803274	Y	NA	GNB1,TMEM52	NADK	IMR90	Hi-C	24141950	GNB1	17192	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	1840449	1840835	1840668	Y	SKI,ATAD3B,C1orf70,MIB2,MIB2,PRKCZ,GABRD	GNB1,TMEM52	NA	NA	NA	NA	TMEM52	7877	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	2246556	2246763	2246722	Y	SKI	NA	NA	NA	NA	NA	MORN1	74383	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	2476299	2476723	2476453	Y	NA	PANK4,HES5,FAM213B	NA	NA	NA	NA	HES5	16615	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	2477415	2477971	2477660	Y	NA	PANK4,HES5,FAM213B	NA	NA	NA	NA	HES5	17731	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	2478276	2478817	2478474	Y	SKI,PANK4,TNFRSF14	PANK4,HES5,FAM213B	NA	NA	NA	NA	HES5	18592	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	2574343	2574764	2574705	Y	MORN1,PANK4,ACTRT2,MMEL1	NA	NA	NA	NA	NA	FAM213B	58413	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	3128621	3128847	3128817	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	240143	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	3233109	3233475	3233342	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	135515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	3521167	3521613	3521414	Y	NA	TPRG1L,TP73,WRAP73	NA	NA	NA	NA	TPRG1L	17953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	3582035	3582407	3582251	Y	WRAP73,TP73	TPRG1L,TP73,WRAP73	NA	NA	NA	NA	WRAP73	14710	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	3817648	3818071	3817969	Y	LRRC47	CEP104,DFFB,C1orf174	NA	NA	NA	NA	C1orf174	2791	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr1	6053603	6054107	6053839	Y	CHD5,KCNAB2,KCNAB2,KCNAB2,KCNAB2	NPHP4	NA	NA	NA	NA	NPHP4	3070	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	6221566	6221669	6221628	Y	PLEKHG5,CHD5	CHD5,RPL22	NA	NA	NA	NA	CHD5	16514	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	6301988	6302384	6302218	Y	NA	RPL22,ICMT,GPR153	NA	NA	NA	NA	ICMT	7956	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	6336471	6336830	6336716	Y	ZBTB48,PHF13,GPR153,ACOT7	ICMT,GPR153	GPR153	K562	ChIA-PET	22265404	GPR153	17436	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	6760819	6760983	6760901	Y	NA	DNAJC11	NA	NA	NA	NA	DNAJC11	835	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	7461964	7462325	7462107	Y	NA	NA	NA	NA	NA	NA	VAMP3	367004	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	7729547	7729971	7729640	Y	NA	NA	NA	NA	NA	NA	VAMP3	99358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	7764543	7764931	7764717	Y	PER3	NA	NA	NA	NA	NA	VAMP3	64398	CAGE	JHUCS-1	hg19	FANTOM5	10.8318093916402
chr1	7843556	7843653	7843585	Y	PER3	VAMP3,PER3	NA	NA	NA	NA	PER3	1176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8229904	8230047	8229996	Y	NA	RNU1-7P	ERRFI1,SLC45A1	IMR90	Hi-C	24141950	RNU1-7P	34610	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8450820	8451072	8450834	Y	RERE,RERE	NA	NA	NA	NA	NA	SLC45A1	74934	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8487656	8487917	8487791	Y	RERE	NA	NA	NA	NA	NA	SLC45A1	111770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8488165	8488317	8488222	Y	TNFRSF9,RERE	NA	NA	NA	NA	NA	SLC45A1	112279	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8499087	8499228	8499177	Y	NA	NA	NA	NA	NA	NA	SLC45A1	123201	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	8571636	8571856	8571737	Y	SLC45A1,RERE	NA	NA	NA	NA	NA	SLC45A1	195750	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8720526	8720683	8720608	Y	NA	NA	NA	NA	NA	NA	RERE	155019	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8721734	8722143	8721896	Y	NA	NA	NA	NA	NA	NA	RERE	153559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8810273	8810466	8810370	Y	NA	NA	NA	NA	NA	NA	RERE	65236	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8933581	8933925	8933847	Y	NA	ENO1-IT1,ENO1	NA	NA	NA	NA	ENO1-IT1	2141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	8953388	8953557	8953428	Y	NA	ENO1-IT1,ENO1	NA	NA	NA	NA	ENO1	16080	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	9355493	9355709	9355601	Y	NA	SPSB1	NA	NA	NA	NA	SPSB1	4554	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	9488839	9489227	9489154	Y	NA	NA	SPSB1,SLC25A33,H6PD,MIR34A,GPR157	IMR90	Hi-C	24141950	SLC25A33	108314	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr1	9889535	9889880	9889709	Y	KIF1B	CLSTN1	NA	NA	NA	NA	CLSTN1	6951	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	10269964	10270260	10269995	Y	RBP7,PGD,KIF1B	KIF1B	NA	NA	NA	NA	KIF1B	1101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	10723795	10723954	10723885	Y	NA	NA	NA	NA	NA	NA	CASZ1	130753	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	10745709	10746041	10745880	Y	NA	NA	NA	NA	NA	NA	CASZ1	108666	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	10816030	10816223	10816138	Y	CASZ1	CASZ1	NA	NA	NA	NA	CASZ1	38484	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	10926873	10927035	10926954	Y	NA	NA	PEX14,CASZ1,APITD1-CORT,C1orf127	IMR90	Hi-C	24141950	CASZ1	72166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	11218028	11218196	11218080	Y	NA	NA	NA	NA	NA	NA	EXOSC10	60090	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	11559549	11559947	11559917	Y	NA	PTCHD2	NA	NA	NA	NA	PTCHD2	22326	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	11761755	11762049	11761783	Y	PTCHD2,FBXO44,FBXO44,MAD2L2,C1orf187	FBXO44,FBXO2,FBXO6,MAD2L2,AGTRAP	NA	NA	NA	NA	MAD2L2	12048	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	11968510	11969143	11969021	Y	MTHFR,CLCN6,VPS13D,MIIP	KIAA2013,PLOD1	NA	NA	NA	NA	KIAA2013	15342	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	12100563	12100930	12100747	Y	NA	MIIP	NA	NA	NA	NA	MIIP	23040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	12589452	12589763	12589585	Y	NA	NA	NA	NA	NA	NA	DHRS3	85974	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	14029077	14029879	14029437	Y	PRDM2,PRDM2,PRDM2	PRDM2	NA	NA	NA	NA	PRDM2	4384	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	14054762	14055166	14054864	Y	PRDM2,PRDM2,PRDM2	PRDM2	NA	NA	NA	NA	PRDM2	30069	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	14087510	14087640	14087574	Y	NA	NA	NA	NA	NA	NA	PRDM2	62817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	15208206	15208308	15208257	Y	NA	NA	NA	NA	NA	NA	TMEM51	268720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	15519488	15519688	15519655	Y	NA	TMEM51	NA	NA	NA	NA	TMEM51	42460	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	15539906	15540096	15539975	Y	NA	NA	NA	NA	NA	NA	TMEM51	62878	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	15664580	15664866	15664723	Y	FBLIM1	NA	EFHD2,CTRC,CELA2A,CELA2B	IMR90	Hi-C	24141950	EFHD2	69525	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	15666999	15667145	15667070	Y	NA	NA	CTRC,EFHD2	IMR90	Hi-C	24141950	EFHD2	67246	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	15762061	15762268	15762214	Y	NA	EFHD2	NA	NA	NA	NA	EFHD2	27670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	15786440	15786713	15786642	Y	PLEKHM2,CTRC,CELA2A,CELA2B	NA	NA	NA	NA	NA	EFHD2	52049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	15946733	15946892	15946831	Y	EFHD2,CASP9,ZBTB17,SPEN,DDI2	RP4-680D5.2,CHCHD2P6,DDI2	NA	NA	NA	NA	DDI2	4738	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16175691	16176294	16176100	Y	NA	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	3049	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	16176617	16176801	16176705	Y	RSC1A1,C1orf64,SPEN	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	3975	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16209325	16209770	16209445	Y	NA	SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	36683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16212759	16213091	16212941	Y	EFHD2,PLEKHM2,ZBTB17,SPEN	SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	40117	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16227810	16227873	16227842	Y	C1orf64,SPEN	NA	NA	NA	NA	NA	RP11-169K16.9	55168	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16292565	16293101	16292653	Y	CASP9,PLEKHM2,SPEN,C1orf144,ZBTB17	ZBTB17	SPEN	IMR90	Hi-C	24141950	ZBTB17	7526	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16616866	16617180	16617023	Y	NA	NA	NA	NA	NA	NA	RSG1	55209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16677236	16677843	16677569	Y	ZBTB17,FBXO42	FBXO42	RSG1	IMR90	Hi-C	24141950	FBXO42	287	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16696032	16696399	16696223	Y	NA	FBXO42	NA	NA	NA	NA	FBXO42	19083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	16825333	16826291	16825792	Y	NA	RNU1-1	SPATA21,NECAP2,CROCCP3,NBPF1,CROCC	IMR90	Hi-C	24141950	RNU1-1	12489	CAGE	JHUCS-1	hg19	FANTOM5	8.49880429190233
chr1	17231253	17231704	17231392	Y	PADI4,PADI2	NA	CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MFAP2	73626	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr1	17240188	17240783	17240515	Y	NA	NA	CROCC	K562	ChIA-PET	22265404	MFAP2	64547	CAGE	JHUCS-1	hg19	FANTOM5	5.66586952793489
chr1	17767804	17768710	17768126	Y	NA	RCC2	NA	NA	NA	NA	RCC2	3584	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	17865185	17865523	17865202	Y	ARHGEF10L	ARHGEF10L	NA	NA	NA	NA	ARHGEF10L	855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	17880613	17880854	17880734	Y	NA	ARHGEF10L	NA	NA	NA	NA	ARHGEF10L	16283	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	19271920	19272097	19272021	Y	NA	ALDH4A1,IFFO2	NA	NA	NA	NA	IFFO2	9083	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	19794978	19795283	19795050	Y	PLA2G2E,UBR4	CAPZB,RNU4-28P	NA	NA	NA	NA	CAPZB	14783	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	19803336	19803680	19803404	Y	TMCO4,UBR4	CAPZB,RNU4-28P	NA	NA	NA	NA	CAPZB	6386	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	19804974	19805167	19805055	Y	PLA2G2E	CAPZB,RNU4-28P	NA	NA	NA	NA	CAPZB	4899	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	20204786	20204981	20204970	Y	OTUD3	OTUD3	NA	NA	NA	NA	OTUD3	2025	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	20693127	20693202	20693146	Y	KIF17,PINK1	NA	NA	NA	NA	NA	CAMK2N1	117511	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	20993397	20993558	20993485	Y	NA	PINK1,DDOST	NA	NA	NA	NA	DDOST	7397	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	21149682	21149798	21149749	Y	CAMK2N1,EIF4G3	HP1BP3	NA	NA	NA	NA	HP1BP3	37866	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	21428050	21428147	21428101	Y	NA	RP11-487E1.2	NA	NA	NA	NA	RP11-487E1.2	29804	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	21475659	21476054	21476002	Y	EIF4G3,EIF4G3	EIF4G3	NA	NA	NA	NA	EIF4G3	25323	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	21476251	21476624	21476546	Y	NA	EIF4G3	NA	NA	NA	NA	EIF4G3	24753	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	21670382	21670956	21670695	Y	NA	ECE1	NA	NA	NA	NA	ECE1	385	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	21931612	21931850	21931825	Y	NA	NA	NA	NA	NA	NA	RAP1GAP	61951	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	22002610	22002786	22002701	Y	NA	RAP1GAP	RAP1GAP	K562	ChIA-PET	22265404	RAP1GAP	8809	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	22076024	22076450	22076245	Y	NA	USP48	RAP1GAP	IMR90	Hi-C	24141950	USP48	31649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	22651661	22651940	22651801	Y	NA	NA	C1QC,C1QB,CDC42,WNT4,C1QA,EPHA8	IMR90	Hi-C	24141950	ZBTB40	124404	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	22829217	22829453	22829426	Y	NA	NA	NA	NA	NA	NA	ZBTB40	52873	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	23123668	23124069	23123697	Y	NA	NA	NA	NA	NA	NA	EPHB2	88336	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	23589856	23590232	23590037	Y	NA	NA	KDM1A,HTR1D,LUZP1,LOC729059,HNRNPR,TCEA3,E2F2	IMR90	Hi-C	24141950	HNRNPR	78597	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	23669506	23669991	23669712	Y	NA	HNRNPR,ZNF436	NA	NA	NA	NA	HNRNPR	677	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	23748973	23749126	23749052	Y	NA	TCEA3	NA	NA	NA	NA	TCEA3	107	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	23881180	23881765	23881497	Y	NA	E2F2,ID3	E2F2	IMR90	Hi-C	24141950	ID3	2520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	24058728	24059093	24059048	Y	PNRC2	RPL11,TCEB3,PITHD1	RPL11,TCEB3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TCEB3	8552	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	24680333	24680598	24680466	Y	NA	GRHL3	NA	NA	NA	NA	GRHL3	36521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	24732584	24732754	24732709	Y	NA	NIPAL3	NA	NA	NA	NA	NIPAL3	7530	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	24970685	24970736	24970725	Y	NA	SRRM1	NA	NA	NA	NA	SRRM1	14478	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	25344029	25344296	25344110	Y	RUNX3,SYF2,C1orf63	NA	RUNX3	IMR90	Hi-C	24141950	RUNX3	54417	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	25352180	25352335	25352258	Y	RUNX3,SYF2,C1orf63	NA	RUNX3,C1orf63,SYF2	IMR90	Hi-C	24141950	RUNX3	62568	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	25559638	25560067	25559796	Y	RUNX3,SYF2,C1orf63	SYF2	NA	NA	NA	NA	SYF2	2645	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	25566195	25566411	25566257	Y	TMEM57	SYF2	SYF2	MCF7	ChIA-PET	22265404	SYF2	9202	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	25665993	25666367	25666180	Y	RUNX3,FAM54B,C1orf63	TMEM50A,C1orf63	NA	NA	NA	NA	C1orf63	3289	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	26201699	26201757	26201716	Y	SEPN1	RP1-125I3.2,MIR3917,STMN1	NA	NA	NA	NA	RP1-125I3.2	17595	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	26249033	26249281	26249192	Y	EXTL1,STMN1,STMN1,STMN1	MIR3917,STMN1	STMN1,PAFAH2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	STMN1	17551	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	26253326	26253427	26253373	Y	ZNF683,EXTL1,PAFAH2	MIR3917,STMN1	STMN1,PAFAH2	IMR90	Hi-C	24141950	STMN1	21844	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	26642014	26642169	26642069	Y	FAM54B,SH3BGRL3,RPS6KA1,HMGN2,UBXN11,UBXN11,CD52	SH3BGRL3,UBXN11	NA	NA	NA	NA	UBXN11	685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	26827232	26827869	26827508	Y	PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A	RP3-476K8.4,HMGN2	HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	HMGN2	30291	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr1	26933734	26933982	26933841	Y	SH3BGRL3,UBXN11,UBXN11,PIGV	NA	ARID1A,GPATCH3,RPS6KA1,ZDHHC18,GPN2,PIGV,SFN,C1orf172,NR0B2,NUDC	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ARID1A	86542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	26946837	26947249	26947076	Y	CATSPER4,UBXN11,UBXN11,PIGV,GPATCH3,ARID1A	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	73275	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	26947342	26948198	26947481	Y	SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	72326	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr1	27024638	27025138	27024825	Y	SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV	ARID1A	NA	NA	NA	NA	ARID1A	4114	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr1	27154485	27154771	27154729	Y	WDTC1,SLC9A1,RPS6KA1,ARID1A,PIGV,ZDHHC18	PIGV,ZDHHC18	NA	NA	NA	NA	ZDHHC18	3284	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	27191386	27191927	27191661	Y	FAM46B,C1orf172,HMGN2,RPS6KA1,SFN,NUDC,GPN2	ZDHHC18,GPN2,NUDC,GPATCH3	NA	NA	NA	NA	GPN2	22861	CAGE	JHUCS-1	hg19	FANTOM5	6.99901529921369
chr1	27321452	27321840	27321632	Y	TMEM222,TRNP1,FAM46B	RP11-344H11.4,TRNP1,FAM46B	NA	NA	NA	NA	TRNP1	3254	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	27383957	27384315	27384137	Y	GPR3	FAM46B	C1orf172,TRNP1,FAM46B,WDTC1,SLC9A1,TMEM222,SYTL1,GPR3,GPATCH3,NR0B2,FCN3,MAP3K6,CD164L2,AHDC1,IFI6,FGR,WASF2	IMR90	Hi-C	24141950	FAM46B	46630	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	27527451	27527688	27527509	Y	NA	SLC9A1,WDTC1	WDTC1,SLC9A1,C1orf172	IMR90	Hi-C	24141950	WDTC1	31319	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	27691785	27692261	27692091	Y	TMEM222,MAP3K6	TMEM222,SYTL1,MAP3K6,GPR3	NA	NA	NA	NA	MAP3K6	402	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	27854575	27854919	27854692	Y	SYTL1,FGR,FGR,FGR,FAM76A,C1orf38	WASF2	NA	NA	NA	NA	WASF2	39906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	27891553	27891803	27891694	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	37139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	27901397	27901604	27901422	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	27338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	27907931	27908052	27907995	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	20890	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	27916292	27916674	27916513	Y	XKR8,AHDC1	AHDC1	NA	NA	NA	NA	AHDC1	12268	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	27922522	27922947	27922946	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	5995	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	27924204	27924421	27924302	Y	XKR8,AHDC1	AHDC1	NA	NA	NA	NA	AHDC1	4521	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	27926949	27927449	27927117	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	1493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	28389248	28389585	28389551	Y	NA	EYA3	NA	NA	NA	NA	EYA3	23622	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	28573636	28574084	28573917	Y	NA	AL353354.1,DNAJC8,ATPIF1,SESN2	NA	NA	NA	NA	SESN2	9954	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr1	28576012	28576248	28576109	Y	STX12,C1orf38,EYA3,PTAFR,PTAFR,GMEB1,SESN2,MED18	DNAJC8,ATPIF1,SESN2	NA	NA	NA	NA	SESN2	7790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	29104880	29105053	29104930	Y	NA	YTHDF2,OPRD1	NA	NA	NA	NA	OPRD1	31601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	29195388	29195583	29195486	Y	OPRD1	EPB41	NA	NA	NA	NA	EPB41	16020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	29214759	29214998	29214903	Y	GMEB1,EPB41	EPB41	NA	NA	NA	NA	EPB41	3156	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	29451057	29451462	29451431	Y	TMEM200B,TMEM200B	TMEM200B	NA	NA	NA	NA	TMEM200B	2610	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	29503706	29504118	29503928	Y	NA	SRSF4	NA	NA	NA	NA	SRSF4	2381	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	29504261	29504387	29504317	Y	YTHDF2,YTHDF2,YTHDF2,EPB41,SRSF4	SRSF4	NA	NA	NA	NA	SRSF4	2112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	29517304	29517322	29517313	Y	NA	SRSF4,MECR,PTPRU	NA	NA	NA	NA	SRSF4	10805	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	29565515	29565732	29565598	Y	SRSF4,PTPRU	MECR,PTPRU	NA	NA	NA	NA	PTPRU	4487	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	30582865	30583057	30583002	Y	NA	NA	PTPRU,MECR	IMR90	Hi-C	24141950	RP1-65J11.1	712018	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	31222458	31222949	31222817	Y	NA	NA	NA	NA	NA	NA	RP1-65J11.1	72126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	31251287	31251533	31251452	Y	NA	RP1-65J11.1	LAPTM5,MECR,MATN1,LOC100129196,SNORD103A,SNORD103B,PUM1,SDC3	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP1-65J11.1	43542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	31483120	31483355	31483250	Y	NA	NA	NA	NA	NA	NA	PUM1	53483	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	31504221	31504603	31504488	Y	NA	PUM1	NA	NA	NA	NA	PUM1	32235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	31627566	31627958	31627874	Y	SDC3,HCRTR1,NKAIN1	NA	SNRNP40,PUM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	82443	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	31628220	31628457	31628359	Y	NA	NA	PUM1,NKAIN1,SERINC2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	81944	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	32108020	32108204	32108102	Y	NA	PEF1	NA	NA	NA	NA	PEF1	293	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	32966228	32966602	32966575	Y	FAM167B,MARCKSL1,KIAA1522,ZBTB8B,ZBTB8A	ZBTB8B,ZBTB8A	NA	NA	NA	NA	ZBTB8A	36426	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	33077721	33078012	33077949	Y	FNDC5	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	36492	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33082385	33082406	33082394	Y	ZBTB8B,ZBTB8A	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	32098	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33089029	33089046	33089038	Y	NA	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	25458	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33131314	33131452	33131383	Y	NA	ZBTB8OS,RBBP4,SYNC	NA	NA	NA	NA	RBBP4	16571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33438571	33438703	33438616	Y	KIAA1522,ADC	RNF19B	NA	NA	NA	NA	RNF19B	10285	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	33500817	33500865	33500842	Y	NA	AK2,ADC	NA	NA	NA	NA	AK2	43732	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33593963	33594340	33594180	Y	TRIM62	AK2,ADC	NA	NA	NA	NA	ADC	49258	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	33645848	33646140	33645995	Y	HPCA,PHC2,TRIM62	TRIM62	NA	NA	NA	NA	TRIM62	188	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33804359	33804743	33804679	Y	RNF19B,TRIM62,PHC2	AL513327.1	NA	NA	NA	NA	AL513327.1	41384	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	33829513	33829825	33829684	Y	FNDC5,ZSCAN20	NA	NA	NA	NA	NA	PHC2	64828	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr1	35294449	35294485	35294467	Y	NA	GJA4	NA	NA	NA	NA	GJA4	37850	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	35892196	35892421	35892350	Y	NA	NA	NA	NA	NA	NA	NCDN	128653	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	36173458	36173573	36173482	Y	TEKT2,EIF2C1	C1orf216	NA	NA	NA	NA	C1orf216	9500	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	36428229	36428381	36428320	Y	STK40,EIF2C4,THRAP3,EIF2C1,EIF2C3	NA	NA	NA	NA	NA	TEKT2	119295	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	36431149	36431388	36431272	Y	STK40,EIF2C4,EIF2C1,EIF2C3	NA	NA	NA	NA	NA	TEKT2	116288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	36555347	36555633	36555606	Y	STK40,SH3D21,EIF2C1,EIF2C3,ADPRHL2	TEKT2,ADPRHL2,COL8A2	NA	NA	NA	NA	ADPRHL2	2871	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	36592352	36592554	36592389	Y	NA	TEKT2,ADPRHL2,COL8A2,TRAPPC3,MAP7D1	NA	NA	NA	NA	COL8A2	3531	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	36849527	36849580	36849557	Y	EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,CSF3R	STK40,LSM10	NA	NA	NA	NA	STK40	30	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	37464724	37465074	37465012	Y	NA	GRIK3	NA	NA	NA	NA	GRIK3	32656	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	37721552	37721986	37721683	Y	NA	NA	NA	NA	NA	NA	LINC01137	216026	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	37942874	37943354	37943027	Y	YRDC,SNIP1,MTF1,ZC3H12A	LINC01137,ZC3H12A,MEAF6	NA	NA	NA	NA	ZC3H12A	4721	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	38203610	38203633	38203621	Y	NA	C1orf109,CDCA8,EPHA10	CDCA8,C1orf109	IMR90	Hi-C	24141950	EPHA10	25172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	38287158	38287399	38287321	Y	ZC3H12A,SNIP1,YRDC,MTF1	MANEAL,C1orf122,YRDC,MTF1	NA	NA	NA	NA	YRDC	15301	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	38308355	38308564	38308401	Y	ZC3H12A,SNIP1,MTF1	C1orf122,YRDC,MTF1	NA	NA	NA	NA	MTF1	14728	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	38312444	38312820	38312535	Y	ZC3H12A,SNIP1,YRDC,MTF1	C1orf122,YRDC,MTF1	NA	NA	NA	NA	MTF1	10472	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	38408316	38408623	38408470	Y	NA	INPP5B,SF3A3	NA	NA	NA	NA	INPP5B	2106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	38513959	38514335	38514147	Y	NA	FHL3,UTP11L,POU3F1	NA	NA	NA	NA	POU3F1	3509	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	39327096	39327575	39327204	Y	NA	RRAGC,RP5-864K19.4,MYCBP	NA	NA	NA	NA	RP5-864K19.4	3424	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	39508832	39509204	39509012	Y	NA	NDUFS5,MACF1	NA	NA	NA	NA	NDUFS5	18842	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	39516193	39516422	39516273	Y	NA	NDUFS5,MACF1	NA	NA	NA	NA	NDUFS5	26203	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	39547903	39548129	39548060	Y	BMP8A,MACF1	MACF1	NA	NA	NA	NA	MACF1	2915	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	39657786	39658129	39657912	Y	NA	NA	NA	NA	NA	NA	MACF1	112798	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	39736190	39736575	39736327	Y	NA	NA	NA	NA	NA	NA	KIAA0754	137576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	39791626	39791706	39791638	Y	NA	NA	NA	NA	NA	NA	KIAA0754	82445	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	39874208	39874673	39874342	Y	KIAA0754	KIAA0754	NA	NA	NA	NA	KIAA0754	57	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	40005546	40005959	40005647	Y	NA	PPIEL,PABPC4	NA	NA	NA	NA	PPIEL	16420	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	40628781	40629153	40628997	Y	NA	RLF	NA	NA	NA	NA	RLF	3736	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	40841336	40841595	40841379	Y	RLF,SMAP2,SMAP2,SMAP2,SMAP2	SMAP2	ZNF643	IMR90	Hi-C	24141950	SMAP2	32814	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	41495531	41495820	41495676	Y	NA	NA	NA	NA	NA	NA	CITED4	169513	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	41501440	41501773	41501639	Y	NA	NA	NA	NA	NA	NA	CITED4	175422	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	41501908	41501999	41501966	Y	SCMH1	NA	NA	NA	NA	NA	CITED4	175890	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	41633074	41633562	41633301	Y	SCMH1,SCMH1,SCMH1	NA	NA	NA	NA	NA	SCMH1	72264	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	41650800	41651168	41651109	Y	KCNQ4,SCMH1,SCMH1,SCMH1	NA	NA	NA	NA	NA	SCMH1	54658	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	41981831	41982007	41981926	Y	SLFNL1,SLFNL1	NA	NA	NA	NA	NA	FOXO6	156237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	42127851	42128791	42128091	Y	NA	NA	NA	NA	NA	NA	FOXO6	302257	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	42356899	42357259	42356906	Y	NA	NA	NA	NA	NA	NA	HIVEP3	142337	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	42934748	42935131	42934805	Y	CCDC30,RIMKLA	PPCS,ZMYND12,CCDC30,TMSB4XP1	NA	NA	NA	NA	CCDC30	7747	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	43884019	43884040	43884030	Y	ST3GAL3,MPL,SZT2	MED8,SZT2,HYI	NA	NA	NA	NA	SZT2	30466	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	44232152	44232509	44232262	Y	SLC6A9,IPO13,ST3GAL3	NA	NA	NA	NA	NA	ST3GAL3	62657	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	44240162	44240471	44240217	Y	ATP6V0B	NA	NA	NA	NA	NA	ST3GAL3	70667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	44428103	44428423	44428269	Y	SLC6A9,RNF220,IPO13	RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24	NA	NA	NA	NA	DPH2	5249	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	44430681	44431060	44430788	Y	NA	RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24	NA	NA	NA	NA	DPH2	2612	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	44452990	44453115	44453039	Y	NA	RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24,SLC6A9	NA	NA	NA	NA	CCDC24	1916	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	44495684	44496307	44495779	Y	NA	CCDC24,SLC6A9	B4GALT2	MCF7	ChIA-PET	22265404	SLC6A9	545	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	44689979	44690114	44690071	Y	NA	DMAP1	NA	NA	NA	NA	DMAP1	12852	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	44962677	44962982	44962698	Y	NA	NA	NA	NA	NA	NA	RNF220	93811	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	45167170	45167180	45167175	Y	NA	TMEM53,RNU5F-1,KIF2C	NA	NA	NA	NA	RNU5F-1	18394	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	45376274	45376331	45376304	Y	NA	NA	NA	NA	NA	NA	PTCH2	69539	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	45787067	45787234	45787139	Y	NA	ZSWIM5,HPDL,TOE1,MUTYH	NA	NA	NA	NA	HPDL	3311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	46102450	46102810	46102714	Y	NA	RP11-767N6.2,TMEM69,GPBP1L1	NA	NA	NA	NA	RP11-767N6.2	12688	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	46111666	46112048	46111975	Y	NA	RP11-767N6.2,TMEM69,GPBP1L1	NA	NA	NA	NA	RP11-767N6.2	3450	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	46573980	46574380	46574180	Y	TSPAN1,PIK3R3,PIK3R3	NA	NA	NA	NA	NA	PIK3R3	65780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	46575103	46575175	46575140	Y	PIK3R3,PIK3R3	NA	NA	NA	NA	NA	PIK3R3	64985	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	46955737	46955918	46955906	Y	DMBX1	NA	FAAH,DMBX1,MKNK1	IMR90	Hi-C	24141950	FAAH	97800	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	47800262	47800514	47800436	Y	NA	STIL,CMPK1	NA	NA	NA	NA	CMPK1	2793	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	48539473	48539610	48539596	Y	LOC388630	NA	NA	NA	NA	NA	RNU4-61P	371998	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	48710829	48711034	48710934	Y	NA	NA	NA	NA	NA	NA	RNU4-61P	200574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	49522549	49522595	49522572	Y	NA	NA	NA	NA	NA	NA	BEND5	281908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	49902417	49902596	49902507	Y	NA	NA	NA	NA	NA	NA	AGBL4	584989	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	49995089	49995393	49995241	Y	NA	NA	NA	NA	NA	NA	AGBL4	492192	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	50488527	50488851	50488838	Y	NA	AGBL4,ELAVL4	NA	NA	NA	NA	AGBL4	942	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	50580035	50580167	50580147	Y	NA	NA	NA	NA	NA	NA	ELAVL4	68349	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	51056997	51057361	51057215	Y	NA	NA	NA	NA	NA	NA	DMRTA2	169825	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	51083951	51084011	51083988	Y	NA	NA	NA	NA	NA	NA	DMRTA2	196779	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	51097851	51098184	51098018	Y	NA	NA	NA	NA	NA	NA	DMRTA2	210679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	51102056	51102361	51102067	Y	NA	NA	NA	NA	NA	NA	DMRTA2	214884	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	51245588	51245972	51245952	Y	NA	NA	NA	NA	NA	NA	FAF1	177963	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	51261727	51261870	51261800	Y	NA	NA	NA	NA	NA	NA	FAF1	162065	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	51312022	51312165	51312091	Y	NA	NA	NA	NA	NA	NA	FAF1	111770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	51475745	51476056	51475832	Y	NA	NA	NA	NA	NA	NA	CDKN2C	51328	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	51703075	51703494	51703244	Y	OSBPL9	RNF11	NA	NA	NA	NA	RNF11	3132	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	51809780	51810107	51809799	Y	NA	TTC39A	NA	NA	NA	NA	TTC39A	992	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	52088228	52088763	52088412	Y	NA	OSBPL9	NA	NA	NA	NA	OSBPL9	47377	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	52173889	52173954	52173921	Y	NA	NA	NA	NA	NA	NA	OSBPL9	133038	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	52390204	52390438	52390419	Y	NA	NRD1	NA	NA	NA	NA	NRD1	47727	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	52507951	52508154	52508101	Y	NA	KTI12,BTF3L4,TXNDC12	NA	NA	NA	NA	KTI12	10463	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	53703343	53703361	53703351	Y	NA	CPT2,C1orf123,MAGOH	NA	NA	NA	NA	MAGOH	1061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	53753056	53753164	53753096	Y	NA	LRP8	NA	NA	NA	NA	LRP8	38578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	54052889	54052991	54052940	Y	NA	NA	NA	NA	NA	NA	LRP8	261147	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	54261078	54261111	54261098	Y	NA	NA	NA	NA	NA	NA	YIPF1	93296	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	54441729	54442008	54441915	Y	NA	HSPB11,LRRC42	NA	NA	NA	NA	LRRC42	31979	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	54700132	54700688	54700499	Y	NA	CYB5RL	NA	NA	NA	NA	CYB5RL	36423	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	54766230	54766370	54766314	Y	SSBP3,SSBP3	NA	MRPL37,CYB5RL	IMR90	Hi-C	24141950	CYB5RL	102521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	54940444	54940824	54940607	Y	NA	NA	TMEM59,TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SSBP3	63292	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	54941776	54941995	54941811	Y	NA	NA	TMEM59,TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2	IMR90	Hi-C	24141950	ACOT11	63935	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	54953784	54954325	54954090	Y	SSBP3,SSBP3	NA	TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACOT11	51605	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	55594097	55594408	55594328	Y	NA	NA	PCSK9	IMR90	Hi-C	24141950	USP24	84378	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	56991269	56991531	56991390	Y	NA	NA	NA	NA	NA	NA	PPAP2B	117443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	57042744	57043185	57043024	Y	C8B,C8A,C1orf168,PPAP2B	NA	NA	NA	NA	NA	PPAP2B	65789	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	57043287	57044160	57043621	Y	PRKAA2,PPAP2B	NA	NA	NA	NA	NA	PPAP2B	64814	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	57873517	57873674	57873652	Y	NA	NA	NA	NA	NA	NA	RPS26P15	646478	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	57948146	57948309	57948229	Y	NA	NA	NA	NA	NA	NA	RPS26P15	571843	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	58002362	58002542	58002370	Y	NA	NA	NA	NA	NA	NA	RPS26P15	517610	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	58018702	58018981	58018745	Y	NA	NA	NA	NA	NA	NA	RPS26P15	501171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	58225769	58226165	58225967	Y	NA	NA	NA	NA	NA	NA	RPS26P15	293987	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	58231934	58231987	58231962	Y	DAB1	NA	NA	NA	NA	NA	RPS26P15	288165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	58303464	58303533	58303499	Y	DAB1	NA	NA	NA	NA	NA	RPS26P15	216619	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	58627790	58628022	58627831	Y	NA	NA	NA	NA	NA	NA	RPS26P15	107638	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	58900423	58900575	58900499	Y	NA	NA	DAB1,CYP2J2,OMA1,FGGY	IMR90	Hi-C	24141950	DAB1	109831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	59008745	59009101	59008916	Y	NA	DAB1,OMA1,TACSTD2	NA	NA	NA	NA	DAB1	1305	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	59281873	59282217	59282125	Y	MYSM1,FGGY,JUN	JUN	NA	NA	NA	NA	JUN	34088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	59608749	59609120	59609039	Y	NA	NA	NA	NA	NA	NA	FGGY	151190	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	59756067	59756566	59756452	Y	FGGY	FGGY	LOC100131060,HSD52,FGGY	IMR90	Hi-C	24141950	FGGY	3744	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	61333622	61333797	61333765	Y	NA	NFIA	INADL	IMR90	Hi-C	24141950	NFIA	4691	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr1	61369297	61369400	61369351	Y	NA	NFIA	NA	NA	NA	NA	NFIA	40366	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	61543611	61543877	61543752	Y	NFIA,NFIA,NFIA	NA	NA	NA	NA	NA	NFIA	214680	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	61549054	61549253	61549232	Y	NA	NA	NA	NA	NA	NA	NFIA	220123	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	61579491	61579639	61579512	Y	NA	NA	NA	NA	NA	NA	NFIA	250560	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	61583915	61584228	61583999	Y	NA	NA	NA	NA	NA	NA	NFIA	254984	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	61649786	61650305	61649984	Y	NFIA,NFIA,NFIA	NA	NA	NA	NA	NA	NFIA	320855	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	61662774	61662930	61662815	Y	NA	NA	NA	NA	NA	NA	NFIA	333843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	61784447	61784809	61784578	Y	NA	NA	NA	NA	NA	NA	TM2D1	404286	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	61918819	61919182	61919004	Y	NFIA,NFIA,NFIA	NA	NA	NA	NA	NA	TM2D1	269913	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	62726098	62726337	62726314	Y	NA	NA	NA	NA	NA	NA	KANK4	56748	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	62928310	62928608	62928459	Y	KANK4,USP1,USP1,ATG4C	USP1	NA	NA	NA	NA	USP1	28342	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	63022251	63022602	63022448	Y	NA	NA	NA	NA	NA	NA	USP1	122283	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	65383044	65383557	65383225	Y	JAK1	JAK1	NA	NA	NA	NA	JAK1	46630	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	65421731	65422136	65422135	Y	NA	JAK1	NA	NA	NA	NA	JAK1	8051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	65527577	65527856	65527728	Y	NA	RP4-535B20.1	AK4	K562	ChIA-PET	22265404	RP4-535B20.1	3564	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	65549780	65550082	65549919	Y	JAK1,LEPROT,LEPROT,LEPR	RP4-535B20.1	NA	NA	NA	NA	RP4-535B20.1	18360	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	65639675	65639734	65639705	Y	NA	AK4	NA	NA	NA	NA	AK4	28443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	65758796	65759173	65758995	Y	NA	DNAJC6	NA	NA	NA	NA	DNAJC6	46894	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	65775838	65775991	65775933	Y	PDE4B,DNAJC6	NA	NA	NA	NA	NA	DNAJC6	63936	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	65891768	65892129	65891951	Y	NA	LEPR,LEPROT	NA	NA	NA	NA	LEPROT	7498	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	65946781	65947169	65947001	Y	NA	NA	NA	NA	NA	NA	LEPROT	62511	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	67847773	67848018	67847895	Y	NA	SERBP1	NA	NA	NA	NA	SERBP1	46080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	67867795	67868154	67868057	Y	NA	SERBP1	NA	NA	NA	NA	SERBP1	25944	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	67883059	67883215	67883204	Y	NA	SERBP1	NA	NA	NA	NA	SERBP1	10883	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	67944536	67944823	67944680	Y	NA	NA	IL23R,IL12RB2,SERBP1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERBP1	50438	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	68234822	68235039	68234951	Y	NA	NA	NA	NA	NA	NA	GNG12	62111	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	68257818	68258216	68258148	Y	NA	GNG12	NA	NA	NA	NA	GNG12	38934	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	68572958	68573227	68573176	Y	NA	NA	NA	NA	NA	NA	DIRAS3	57644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	68657070	68657479	68657271	Y	NA	WLS	NA	NA	NA	NA	WLS	39324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	68961350	68961555	68961472	Y	NA	RPE65,DEPDC1	NA	NA	NA	NA	DEPDC1	446	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	70745994	70746088	70746040	Y	NA	NA	NA	NA	NA	NA	RP4-677H15.4	61288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	70746826	70747040	70746993	Y	ANKRD13C	NA	NA	NA	NA	NA	RP4-677H15.4	62120	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	71399907	71400234	71400028	Y	NA	NA	NA	NA	NA	NA	PTGER3	111257	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	72554223	72554508	72554339	Y	NA	NA	NA	NA	NA	NA	NEGR1	191909	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	72656240	72656592	72656532	Y	NA	NA	NA	NA	NA	NA	NEGR1	89825	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	72696545	72696864	72696705	Y	NA	NEGR1	NA	NA	NA	NA	NEGR1	49553	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	72749220	72749791	72749447	Y	NEGR1	NEGR1	NA	NA	NA	NA	NEGR1	2803	CAGE	JHUCS-1	hg19	FANTOM5	3.49950764960684
chr1	74970988	74971139	74971082	Y	NA	NA	NA	NA	NA	NA	C1orf173	166283	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	75182913	75182976	75182918	Y	NA	C1orf173,TYW3,CRYZ	NA	NA	NA	NA	TYW3	13860	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	75798807	75799079	75799068	Y	NA	NA	NA	NA	NA	NA	LHX8	206688	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	75972237	75972619	75972428	Y	NA	NA	NA	NA	NA	NA	SLC44A5	102182	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	76197113	76197244	76197179	Y	NA	ACADM	NA	NA	NA	NA	ACADM	9077	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	77165935	77166101	77166017	Y	NA	TPI1P1	ST6GALNAC3	IMR90	Hi-C	24141950	TPI1P1	2461	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	77385063	77385511	77385240	Y	ST6GALNAC5	NA	NA	NA	NA	NA	ST6GALNAC5	53937	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	77399446	77399567	77399507	Y	NA	NA	NA	NA	NA	NA	ST6GALNAC5	68320	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	77403313	77403685	77403438	Y	NA	NA	NA	NA	NA	NA	ST6GALNAC5	72187	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	77787155	77787455	77787305	Y	AK5,AK5	AK5	NA	NA	NA	NA	AK5	41419	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	78348123	78348428	78348274	Y	ZZZ3,FAM73A	NEXN	NA	NA	NA	NA	NEXN	3770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	78404062	78404594	78404354	Y	NA	FUBP1,DNAJB4	NA	NA	NA	NA	FUBP1	38200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	78423142	78423521	78423473	Y	NA	FUBP1,DNAJB4	NA	NA	NA	NA	FUBP1	19273	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	78441093	78441406	78441347	Y	NA	FUBP1,DNAJB4	NA	NA	NA	NA	FUBP1	1388	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	78557346	78557710	78557476	Y	NA	NA	NA	NA	NA	NA	DNAJB4	114487	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	79215772	79216132	79215819	Y	NA	NA	NA	NA	NA	NA	IFI44	102291	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	84120524	84120814	84120773	Y	PRKACB	NA	NA	NA	NA	NA	RP11-475O6.1	203892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	84289121	84289390	84289361	Y	SAMD13,SAMD13	RP11-475O6.1	NA	NA	NA	NA	RP11-475O6.1	35316	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	84710038	84710507	84710127	Y	NA	NA	NA	NA	NA	NA	PRKACB	168293	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	84971050	84971209	84971115	Y	MCOLN2,GNG5	RPF1,GNG5	NA	NA	NA	NA	GNG5	802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	85007374	85007584	85007581	Y	NA	GNG5,CTBS	NA	NA	NA	NA	CTBS	30579	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	85049005	85049203	85049109	Y	NA	CTBS	RPF1,GNG5	IMR90	Hi-C	24141950	CTBS	10842	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	85143846	85143980	85143979	Y	SAMD13,SAMD13,DNASE2B,DNASE2B,LPAR3,SSX2IP,SSX2IP	SSX2IP	NA	NA	NA	NA	SSX2IP	10506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	85248638	85248992	85248815	Y	NA	NA	GNG5,MCOLN2,TTLL7,LPAR3,PRKACB	IMR90	Hi-C	24141950	SSX2IP	94152	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	85643319	85643587	85643547	Y	NA	NA	MIR4423	IMR90	Hi-C	24141950	C1orf52	79768	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	87082786	87082842	87082814	Y	NA	NA	NA	NA	NA	NA	SH3GLB1	85417	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	87171187	87171726	87171422	Y	SH3GLB1	SH3GLB1	NA	NA	NA	NA	SH3GLB1	2928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	87190718	87190974	87190846	Y	NA	SH3GLB1	NA	NA	NA	NA	SH3GLB1	22459	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	87799623	87799998	87799801	Y	NA	LMO4	NA	NA	NA	NA	LMO4	7472	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	87800631	87801610	87800748	Y	NA	LMO4	NA	NA	NA	NA	LMO4	8480	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	89303069	89303193	89303134	Y	GBP4,GBP2,GTF2B	NA	NA	NA	NA	NA	GTF2B	52434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	89358212	89358439	89358316	Y	PKN2,CCBL2	GTF2B	NA	NA	NA	NA	GTF2B	2585	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	89382528	89382593	89382561	Y	NA	GTF2B	NA	NA	NA	NA	GTF2B	26901	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	89534473	89534797	89534533	Y	GTF2B,GBP5,GBP4,GBP1,GBP2	GBP3,GBP1	GBP1,GBP6	IMR90	Hi-C	24141950	GBP1	5430	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	89535751	89536015	89535898	Y	GTF2B,GBP3,GBP5,GBP4,GBP1,GBP2	GBP3,GBP1	GBP1,GBP6	IMR90	Hi-C	24141950	GBP1	6708	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	90032556	90032702	90032627	Y	LRRC8D,GBP2,LRRC8C,LRRC8B,LRRC8B	LRRC8B	NA	NA	NA	NA	LRRC8B	44161	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	90077145	90077551	90077320	Y	ZNF326,LRRC8C	LRRC8C	NA	NA	NA	NA	LRRC8C	19080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	90319744	90319959	90319950	Y	NA	LRRC8D	NA	NA	NA	NA	LRRC8D	35171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	90376424	90376756	90376561	Y	LRRC8D,LRRC8D,ZNF326	NA	NA	NA	NA	NA	GEMIN8P4	81124	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	91361231	91361653	91361295	Y	NA	RP4-665J23.1	NA	NA	NA	NA	RP4-665J23.1	46024	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	91472225	91472812	91472773	Y	NA	ZNF644	NA	NA	NA	NA	ZNF644	13017	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	91478571	91478975	91478771	Y	ZNF644,ZNF644	ZNF644	NA	NA	NA	NA	ZNF644	6854	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	91793812	91793887	91793849	Y	NA	NA	NA	NA	NA	NA	HFM1	74539	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92164446	92164626	92164554	Y	NA	NA	NA	NA	NA	NA	CDC7	200038	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92183243	92183457	92183382	Y	NA	NA	NA	NA	NA	NA	TGFBR3	186435	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92184014	92184251	92184134	Y	NA	NA	NA	NA	NA	NA	TGFBR3	185641	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92201825	92202076	92201951	Y	NA	NA	NA	NA	NA	NA	TGFBR3	167816	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92218581	92218971	92218958	Y	NA	NA	NA	NA	NA	NA	TGFBR3	150921	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	92255921	92256250	92256086	Y	NA	NA	NA	NA	NA	NA	TGFBR3	113642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92269494	92269966	92269778	Y	TGFBR3,RPAP2,GLMN	NA	NA	NA	NA	NA	TGFBR3	99926	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	92270160	92270686	92270504	Y	RPAP2,GLMN	NA	NA	NA	NA	NA	TGFBR3	99206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	93427945	93428408	93428079	Y	MTF2,DR1,FAM69A	FAM69A	NA	NA	NA	NA	FAM69A	2888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	93634565	93634982	93634927	Y	MTF2	CCDC18,TMED5	NA	NA	NA	NA	CCDC18	8494	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	93773027	93773315	93773230	Y	NA	DR1,RP4-717I23.3	NA	NA	NA	NA	DR1	36130	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	93806739	93807078	93807070	Y	NA	DR1,RP4-717I23.3	NA	NA	NA	NA	DR1	2367	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	93812976	93813243	93813111	Y	NA	DR1,RP4-717I23.3	NA	NA	NA	NA	RP4-717I23.3	3394	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	94021310	94021626	94021469	Y	NA	NA	NA	NA	NA	NA	FNBP1L	109622	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	94133922	94134283	94134103	Y	FNBP1L	NA	NA	NA	NA	NA	MIR760	176105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	95003688	95004160	95004042	Y	NA	F3	NA	NA	NA	NA	F3	1196	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	95388205	95388608	95388523	Y	NA	CNN3,RP4-639F20.1	NA	NA	NA	NA	CNN3	2226	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	95451299	95451544	95451422	Y	NA	NA	NA	NA	NA	NA	RP4-639F20.1	60177	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	95551114	95551338	95551185	Y	NA	ALG14,TMEM56	ALG14,TMEM56-RWDD3,SLC44A3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ALG14	14613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	95604801	95605035	95604918	Y	TMEM56,TMEM56-RWDD3	TMEM56	NA	NA	NA	NA	TMEM56	23907	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	96208080	96208328	96208204	Y	NA	NA	NA	NA	NA	NA	RP11-286B14.1	234408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	96502437	96502585	96502484	Y	NA	NA	NA	NA	NA	NA	EEF1A1P11	407901	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	97291085	97291340	97291213	Y	NA	NA	NA	NA	NA	NA	PTBP2	105864	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	97949201	97949316	97949277	Y	NA	NA	NA	NA	NA	NA	SEC63P1	59941	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	98011760	98012364	98012119	Y	NA	SEC63P1	NA	NA	NA	NA	SEC63P1	2503	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	98425688	98426065	98426013	Y	NA	DPYD	NA	NA	NA	NA	DPYD	41083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	98479796	98480152	98480044	Y	NA	MIR137HG	NA	NA	NA	NA	MIR137HG	33267	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	98606055	98606462	98606113	Y	NA	NA	NA	NA	NA	NA	MIR137HG	92636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	100502622	100502881	100502754	Y	NA	HIAT1	NA	NA	NA	NA	HIAT1	969	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	100820585	100820838	100820683	Y	HIAT1,CDC14A	CDC14A	NA	NA	NA	NA	CDC14A	12001	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	100859593	100859940	100859621	Y	HIAT1,CDC14A	NA	NA	NA	NA	NA	CDC14A	51009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	100966297	100966321	100966309	Y	NA	GPR88	NA	NA	NA	NA	GPR88	35372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	100996437	100996829	100996661	Y	SLC30A7,SLC30A7	GPR88	NA	NA	NA	NA	GPR88	4864	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	101392986	101393260	101393033	Y	S1PR1,SLC30A7,SLC30A7	EXTL2,SLC30A7	NA	NA	NA	NA	SLC30A7	33354	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	101485385	101485713	101485528	Y	NA	RP11-421L21.3,DPH5	NA	NA	NA	NA	RP11-421L21.3	3721	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	101486133	101486158	101486151	Y	NA	RP11-421L21.3,DPH5	NA	NA	NA	NA	RP11-421L21.3	3276	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	101725356	101725679	101725470	Y	SLC30A7,SLC30A7	S1PR1	NA	NA	NA	NA	S1PR1	24912	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	101757305	101757513	101757430	Y	NA	NA	SLC30A7,DPH5	IMR90	Hi-C	24141950	S1PR1	56861	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	102433894	102434100	102434094	Y	NA	OLFM3	NA	NA	NA	NA	OLFM3	26486	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	107314405	107314715	107314560	Y	NA	NA	NA	NA	NA	NA	PRMT6	282552	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	107684770	107685020	107684841	Y	NA	NTNG1	NA	NA	NA	NA	NTNG1	4141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	107727626	107727648	107727637	Y	NA	NTNG1	NA	NA	NA	NA	NTNG1	46997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	107731970	107732212	107732091	Y	NTNG1,NTNG1	NA	NA	NA	NA	NA	NTNG1	51341	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	107877234	107877506	107877370	Y	NA	NA	NA	NA	NA	NA	NTNG1	196605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	107891659	107891745	107891700	Y	NA	NA	NA	NA	NA	NA	NTNG1	211030	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	108122481	108123055	108122789	Y	NA	NA	NA	NA	NA	NA	VAV3	382711	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	108347574	108347600	108347587	Y	VAV3	NA	NA	NA	NA	NA	VAV3	158166	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	108485606	108485639	108485621	Y	NA	VAV3	NA	NA	NA	NA	VAV3	20127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	109104473	109104583	109104556	Y	PRPF38B,FAM102B	FAM102B	NA	NA	NA	NA	FAM102B	3762	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	109133637	109134097	109133761	Y	TMEM167B,STXBP3,PRPF38B,FAM102B	FAM102B	NA	NA	NA	NA	FAM102B	32926	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	109467804	109468470	109468110	Y	GPSM2,WDR47,SORT1,SORT1,PSRC1,CELSR2,CLCC1	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	35636	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	109469350	109469540	109469522	Y	NA	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	34566	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	109499781	109500180	109500079	Y	NA	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	3926	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	109572587	109572654	109572620	Y	NA	WDR47,TAF13	NA	NA	NA	NA	WDR47	10196	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	109784080	109784425	109784202	Y	NA	SARS,CELSR2,PSRC1	CELSR2	IMR90	Hi-C	24141950	CELSR2	6216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	109850258	109850620	109850439	Y	WDR47	PSRC1	NA	NA	NA	NA	PSRC1	26450	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	109928106	109928152	109928114	Y	NA	SORT1,PSMA5	NA	NA	NA	NA	SORT1	10421	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	110334849	110335164	110334977	Y	NA	NA	CSF1,FAM40A,GSTM4,AHCYL1,EPS8L3,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GSTM3	52465	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	110418068	110418377	110418223	Y	SORT1	CSF1	CSF1,AHCYL1,EPS8L3,GNAI3,CYB561D1,ATXN7L2	IMR90	Hi-C	24141950	CSF1	32487	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	110927812	110928210	110927883	Y	CD53,FAM40A,RBM15	RBM15,LAMTOR5-AS1,SLC16A4	NA	NA	NA	NA	SLC16A4	3494	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	111735691	111736003	111735892	Y	CD53,LRIF1,RAP1A,C1orf162	NA	NA	NA	NA	NA	DRAM2	54853	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	112163412	112163797	112163622	Y	C1orf183,C1orf183,C1orf162,RAP1A	NA	NA	NA	NA	NA	RAP1A	80572	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	112163826	112164071	112163877	Y	C1orf183,C1orf183,C1orf162,RAP1A	NA	NA	NA	NA	NA	RAP1A	80986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	112196411	112196803	112196596	Y	C1orf183,RAP1A	NA	NA	NA	NA	NA	DDX20	99064	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	112276731	112276883	112276807	Y	C1orf162,RAP1A,C1orf183,C1orf183	DDX20,FAM212B	NA	NA	NA	NA	DDX20	18984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	113013577	113014004	113013781	Y	CAPZA1	NA	NA	NA	NA	NA	CTTNBP2NL	76774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	113072370	113072489	113072380	Y	NA	NA	NA	NA	NA	NA	CAPZA1	87306	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	113932415	113932748	113932683	Y	NA	MAGI3	NA	NA	NA	NA	MAGI3	1044	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	114236415	114236760	114236542	Y	MAGI3	NA	NA	NA	NA	NA	PHTF1	63351	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	114326143	114326379	114326237	Y	HIPK1,HIPK1,HIPK1,AP4B1,PHTF1,RSBN1,PTPN22	PHTF1,RP5-1073O3.2,RSBN1	NA	NA	NA	NA	PHTF1	26032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	115052481	115052766	115052572	Y	BCAS2,TRIM33	TRIM33	NA	NA	NA	NA	TRIM33	700	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr1	117047053	117047428	117047164	Y	CD101,ATP1A1,ATP1A1,ATP1A1,CD58	NAP1L4P1	NA	NA	NA	NA	NAP1L4P1	27286	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117082797	117083071	117083005	Y	CD101,ATP1A1,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	NAP1L4P1	8083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117103380	117103518	117103480	Y	NA	NAP1L4P1,CD58	NA	NA	NA	NA	CD58	8143	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117110819	117111247	117111136	Y	NA	NAP1L4P1,CD58	NA	NA	NA	NA	CD58	414	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117111804	117112156	117112090	Y	TTF2,CD101,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	CD58	143	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117129425	117129671	117129544	Y	TTF2,CD58	CD58	NA	NA	NA	NA	CD58	17764	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117368438	117368774	117368618	Y	NA	NA	PTGFRN	K562	ChIA-PET	22265404	FTH1P22	52193	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117438713	117438773	117438743	Y	NA	PTGFRN	PTGFRN	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTGFRN	11906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	117493512	117493635	117493571	Y	NA	PTGFRN	CD101	IMR90	Hi-C	24141950	PTGFRN	42833	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	118153815	118153988	118153913	Y	FAM46C	FAM46C	NA	NA	NA	NA	FAM46C	7259	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	118302292	118302520	118302372	Y	NA	NA	GDAP2,FAM46C,MAN1A2,TRIM45	IMR90	Hi-C	24141950	FAM46C	155736	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	119401140	119401399	119401296	Y	NA	NA	NA	NA	NA	NA	TBX15	128780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	119506251	119506502	119506377	Y	NA	TBX15	NA	NA	NA	NA	TBX15	23677	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	119529353	119529528	119529441	Y	NA	TBX15	NA	NA	NA	NA	TBX15	651	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	120255895	120256325	120256050	Y	ADAM30	NA	NA	NA	NA	NA	PHGDH	55474	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	120275491	120275880	120275569	Y	ADAM30	NA	NA	NA	NA	NA	PHGDH	75070	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	120530218	120530524	120530431	Y	NOTCH2,FCGR1B,ZNF697	NA	NA	NA	NA	NA	NOTCH2	79716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	120530787	120531205	120531127	Y	NOTCH2,ZNF697	NA	NA	NA	NA	NA	NOTCH2	79035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	121154332	121154613	121154395	Y	NA	NA	NA	NA	NA	NA	EMBP1	104530	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	121485082	121485212	121485187	Y	NA	NA	NA	NA	NA	NA	EMBP1	225939	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	142538903	142539547	142539454	Y	NA	NA	NA	NA	NA	NA	NBPF8	1605261	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	144009977	144010738	144010098	Y	NA	NA	NA	NA	NA	NA	NBPF8	134070	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	144927217	144927550	144927432	Y	PDE4DIP,SEC22B,PDE4DIP,NOTCH2NL,NBPF10	RNU2-38P	NA	NA	NA	NA	RNU2-38P	15122	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	144993199	144993244	144993232	Y	NA	NA	NA	NA	NA	NA	RNU2-38P	50527	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	145000077	145000849	145000623	Y	NA	NA	NA	NA	NA	NA	RNU2-38P	57405	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	145030583	145030978	145030933	Y	NA	PDE4DIP	NA	NA	NA	NA	PDE4DIP	43208	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	145058996	145059322	145059204	Y	SEC22B,NOTCH2NL,NBPF10,PDE4DIP,PDE4DIP	PDE4DIP,SEC22B	NOTCH2NL,PDE4DIP,SEC22B,LOC653513,NBPF9	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PDE4DIP	14864	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	145396760	145397198	145397044	Y	NA	RP11-458D21.1,RNVU1-6,TXNIP	LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNVU1-6	16003	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	146774989	146775112	146775013	Y	NA	NA	NA	NA	NA	NA	FMO5	62289	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	147080043	147080251	147080097	Y	PRKAB2,CHD1L,BCL9	NA	NA	NA	NA	NA	ACP6	60367	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	147806841	147807184	147807140	Y	NA	RNU1-122P	NA	NA	NA	NA	RNU1-122P	1955	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr1	148000699	148000802	148000795	Y	NA	RNVU1-13	NA	NA	NA	NA	RNVU1-13	8553	CAGE	JHUCS-1	hg19	FANTOM5	2.66629154255759
chr1	149821015	149821647	149821349	Y	NA	HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB	NA	NA	NA	NA	HIST2H2AA4	372	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	149981648	149981889	149981683	Y	ANP32E,OTUD7B	OTUD7B	NA	NA	NA	NA	OTUD7B	1023	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	150135231	150135764	150135536	Y	PRPF3,MCL1,PLEKHO1	PLEKHO1	NA	NA	NA	NA	PLEKHO1	15858	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	150185878	150186128	150186012	Y	HIST2H2AC,VPS45,RPRD2,ANP32E	ANP32E,RNU2-17P	NA	NA	NA	NA	ANP32E	20376	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	150585815	150586394	150586132	Y	CDC42SE1,PLEKHO1,ANP32E,PRPF3,FAM63A,FAM63A,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	13694	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	151166314	151166527	151166421	Y	NA	SEMA6C,SCNM1,LYSMD1,VPS72,PIP5K1A	NA	NA	NA	NA	VPS72	517	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	151172142	151172526	151172243	Y	FAM63A,GABPB2,SNX27,POGZ,LYSMD1,LYSMD1,TMOD4	SCNM1,LYSMD1,VPS72,PIP5K1A	NA	NA	NA	NA	PIP5K1A	3717	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr1	151172620	151173197	151172669	Y	TMOD4	SCNM1,LYSMD1,VPS72,PIP5K1A	NA	NA	NA	NA	PIP5K1A	4195	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	151184646	151184728	151184696	Y	NA	LYSMD1,VPS72,PIP5K1A,PSMD4	NA	NA	NA	NA	PIP5K1A	16221	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	151868154	151868386	151868273	Y	NA	THEM4	NA	NA	NA	NA	THEM4	11898	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	151913815	151914271	151914054	Y	S100A10	THEM4	S100A10,CELF3,THEM4,RORC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	THEM4	33531	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	151918166	151918684	151918434	Y	NA	THEM4,S100A10	S100A10,CELF3,THEM4,RORC,S100A11	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	THEM4	37882	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	152025147	152025277	152025212	Y	NA	S100A11	THEM4,S100A11,TCHH,TCHHL1	MCF7,K562	ChIA-PET	22265404	S100A11	6764	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	153767353	153767730	153767624	Y	NA	SLC27A3	NA	NA	NA	NA	SLC27A3	22523	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	153929776	153930098	153929954	Y	NA	GATAD2B,CRTC2,CREB3L4,SLC39A1,JTB,RAB13,RPS27,RP11-422P24.9	NA	NA	NA	NA	CRTC2	675	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154154606	154155027	154154830	Y	SLC27A3,DENND4B,CRTC2,IL6R,ADAR,ADAR,UBAP2L,UBAP2L,TPM3	TPM3,UBAP2L,C1orf43	NA	NA	NA	NA	TPM3	10097	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	154359135	154359469	154359217	Y	GATAD2B,DENND4B,CRTC2,RPS27,UBAP2L,ATP8B2	IL6R	IL6R,ATP8B2,UBE2Q1	IMR90	Hi-C	24141950	IL6R	16200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154579303	154579782	154579555	Y	UBAP2L,IL6R,SHC1,ADAR,ADAR	UBE2Q1,CHRNB2,ADAR	NA	NA	NA	NA	ADAR	18693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154720589	154720696	154720649	Y	NA	NA	NA	NA	NA	NA	KCNN3	120060	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154728745	154728994	154728977	Y	NA	NA	NA	NA	NA	NA	KCNN3	111762	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	154783587	154784004	154783794	Y	NA	NA	NA	NA	NA	NA	KCNN3	56752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154973036	154973200	154973120	Y	CLK2,ADAR,ADAR,PYGO2,CKS1B,ZBTB7B,DCST1	PBXIP1,PYGO2,SHC1,FLAD1,ADAM15	NA	NA	NA	NA	ZBTB7B	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154973335	154973935	154973656	Y	ADAR,ADAR,MTX1,SHC1,ZBTB7B	PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	208	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	154977099	154977253	154977190	Y	ADAR,ADAR,ZBTB7B,DCST1	PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	3972	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	155064132	155064186	155064153	Y	NA	ADAM15,EFNA4,EFNA3,EFNA1,SLC50A1,DPM3	NA	NA	NA	NA	EFNA3	29908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	155164183	155164959	155164537	Y	NA	TRIM46,KRTCAP2,MIR92B,MTX1,THBS3,GBAP1,GBA	NA	NA	NA	NA	MIR92B	1215	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr1	155443130	155443303	155443253	Y	NA	NA	NA	NA	NA	NA	ASH1L-AS1	86518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	155496665	155497012	155496914	Y	DCST1,HCN3,YY1AP1,ASH1L	ASH1L-AS1,ASH1L	NA	NA	NA	NA	ASH1L-AS1	32809	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	155620238	155620623	155620432	Y	NA	DAP3,YY1AP1	NA	NA	NA	NA	DAP3	35128	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	155830201	155830522	155830413	Y	ASH1L,MEX3A,ARHGEF2,ARHGEF2	GON4L,SYT11,RIT1	ARHGEF2,RXFP4,SNORA42,RIT1,KIAA0907	IMR90	Hi-C	24141950	SYT11	2901	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	155944562	155945214	155944815	Y	C1orf182,C1orf61,SYT11,PAQR6,PAQR6	KIAA0907,ARHGEF2,SSR2	NA	NA	NA	NA	ARHGEF2	29647	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	155945743	155946196	155946108	Y	C1orf182,ASH1L,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,SLC25A44,RIT1,KIAA0907,ARHGEF2,ARHGEF2	KIAA0907,ARHGEF2,SSR2	RXFP4,KIAA0907	K562	ChIA-PET	22265404	ARHGEF2	28665	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	155946363	155946660	155946476	Y	ASH1L,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,SLC25A44,RIT1,KIAA0907,ARHGEF2,ARHGEF2	KIAA0907,ARHGEF2,SSR2	RXFP4,KIAA0907	K562	ChIA-PET	22265404	ARHGEF2	28201	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr1	156133837	156133883	156133860	Y	C1orf182,RHBG,HAPLN2,C1orf61,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,MEX3A,PAQR6,PAQR6	SLC25A44,PMF1-BGLAP,PMF1	NA	NA	NA	NA	SLC25A44	27997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156134935	156135401	156135063	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,RIT1,ARHGEF2,ARHGEF2	SLC25A44,PMF1-BGLAP,PMF1	NA	NA	NA	NA	SLC25A44	26479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156426931	156427503	156427197	Y	ARHGEF2,ARHGEF2,LMNA,SLC25A44,PMF1,C1orf182,SH2D2A,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	41117	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	156464458	156464805	156464586	Y	NA	MEF2D	NA	NA	NA	NA	MEF2D	3815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156474686	156475018	156474923	Y	SLC25A44,PMF1,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	6066	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156634807	156635020	156634939	Y	NES	CRABP2	NA	NA	NA	NA	CRABP2	38588	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156677217	156677612	156677436	Y	NA	CRABP2,RRNAD1,ISG20L2,MRPL24,PRCC	NA	NA	NA	NA	CRABP2	3609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156781780	156782101	156782026	Y	MEF2D,ETV3L,SH2D2A,SH2D2A,NTRK1	HDGF,NTRK1,INSRR	NA	NA	NA	NA	NTRK1	1331	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	156966343	156966626	156966486	Y	NA	ARHGEF11	NA	NA	NA	NA	ARHGEF11	46536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	157964633	157965029	157964831	Y	OR10T2	KIRREL	NA	NA	NA	NA	KIRREL	3570	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	157980631	157980890	157980708	Y	KIRREL	KIRREL	NA	NA	NA	NA	KIRREL	19568	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	157990877	157991211	157991044	Y	NA	KIRREL	NA	NA	NA	NA	KIRREL	29814	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	158119500	158119689	158119553	Y	NA	NA	LOC646268,KIRREL,AIM2	IMR90	Hi-C	24141950	KIRREL	158437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	158788454	158788632	158788567	Y	PYHIN1,IFI16,MNDA	NA	NA	NA	NA	NA	IFI16	179126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	159158093	159158524	159158429	Y	NA	CADM3	NA	NA	NA	NA	CADM3	18694	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	160182240	160182579	160182410	Y	NA	PEA15	NA	NA	NA	NA	PEA15	9113	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	160203977	160204039	160204035	Y	NA	PEA15,DCAF8	NA	NA	NA	NA	PEA15	30850	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	160242090	160242278	160242184	Y	NA	DCAF8,PEX19	NA	NA	NA	NA	DCAF8	10642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	160332348	160332525	160332392	Y	SLAMF7,IGSF9,NHLH1,VANGL2	NCSTN,COPA,NHLH1,VANGL2	NA	NA	NA	NA	NHLH1	2332	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr1	160344568	160344717	160344643	Y	NA	NCSTN,COPA,NHLH1,VANGL2	NA	NA	NA	NA	NHLH1	9711	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	160444087	160444465	160444324	Y	VANGL2	NA	NA	NA	NA	NA	VANGL2	75711	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	160639828	160639998	160639908	Y	NA	NA	NA	NA	NA	NA	RP11-312J18.5	222772	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	161170933	161171185	161171002	Y	ADAMTS4,NDUFS2	USP21,PPOX,B4GALT3,NDUFS2,ADAMTS4,TOMM40L	NA	NA	NA	NA	ADAMTS4	4087	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	161359666	161360218	161359899	Y	HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A	NA	NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SDHC	77619	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	161369073	161369991	161369486	Y	NA	NA	ADAMTS4,NDUFS2,APOA2,TOMM40L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SDHC	87026	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	161582212	161582506	161582417	Y	HSPA6,FCGR3A	NA	NA	NA	NA	NA	HSPA6	90176	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	161847357	161847565	161847361	Y	NA	NA	NA	NA	NA	NA	ATF6	113273	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	161973588	161973892	161973770	Y	FCGR2A,FCGR3A,OLFML2B	OLFML2B	NA	NA	NA	NA	OLFML2B	17752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	162657724	162657971	162657804	Y	NA	NA	NA	NA	NA	NA	DDR2	58561	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	162709795	162709973	162709884	Y	NOS1AP,DDR2	NA	NA	NA	NA	NA	DDR2	110632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	162729988	162730048	162730018	Y	NOS1AP,UHMK1	NA	NA	NA	NA	NA	C1orf110	106557	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	165204752	165205122	165204813	Y	RXRG	NA	NA	NA	NA	NA	LMX1A	118830	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	165205285	165205518	165205385	Y	RXRG	NA	NA	NA	NA	NA	LMX1A	118434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	165506688	165506898	165506768	Y	NA	NA	NA	NA	NA	NA	MGST3	91200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	165674774	165675083	165674866	Y	NA	ALDH9A1	NA	NA	NA	NA	ALDH9A1	8674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	166828089	166828463	166828188	Y	POU2F1,POGK	POGK,TADA1	NA	NA	NA	NA	TADA1	15101	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	167135568	167135867	167135776	Y	NA	RP11-277B15.1	CD247,POU2F1,GPA33	IMR90	Hi-C	24141950	RP11-277B15.1	5494	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	167191021	167191933	167191618	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	2955	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr1	167192959	167193266	167193111	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	4893	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	167440766	167441089	167440893	Y	POU2F1,RCSD1,CD247	NA	NA	NA	NA	NA	CREG1	79915	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	167486210	167486705	167486392	Y	POU2F1,RCSD1,CD247	CREG1	NA	NA	NA	NA	CREG1	34299	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	167570801	167571053	167570867	Y	POU2F1,RCSD1	CREG1,RCSD1	RCSD1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RCSD1	26277	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	167683554	167683813	167683605	Y	POU2F1,CREG1	MPZL1	NA	NA	NA	NA	MPZL1	4616	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	168050664	168051125	168050872	Y	SFT2D2	NA	NA	NA	NA	NA	GPR161	53696	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	168149052	168149361	168149233	Y	NA	GPR161,TIPRL,RPL34P1,SFT2D2	NA	NA	NA	NA	TIPRL	2881	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	168446219	168446589	168446402	Y	NA	NA	NA	NA	NA	NA	TBX19	197941	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	168582981	168583414	168583137	Y	NA	NA	ATP1B1,NME7,C1orf114,BLZF1	IMR90	Hi-C	24141950	TBX19	334703	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	169834996	169835276	169835168	Y	NA	SCYL3	NA	NA	NA	NA	SCYL3	26132	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	170635008	170635144	170635076	Y	PRRX1	PRRX1	NA	NA	NA	NA	PRRX1	5139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	170638824	170639138	170638981	Y	NA	PRRX1	NA	NA	NA	NA	PRRX1	8955	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	171102966	171103050	171103008	Y	NA	NA	NA	NA	NA	NA	FMO4	178297	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	171407653	171408026	171407772	Y	FMO4,PRRC2C	PRRC2C	PRRC2C	IMR90	Hi-C	24141950	PRRC2C	44625	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	172106187	172106635	172106273	Y	NA	MIR199A2,DNM3OS	NA	NA	NA	NA	MIR199A2	5149	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	172291507	172291926	172291559	Y	NA	NA	NA	NA	NA	NA	PIGC	119304	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	172312870	172313163	172313004	Y	NA	NA	NA	NA	NA	NA	PIGC	98067	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	172324588	172324814	172324670	Y	NA	NA	NA	NA	NA	NA	PIGC	86416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	173816933	173817269	173817101	Y	NA	DARS2,CENPL,ZBTB37,GAS5	NA	NA	NA	NA	ZBTB37	17951	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	173984193	173984403	173984298	Y	GPR52,ZBTB37,RC3H1	RC3H1	NA	NA	NA	NA	RC3H1	5032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	174375242	174375457	174375350	Y	NA	NA	NA	NA	NA	NA	RABGAP1L	248694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	174788416	174788807	174788447	Y	NA	NA	NA	NA	NA	NA	CACYBP	177493	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	175492766	175493084	175492925	Y	NA	NA	NA	NA	NA	NA	KIAA0040	332631	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	176024233	176024593	176024503	Y	NA	NA	NA	NA	NA	NA	RP11-318C24.1	135122	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	176058824	176059044	176058987	Y	NA	NA	NA	NA	NA	NA	RFWD2	115585	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	176079011	176079503	176079162	Y	NA	NA	NA	NA	NA	NA	RFWD2	95126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	176174471	176174980	176174673	Y	RFWD2	NA	NA	NA	NA	NA	RFWD2,RP11-195C7.1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	176786385	176786536	176786461	Y	NA	NA	NA	NA	NA	NA	ASTN1	345573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	177178348	177178736	177178542	Y	NA	ASTN1	NA	NA	NA	NA	ASTN1	46239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	178379281	178379736	178379396	Y	NA	NA	NA	NA	NA	NA	C1orf220	130151	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	178414274	178414285	178414280	Y	NA	NA	NA	NA	NA	NA	C1orf220	95602	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	179098871	179099008	179098957	Y	NA	NA	NA	NA	NA	NA	TOR3A	50359	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	179153644	179153909	179153868	Y	NA	ABL2	NA	NA	NA	NA	ABL2	42910	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	179726041	179726329	179726185	Y	TDRD5,FAM163A	FAM163A	NA	NA	NA	NA	FAM163A	15743	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	180371123	180371295	180371283	Y	NA	NA	NA	NA	NA	NA	ACBD6	98794	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	180895607	180895967	180895721	Y	NA	NA	NA	NA	NA	NA	STX6	94080	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	181069151	181069617	181069305	Y	NA	IER5	NA	NA	NA	NA	IER5	13513	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	181074349	181074924	181074645	Y	XPR1,IER5	IER5	NA	NA	NA	NA	IER5	18711	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	181104265	181104352	181104277	Y	NA	IER5	STX6,ACBD6,MR1,XPR1,KIAA1614,IER5	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IER5	48627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	181104473	181105818	181105427	Y	STX6,MR1,IER5	IER5	STX6,ACBD6,MR1,XPR1,KIAA1614,IER5	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IER5	48835	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr1	181998739	181999134	181998891	Y	GLUL,GLUL	NA	ZNF648	MCF7	ChIA-PET	22265404	GLUL	360207	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	182585205	182585710	182585424	Y	NA	RNASEL,RGS16	NA	NA	NA	NA	RGS16	13662	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	182854499	182854851	182854644	Y	NA	DHX9	NA	NA	NA	NA	DHX9	47995	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	183129116	183129507	183129296	Y	LAMC2	NA	LAMC2	IMR90	Hi-C	24141950	LAMC1	138521	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	183310808	183311127	183310994	Y	NA	NA	NA	NA	NA	NA	NMNAT2	74610	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	183557915	183558504	183558249	Y	SMG7,NCF2,NCF2,ARPC5	ARPC5,RGL1	NA	NA	NA	NA	ARPC5	44388	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	183836661	183836955	183836765	Y	RGL1,GLT25D2	NA	NA	NA	NA	NA	TSEN15	181856	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	183861530	183861762	183861690	Y	NCF2,NCF2,ARPC5	NA	NA	NA	NA	NA	TSEN15	157049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184005350	184005919	184005662	Y	RGL1,GLT25D2	TSEN15	RGL1	IMR90	Hi-C	24141950	TSEN15	12892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184033703	184034036	184033838	Y	NA	TSEN15	NA	NA	NA	NA	TSEN15	14892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184357629	184357933	184357738	Y	EDEM3	C1orf21	NA	NA	NA	NA	C1orf21	3437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184506061	184506260	184506127	Y	NA	NA	NA	NA	NA	NA	C1orf21	151869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184773428	184773803	184773695	Y	SWT1,SWT1,RNF2,FAM129A,EDEM3	NA	NA	NA	NA	NA	EDEM3	51381	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	184809721	184810151	184809898	Y	NA	NA	NA	NA	NA	NA	EDEM3	87674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184810330	184810429	184810414	Y	NA	NA	NA	NA	NA	NA	EDEM3	88283	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr1	184820980	184820991	184820986	Y	NA	NA	NA	NA	NA	NA	EDEM3	98933	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	184922808	184923031	184922923	Y	EDEM3,SWT1,SWT1,RNF2,IVNS1ABP,FAM129A	FAM129A	NA	NA	NA	NA	FAM129A	18651	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184924828	184925180	184925091	Y	IVNS1ABP,FAM129A	FAM129A	NA	NA	NA	NA	FAM129A	16502	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	184929910	184930144	184930114	Y	TRMT1L,SWT1,SWT1,IVNS1ABP,FAM129A	FAM129A	NA	NA	NA	NA	FAM129A	11538	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	185250433	185250655	185250484	Y	HMCN1,RNF2,SWT1,SWT1,IVNS1ABP	IVNS1ABP	NA	NA	NA	NA	IVNS1ABP	33806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	185253692	185254037	185253865	Y	HMCN1,RNF2,SWT1,SWT1,IVNS1ABP	IVNS1ABP	NA	NA	NA	NA	IVNS1ABP	30424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	185537736	185537864	185537792	Y	SWT1,SWT1	NA	SWT1,IVNS1ABP,MIR548F1,HMCN1	IMR90	Hi-C	24141950	IVNS1ABP	253275	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	185796352	185796554	185796468	Y	HMCN1	NA	NA	NA	NA	NA	IVNS1ABP	511891	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	186567965	186567976	186567970	Y	NA	NA	PLA2G4A	IMR90	Hi-C	24141950	PTGS2	79583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	187181531	187181740	187181636	Y	NA	NA	NA	NA	NA	NA	PLA2G4A	385446	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	192578246	192578789	192578443	Y	TROVE2,TROVE2,RGS1,RGS2	NA	UCHL5	IMR90	Hi-C	24141950	MIR4426	104524	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	192953303	192953614	192953465	Y	RGS2,CDC73,TROVE2,TROVE2	NA	NA	NA	NA	NA	TROVE2	72938	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	193726401	193726456	193726429	Y	NA	NA	NA	NA	NA	NA	B3GALT2	572617	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	196317530	196317735	196317633	Y	NA	NA	NA	NA	NA	NA	KCNT2	258620	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	196379497	196379989	196379846	Y	CFHR3,KCNT2,CFH	NA	NA	NA	NA	NA	KCNT2	196366	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	196687240	196687293	196687267	Y	NA	NA	NA	NA	NA	NA	CFH	68232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	198128112	198128944	198128293	Y	PTPRC,DENND1B	NEK7	NA	NA	NA	NA	NEK7	4019	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	198596624	198596783	198596704	Y	NA	NA	NA	NA	NA	NA	NEK7	472531	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	198845240	198845523	198845521	Y	NA	NA	NA	NA	NA	NA	RP11-104D3.2	508746	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	198850238	198850638	198850585	Y	PTPRC	NA	NA	NA	NA	NA	RP11-104D3.2	503631	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	198898987	198899513	198899179	Y	PTPRC	NA	NA	NA	NA	NA	RP11-104D3.2	454756	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	198903935	198904934	198904858	Y	PTPRC	NA	NA	NA	NA	NA	RP11-104D3.2	449335	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	200457893	200457983	200457938	Y	NA	NA	C1orf98,NR5A2	IMR90	Hi-C	24141950	ZNF281	80709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	200611653	200611882	200611754	Y	DDX59	KIF14,DDX59	NA	NA	NA	NA	KIF14	23791	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	200622357	200622464	200622411	Y	NA	KIF14,DDX59	NA	NA	NA	NA	DDX59	14633	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	200715755	200716027	200715890	Y	NA	CAMSAP2	NA	NA	NA	NA	CAMSAP2	9069	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	200783735	200784105	200783920	Y	NA	NA	NA	NA	NA	NA	CAMSAP2	77049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	200986349	200986762	200986562	Y	NA	KIF21B	NA	NA	NA	NA	KIF21B	4066	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201431088	201431253	201431176	Y	NA	PHLDA3,RP11-134G8.7,CSRP1	NA	NA	NA	NA	PHLDA3	5112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201449602	201449822	201449716	Y	LAD1	PHLDA3,RP11-134G8.7,CSRP1	PHLDA3	IMR90	Hi-C	24141950	PHLDA3	13237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201463619	201463933	201463776	Y	LMOD1,CSRP1,CSRP1,CSRP1	PHLDA3,RP11-134G8.7,CSRP1	NA	NA	NA	NA	RP11-134G8.7	10436	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201494461	201494578	201494476	Y	NA	RP11-134G8.7,CSRP1	NA	NA	NA	NA	CSRP1	17877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201508517	201509575	201509484	Y	NA	RP11-134G8.7,CSRP1	NA	NA	NA	NA	CSRP1	31933	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr1	201605860	201605966	201605934	Y	NA	NAV1	IPO9,NAV1,PHLDA3,CSRP1,RPS10P7	IMR90	Hi-C	24141950	NAV1	15449	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201613549	201613726	201613638	Y	NA	NAV1	NAV1,CSRP1,RPS10P7,IPO9	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	NAV1	23138	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201619383	201619798	201619705	Y	SHISA4,GPR37L1,NAV1	NAV1	NA	NA	NA	NA	NAV1	28972	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	201709797	201710423	201710148	Y	NA	NA	NA	NA	NA	NA	IPO9	85846	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	201711711	201712036	201711993	Y	NA	NA	NA	NA	NA	NA	IPO9	84233	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	202219033	202219251	202219134	Y	NA	NA	NA	NA	NA	NA	UBE2T	89857	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	202765097	202765528	202765162	Y	NA	RP11-480I12.2,KDM5B,PCAT6	NA	NA	NA	NA	KDM5B	11070	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	203101073	203101246	203101163	Y	NA	ADORA1	NA	NA	NA	NA	ADORA1	43291	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	203259429	203259985	203259729	Y	RABIF,KLHL12,ADIPOR1,ADIPOR1,BTG2	BTG2	NA	NA	NA	NA	BTG2	12634	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	203561987	203562359	203562082	Y	BTG2,ZC3H11A	ATP2B4	ATP2B4,OPTC,PRELP,FMOD,LAX1	IMR90	Hi-C	24141950	ATP2B4	31330	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	203624863	203625211	203625050	Y	BTG2	ATP2B4	NA	NA	NA	NA	ATP2B4	31174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204317952	204318184	204318134	Y	ETNK2,PIK3C2B	PLEKHA6	NA	NA	NA	NA	PLEKHA6	26609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204332438	204332553	204332500	Y	SOX13,PPP1R15B	PLEKHA6,PPP1R15B	NA	NA	NA	NA	PLEKHA6	12240	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204383374	204383435	204383377	Y	PPP1R15B	PLEKHA6,PPP1R15B	NA	NA	NA	NA	PPP1R15B	4455	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204386444	204387188	204386898	Y	PPP1R15B	PLEKHA6,PPP1R15B	NA	NA	NA	NA	PPP1R15B	7525	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204531285	204531644	204531490	Y	MDM4	MDM4	NA	NA	NA	NA	MDM4	47774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204653343	204653636	204653438	Y	PLEKHA6,TMEM81,NFASC,NFASC,LRRN2,LRRN2	LRRN2	NA	NA	NA	NA	LRRN2	482	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	204675739	204675945	204675909	Y	NA	LRRN2	LRRN2,NFASC	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	LRRN2	22878	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	204976101	204976640	204976291	Y	LRRN2,LRRN2,NFASC,TMEM81,TMCC2,KLHDC8A,DSTYK,CNTN2,CDK18,NFASC	CNTN2	NA	NA	NA	NA	CNTN2	33685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	205090261	205090406	205090392	Y	NA	RBBP5	CNTN2	IMR90	Hi-C	24141950	RBBP5	1118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	205218253	205218732	205218517	Y	NA	DSTYK,TMCC2	NA	NA	NA	NA	TMCC2	22949	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	205512470	205512827	205512691	Y	NA	CDK18,RNU2-19P	NA	NA	NA	NA	RNU2-19P	21017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	206748926	206749451	206749084	Y	IKBKE,RASSF5,MAPKAPK2,RASSF5,DYRK3	EIF2D	NA	NA	NA	NA	EIF2D	34453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	206763465	206763687	206763565	Y	MAPKAPK2,RASSF5	EIF2D,DYRK3	NA	NA	NA	NA	EIF2D	20217	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	206844225	206844341	206844283	Y	NA	DYRK3,MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	11948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	206859136	206859493	206859328	Y	IKBKE,RASSF5,RASSF5,MAPKAPK2	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	2847	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	208136912	208137268	208137107	Y	NA	NA	CD34,LOC148696,MIR29B2,MIR29C,PLXNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CD34	54165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	208314292	208314663	208314422	Y	NA	NA	NA	NA	NA	NA	PLXNA2	101002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	208349565	208349646	208349606	Y	NA	NA	NA	NA	NA	NA	PLXNA2	66019	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	208381145	208381344	208381321	Y	NA	PLXNA2	NA	NA	NA	NA	PLXNA2	34321	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	208415648	208415868	208415811	Y	NA	NA	NA	NA	NA	NA	PLXNA2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	208443226	208443424	208443350	Y	NA	PLXNA2	PLXNA2,CD34	IMR90	Hi-C	24141950	PLXNA2	27561	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	209538127	209538433	209538258	Y	LAMB3,LAMB3,IRF6,LOC642587	NA	MIR205HG	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ATP5G2P1	98559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	209591220	209591436	209591361	Y	LAMB3,LAMB3,IRF6,HSD11B1,LOC642587	NA	MIR205HG	IMR90	Hi-C	24141950	ATP5G2P1	151652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	209978699	209978810	209978755	Y	LAMB3,LAMB3,IRF6	C1orf74,DIEXF	NA	NA	NA	NA	DIEXF	20542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	211035320	211035533	211035504	Y	NA	NA	NA	NA	NA	NA	KCNH1	269924	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	211500826	211501119	211501083	Y	TRAF5,TRAF5	TRAF5	NA	NA	NA	NA	TRAF5	2869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	211688648	211688771	211688711	Y	NA	NA	NEK2,RCOR3,TRAF5,LINC00467,RD3,SLC30A1,INTS7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC30A1	61313	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	211837893	211837920	211837910	Y	NA	NEK2	NA	NA	NA	NA	NEK2	9040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	211925784	211926070	211925889	Y	NA	NA	NA	NA	NA	NA	LPGAT1	76044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	211950086	211950249	211950170	Y	NA	NA	NA	NA	NA	NA	LPGAT1	51865	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	211976591	211977124	211977068	Y	NA	LPGAT1	NA	NA	NA	NA	LPGAT1	24990	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	211988342	211989080	211989063	Y	PPP2R5A,PPP2R5A,LPGAT1	LPGAT1	NA	NA	NA	NA	LPGAT1	13034	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	211998326	211998558	211998442	Y	NA	LPGAT1	NA	NA	NA	NA	LPGAT1	3556	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	212182782	212182853	212182818	Y	NA	INTS7,DTL,RPL21P28	NA	NA	NA	NA	INTS7	24031	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	212291571	212291809	212291658	Y	PPP2R5A	NA	NA	NA	NA	NA	RPL21P28	68200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	212458080	212458253	212458113	Y	INTS7,PPP2R5A,PPP2R5A	PPP2R5A,RP11-384C4.3	NA	NA	NA	NA	PPP2R5A	1201	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	212513330	212513719	212513465	Y	PPP2R5A,PPP2R5A,TMEM206,TMEM206	RP11-384C4.3	NA	NA	NA	NA	RP11-384C4.3	32470	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	212731490	212732709	212732386	Y	NA	ATF3	ATF3	K562,MCF7	ChIA-PET	22265404	ATF3	3967	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr1	212896080	212896217	212896149	Y	NA	BATF3	NA	NA	NA	NA	BATF3	24753	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	212923712	212923837	212923822	Y	NA	NSL1,TATDN3	NA	NA	NA	NA	NSL1	39287	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	213101984	213102303	213102117	Y	VASH2	VASH2	FLVCR1,VASH2,TATDN3,NSL1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	VASH2	19559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	213152730	213153023	213152876	Y	BATF3,TATDN3,VASH2	VASH2,ANGEL2	NA	NA	NA	NA	VASH2	30868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	213160414	213160619	213160568	Y	VASH2	VASH2,ANGEL2	NA	NA	NA	NA	ANGEL2	26549	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	213443269	213443475	213443372	Y	NA	NA	NA	NA	NA	NA	RPS6KC1	220680	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	214162828	214163073	214162948	Y	PROX1	PROX1	NA	NA	NA	NA	PROX1	8304	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	214601098	214601566	214601506	Y	PTPN14	NA	NA	NA	NA	NA	PTPN14	122226	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	214619335	214619608	214619472	Y	NA	NA	NA	NA	NA	NA	PTPN14	104184	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	216774004	216774285	216774188	Y	ESRRG,ESRRG	NA	NA	NA	NA	NA	ESRRG	534812	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	217308487	217308861	217308605	Y	ESRRG	ESRRG	NA	NA	NA	NA	ESRRG	236	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	218338759	218338973	218338866	Y	NA	NA	ESRRG	IMR90	Hi-C	24141950	RRP15	117656	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	219263975	219264292	219264207	Y	NA	NA	NA	NA	NA	NA	TGFB2	746398	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	220359525	220359939	220359742	Y	NA	NA	NA	NA	NA	NA	MORF4L1P1	64973	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	220399770	220399931	220399853	Y	NA	MORF4L1P1,RAB3GAP2	NA	NA	NA	NA	MORF4L1P1	24981	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	220427006	220427444	220427299	Y	NA	MORF4L1P1,RAB3GAP2	NA	NA	NA	NA	MORF4L1P1	2094	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	220868801	220868862	220868831	Y	C1orf115,MOSC2,MOSC1	C1orf115	NA	NA	NA	NA	C1orf115	7614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	221882292	221882723	221882499	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	30795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	222163243	222163609	222163382	Y	NA	NA	DUSP10	IMR90	Hi-C	24141950	DUSP10	249725	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	222638782	222639204	222638963	Y	NA	NA	DUSP10,MIA3,AIDA,BROX	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-378J18.3	121963	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	223964690	223965055	223964731	Y	TP53BP2,FBXO28	NA	NA	NA	NA	NA	TP53BP2	66619	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	224012866	224013246	224013103	Y	NA	TP53BP2	NA	NA	NA	NA	TP53BP2	18428	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	224180261	224180516	224180350	Y	NA	NA	NA	NA	NA	NA	FBXO28	119273	CAGE	JHUCS-1	hg19	FANTOM5	6.33244241357429
chr1	224688435	224688713	224688487	Y	NA	NA	WDR26,CNIH3	IMR90	Hi-C	24141950	WDR26	65700	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	224690718	224691054	224690869	Y	WDR26	NA	CNIH3	IMR90	Hi-C	24141950	WDR26	67983	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	224691192	224691563	224691423	Y	NA	NA	CNIH3	IMR90	Hi-C	24141950	WDR26	68457	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	224750692	224750877	224750770	Y	NA	NA	CNIH3	IMR90	Hi-C	24141950	WDR26	127957	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	226222205	226222589	226222509	Y	H3F3A,C1orf55	H3F3A	H3F3A,C1orf55	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	H3F3A	24963	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	226297611	226298113	226297674	Y	NA	NA	ACBD3,C1orf55,H3F3A,LIN9	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	H3F3A	50059	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	226361229	226361382	226361305	Y	NA	ACBD3,MIXL1	NA	NA	NA	NA	ACBD3	11049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	226435130	226435332	226435236	Y	PARP1,LIN9,SRP9,PYCR2,H3F3A	MIXL1	NA	NA	NA	NA	MIXL1	25811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	226890865	226891416	226891300	Y	ITPKB	ITPKB-IT1,ITPKB	NA	NA	NA	NA	ITPKB-IT1	30097	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	227128899	227129131	227129032	Y	ADCK3	ADCK3	NA	NA	NA	NA	ADCK3	45662	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	228274281	228274680	228274319	Y	NA	ARF1,C1orf35,MRPL55	NA	NA	NA	NA	ARF1	5920	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	228633222	228633907	228633608	Y	TRIM11,TRIM17,HIST3H2A	TRIM11,RP11-245P10.4,TRIM17,HIST3H2A,HIST3H2BB,RNF187	NA	NA	NA	NA	HIST3H2A	9653	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	228678228	228678435	228678266	Y	NA	HIST3H2A,HIST3H2BB,RNF187	NA	NA	NA	NA	RNF187	5466	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	228686214	228686407	228686300	Y	NA	HIST3H2A,HIST3H2BB,RNF187	NA	NA	NA	NA	RNF187	13452	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	228783266	228783899	228783495	Y	C1orf35,TRIM11,HIST3H2A,RHOU	NA	NA	NA	NA	NA	RHOU	84925	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	228783962	228784250	228784107	Y	NA	NA	NA	NA	NA	NA	RHOU	84574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	228987774	228988279	228988087	Y	NA	NA	NA	NA	NA	NA	RHOU	118950	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	229409656	229409997	229409713	Y	RAB4A	RP5-1061H20.4,RAB4A	NA	NA	NA	NA	RAB4A	4834	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	229473732	229474385	229474330	Y	NA	NA	NA	NA	NA	NA	RAB4A	68910	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	229546837	229547142	229546975	Y	C1orf96,ACTA1	NA	NA	NA	NA	NA	NUP133	94961	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	230212552	230213069	230212856	Y	NA	GALNT2	NA	NA	NA	NA	GALNT2	21016	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	230248068	230248475	230248108	Y	NA	NA	NA	NA	NA	NA	GALNT2	56532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	230561990	230562633	230562303	Y	NA	NA	NA	NA	NA	NA	COG2	213602	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr1	230978470	230978520	230978495	Y	NA	C1orf198	NA	NA	NA	NA	C1orf198	24815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	231083969	231084208	231084171	Y	NA	TTC13,ARV1	NA	NA	NA	NA	TTC13	28413	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	231531776	231531955	231531804	Y	NA	EGLN1	NA	NA	NA	NA	EGLN1	26835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	231665787	231666093	231665981	Y	EXOC8,C1orf124,TSNAX	RP11-295G20.2,TSNAX	NA	NA	NA	NA	TSNAX	3388	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	232362022	232362384	232362201	Y	NA	NA	SIPA1L2,TSNAX-DISC1	IMR90	Hi-C	24141950	DISC1	601461	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	232735038	232735290	232735230	Y	NA	NA	TSNAX-DISC1	IMR90	Hi-C	24141950	RNU1-74P	230643	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	232746522	232746891	232746785	Y	NA	NA	TSNAX-DISC1,SIPA1L2	IMR90	Hi-C	24141950	RNU1-74P	219042	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	232765644	232766127	232765957	Y	NA	NA	TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2	IMR90	Hi-C	24141950	RNU1-74P	199806	CAGE	JHUCS-1	hg19	FANTOM5	10.6651661702304
chr1	233241853	233241955	233241904	Y	NA	NA	NA	NA	NA	NA	NTPCR	157502	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	234250535	234250574	234250556	Y	NA	NA	NA	NA	NA	NA	SLC35F3	211856	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	234559176	234559516	234559346	Y	NA	NA	NA	NA	NA	NA	RP5-827C21.4	51837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	234658291	234658851	234658374	Y	NA	TARBP1	NA	NA	NA	NA	TARBP1	45442	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	234659231	234659760	234659519	Y	IRF2BP2	TARBP1	NA	NA	NA	NA	TARBP1	46382	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	234680207	234680593	234680360	Y	NA	NA	LOC100506795,IRF2BP2	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	IRF2BP2	62678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	234746093	234747674	234747395	Y	IRF2BP2	IRF2BP2	NA	NA	NA	NA	IRF2BP2	2822	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	234748100	234748931	234748566	Y	IRF2BP2	IRF2BP2	NA	NA	NA	NA	IRF2BP2	4829	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	234812067	234812214	234812141	Y	NA	NA	LOC100506810,IRF2BP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IRF2BP2	68796	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	235390754	235391125	235391097	Y	NA	NA	NA	NA	NA	NA	RBM34	67982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	235484403	235484795	235484782	Y	NA	GGPS1,ARID4B,TBCE	NA	NA	NA	NA	GGPS1	3870	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	235668656	235669018	235668830	Y	RBM34,ARID4B,ARID4B	B3GALNT2	NA	NA	NA	NA	B3GALNT2	2875	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	235850857	235851038	235851012	Y	LYST,ARID4B	GNG4	NA	NA	NA	NA	GNG4	38803	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	236022682	236022818	236022763	Y	GPR137B,LYST	LYST	NA	NA	NA	NA	LYST	22122	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	236230188	236230739	236230327	Y	LYST,LGALS8,GPR137B	NID1	NID1	IMR90	Hi-C	24141950	NID1	3726	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	236231203	236231484	236231380	Y	NA	NID1	NID1	IMR90	Hi-C	24141950	NID1	4741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	236319808	236320415	236320177	Y	LYST,LGALS8,GPR137B	GPR137B	NA	NA	NA	NA	GPR137B	15976	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	236335410	236335565	236335488	Y	NA	GPR137B	NA	NA	NA	NA	GPR137B	31578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	236431064	236431243	236431072	Y	LGALS8,ERO1LB	ERO1LB	NA	NA	NA	NA	ERO1LB	12076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	238018736	238019136	238019066	Y	NA	NA	NA	NA	NA	NA	MTR	1062126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	238106545	238106849	238106747	Y	NA	NA	NA	NA	NA	NA	MTR	1149935	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	240306412	240306787	240306695	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	24668	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	240306890	240307603	240307416	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23852	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	240307621	240308162	240308005	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23293	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	240308207	240308537	240308375	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	22918	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	240397761	240398076	240397984	Y	GREM2	NA	NA	NA	NA	NA	ADH5P3	66306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	240874453	240874783	240874633	Y	NA	NA	FMN2,RPS7P5,GREM2,RGS7,FH	IMR90	Hi-C	24141950	RP11-467I20.3	76101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	241390681	241391063	241391027	Y	RGS7	NA	NA	NA	NA	NA	RGS7	127467	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	241441480	241441685	241441535	Y	NA	NA	NA	NA	NA	NA	RGS7	76845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	241696334	241697654	241696792	Y	KMO	FH	NA	NA	NA	NA	FH	15273	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	241781298	241781471	241781421	Y	NA	CHML	NA	NA	NA	NA	CHML	15761	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	242054721	242054907	242054820	Y	KMO	EXO1	NA	NA	NA	NA	EXO1	45452	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	243428005	243428394	243428166	Y	CEP170,SDCCAG8	CEP170,SDCCAG8	NA	NA	NA	NA	SDCCAG8	10685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	243806306	243806448	243806376	Y	NA	NA	NA	NA	NA	NA	AKT3	205933	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	243995795	243995860	243995825	Y	NA	AKT3	NA	NA	NA	NA	AKT3	16521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	244210956	244211944	244211575	Y	NA	NA	NA	NA	NA	NA	AKT3	198575	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	244212276	244213430	244213047	Y	NA	NA	NA	NA	NA	NA	AKT3	199895	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	244613820	244614139	244614120	Y	NA	ADSS,C1orf101	NA	NA	NA	NA	ADSS	384	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	245196282	245196669	245196476	Y	NA	NA	NA	NA	NA	NA	EFCAB2	65275	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	245563795	245563810	245563803	Y	KIF26B	NA	NA	NA	NA	NA	KIF26B	247508	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	245751114	245751532	245751334	Y	KIF26B	NA	NA	NA	NA	NA	KIF26B	434827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	245958364	245958743	245958685	Y	NA	NA	NA	NA	NA	NA	KIF26B	642077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246147829	246148201	246147973	Y	NA	NA	NA	NA	NA	NA	SMYD3	520413	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246323685	246324051	246324002	Y	NA	NA	NA	NA	NA	NA	SMYD3	344563	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	246387027	246387389	246387208	Y	NA	NA	NA	NA	NA	NA	SMYD3	281225	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246436053	246436378	246436216	Y	SMYD3,SMYD3	NA	NA	NA	NA	NA	SMYD3	232236	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	246469940	246470214	246470139	Y	NA	NA	NA	NA	NA	NA	SMYD3	198400	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246588477	246588670	246588563	Y	NA	NA	NA	NA	NA	NA	SMYD3	79944	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246730569	246731007	246730621	Y	AHCTF1,CNST	TFB2M,CNST	NA	NA	NA	NA	CNST	2823	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246760708	246760962	246760810	Y	SMYD3,CNST	TFB2M,CNST	NA	NA	NA	NA	CNST	32962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246763574	246763751	246763579	Y	NA	TFB2M,CNST	NA	NA	NA	NA	CNST	35828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	246948292	246948613	246948340	Y	NA	NA	NA	NA	NA	NA	SCCPDH	62943	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr1	247035132	247035504	247035470	Y	CNST,ZNF669,AHCTF1	NA	NA	NA	NA	NA	AHCTF1	57776	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr1	247093396	247093478	247093437	Y	NA	AHCTF1	NA	NA	NA	NA	AHCTF1	116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	247206107	247206337	247206222	Y	NA	ZNF695,ZNF670	NA	NA	NA	NA	ZNF670	33776	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr1	247295865	247296225	247296038	Y	ZNF695,ZNF670,ZNF669	ZNF669	NA	NA	NA	NA	ZNF669	30191	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	247297966	247298129	247298007	Y	NA	ZNF669	NA	NA	NA	NA	ZNF669	32292	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	247315116	247315371	247315289	Y	OR2G2,OR2G3,ZNF496,ZNF695,ZNF670,ZNF669	ZNF669,MIR3916	NA	NA	NA	NA	MIR3916	47991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	247325578	247326237	247325673	Y	NA	MIR3916	NA	NA	NA	NA	MIR3916	37125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	247326566	247327229	247326989	Y	NA	MIR3916	NA	NA	NA	NA	MIR3916	36133	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr1	248894360	248894532	248894495	Y	NA	NA	NA	NA	NA	NA	MIR3124	224044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr1	249157308	249157673	249157562	Y	OR14I1,ZNF672,ZNF692,ZNF692	MIR3124,SH3BP5L,ZNF672,ZNF692,PGBD2	NA	NA	NA	NA	ZNF692	5965	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	384217	384634	384602	Y	NA	NA	NA	NA	NA	NA	ZMYND11	205812	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	516106	516519	516355	Y	ZMYND11,ZMYND11,ZMYND11,ZMYND11,DIP2C	NA	NA	NA	NA	NA	DIP2C	217164	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	564401	564761	564664	Y	ZMYND11,ZMYND11	NA	NA	NA	NA	NA	DIP2C	168922	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	958233	958518	958406	Y	NA	LARP4B	DIP2C,GTPBP4,LARP4B	IMR90	Hi-C	24141950	LARP4B	17046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	1112826	1113160	1112997	Y	WDR37	IDI1,WDR37	NA	NA	NA	NA	WDR37	19348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3123873	3124204	3123982	Y	NA	PFKP	NA	NA	NA	NA	PFKP	17348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3438252	3438532	3438372	Y	NA	NA	LOC338588,LOC100216001	IMR90	Hi-C	24141950	PITRM1	225249	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3441336	3441600	3441518	Y	NA	NA	LOC338588,LOC100216001,KLF6	IMR90	Hi-C	24141950	PITRM1	228333	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3510310	3510716	3510597	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PITRM1	297307	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3513215	3513223	3513219	Y	NA	NA	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PITRM1	300212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3846443	3847038	3846804	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	20970	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3899382	3899877	3899626	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	73909	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	3984866	3985563	3985082	Y	KLF6	NA	KLF6,LOC100216001,LOC338588	IMR90	Hi-C	24141950	KLF6	159393	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	4289203	4289519	4289251	Y	NA	LINC00702	KLF6,LOC338588,LOC100216001	IMR90	Hi-C	24141950	LINC00702	5099	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	4375242	4375466	4375255	Y	NA	NA	NA	NA	NA	NA	LINC00702	91138	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	6087449	6087900	6087764	Y	IL15RA,PFKFB3,PFKFB3,RBM17,RBM17,IL2RA	RBM17	NA	NA	NA	NA	RBM17	41050	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	6090272	6090810	6090802	Y	IL15RA,PFKFB3,PFKFB3,RBM17,RBM17,IL2RA	RBM17	NA	NA	NA	NA	RBM17	38140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	6243287	6243821	6243659	Y	PFKFB3,PFKFB3	NA	NA	NA	NA	NA	PFKFB3	58406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	8662161	8662543	8662250	Y	NA	NA	NA	NA	NA	NA	TAF3	803694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	12195131	12195251	12195172	Y	CAMK1D	SEC61A2,CDC123,NUDT5	NA	NA	NA	NA	SEC61A2	25495	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	12306536	12306777	12306588	Y	UPF2,UPF2,SEC61A2,CAMK1D	NA	NA	NA	NA	NA	NUDT5	70393	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	12431599	12431849	12431667	Y	NA	CAMK1D	NA	NA	NA	NA	CAMK1D	42118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	13235342	13235711	13235527	Y	NA	MCM10	NA	NA	NA	NA	MCM10	33788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	13388296	13388525	13388411	Y	NA	PHYH	NA	NA	NA	NA	SEPHS1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	13924181	13924825	13924574	Y	NA	NA	NA	NA	NA	NA	PRPF18	297254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	14015733	14016130	14015958	Y	NA	NA	NA	NA	NA	NA	PRPF18	388806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	14051386	14052060	14051814	Y	PRPF18	NA	NA	NA	NA	NA	PRPF18	424459	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	14057086	14057314	14057246	Y	NA	NA	NA	NA	NA	NA	PRPF18	430159	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	14131369	14132062	14131667	Y	NA	NA	PRPF18	IMR90	Hi-C	24141950	FRMD4A	370079	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	14155606	14155791	14155699	Y	FRMD4A	NA	NA	NA	NA	NA	FRMD4A	346350	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	14161905	14162255	14161965	Y	NA	NA	NA	NA	NA	NA	FRMD4A	339886	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	14268918	14269186	14269140	Y	FRMD4A	NA	NA	NA	NA	NA	FRMD4A	232955	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	14624029	14624329	14624184	Y	DCLRE1C	NA	NA	NA	NA	NA	FRMD4A	121888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	14955590	14955884	14955736	Y	HSPA14,SUV39H2,SUV39H2,SUV39H2	SUV39H2,DCLRE1C,MEIG1	NA	NA	NA	NA	SUV39H2	36771	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	15158719	15159034	15158939	Y	NA	ACBD7,RPP38,NMT2	NA	NA	NA	NA	RPP38	21540	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	15178441	15178844	15178745	Y	NA	ACBD7,RPP38,NMT2	NA	NA	NA	NA	NMT2	29848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	15191044	15191371	15191092	Y	MEIG1,NMT2,C10orf111	NMT2	NA	NA	NA	NA	NMT2	17321	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	15278281	15278573	15278465	Y	NA	NA	NA	NA	NA	NA	NMT2	69589	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	15306901	15307170	15307036	Y	NA	NA	NA	NA	NA	NA	NMT2	98209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	15386960	15387149	15387011	Y	NMT2	FAM171A1	NA	NA	NA	NA	FAM171A1	23912	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	16946653	16946941	16946801	Y	NA	NA	NA	NA	NA	NA	RSU1	89126	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	17010242	17010673	17010572	Y	NA	NA	NA	NA	NA	NA	RSU1	152715	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	17755362	17755412	17755398	Y	SLC39A12	NA	NA	NA	NA	NA	STAM	71238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	18860767	18861138	18861132	Y	NA	RP11-499P20.2	NA	NA	NA	NA	RP11-499P20.2	28187	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	20446340	20446583	20446461	Y	NA	NA	NA	NA	NA	NA	PLXDC2	343172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	21389618	21389984	21389801	Y	NA	NA	NA	NA	NA	NA	MLLT10	431110	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	21816029	21816444	21816223	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	4650	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr10	22025175	22025497	22025336	Y	NA	NA	NA	NA	NA	NA	RN7SKP37	194575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	22029877	22030194	22029992	Y	MLLT10,MLLT10	NA	NA	NA	NA	NA	RN7SKP37	189878	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	22265792	22265961	22265887	Y	NA	RN7SKP37,DNAJC1	NA	NA	NA	NA	DNAJC1	24737	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	22725331	22726270	22725901	Y	NA	NA	NA	NA	NA	NA	BMI1	117191	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr10	22907073	22907416	22907362	Y	NA	NA	NA	NA	NA	NA	PIP4K2A	94068	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	22932994	22933290	22933224	Y	NA	NA	NA	NA	NA	NA	PIP4K2A	68194	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	22972039	22972536	22972328	Y	NA	PIP4K2A	NA	NA	NA	NA	PIP4K2A	28948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	23668667	23668935	23668803	Y	NA	NA	NA	NA	NA	NA	OTUD1	57263	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	24298317	24298326	24298320	Y	NA	NA	NA	NA	NA	NA	KIAA1217	316642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	24523625	24523951	24523689	Y	KIAA1217	NA	NA	NA	NA	NA	ARHGAP21	486646	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	24746901	24747210	24747047	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	263387	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	24858253	24858468	24858359	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	152129	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	24917417	24917574	24917542	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	93023	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	24993053	24993414	24993236	Y	GPR158,ARHGAP21	ARHGAP21	NA	NA	NA	NA	ARHGAP21	17183	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	25602421	25602556	25602489	Y	NA	NA	NA	NA	NA	NA	GPR158	140430	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	25724945	25725304	25725156	Y	NA	NA	NA	NA	NA	NA	GPR158	262954	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	25815030	25815346	25815189	Y	NA	NA	NA	NA	NA	NA	GPR158	353039	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	25975342	25975493	25975374	Y	NA	NA	NA	NA	NA	NA	GPR158	513351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	27531769	27532240	27532024	Y	ABI1,ANKRD26,YME1L1,MASTL,ACBD5	ACBD5	NA	NA	NA	NA	ACBD5	2710	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr10	28657201	28657375	28657297	Y	WAC	MPP7	MKX,ARMC4,MPP7	IMR90	Hi-C	24141950	MPP7	35786	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	29196228	29196432	29196257	Y	BAMBI	NA	BAMBI,LYZL1	IMR90	Hi-C	24141950	BAMBI	231957	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	29761620	29761743	29761682	Y	NA	NA	NA	NA	NA	NA	PTCHD3P1	65289	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	29944854	29945090	29945003	Y	SVIL	NA	NA	NA	NA	NA	PTCHD3P1	248523	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	31422679	31422989	31422772	Y	ZNF438,ZNF438	NA	ARHGAP12,ZEB1,ZNF438,ZEB1-AS1	IMR90	Hi-C	24141950	ZNF438	103813	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	31770032	31770371	31770202	Y	NA	NA	NA	NA	NA	NA	ZEB1-AS1	162656	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	31805465	31805855	31805582	Y	NA	NA	NA	NA	NA	NA	ZEB1-AS1	198089	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	31892273	31892723	31892643	Y	NA	NA	ZEB1	IMR90	Hi-C	24141950	ZEB1-AS1	284897	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	32038223	32038549	32038385	Y	NA	NA	ZNF438,ZEB1	IMR90	Hi-C	24141950	ARHGAP12	177193	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	32048872	32049424	32049213	Y	ZEB1,KIF5B	NA	ZNF438,ZEB1,ARHGAP12,LYZL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	166318	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr10	32335843	32336217	32336161	Y	NA	KIF5B	NA	NA	NA	NA	KIF5B	7142	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	32598255	32598442	32598434	Y	NA	NA	NA	NA	NA	NA	EPC1	67284	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	32626420	32626786	32626539	Y	NA	EPC1	NA	NA	NA	NA	EPC1	38940	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	32735821	32736068	32735865	Y	NA	CCDC7	C10orf68	MCF7	ChIA-PET	22265404	CCDC7	2753	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr10	33269452	33269916	33269602	Y	C10orf68	ITGB1	ITGB1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ITGB1	22804	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	33411139	33411539	33411218	Y	NA	NA	ITGB1	IMR90	Hi-C	24141950	ITGB1	118419	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	34439638	34439951	34439795	Y	NA	NA	NA	NA	NA	NA	RP11-8L18.3	511078	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	34613954	34614229	34614092	Y	NA	NA	NA	NA	NA	NA	RP11-8L18.3	336800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	34922261	34922558	34922409	Y	PARD3	RP11-8L18.3	NA	NA	NA	NA	RP11-8L18.3	28471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	35195075	35195256	35195166	Y	NA	SS18L2P1	PARD3	IMR90	Hi-C	24141950	SS18L2P1	32937	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	35438214	35438795	35438573	Y	CREM,CREM	NA	NA	NA	NA	NA	CUL2	60644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	35589038	35589427	35589190	Y	CREM,CREM,CREM,CREM,CCNY	NA	NA	NA	NA	NA	CCNY	55085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	35717658	35717859	35717796	Y	NA	NA	NA	NA	NA	NA	CCNY	183705	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	35848460	35848836	35848737	Y	NA	NA	NA	NA	NA	NA	MIR4683	79344	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	38264185	38264489	38264470	Y	ZNF37A,ZNF248,ZNF25	ZNF25,ZNF33A	NA	NA	NA	NA	ZNF25	624	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	38418230	38418599	38418292	Y	NA	ZNF37A	NA	NA	NA	NA	ZNF37A	36966	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	43633157	43633403	43633253	Y	RASGEF1A	CSGALNACT2	NA	NA	NA	NA	CSGALNACT2	1223	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr10	43817898	43817965	43817923	Y	NA	NA	ZNF487P	IMR90	Hi-C	24141950	HNRNPF	84649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	43950893	43951349	43951098	Y	NA	HNRNPF,RP11-517P14.2	NA	NA	NA	NA	RP11-517P14.2	36707	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr10	44046358	44046416	44046387	Y	NA	ZNF239	NA	NA	NA	NA	ZNF239	21650	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	44100382	44100859	44100681	Y	CSGALNACT2	ZNF239,CAP1P2,ZNF485,ZNF32	NA	NA	NA	NA	ZNF485	527	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	44363607	44363971	44363643	Y	NA	NA	NA	NA	NA	NA	ZNF32	221303	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	45470476	45470795	45470517	Y	NA	RASSF4,C10orf10,ZNF22,C10orf25	NA	NA	NA	NA	C10orf10	1463	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	47655672	47656071	47655889	Y	NA	NA	AGAP7	MCF7	ChIA-PET	22265404	ZNF488	696953	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	49598208	49598504	49598305	Y	NA	NA	MAPK8,ARHGAP22	IMR90	Hi-C	24141950	MAPK8	85510	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	50243711	50244078	50243895	Y	NA	NA	NA	NA	NA	NA	VSTM4	77476	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	50866815	50867027	50866949	Y	SLC18A3,CHAT,CHAT	C10orf53	NA	NA	NA	NA	C10orf53	18670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	51488946	51489392	51489137	Y	NCOA4,NCOA4,NCOA4	RP11-109G10.2	NA	NA	NA	NA	RP11-109G10.2	41180	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr10	52217733	52218081	52217894	Y	NA	NA	NA	NA	NA	NA	SGMS1	164842	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	61019605	61019954	61019626	Y	PHYHIPL,PHYHIPL,SLC16A9,FAM13C,FAM13C	NA	NA	NA	NA	NA	PHYHIPL	85255	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr10	61664562	61664999	61664893	Y	CCDC6	CCDC6	NA	NA	NA	NA	CCDC6	148	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	62307595	62307995	62307795	Y	ANK3	NA	NA	NA	NA	NA	ANK3	183253	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	62674070	62674082	62674076	Y	NA	NA	NA	NA	NA	NA	RHOBTB1	85116	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	63591158	63591311	63591235	Y	TMEM26,ARID5B	NA	RHOBTB1	IMR90	Hi-C	24141950	ARID5B	67748	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	63663540	63663817	63663641	Y	ARID5B	ARID5B	NA	NA	NA	NA	ARID5B	4481	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	64004719	64005076	64004899	Y	ARID5B	RTKN2	NA	NA	NA	NA	RTKN2	21390	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	64420095	64420329	64420212	Y	NA	NA	NA	NA	NA	NA	ADO	142187	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65016713	65017097	65017085	Y	NA	NA	NA	NA	NA	NA	NRBF2	125663	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65078433	65078736	65078637	Y	NA	NA	NA	NA	NA	NA	JMJD1C	144986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65078745	65079133	65078939	Y	NA	NA	NA	NA	NA	NA	JMJD1C	144589	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65097775	65098183	65098051	Y	NA	NA	NA	NA	NA	NA	JMJD1C	125539	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65196810	65197156	65196994	Y	NA	JMJD1C	NA	NA	NA	NA	JMJD1C	26566	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65269177	65269730	65269542	Y	NA	JMJD1C,REEP3	REEP3,JMJD1C,LOC84989	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	REEP3	9393	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	65388414	65388608	65388512	Y	NA	NA	NA	NA	NA	NA	REEP3	109291	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65389747	65390882	65390384	Y	NA	NA	NA	NA	NA	NA	REEP3	110624	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	65930110	65930546	65930307	Y	NA	NA	NA	NA	NA	NA	RP11-170M17.2	269105	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	68721315	68721864	68721513	Y	LRRTM3	LRRTM3	NA	NA	NA	NA	LRRTM3	37551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	68768720	68769021	68768921	Y	LRRTM3	NA	NA	NA	NA	NA	LRRTM3	84956	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	69523880	69524330	69524240	Y	NA	NA	NA	NA	NA	NA	DNAJC12	71594	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	69609160	69609390	69609211	Y	NA	DNAJC12,SIRT1	SIRT1	K562	ChIA-PET	22265404	DNAJC12	13236	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr10	69796463	69796828	69796573	Y	HERC4	HERC4	NA	NA	NA	NA	HERC4	36277	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	69822197	69822546	69822385	Y	NA	HERC4	NA	NA	NA	NA	HERC4	10559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	70782889	70783013	70782952	Y	NA	KIAA1279	NA	NA	NA	NA	KIAA1279	36402	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	71928097	71928630	71928606	Y	NA	AIFM2,TYSND1,CALM2P2	TYSND1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SAR1A	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	71984000	71984297	71984282	Y	NA	PPA1	NA	NA	NA	NA	PPA1	7370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	72117206	72117607	72117506	Y	NA	LRRC20,EIF4EBP2	NA	NA	NA	NA	LRRC20	22775	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	72165059	72165574	72165379	Y	NA	LRRC20,EIF4EBP2	NA	NA	NA	NA	EIF4EBP2	2924	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	72592079	72592231	72592146	Y	SGPL1	SGPL1	NA	NA	NA	NA	SGPL1	18362	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	72973788	72974249	72973953	Y	UNC5B	UNC5B,UNC5B-AS1	NA	NA	NA	NA	UNC5B-AS1	1736	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	73026177	73026397	73026262	Y	UNC5B	NA	NA	NA	NA	NA	UNC5B-AS1	50192	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	73489038	73489396	73489204	Y	PSAP,C10orf54	C10orf54	NA	NA	NA	NA	C10orf54	41859	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	73605642	73606023	73605974	Y	DDIT4,C10orf54,PSAP	PSAP	NA	NA	NA	NA	PSAP	3103	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	73725868	73726411	73726297	Y	C10orf105,CHST3	CHST3	NA	NA	NA	NA	CHST3	3745	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	73887320	73887439	73887380	Y	NA	SPOCK2	NA	NA	NA	NA	SPOCK2	40530	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	73986513	73986881	73986533	Y	C10orf105,C10orf54,CDH23,CDH23	ANAPC16,ASCC1,DDIT4	NA	NA	NA	NA	ASCC1	11621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74014911	74015029	74015003	Y	NA	ANAPC16,ASCC1,DDIT4	NA	NA	NA	NA	DDIT4	16649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74032298	74032943	74032475	Y	NA	DDIT4	NA	NA	NA	NA	DDIT4	620	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr10	74056833	74058104	74057179	Y	PSAP,DDIT4,DNAJB12	DDIT4	NA	NA	NA	NA	DDIT4	25155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74079380	74080359	74079580	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	32629	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	74080430	74080993	74080646	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	31995	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	74091661	74092150	74091920	Y	PSAP,DDIT4,DNAJB12	DNAJB12	NA	NA	NA	NA	DNAJB12	20838	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74289425	74289733	74289722	Y	NA	NA	NA	NA	NA	NA	MICU1	94166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74385233	74385288	74385261	Y	NA	MICU1,HMGN2P34	NA	NA	NA	NA	MICU1	1334	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74836640	74837022	74836864	Y	NA	P4HA1,NUDT13	NA	NA	NA	NA	P4HA1	17710	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74877758	74878048	74877901	Y	NA	P4HA1,NUDT13,FAM149B1,ECD	NA	NA	NA	NA	NUDT13	9541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	74925047	74925060	74925055	Y	ANXA7,ECD	FAM149B1,ECD	NA	NA	NA	NA	FAM149B1	864	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	75240023	75240096	75240089	Y	NA	RP11-137L10.6,PPP3CB	NA	NA	NA	NA	RP11-137L10.6	13187	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	75408900	75409185	75408963	Y	CAMK2G,TTC18,PPP3CB,USP54	AGAP5	NA	NA	NA	NA	AGAP5	46454	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	75725888	75726135	75726026	Y	NA	VCL	CAMK2G,AP3M1,VCL,NDST2,C10orf55,PLAU,ADK	IMR90	Hi-C	24141950	VCL	29737	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	76916394	76916800	76916595	Y	MYST4,SAMD8	NA	NA	NA	NA	NA	VDAC2	51112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	78271231	78271613	78271422	Y	NA	NA	NA	NA	NA	NA	C10orf11	912233	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	78770152	78770490	78770319	Y	NA	NA	NA	NA	NA	NA	KCNMA1	625863	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	78784039	78784371	78784322	Y	NA	NA	NA	NA	NA	NA	KCNMA1	611982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	78974815	78975138	78974939	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	421215	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	79291052	79291779	79291330	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	104574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	79383458	79383833	79383807	Y	NA	KCNMA1	NA	NA	NA	NA	KCNMA1	12520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	79538272	79538371	79538344	Y	NA	NA	NA	NA	NA	NA	KCNMA1	141919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	79632209	79632601	79632446	Y	NA	NA	NA	NA	NA	NA	DLG5	51777	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	79633336	79633510	79633397	Y	NA	NA	NA	NA	NA	NA	DLG5	50868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	79637463	79637788	79637654	Y	NA	DLG5	NA	NA	NA	NA	DLG5	46590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	79685177	79685609	79685373	Y	NA	DLG5	NA	NA	NA	NA	DLG5	799	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	80062995	80063366	80063293	Y	NA	NA	ZMIZ1,RPS24,LOC283050,LOC100132987,POLR3A	IMR90	Hi-C	24141950	LINC00856	56490	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	80166856	80166996	80166943	Y	NA	NA	LOC283050,ZMIZ1,RPS24,LOC100132987	IMR90	Hi-C	24141950	LINC00856	160351	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	80732492	80734123	80733460	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	92669	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	80830818	80831199	80831077	Y	ZMIZ1	ZMIZ1	NA	NA	NA	NA	ZMIZ1	4026	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	80908110	80909032	80908408	Y	NA	NA	NA	NA	NA	NA	ZMIZ1	81318	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	80911539	80911799	80911619	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	84747	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	80981088	80981226	80981157	Y	NA	NA	NA	NA	NA	NA	PPIF	123999	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	80998898	81000011	80999247	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	PPIF	105214	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	81027973	81028590	81028056	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	PPIF	76635	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	81034555	81034743	81034649	Y	ZMIZ1	NA	NA	NA	NA	NA	PPIF	70482	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	81104618	81104919	81104800	Y	ZMIZ1,PPIF	PPIF	NA	NA	NA	NA	PPIF	306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	81248199	81248547	81248259	Y	NA	ZCCHC24,EIF5AL1	ZCCHC24,PPIF	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	EIF5AL1	21810	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	82176099	82176325	82176238	Y	C10orf58	FAM213A,TSPAN14	NA	NA	NA	NA	FAM213A	10514	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	82207287	82207512	82207367	Y	NA	FAM213A,TSPAN14	NA	NA	NA	NA	TSPAN14	4410	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	82288045	82288198	82288158	Y	TSPAN14,SH2D4B	NA	NA	NA	NA	NA	TSPAN14	76123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	83712370	83712377	83712374	Y	NA	NA	NA	NA	NA	NA	NRG3	79300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	83724255	83724618	83724338	Y	NRG3,NRG3	NA	NA	NA	NA	NA	NRG3	91185	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	83813687	83814033	83813708	Y	NA	NA	NA	NA	NA	NA	NRG3	180617	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	84242793	84242947	84242870	Y	NA	NA	NA	NA	NA	NA	NRG3	609723	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	85609014	85609374	85609152	Y	NA	NA	NA	NA	NA	NA	HMGN2P8	229811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	86089822	86090305	86090054	Y	FAM190B	NA	NA	NA	NA	NA	GHITM	192626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	88004394	88004782	88004588	Y	NA	NA	NA	NA	NA	NA	GRID1	119468	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	88470805	88471213	88471023	Y	NA	LDB3,BMPR1A	NA	NA	NA	NA	BMPR1A	43194	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr10	88471893	88472403	88472354	Y	NA	LDB3,BMPR1A	NA	NA	NA	NA	BMPR1A	42004	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	89322777	89322992	89322885	Y	NA	NA	NA	NA	NA	NA	MINPP1	60145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	89519838	89520126	89519981	Y	NA	NA	NA	NA	NA	NA	CFL1P1	55559	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	90145688	90145942	90145819	Y	LIPK	NA	NA	NA	NA	NA	RP11-380G5.3	442429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	90759367	90759687	90759559	Y	NA	FAS,ACTA2	NA	NA	NA	NA	ACTA2	10220	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	91096041	91096297	91096218	Y	IFIT2,IFIT3,IFIT3,IFIT5,IFIT1	IFIT2,IFIT3	NA	NA	NA	NA	IFIT3	10390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	93254153	93254526	93254340	Y	NA	NA	NA	NA	NA	NA	HECTD2	86057	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	93283444	93283748	93283596	Y	HECTD2	NA	NA	NA	NA	NA	PPP1R3C	107063	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	93320562	93320757	93320661	Y	NA	NA	NA	NA	NA	NA	PPP1R3C	70054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	93432082	93432315	93432239	Y	NA	PPP1R3C	LOC100188947,HECTD2,TNKS2,RPP30,PPP1R3C	IMR90	Hi-C	24141950	PPP1R3C	41271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	94459466	94459797	94459609	Y	HHEX	HHEX	NA	NA	NA	NA	HHEX	13521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	95205346	95205630	95205524	Y	NA	MYOF,CEP55	NA	NA	NA	NA	MYOF	34444	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	95851610	95851772	95851690	Y	NA	NA	NA	NA	NA	NA	PLCE1	99864	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	96130414	96130532	96130435	Y	TBC1D12	NOC3L,TBC1D12	PLCE1,NOC3L	IMR90	Hi-C	24141950	NOC3L	9698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	97308667	97309047	97308880	Y	NA	SORBS1	NA	NA	NA	NA	SORBS1	10124	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	97809134	97809259	97809196	Y	NA	CCNJ,ENTPD1-AS1	NA	NA	NA	NA	CCNJ	7983	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	98638142	98638499	98638253	Y	NA	LCOR	NA	NA	NA	NA	LCOR	48125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	98956083	98956405	98956104	Y	C10orf62	SLIT1	NA	NA	NA	NA	SLIT1	12406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	99334341	99334704	99334523	Y	NA	HOGA1,PI4K2A	NA	NA	NA	NA	HOGA1	7376	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	99408797	99409067	99408957	Y	NA	MORN4,AVPI1	NA	NA	NA	NA	MORN4	17453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	100020230	100020246	100020237	Y	NA	NA	NA	NA	NA	NA	PYROXD2	152695	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	100153906	100154210	100154161	Y	NA	PYROXD2	NA	NA	NA	NA	PYROXD2	18731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	101170653	101170798	101170732	Y	SLC25A28	GOT1,RP11-441O15.3	NA	NA	NA	NA	GOT1	17583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	101381465	101381554	101381515	Y	NA	SLC25A28,ENTPD7	NA	NA	NA	NA	SLC25A28	3099	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	101475394	101475766	101475528	Y	NA	CUTC,COX15	NA	NA	NA	NA	COX15	14091	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	101754114	101754425	101754203	Y	ENTPD7,ERLIN1,ERLIN1,CWF19L1,CHUK,BLOC1S2,BLOC1S2,DNMBP	DNMBP	NA	NA	NA	NA	DNMBP	13251	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	103453403	103453880	103453587	Y	LDB1,BTRC,MGEA5	FBXW4	NA	NA	NA	NA	FBXW4	351	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	103708018	103708327	103708173	Y	NA	NA	NA	NA	NA	NA	C10orf76	105623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	103937930	103938271	103938070	Y	NA	PPRC1,NOLC1	NA	NA	NA	NA	NOLC1	27997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	104238092	104238376	104238328	Y	NA	CUEDC2,TMEM180,ACTR1A,SUFU	NA	NA	NA	NA	TMEM180	18943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	104401686	104402330	104401988	Y	NA	NA	NA	NA	NA	NA	TRIM8	0	CAGE	JHUCS-1	hg19	FANTOM5	3.16622120678714
chr10	104470539	104470788	104470556	Y	FBXL15	ARL3,SFXN2	NA	NA	NA	NA	ARL3	1376	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	104472705	104472855	104472743	Y	NA	ARL3,SFXN2	NA	NA	NA	NA	SFXN2	410	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	104533606	104534005	104533917	Y	NT5C2,NFKB2,NFKB2,NFKB2,C10orf32,C10orf26	NA	NA	NA	NA	NA	SFXN2	61311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	104909684	104910071	104909878	Y	NA	NT5C2	NA	NA	NA	NA	NT5C2	40985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	105409078	105409369	105409249	Y	NA	NA	NA	NA	NA	NA	CALHM2	198418	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	106440718	106441002	106440778	Y	NA	NA	NA	NA	NA	NA	CCDC147	329196	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	110671685	110671807	110671696	Y	NA	NA	NA	NA	NA	NA	XPNPEP1	1009504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	111650301	111650520	111650491	Y	NA	XPNPEP1	NA	NA	NA	NA	XPNPEP1	30791	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	112010766	112010816	112010791	Y	NA	MXI1	SMNDC1	IMR90	Hi-C	24141950	MXI1	45403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	112115007	112115281	112115101	Y	DUSP5	NA	SMC3,DUSP5,SMNDC1,RBM20	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SMNDC1	52298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	112186754	112186909	112186851	Y	SHOC2,DUSP5,BBIP1,BBIP1	NA	SMNDC1,DUSP5,SMC3	IMR90	Hi-C	24141950	DUSP5	68687	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	112668159	112668425	112668161	Y	NA	PDCD4,PDCD4-AS1,BBIP1,SHOC2,RPL13AP6	NA	NA	NA	NA	BBIP1	8607	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	112668861	112669237	112669049	Y	PDCD4,SHOC2,BBIP1,BBIP1	PDCD4,PDCD4-AS1,BBIP1,SHOC2,RPL13AP6	NA	NA	NA	NA	BBIP1	7795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	112674359	112675211	112674854	Y	NA	PDCD4,PDCD4-AS1,BBIP1,SHOC2,RPL13AP6	NA	NA	NA	NA	BBIP1	1821	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	114531236	114531374	114531260	Y	NA	NA	NA	NA	NA	NA	TCF7L2	176635	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	114929772	114930211	114930015	Y	TCF7L2	NA	NA	NA	NA	NA	TCF7L2	221763	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	115833736	115833994	115833865	Y	C10orf81	NA	NHLRC2,DCLRE1A	IMR90	Hi-C	24141950	C10orf118	97985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	116902844	116903191	116903017	Y	ATRNL1	NA	NA	NA	NA	NA	ATRNL1	51720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	117021659	117021668	117021663	Y	ATRNL1	NA	NA	NA	NA	NA	ATRNL1	170535	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	117502747	117502760	117502754	Y	NA	NA	NA	NA	NA	NA	GFRA1	528219	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	118034123	118034494	118034359	Y	GFRA1,GFRA1,GFRA1	GFRA1	NA	NA	NA	NA	GFRA1	3144	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	118500407	118500818	118500725	Y	NA	HSPA12A	NA	NA	NA	NA	HSPA12A	322	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	118643126	118643297	118643273	Y	KIAA1598	ENO4,RP11-539I5.1	NA	NA	NA	NA	RP11-539I5.1	35410	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	118656077	118656284	118656258	Y	NA	ENO4,RP11-539I5.1	NA	NA	NA	NA	RP11-539I5.1	48361	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	118714609	118714623	118714617	Y	NA	NA	NA	NA	NA	NA	RP11-539I5.1	106893	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	118926007	118926147	118926067	Y	VAX1	KIAA1598,VAX1	NA	NA	NA	NA	VAX1	30195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	119002073	119002141	119002099	Y	SLC18A2	SLC18A2	NA	NA	NA	NA	SLC18A2	3469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	119046334	119046783	119046648	Y	NA	SLC18A2	NA	NA	NA	NA	SLC18A2	47730	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	120591750	120591972	120591861	Y	NA	NA	C10orf46	IMR90	Hi-C	24141950	NANOS1	195256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	120968752	120969030	120968753	Y	EIF3A,GRK5	SFXN4,PRDX3,GRK5	NA	NA	NA	NA	GRK5	3651	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	121045137	121045528	121045521	Y	GRK5	NA	NA	NA	NA	NA	GRK5	80036	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	121415317	121415432	121415359	Y	GRK5,BAG3	RP11-179H18.5,BAG3	NA	NA	NA	NA	BAG3	6435	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	121829686	121829950	121829715	Y	NA	NA	NA	NA	NA	NA	NACAP2	74465	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	123526019	123526096	123526058	Y	NA	NA	NA	NA	NA	NA	ATE1-AS1	159731	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	123873239	123873409	123873290	Y	NA	NA	NA	NA	NA	NA	TACC2	126550	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	123914164	123914234	123914222	Y	NA	NA	NA	NA	NA	NA	TACC2	167475	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	123914446	123914761	123914722	Y	NA	NA	NA	NA	NA	NA	TACC2	167757	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	125730230	125730378	125730329	Y	NA	NA	NA	NA	NA	NA	CHST15	120828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	126212520	126212862	126212532	Y	NA	RPS10P18	NA	NA	NA	NA	RPS10P18	35373	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	126490996	126491131	126491100	Y	NA	METTL10,FAM175B	NA	NA	NA	NA	FAM175B	2642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	126717665	126717735	126717700	Y	NA	NA	ZRANB1	IMR90	Hi-C	24141950	RP11-298J20.4	113953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	126748587	126748846	126748786	Y	NA	NA	NA	NA	NA	NA	CTBP2	98893	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	126782105	126782284	126782195	Y	NA	NA	NA	NA	NA	NA	CTBP2	65455	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	128995351	128995518	128995467	Y	NA	FAM196A	NA	NA	NA	NA	FAM196A	2929	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	129893841	129894010	129893942	Y	NA	MKI67	NA	NA	NA	NA	MKI67	28639	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	130017279	130017540	130017352	Y	PTPRE	NA	EBF3,MGMT,LOC387723,GLRX3,CTAGE7P	IMR90	Hi-C	24141950	MKI67	94630	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	130339551	130339892	130339738	Y	NA	NA	NA	NA	NA	NA	MKI67	416902	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr10	131436691	131436981	131436883	Y	MGMT	NA	NA	NA	NA	NA	MGMT	173243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	131758339	131758817	131758766	Y	EBF3	EBF3	NA	NA	NA	NA	EBF3	1288	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	133763722	133764008	133763747	Y	NA	BNIP3	NA	NA	NA	NA	BNIP3	29427	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr10	133776164	133776302	133776237	Y	NA	BNIP3	NA	NA	NA	NA	BNIP3	17133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	134122010	134122092	134122081	Y	NA	STK32C,LRRC27	DPYSL4	IMR90	Hi-C	24141950	STK32C	21259	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr10	134349556	134349919	134349753	Y	JAKMIP3,NKX6-2,C10orf92,INPP5A	INPP5A	NA	NA	NA	NA	INPP5A	232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	134364689	134365427	134365071	Y	INPP5A	INPP5A	NA	NA	NA	NA	INPP5A	15365	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	134604468	134604559	134604513	Y	NA	NA	NA	NA	NA	NA	INPP5A	255144	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	135074691	135075148	135074934	Y	TUBGCP2,ADAM8	ZNF511,TUBGCP2	NA	NA	NA	NA	ZNF511	44831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	135191872	135192182	135191943	Y	NA	CALY,ECHS1,PAOX,MTG1	NA	NA	NA	NA	PAOX	1177	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr10	135205459	135205597	135205554	Y	C10orf92	ECHS1,PAOX,MTG1	NA	NA	NA	NA	MTG1	1	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	1404202	1404317	1404259	Y	IFITM10,DUSP8	BRSK2	TOLLIP,LOC255512,MUC5B,BRSK2,MOB2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BRSK2	4812	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	1412454	1412793	1412702	Y	NA	BRSK2	NA	NA	NA	NA	BRSK2	3325	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	1543133	1543339	1543203	Y	NA	DUSP8	NA	NA	NA	NA	DUSP8	47811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	1773349	1773482	1773395	Y	IFITM10	CTSD	NA	NA	NA	NA	CTSD	9740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	1805001	1805048	1805024	Y	NA	CTSD	MOB2,IFITM10,MIR4686,TH,IGF2,IGF2-AS1,INS-IGF2,KRTAP5-4,SYT8	IMR90,GM12878,H1ESC,HELA,K562,MCF7	Hi-C,5C,ChIA-PET	24141950,22955621,22265404	CTSD	21779	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	1935889	1936214	1936052	Y	IGF2,KRTAP5-3,TNNI2,TNNI2,TNNT3	MRPL23	NA	NA	NA	NA	MRPL23	30294	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	2669931	2670236	2670070	Y	INS,ASCL2,TRPM5	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	48988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	2717684	2718130	2717946	Y	TSSC4,TRPM5,KCNQ1	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	1094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	2913617	2913951	2913751	Y	NA	CDKN1C,SLC22A18,PHLDA2	NA	NA	NA	NA	SLC22A18	5000	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	2951529	2951649	2951619	Y	KCNQ1,PHLDA2	CDKN1C,SLC22A18,PHLDA2	NA	NA	NA	NA	PHLDA2	2844	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	2988914	2989223	2989024	Y	MRGPRG,SLC22A18	PHLDA2,NAP1L4	NA	NA	NA	NA	NAP1L4	22384	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	3035655	3035952	3035816	Y	MRGPRG	NAP1L4,RNU1-91P,CARS	NA	NA	NA	NA	NAP1L4	24048	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	3742975	3743362	3743342	Y	NA	NA	NA	NA	NA	NA	PGAP2	73592	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	3833340	3833454	3833393	Y	RRM1,NUP98,PGAP2,PGAP2,RHOG	PGAP2,NUP98,RHOG,STIM1	NA	NA	NA	NA	NUP98	16318	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	3880869	3881074	3880973	Y	NA	RHOG,STIM1	NA	NA	NA	NA	STIM1	7112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	6523174	6523531	6523244	Y	OR2D2	TRIM3,ARFIP2	NA	NA	NA	NA	ARFIP2	22508	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	6564206	6564247	6564227	Y	NA	NA	NA	NA	NA	NA	RRP8	58603	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	6665190	6665437	6665274	Y	NA	RRP8,ILK,TAF10,TPP1,DCHS1,MRPL17	NA	NA	NA	NA	DCHS1	9648	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	6667820	6668268	6668018	Y	OR6A2,DCHS1	RRP8,ILK,TAF10,TPP1,DCHS1,MRPL17	NA	NA	NA	NA	DCHS1	6817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	6676048	6676412	6676073	Y	OR52W1,APBB1,APBB1,TRIM3,OR2D2,OR2D3,ZNF214,DCHS1	TAF10,TPP1,DCHS1,MRPL17	NA	NA	NA	NA	DCHS1	963	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr11	6699628	6699937	6699850	Y	OR52W1,OR10A4,OR10A2,OR6A2,OR2AG1,OR2AG2	DCHS1,MRPL17	NA	NA	NA	NA	MRPL17	2695	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	7600846	7601278	7601083	Y	NA	NA	CYB5R2	IMR90	Hi-C	24141950	CYB5R2	95175	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	8679125	8679412	8679143	Y	NA	RPL27A	NA	NA	NA	NA	RPL27A	22546	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	8723535	8723638	8723587	Y	STK33	RPL27A	NA	NA	NA	NA	RPL27A	21577	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	8727919	8728019	8727969	Y	ASCL3	RPL27A	NA	NA	NA	NA	RPL27A	25961	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	8799385	8799491	8799437	Y	ASCL3	NA	NA	NA	NA	NA	RPL27A	97427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	8848675	8849002	8848759	Y	NA	NA	NA	NA	NA	NA	ST5	81496	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	8988846	8989081	8988967	Y	ZNF143,DENND5A,TMEM9B,NRIP3	TMEM9B-AS1,TMEM9B,NRIP3,RP11-467K18.2	NA	NA	NA	NA	TMEM9B	4288	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	9240746	9240917	9240841	Y	NA	DENND5A	NA	NA	NA	NA	DENND5A	44020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	9250767	9251109	9250945	Y	NA	DENND5A	NA	NA	NA	NA	DENND5A	33828	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	9422844	9423055	9422950	Y	NRIP3,IPO7	IPO7,SNORA23	NA	NA	NA	NA	IPO7	18675	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	10246047	10246060	10246054	Y	NA	NA	NA	NA	NA	NA	SBF2	67694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	10618515	10618559	10618547	Y	NA	NA	NA	NA	NA	NA	MRVI1-AS1	57696	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	10633912	10633952	10633935	Y	SBF2,AMPD3,AMPD3,AMPD3,AMPD3,RNF141	NA	NA	NA	NA	NA	MRVI1-AS1	73093	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	10659915	10660098	10660029	Y	NA	NA	LYVE1,MRVI1-AS1	IMR90	Hi-C	24141950	MRVI1	53437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12013824	12014110	12014066	Y	DKK3,DKK3,DKK3	DKK3	NA	NA	NA	NA	DKK3	15206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12146355	12146795	12146568	Y	NA	MICAL2	NA	NA	NA	NA	MICAL2	32812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12352954	12352993	12352974	Y	NA	PARVA	NA	NA	NA	NA	PARVA	43739	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	12455335	12455581	12455453	Y	PARVA	NA	NA	NA	NA	NA	PARVA	58603	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12697923	12698543	12698251	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	3954	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12698857	12698926	12698896	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	4888	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	12701917	12702070	12702017	Y	TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	7948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12821812	12822118	12821851	Y	NA	NA	NA	NA	NA	NA	TEAD1	127843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	12824175	12824668	12824395	Y	TEAD1	NA	NA	NA	NA	NA	TEAD1	130206	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	12884715	12885004	12884787	Y	NA	NA	NA	NA	NA	NA	RASSF10	143692	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	14874249	14874576	14874405	Y	CYP2R1	CYP2R1	NA	NA	NA	NA	CYP2R1	37222	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	14916687	14916856	14916788	Y	CYP2R1	CYP2R1	NA	NA	NA	NA	CYP2R1	4889	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	16625688	16626709	16626131	Y	SOX6,SOX6	C11orf58	SOX6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	C11orf58	5970	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	17374298	17375700	17374969	Y	RPS13,B7H6	KCNJ11	NA	NA	NA	NA	KCNJ11	33178	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	18122825	18123020	18122943	Y	UEVLD,TSG101,HPS5,GTF2H1	SAAL1	NA	NA	NA	NA	SAAL1	2618	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	18426412	18426598	18426470	Y	NA	LDHA,LDHC	NA	NA	NA	NA	LDHC	5256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	18649925	18650050	18650045	Y	NA	UEVLD,SPTY2D1	NA	NA	NA	NA	SPTY2D1	4288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	19736892	19737150	19737126	Y	NAV2	NA	NA	NA	NA	NA	NAV2	366621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	19962898	19963229	19963064	Y	NA	NA	NA	NA	NA	NA	HTATIP2	420002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	22814174	22814335	22814255	Y	SVIP	RP11-17A1.3,SVIP	NA	NA	NA	NA	RP11-17A1.3	34591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	23079827	23079841	23079834	Y	NA	NA	NA	NA	NA	NA	SVIP	229982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	25098156	25098313	25098276	Y	NA	NA	NA	NA	NA	NA	LUZP2	581640	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	27263345	27263487	27263411	Y	NA	NA	LGR4	IMR90	Hi-C	24141950	CCDC34	119928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	27380505	27380624	27380565	Y	NA	CCDC34	NA	NA	NA	NA	CCDC34	2791	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	27419147	27419279	27419213	Y	NA	CCDC34	NA	NA	NA	NA	CCDC34	35732	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	27739901	27740316	27740092	Y	BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF	NA	NA	NA	NA	NA	RP11-587D21.1	138674	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	28063321	28063497	28063482	Y	NA	NA	NA	NA	NA	NA	METTL15	64298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	28128920	28129110	28128941	Y	METTL15	METTL15,KIF18A	NA	NA	NA	NA	KIF18A	1065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	29214488	29214817	29214653	Y	NA	NA	BDNF-AS1,BDNF	IMR90	Hi-C	24141950	KCNA4	821753	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	31450770	31450827	31450799	Y	PAX6,PAX6,IMMP1L,ELP4,DNAJC24	NA	NA	NA	NA	NA	DNAJC24	61383	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	31819497	31819881	31819763	Y	NA	RCN1,PAX6	NA	NA	NA	NA	RCN1	12058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	31835564	31835985	31835634	Y	NA	RCN1,PAX6	NA	NA	NA	NA	PAX6	1524	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	33146392	33146678	33146610	Y	NA	CSTF3	NA	NA	NA	NA	CSTF3	35239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	33209856	33210115	33209986	Y	NA	CSTF3	NA	NA	NA	NA	CSTF3	27939	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	33556123	33556337	33556230	Y	NA	NA	C11orf41	IMR90	Hi-C	24141950	RP1-130L23.1	133361	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	33778086	33778269	33778178	Y	FBXO3	CD59,FBXO3	NA	NA	NA	NA	FBXO3	15820	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	34084271	34084310	34084291	Y	NA	CAPRIN1,NAT10	NA	NA	NA	NA	CAPRIN1	13041	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	34125347	34125667	34125520	Y	NA	NAT10	NA	NA	NA	NA	NAT10	198	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	34931457	34931889	34931828	Y	NA	PDHX,APIP	NA	NA	NA	NA	PDHX	3487	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	35261158	35261193	35261191	Y	CD44	NA	NA	NA	NA	NA	CD44	102741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	35395403	35395808	35395629	Y	SLC1A2	SLC1A2	NA	NA	NA	NA	SLC1A2	43802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	36211739	36211961	36211850	Y	NA	NA	NA	NA	NA	NA	COMMD9	97038	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	36304870	36305003	36304937	Y	LDLRAD3	COMMD9,PRR5L	NA	NA	NA	NA	COMMD9	3996	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	36331203	36331536	36331365	Y	PRR5L	COMMD9,PRR5L	NA	NA	NA	NA	PRR5L	15365	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	37525697	37526074	37525816	Y	NA	NA	NA	NA	NA	NA	C11orf74	911646	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	39361469	39361775	39361622	Y	NA	NA	NA	NA	NA	NA	C11orf74	2747418	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	44032395	44032638	44032519	Y	C11orf96	NA	ALKBH3,LOC100507300	IMR90	Hi-C	24141950	ACCS	52837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	44883806	44884166	44884088	Y	NA	NA	NA	NA	NA	NA	TP53I11	86674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	45122042	45122442	45122242	Y	PRDM11	NA	NA	NA	NA	NA	TP53I11	151202	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	45201958	45202605	45202216	Y	NA	NA	NA	NA	NA	NA	SYT13	103265	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr11	45922261	45922718	45922513	Y	DGKZ,MAPK8IP1	MAPK8IP1,PEX16,GYLTL1B	NA	NA	NA	NA	PEX16	15645	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	46004522	46004898	46004712	Y	NA	NA	NA	NA	NA	NA	GYLTL1B	63350	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	46085573	46085592	46085583	Y	NA	NA	NA	NA	NA	NA	PHF21A	55393	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	46094625	46094954	46094790	Y	NA	PHF21A	NA	NA	NA	NA	PHF21A	46031	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	46135373	46135563	46135504	Y	PHF21A,AMBRA1	PHF21A	NA	NA	NA	NA	PHF21A	5422	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	46264726	46265198	46265009	Y	NA	CREB3L1	DGKZ,PHF21A,CREB3L1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CREB3L1	32014	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr11	46444740	46444848	46444831	Y	NA	MDK	NA	NA	NA	NA	MDK	44434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	47402161	47402584	47402458	Y	MADD,MADD,MADD,FNBP4,CELF1,CELF1,CELF1,CELF1,SPI1	SLC39A13,RP11-750H9.5,PSMC3	NA	NA	NA	NA	SLC39A13	24099	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	47531687	47531996	47531879	Y	SPI1,PTPRJ,FNBP4,CELF1,CELF1,CELF1	NA	RAPSN	IMR90	Hi-C	24141950	NDUFS3	52892	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	47573563	47574025	47573747	Y	NR1H3,SPI1,PTPRJ,CELF1,CELF1,CELF1	NDUFS3,PTPMT1,CELF1,KBTBD4,C1QTNF4	NA	NA	NA	NA	NDUFS3	10863	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	47939528	47939960	47939626	Y	OR4B1,OR4S1,NUP160	RP11-793I11.1	PTPRJ,NUP160	IMR90	Hi-C	24141950	RP11-793I11.1	14369	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	48041550	48042058	48041874	Y	CELF1,CELF1,FNBP4,PTPRJ	PTPRJ	NA	NA	NA	NA	PTPRJ	41437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	48063635	48064268	48063917	Y	NA	NA	NA	NA	NA	NA	PTPRJ	63522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	57083068	57083441	57083322	Y	NA	TNKS1BP1,SSRP1	NA	NA	NA	NA	TNKS1BP1	6985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	57406709	57407290	57406997	Y	OR9I1,OR9Q1,PRG3,YPEL4,UBE2L6	SERPING1,AP000662.4,CLP1,YPEL4,ZDHHC5	NA	NA	NA	NA	AP000662.4	3212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	57542885	57543297	57542929	Y	NA	C11orf31,CTNND1	NA	NA	NA	NA	CTNND1	24170	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	57546018	57546724	57546105	Y	MED19,C11orf31	C11orf31,CTNND1	NA	NA	NA	NA	CTNND1	27303	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	60917835	60918043	60917849	Y	NA	VPS37C	NA	NA	NA	NA	VPS37C	9046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	60930012	60930347	60930224	Y	SLC15A3,SDHAF2,CYBASC3,VPS37C	VPS37C	NA	NA	NA	NA	VPS37C	2923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	61764548	61764590	61764569	Y	NA	FTH1	FADS1,BEST1,FTH1,C11orf9,FEN1,C11orf10,FADS3,RAB3IL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FTH1	31416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	61786548	61786990	61786612	Y	DAGLA,FTH1	NA	FADS1,BEST1,FTH1,FADS3,FADS2,RAB3IL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FTH1	53416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	62413039	62413428	62413234	Y	NA	MTA2,ROM1,EML3,B3GAT3,GANAB,INTS5,METTL12,SNORA57,C11orf83,C11orf48,UBXN1	NA	NA	NA	NA	GANAB	935	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	62441871	62442205	62442039	Y	NXF1	GANAB,INTS5,METTL12,SNORA57,C11orf83,C11orf48,UBXN1,GNG3,BSCL2	NA	NA	NA	NA	UBXN1	2362	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	62587560	62587930	62587905	Y	NA	TMEM179B,TMEM223,NXF1,STX5,RP11-727F15.9,WDR74,SNHG1,SLC3A2	NA	NA	NA	NA	STX5	9630	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	62625165	62625549	62625272	Y	TUT1,METTL12,HNRNPUL2,SLC3A2	STX5,RP11-727F15.9,WDR74,SNHG1,SLC3A2	NA	NA	NA	NA	SLC3A2	3647	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	63496405	63496421	63496415	Y	NAA40	RTN3,C11orf95	NA	NA	NA	NA	C11orf95	37692	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	63685258	63686079	63685609	Y	NA	RCOR2,NAA40	NA	NA	NA	NA	RCOR2	2942	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	63686695	63687182	63686923	Y	NA	RCOR2,NAA40	NA	NA	NA	NA	RCOR2	4379	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	63744435	63744483	63744459	Y	KCNK4	NAA40,COX8A,AP000721.4,OTUB1	NA	NA	NA	NA	AP000721.4	4343	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	63775286	63775368	63775342	Y	KCNK4	COX8A,AP000721.4,OTUB1,RP11-21A7A.2	NA	NA	NA	NA	OTUB1	23961	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	63795964	63796221	63796065	Y	NA	OTUB1,RP11-21A7A.2	NA	NA	NA	NA	RP11-21A7A.2	5221	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	63858567	63858836	63858756	Y	NA	NA	NA	NA	NA	NA	RP11-21A7A.2	57125	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	63949132	63949273	63949224	Y	NA	MACROD1,STIP1,NUDT22,TRPT1,DNAJC4	NA	NA	NA	NA	STIP1	1471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	64140304	64140795	64140552	Y	RCOR2,NAA40,GPR137,KCNK4,NRXN2,NRXN2,CDC42BPG	RPS6KA4	NA	NA	NA	NA	RPS6KA4	15684	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	64147622	64147982	64147957	Y	NA	RPS6KA4	NA	NA	NA	NA	RPS6KA4	23002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	64363562	64364093	64364079	Y	NA	NA	NA	NA	NA	NA	NRXN2	124567	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	65069384	65069573	65069479	Y	NA	POLA2,CDC42EP2,DPF2	NA	NA	NA	NA	CDC42EP2	10716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	65075657	65076292	65075967	Y	EHD1,BATF2,FAU,SLC25A45,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,CDC42EP2	POLA2,CDC42EP2,DPF2,TIGD3	NA	NA	NA	NA	CDC42EP2	3997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	65185589	65187086	65186338	Y	NA	SLC25A45,FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	1159	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	65187297	65188198	65187553	Y	BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	SLC25A45,FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	47	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	65244638	65245303	65245021	Y	BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1,SCYL1	SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MALAT1	17930	CAGE	JHUCS-1	hg19	FANTOM5	3.49950764960684
chr11	65254949	65255610	65255242	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,FRMD8,NEAT1,MIR612	IMR90	Hi-C	24141950	MALAT1	7623	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	65263684	65264604	65263856	Y	SNX32	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	451	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	65264635	65265953	65265057	Y	NA	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	1402	CAGE	JHUCS-1	hg19	FANTOM5	8.16551784908263
chr11	65419981	65420225	65420142	Y	CDC42EP2,TIGD3,SLC25A45,FRMD8,EHBP1L1,KCNK7,MAP3K11,PCNXL3,PACS1,EIF1AD,DKFZp761E198,CTSW,SIPA1,SIPA1,RELA,KAT5	MAP3K11,PCNXL3,MIR4690,SIPA1,RELA	NA	NA	NA	NA	RELA	8340	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	65420425	65420654	65420491	Y	TIGD3,SLC25A45,MAP3K11,SNX32,PACS1,GAL3ST3,CTSW,SIPA1,SIPA1,KAT5	MAP3K11,PCNXL3,MIR4690,SIPA1,RELA	NA	NA	NA	NA	RELA	7911	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr11	65583188	65583268	65583228	Y	NA	SNX32,MUS81,CFL1	NA	NA	NA	NA	SNX32	15844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	66185542	66185902	66185739	Y	NA	SLC29A2,RNU1-84P,RP11-867G23.10,NPAS4,MRPL11,PELI3	NA	NA	NA	NA	NPAS4	573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	66494345	66494720	66494567	Y	NA	C11orf80	C11orf80	MCF7,K562	ChIA-PET	22265404	C11orf80	15202	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	66494780	66495327	66494982	Y	SYT12,SYT12,PC,PC,SPTBN2	C11orf80	C11orf80	MCF7,K562	ChIA-PET	22265404	C11orf80	14595	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	66687548	66687652	66687598	Y	CARNS1	PC	NA	NA	NA	NA	PC	36195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	66697442	66697531	66697487	Y	SPTBN2	PC	NA	NA	NA	NA	PC	26316	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	66829661	66830298	66829741	Y	NA	RHOD	NA	NA	NA	NA	RHOD	7372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	67028976	67029390	67029158	Y	NA	ADRBK1,ANKRD13D,SSH3	NA	NA	NA	NA	ADRBK1	2491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	67139742	67140272	67140082	Y	NA	POLD4,AP003419.11,RAD9A,CARNS1,PPP1CA	NA	NA	NA	NA	AP003419.11	687	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	68121765	68121884	68121804	Y	ALDH3B1,C11orf24	LRP5	NA	NA	NA	NA	LRP5	43688	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	68238826	68238975	68238901	Y	TCIRG1,TCIRG1,CHKA,SUV420H1,IGHMBP2,PPP6R3	PPP6R3	NA	NA	NA	NA	PPP6R3	12640	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	69197125	69197542	69197234	Y	ORAOV1,MYEOV	NA	MYEOV,CCND1	IMR90	Hi-C	24141950	IFITM9P	127851	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	70504156	70504231	70504194	Y	NA	NA	NA	NA	NA	NA	AP000487.5	261562	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	71658678	71659025	71658708	Y	NA	RP11-849H4.2,RNF121,IL18BP	NA	NA	NA	NA	RNF121	20931	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	71704625	71704847	71704670	Y	NA	IL18BP	NA	NA	NA	NA	IL18BP	2740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	71769812	71769929	71769891	Y	NA	LRTOMT,NUMA1,LAMTOR1	NA	NA	NA	NA	LRTOMT	19453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	71780398	71780482	71780403	Y	IL18BP,IL18BP	LRTOMT,NUMA1,LAMTOR1	NA	NA	NA	NA	LRTOMT	8900	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	72003135	72003262	72003223	Y	NA	NA	NA	NA	NA	NA	INPPL1	70390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	72555518	72555570	72555544	Y	ATG16L2	ATG16L2	NA	NA	NA	NA	ATG16L2	32165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	72808468	72808618	72808564	Y	NA	FCHSD2	NA	NA	NA	NA	FCHSD2	42688	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	72868553	72869130	72868609	Y	NA	FCHSD2	STARD10,FCHSD2,ATG16L2,ARAP1,MIR4692,P2RY2,P2RY6,ARHGEF17	IMR90	Hi-C	24141950	FCHSD2	17247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	73088357	73088912	73088439	Y	NA	RELT	NA	NA	NA	NA	RELT	3048	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	73240043	73240049	73240046	Y	NA	NA	NA	NA	NA	NA	FAM168A	67185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	73490470	73490918	73490608	Y	UCP2	RAB6A,MRPL48	MRPL48,CHCHD8,PAAF1,RAB6A	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MRPL48	5443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	73549407	73549618	73549556	Y	PLEKHB1	PAAF1	NA	NA	NA	NA	PAAF1	36126	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	73551141	73551517	73551329	Y	NA	PAAF1	NA	NA	NA	NA	PAAF1	34227	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	74565092	74565468	74565281	Y	NA	NA	NA	NA	NA	NA	XRRA1	92777	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr11	74609449	74609745	74609637	Y	LOC441617,XRRA1	XRRA1,SPCS2	NA	NA	NA	NA	XRRA1	48500	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	74609863	74609988	74609926	Y	NA	XRRA1,SPCS2	NA	NA	NA	NA	XRRA1	48257	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	74857404	74857707	74857556	Y	SLCO2B1	NA	NA	NA	NA	NA	NEU3	160225	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	75248214	75248465	75248264	Y	UVRAG	SERPINH1	GDPD5,RPS3,KLHL35,SERPINH1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERPINH1	22636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	75265416	75265853	75265464	Y	SERPINH1	SERPINH1	RPS3,GDPD5,KLHL35	IMR90	Hi-C	24141950	SERPINH1	5248	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	75312070	75312308	75312189	Y	MAP6	SERPINH1	NA	NA	NA	NA	SERPINH1	40969	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	75919893	75920246	75919996	Y	WNT11	WNT11	NA	NA	NA	NA	WNT11	113	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	75946013	75946323	75946187	Y	NA	WNT11	C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WNT11	26233	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	77445522	77445800	77445629	Y	NA	FTH1P16	NA	NA	NA	NA	FTH1P16	1451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	77938673	77938848	77938785	Y	NA	USP35,KCTD21	NA	NA	NA	NA	KCTD21	40805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	78001305	78001608	78001428	Y	GAB2,GAB2	NA	NA	NA	NA	NA	KCTD21	103437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	78002337	78002637	78002489	Y	NA	NA	NA	NA	NA	NA	KCTD21	104469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	78144030	78144327	78144179	Y	NA	GAB2	NA	NA	NA	NA	GAB2	16636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	78376949	78377109	78377029	Y	NA	NA	NA	NA	NA	NA	NARS2	93030	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	78512207	78512629	78512463	Y	GAB2	NA	NA	NA	NA	NA	NARS2	228288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	78993859	78994112	78994035	Y	ODZ4	NA	NA	NA	NA	NA	NARS2	709940	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	79148505	79148822	79148543	Y	NA	NA	NA	NA	NA	NA	NARS2	864586	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	82418428	82418611	82418439	Y	FAM181B	RP11-742N3.1,FAM181B	NA	NA	NA	NA	RP11-742N3.1	19857	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	82805889	82806270	82806080	Y	NA	RAB30	NA	NA	NA	NA	RAB30	24924	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	84093911	84093923	84093916	Y	NA	NA	NA	NA	NA	NA	CCDC90B	1098461	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	84179043	84179442	84179368	Y	NA	NA	NA	NA	NA	NA	TMEM126B	1158187	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	85451857	85452132	85451995	Y	NA	NA	NA	NA	NA	NA	CCDC89	56537	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	85463912	85464270	85464111	Y	CREBZF,SYTL2,SYTL2,EED,SYTL2,SYTL2	NA	CCDC89	IMR90	Hi-C	24141950	SYTL2	55914	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	85768953	85769276	85769115	Y	NA	PICALM	NA	NA	NA	NA	PICALM	9648	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	86214866	86215096	86214981	Y	NA	NA	NA	NA	NA	NA	ME3	166582	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	86222200	86222363	86222315	Y	NA	NA	NA	NA	NA	NA	ME3	159315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	86328094	86328121	86328109	Y	NA	NA	NA	NA	NA	NA	ME3	53557	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	86430919	86431170	86431045	Y	PRSS23	ME3	PRSS23,ME3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ME3	49241	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	87043104	87043447	87043253	Y	NA	NA	NA	NA	NA	NA	TMEM135	296218	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	89937153	89937335	89937244	Y	NA	CHORDC1	NA	NA	NA	NA	CHORDC1	17197	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	91252482	91252645	91252564	Y	NA	NA	NA	NA	NA	NA	RP11-121L10.3	1238754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	91980380	91980674	91980445	Y	FAT3	NA	NA	NA	NA	NA	SLC36A4	948456	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	93366406	93366557	93366482	Y	NA	KIAA1731	NA	NA	NA	NA	KIAA1731	26248	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	93446176	93446355	93446266	Y	NA	SCARNA9,C11orf54	NA	NA	NA	NA	SCARNA9	6324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	93863761	93864262	93864073	Y	MED17,FUT4,PANX1	PANX1	NA	NA	NA	NA	PANX1	3667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	94315162	94315340	94315237	Y	NA	FUT4	NA	NA	NA	NA	FUT4	40145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	95557234	95557451	95557366	Y	NA	CEP57,FAM76B	NA	NA	NA	NA	FAM76B	35661	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	95610217	95610530	95610374	Y	NA	MTMR2	NA	NA	NA	NA	MTMR2	45949	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	95890101	95890693	95890420	Y	FAM76B,MAML2,JRKL,CCDC82	NA	NA	NA	NA	NA	MAML2	183651	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	95976157	95976737	95976478	Y	FAM76B,MAML2,JRKL,CCDC82	NA	NA	NA	NA	NA	MAML2	97607	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	95982466	95982894	95982863	Y	NA	NA	NA	NA	NA	NA	MAML2	91450	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	96040167	96040456	96040282	Y	MAML2	MAML2	NA	NA	NA	NA	MAML2	33888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	99210590	99210859	99210725	Y	CNTN5,CNTN5	NA	NA	NA	NA	NA	CNTN5	320907	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	99462687	99463068	99462783	Y	NA	NA	NA	NA	NA	NA	CNTN5	573004	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	100043788	100043797	100043793	Y	NA	NA	NA	NA	NA	NA	ARHGAP42	512587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	100590591	100590889	100590693	Y	NA	ARHGAP42	NA	NA	NA	NA	ARHGAP42	34207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	100596808	100596968	100596888	Y	NA	ARHGAP42	NA	NA	NA	NA	ARHGAP42	40424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	101386837	101386845	101386841	Y	TRPC6	NA	NA	NA	NA	NA	TRPC6	354448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	102283995	102284326	102284226	Y	BIRC3,BIRC2,MMP20,TMEM123	NA	BIRC2	IMR90	Hi-C	24141950	TMEM123	54789	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	102956908	102957200	102957055	Y	NA	DCUN1D5,DYNC2H1	NA	NA	NA	NA	DCUN1D5	3744	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	106239516	106239921	106239716	Y	NA	NA	NA	NA	NA	NA	KBTBD3	293024	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	106629947	106630142	106630045	Y	NA	NA	NA	NA	NA	NA	GUCY1A2	257108	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	107818531	107818875	107818638	Y	NA	RP11-832N8.1,SLC35F2,RAB39A	NA	NA	NA	NA	RAB39A	21302	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	107885190	107885220	107885205	Y	NA	CUL5	NA	NA	NA	NA	CUL5	7731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	107966906	107967320	107967120	Y	NA	ACAT1	ACAT1	IMR90	Hi-C	24141950	ACAT1	22923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	108679072	108679281	108679081	Y	NA	NA	NA	NA	NA	NA	DDX10	145320	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	109965770	109966113	109965869	Y	RDX,FDX1,ZC3H12C	ZC3H12C	NA	NA	NA	NA	ZC3H12C	3683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	111569573	111569885	111569750	Y	PPP2R1B	NA	NA	NA	NA	NA	PPP2R1B	65266	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	111849134	111849433	111849303	Y	SIK2,CRYAB,DIXDC1,DIXDC1	DLAT	NA	NA	NA	NA	DLAT	44105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	111990973	111991528	111991378	Y	IL18	C11orf57,PIH1D2,TIMM8B,SDHD	NA	NA	NA	NA	SDHD	35346	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	111992719	111993046	111992953	Y	NA	C11orf57,PIH1D2,TIMM8B,SDHD	NA	NA	NA	NA	SDHD	37092	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	112752270	112752453	112752335	Y	NCAM1	NA	NA	NA	NA	NA	NCAM1	77544	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	112833069	112833192	112833175	Y	NCAM1	NCAM1	NA	NA	NA	NA	NCAM1	3072	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr11	112941331	112941794	112941502	Y	NA	NA	NA	NA	NA	NA	NCAM1	111334	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	113020811	113021147	113020979	Y	NA	NA	NA	NA	NA	NA	RP11-839D17.3	162012	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	113053106	113053348	113053234	Y	NA	NA	NA	NA	NA	NA	RP11-839D17.3	129811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	113055291	113055738	113055452	Y	NA	NA	NA	NA	NA	NA	RP11-839D17.3	127421	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	113936589	113937256	113936682	Y	ZBTB16,ZBTB16	NA	NA	NA	NA	NA	NNMT	189253	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	113945404	113945849	113945581	Y	ZBTB16,ZBTB16	NA	NA	NA	NA	NA	NNMT	180660	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	114033536	114034161	114033636	Y	ZBTB16,ZBTB16	NA	NA	NA	NA	NA	NNMT	92348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	114288977	114289308	114289144	Y	NA	RBM7,C11orf71,REXO2	NA	NA	NA	NA	REXO2	18800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	115017644	115017889	115017764	Y	NA	NA	NA	NA	NA	NA	CADM1	355786	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	115092334	115092489	115092415	Y	NA	NA	NA	NA	NA	NA	CADM1	281186	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	115360673	115361056	115361024	Y	CADM1	CADM1	NA	NA	NA	NA	CADM1	12619	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	115372753	115373113	115372889	Y	CADM1	CADM1	NA	NA	NA	NA	CADM1	562	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	115373347	115373590	115373469	Y	NA	CADM1	NA	NA	NA	NA	CADM1	85	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	115741521	115741886	115741709	Y	NA	NA	CADM1	IMR90	Hi-C	24141950	LINC00900	112176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	116061103	116061309	116061204	Y	NA	NA	CADM1,FAM55B	IMR90	Hi-C	24141950	LINC00900	431758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	116481606	116481842	116481724	Y	NA	NA	NA	NA	NA	NA	BUD13	159862	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	116722234	116722744	116722542	Y	NA	NA	NA	NA	NA	NA	ZNF259	65468	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	117016262	117016599	117016456	Y	NA	SIK3,PAFAH1B2,SIDT2	NA	NA	NA	NA	PAFAH1B2	3279	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	117745558	117745882	117745720	Y	DSCAML1,SCN4B,SCN2B,FXYD6,FXYD6	FXYD6-FXYD2,FXYD6	NA	NA	NA	NA	FXYD6-FXYD2	176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	118490168	118490609	118490335	Y	PHLDB1	ARCN1,IFT46,PHLDB1	NA	NA	NA	NA	PHLDB1	15013	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	118663387	118663780	118663691	Y	NA	DDX6	NA	NA	NA	NA	DDX6	3529	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	118763139	118763505	118763387	Y	NA	BCL9L	NA	NA	NA	NA	BCL9L	30812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	118800245	118800827	118800413	Y	MLL,DDX6,VPS11,RPS25,CBL,C2CD2L,CXCR5,CXCR5,CCDC84	BCL9L	NA	NA	NA	NA	BCL9L	5928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	119540378	119540644	119540511	Y	NA	NA	NA	NA	NA	NA	PVRL1	57150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	119590581	119590962	119590870	Y	NA	PVRL1	NA	NA	NA	NA	PVRL1	6832	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	120089762	120089841	120089801	Y	NA	OAF,POU2F3	NA	NA	NA	NA	OAF	10287	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	122940079	122940521	122940200	Y	NA	RPL34P23,SNORD14D,SNORD14C,HSPA8	NA	NA	NA	NA	HSPA8	8141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	122956299	122956503	122956402	Y	NA	SNORD14D,SNORD14C,HSPA8	NA	NA	NA	NA	HSPA8	24361	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	123008344	123008427	123008386	Y	CLMP	NA	NA	NA	NA	NA	CLMP	55562	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	123523260	123523441	123523351	Y	NA	SCN3B	NA	NA	NA	NA	SCN3B	511	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	124391253	124391530	124391392	Y	OR10G7,OR8G2,OR8G1,OR8D1,OR8D2,OR8B8,OR8B12,OR8A1	NA	NA	NA	NA	NA	TBRG1	99202	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	124514246	124514548	124514258	Y	OR8G1,OR8D1,OR8D2,OR8B4,OR8B8,OR8B12,OR8A1	TBRG1,SPA17,SIAE	NA	NA	NA	NA	TBRG1	23514	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	124552795	124553089	124552942	Y	OR8B4,C11orf61	SPA17,SIAE	NA	NA	NA	NA	SIAE	10514	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr11	124668888	124669222	124669022	Y	NA	RP11-677M14.3,ESAM	NA	NA	NA	NA	ESAM	38702	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	124938982	124939580	124939176	Y	TBRG1,SLC37A2	TMEM218	NA	NA	NA	NA	TMEM218	40079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	125146411	125146772	125146529	Y	NA	NA	NA	NA	NA	NA	PKNOX2	113828	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	125363864	125364125	125364103	Y	PKNOX2,DDX25,FEZ1	FEZ1	NA	NA	NA	NA	FEZ1	88	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	126084365	126084425	126084397	Y	NA	FAM118B,RPUSD4	NA	NA	NA	NA	RPUSD4	4778	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	126286483	126286630	126286572	Y	NA	NA	NA	NA	NA	NA	ST3GAL4	62948	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	128161831	128162042	128162009	Y	NA	NA	ETS1,FLI1,LOC100507392	IMR90	Hi-C	24141950	ETS1	293411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	128366966	128367159	128367092	Y	ETS1	NA	NA	NA	NA	NA	ETS1	88294	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	129102482	129102753	129102618	Y	NA	NA	NA	NA	NA	NA	FLI1	548052	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr11	129942098	129942391	129942179	Y	PRDM10	TCEB2P2,APLP2	NA	NA	NA	NA	APLP2	4366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	130113792	130113937	130113867	Y	NA	NA	NA	NA	NA	NA	ZBTB44	68644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	130767627	130768066	130767878	Y	NA	SNX19	NA	NA	NA	NA	SNX19	16338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	133825450	133825979	133825755	Y	NA	NA	NA	NA	NA	NA	RP11-713P17.3	74188	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr11	133903772	133904156	133904071	Y	NA	RP11-713P17.3,JAM3	NA	NA	NA	NA	RP11-713P17.3	3605	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr11	133991300	133991384	133991342	Y	NA	NA	NA	NA	NA	NA	JAM3	54480	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	298364	298488	298415	Y	IQSEC3	SLC6A12	NA	NA	NA	NA	SLC6A12	23248	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	860254	860664	860544	Y	RAD52,NINJ2,WNK1	WNK1	NA	NA	NA	NA	WNK1	495	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	1026879	1027238	1027070	Y	NA	NA	NA	NA	NA	NA	RAD52	69981	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	1029926	1030313	1030120	Y	WNK1	NA	NA	NA	NA	NA	RAD52	66906	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	1157508	1157869	1157627	Y	ERC1	NA	NA	NA	NA	NA	ERC1	59833	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	1583254	1583583	1583419	Y	NA	NA	LOC100292680	IMR90	Hi-C	24141950	WNT5B	53474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	1642572	1643085	1642916	Y	NA	WNT5B	ERC1,LOC100292680,FBXL14	IMR90	Hi-C	24141950	WNT5B	5515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	1691461	1691635	1691524	Y	NA	FBXL14	NA	NA	NA	NA	FBXL14	9696	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	1698560	1698670	1698614	Y	FBXL14	FBXL14	NA	NA	NA	NA	FBXL14	2661	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	1744932	1745222	1745077	Y	NA	FBXL14	NA	NA	NA	NA	FBXL14	43601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	1770869	1771337	1771069	Y	LRTM2,ADIPOR2	ADIPOR2	NA	NA	NA	NA	ADIPOR2	24403	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	2144277	2144357	2144308	Y	LRTM2	DCP1B,RP5-1096D14.6	CACNA1C,MIR3649,CACNA2D4,ADIPOR2,DCP1B,LOC100652846,WNT5B	IMR90	Hi-C	24141950	RP5-1096D14.6	32445	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	2175107	2175395	2175116	Y	NA	NA	NA	NA	NA	NA	RP5-1096D14.6	63275	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	2364427	2364812	2364581	Y	LRTM2	NA	NA	NA	NA	NA	RP5-1096D14.6	252595	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	2454250	2454342	2454280	Y	NA	NA	NA	NA	NA	NA	RP5-1096D14.6	342418	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	2749982	2750016	2749999	Y	NA	CACNA1C-AS1	NA	NA	NA	NA	CACNA1C-AS1	48350	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	3216295	3216423	3216359	Y	NA	TSPAN9	NA	NA	NA	NA	TSPAN9	31774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	3334572	3334968	3334768	Y	NA	RP11-543P15.1	NA	NA	NA	NA	RP11-543P15.1	15476	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	3340124	3340182	3340154	Y	NRIP2	RP11-543P15.1	NA	NA	NA	NA	RP11-543P15.1	21028	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	3948349	3948613	3948479	Y	NA	PARP11	NA	NA	NA	NA	PARP11	31995	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	4380607	4381576	4381205	Y	PARP11,CCND2	C12orf5	NA	NA	NA	NA	C12orf5	46795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	4758958	4759134	4759102	Y	NA	NA	NA	NA	NA	NA	GALNT8	68373	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	5589537	5589706	5589616	Y	NA	NA	NA	NA	NA	NA	CD9	717175	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	6445143	6445640	6445507	Y	VAMP1,TAPBPL,CHD4,CD4,CD4,TNFRSF1A	PLEKHG6,TNFRSF1A	NA	NA	NA	NA	TNFRSF1A	3640	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	6616640	6616858	6616680	Y	NA	VAMP1,NCAPD2,MRPL51,SCARNA10,GAPDH	NA	NA	NA	NA	SCARNA10	530	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	6717352	6717716	6717682	Y	SCNN1A,SCNN1A,PTPN6,LRRC23,ATN1,CHD4,ACRBP	NOP2,CHD4,ACRBP	NA	NA	NA	NA	CHD4	2710	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	6721904	6722326	6722186	Y	GPR162,ENO2,C12orf53	NOP2,CHD4,ACRBP,ING4	NA	NA	NA	NA	CHD4	7262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	6873427	6873901	6873603	Y	C12orf53,ENO2,CLSTN3,ATN1,PTMS,GPR162	COPS7A,PTMS,MLF2	LEPREL2,CDCA3,TPI1,CD4,GPR162,SPSB2,GNB3,USP5	IMR90	Hi-C	24141950	MLF2	740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	6962211	6962407	6962304	Y	GAPDH,COPS7A,COPS7A,COPS7A,COPS7A,LEPREL2,USP5,USP5,TPI1,TPI1	GPR162,LEPREL2,CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2	NA	NA	NA	NA	USP5	2919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	7000184	7000641	7000294	Y	PEX5,VAMP1,ACRBP,CD4,CD4,PTPN6	CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2,ENO2,ATN1,C12orf57	NA	NA	NA	NA	SPSB2	3662	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	7100414	7100432	7100423	Y	NA	RNU7-1,EMG1,SCARNA12,PHB2,C1S,LPCAT3	NA	NA	NA	NA	C1S	6063	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	8179132	8179551	8179335	Y	NA	FOXJ2	PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXJ2	3748	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	8840377	8840836	8840579	Y	RIMKLB	RIMKLB	RIMKLB	MCF7	ChIA-PET	22265404	RIMKLB	8181	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	9106762	9106960	9106872	Y	KLRG1	PHC1,M6PR	M6PR	MCF7	ChIA-PET	22265404	M6PR	6211	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	9308932	9309318	9309073	Y	KLRB1,M6PR,KLRG1,PZP	NA	NA	NA	NA	NA	PTMAP4	81609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	9947226	9947346	9947290	Y	OLR1,CLEC7A,CLEC2B,CD69	NA	CD69,CLEC7A	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-705C15.4	148621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	10337097	10337455	10337232	Y	NA	GABARAPL1	NA	NA	NA	NA	GABARAPL1	25602	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	11893113	11893308	11893155	Y	BCL2L14,ETV6	NA	NA	NA	NA	NA	ETV6	92325	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	11933482	11933754	11933622	Y	NA	NA	NA	NA	NA	NA	ETV6	132694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	11987992	11988316	11988087	Y	ETV6,BCL2L14	NA	NA	NA	NA	NA	ETV6	187204	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	12545388	12545784	12545562	Y	DUSP16,CDKN1B,APOLD1,LOH12CR1	MANSC1,LOH12CR2,LOH12CR1	NA	NA	NA	NA	LOH12CR1	37375	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	12646905	12646967	12646936	Y	LOH12CR1,DUSP16,CDKN1B	NA	LOH12CR1	IMR90	Hi-C	24141950	DUSP16	66350	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	12654210	12654272	12654270	Y	NA	NA	NA	NA	NA	NA	DUSP16	59045	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	12883612	12883681	12883638	Y	APOLD1	GPR19,CDKN1B	NA	NA	NA	NA	CDKN1B	17620	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	13251023	13251431	13251083	Y	EMP1	NA	NA	NA	NA	NA	KIAA1467	55805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	13253893	13254547	13254171	Y	CDKN1B,EMP1	NA	NA	NA	NA	NA	KIAA1467	58675	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	13431254	13431391	13431326	Y	NA	NA	C12orf36	IMR90	Hi-C	24141950	KIAA1467	236036	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	15105208	15105676	15105381	Y	WBP11,ARHGDIB	NA	NA	NA	NA	NA	MGP	68348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	15110831	15110963	15110879	Y	NA	NA	ERP27	IMR90	Hi-C	24141950	MGP	73971	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	16553699	16554214	16553898	Y	NA	NA	NA	NA	NA	NA	MGST1	55623	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr12	16554253	16554721	16554664	Y	NA	NA	NA	NA	NA	NA	MGST1	56177	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	19284166	19284563	19284310	Y	NA	PLEKHA5	NA	NA	NA	NA	PLEKHA5	3518	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	19291558	19291779	19291581	Y	AEBP2,PLEKHA5	PLEKHA5	NA	NA	NA	NA	PLEKHA5	10910	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	23770675	23770997	23770816	Y	SOX5	NA	NA	NA	NA	NA	SOX5	330969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	23804787	23805114	23804951	Y	NA	NA	NA	NA	NA	NA	SOX5	296852	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	24991472	24991796	24991668	Y	BCAT1	NA	NA	NA	NA	NA	BCAT1	108597	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	25075175	25075409	25075293	Y	KRAS,BCAT1,BCAT1	BCAT1,RP11-662I13.1	NA	NA	NA	NA	BCAT1	24984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	25086735	25086929	25086817	Y	NA	BCAT1,RP11-662I13.1	NA	NA	NA	NA	BCAT1	13464	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	25538390	25538869	25538521	Y	NA	RNU4-67P	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNU4-67P	16493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	25539082	25539407	25539207	Y	NA	RNU4-67P	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNU4-67P	15955	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr12	26267263	26267811	26267415	Y	NA	SSPN,BHLHE41	NA	NA	NA	NA	SSPN	5113	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	26538001	26538320	26538173	Y	NA	NA	NA	NA	NA	NA	BHLHE41	261941	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	27532512	27532752	27532665	Y	C12orf71	ARNTL2	NA	NA	NA	NA	ARNTL2	48725	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	27565982	27566076	27566029	Y	ARNTL2	NA	NA	NA	NA	NA	ARNTL2	82195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	27593588	27593602	27593594	Y	C12orf71	NA	NA	NA	NA	NA	PPFIBP1	80762	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	27746027	27746077	27746069	Y	NA	NA	NA	NA	NA	NA	PPFIBP1	71663	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	28814319	28814559	28814439	Y	NA	NA	NA	NA	NA	NA	RNU4-54P	343923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	29395961	29396397	29396130	Y	NA	NA	NA	NA	NA	NA	FAR2	95925	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	31080908	31080945	31080927	Y	TSPAN11	TSPAN11	NA	NA	NA	NA	TSPAN11	3546	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	32263319	32263494	32263407	Y	NA	BICD1	NA	NA	NA	NA	BICD1	5550	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	32380941	32381343	32381040	Y	NA	NA	NA	NA	NA	NA	BICD1	123172	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	32465088	32465196	32465142	Y	FGD4,BICD1	NA	NA	NA	NA	NA	BICD1	207319	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	39104065	39104215	39104143	Y	CPNE8	NA	NA	NA	NA	NA	CPNE8	195017	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	39808802	39808894	39808882	Y	NA	KIF21A	NA	NA	NA	NA	KIF21A	26298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	42598855	42599145	42599001	Y	YAF2,YAF2,YAF2	YAF2,PPHLN1	NA	NA	NA	NA	YAF2	31006	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	44910336	44910664	44910572	Y	NA	NA	NA	NA	NA	NA	NELL2	402967	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	44944990	44945321	44945156	Y	NELL2,NELL2,NELL2,DBX2	NA	NA	NA	NA	NA	NELL2	368310	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	44976377	44976736	44976725	Y	NELL2,NELL2,NELL2	NA	NA	NA	NA	NA	NELL2	336895	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	44983046	44983051	44983049	Y	NA	NA	NA	NA	NA	NA	NELL2	330580	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	45236452	45236616	45236517	Y	DBX2,NELL2,NELL2,NELL2	NA	NA	NA	NA	NA	NELL2	77015	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	45264449	45264779	45264614	Y	NELL2,NELL2,NELL2	NELL2	NA	NA	NA	NA	NELL2	48852	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	45820263	45820702	45820515	Y	NA	NA	NA	NA	NA	NA	PLEKHA8P1	212439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	46571353	46571525	46571439	Y	NA	NA	NA	NA	NA	NA	SLC38A1	90275	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	46609835	46610258	46610179	Y	ARID2,SCAF11,SLC38A1	NA	NA	NA	NA	NA	SLC38A1	51542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	46786554	46786766	46786571	Y	NA	SLC38A2,RP11-96H19.1	NA	NA	NA	NA	RP11-96H19.1	11092	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	47474423	47475249	47474825	Y	NA	AMIGO2	NA	NA	NA	NA	AMIGO2	2689	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	47596373	47596459	47596419	Y	NA	NA	NA	NA	NA	NA	AMIGO2	124639	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	47749691	47750629	47750307	Y	NA	NA	FAM113B,AMIGO2	IMR90	Hi-C	24141950	AMIGO2	277957	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	47798351	47798531	47798441	Y	RPAP3	NA	NA	NA	NA	NA	RPAP3	299313	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	48579978	48580344	48580161	Y	OR8S1,OR10AD1	ASB8,C12orf68	NA	NA	NA	NA	C12orf68	4612	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	49594805	49595186	49594996	Y	NA	TUBA1C,TUBA1A	TUBA1A,TUBA1C,LMBR1L,DHH,TUBA1B	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	TUBA1A	13698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	49628278	49628526	49628405	Y	LMBR1L,TUBA1A	TUBA1C,TUBA1A	DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TUBA1A	47171	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr12	49641026	49641246	49641136	Y	NA	PRPH	RHEBL1,TUBA1C,TUBA1A,LMBR1L,DHH,MLL2,TUBA1B,SPATS2,MCRS1,FAM186B,PRPH	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PRPH	43789	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	49678404	49678529	49678467	Y	NA	PRPH,TROAP	NA	NA	NA	NA	PRPH	6506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	49739970	49740063	49739997	Y	NA	TROAP,C1QL4,SPATS2	NA	NA	NA	NA	C1QL4	10999	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	49762011	49762098	49762055	Y	TUBA1A,PRPF40B	TROAP,C1QL4,SPATS2	NA	NA	NA	NA	SPATS2	3644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50067341	50067888	50067543	Y	TUBA1A,NCKAP5L,FMNL3	TMBIM6,FMNL3	NA	NA	NA	NA	TMBIM6	31620	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50092156	50092464	50092310	Y	FMNL3	TMBIM6,FMNL3	NA	NA	NA	NA	TMBIM6	7044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50100082	50100376	50100305	Y	FMNL3	TMBIM6,FMNL3	NA	NA	NA	NA	FMNL3	134	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50221084	50221421	50221231	Y	NCKAP5L	NCKAP5L,BCDIN3D	NA	NA	NA	NA	NCKAP5L	551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50460197	50460562	50460363	Y	NA	RACGAP1,SMARCD1	NA	NA	NA	NA	SMARCD1	16193	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	50507967	50508334	50508141	Y	NA	SMARCD1	NA	NA	NA	NA	SMARCD1	31212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50899744	50900179	50899947	Y	DIP2B	DIP2B	NA	NA	NA	NA	DIP2B	2976	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50900445	50901076	50900765	Y	NA	DIP2B	NA	NA	NA	NA	DIP2B	3677	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50902358	50902765	50902415	Y	NA	DIP2B	NA	NA	NA	NA	DIP2B	5590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50911573	50911988	50911666	Y	SLC11A2,DIP2B	DIP2B	NA	NA	NA	NA	DIP2B	14805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	50932147	50932418	50932300	Y	SLC11A2,SLC11A2,SLC11A2,DIP2B	DIP2B	NA	NA	NA	NA	DIP2B	35379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	51536826	51537135	51537116	Y	CSRNP2	TFCP2	NA	NA	NA	NA	TFCP2	27791	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	52146424	52146626	52146525	Y	NA	NA	NA	NA	NA	NA	SCN8A	164374	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	52184760	52184919	52184839	Y	NA	NA	NA	NA	NA	NA	ACVR1B	158532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	52241099	52241559	52241297	Y	NA	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	101892	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	52241760	52242326	52241842	Y	SLC4A8,FIGNL2	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	101125	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	52257879	52258204	52258030	Y	NA	NA	SCN8A,ACVR1B,SLC4A8	IMR90	Hi-C	24141950	ACVR1B	85247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	52262826	52263308	52263216	Y	NA	NA	SCN8A,ACVR1B,SLC4A8	IMR90	Hi-C	24141950	ACVR1B	80143	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr12	52426547	52427164	52426822	Y	NR4A1,ACVR1B,ACVR1B,GRASP	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	11931	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	52674655	52675081	52674843	Y	C12orf44,KRT80,KRT7	NA	NA	NA	NA	NA	C12orf44	213625	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	53398446	53398634	53398511	Y	NA	EIF4B,TENC1,RP11-983P16.4	NA	NA	NA	NA	EIF4B	504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	53615195	53615822	53615501	Y	CSAD,SP1,PRR13,PFDN5	ZNF740,CSAD,RARG,MFSD5,ESPL1	NA	NA	NA	NA	RARG	8942	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	54072437	54072838	54072741	Y	CSAD,MAP3K12,ATF7,ATF7,ATP5G2,CALCOCO1	RP11-972K6.1,ATP5G2,CALCOCO1	NA	NA	NA	NA	ATP5G2	3245	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr12	54090300	54090537	54090319	Y	NA	ATP5G2,CALCOCO1	NA	NA	NA	NA	ATP5G2	21108	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	54133160	54133497	54133297	Y	ATF7,ATP5G2	CALCOCO1,SNORD81	ATF7,ATP5G2,CALCOCO1,CBX5	IMR90	Hi-C	24141950	CALCOCO1	13631	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	54391907	54392298	54392098	Y	ATP5G2,HOXC8,HOXC6,HOXC4,HOXC12,HOXC10,HOXC9	HOXC11,HOXC10,HOXC-AS3,HOXC6,HOXC9,HOXC-AS2,HOXC-AS1,HOXC8,HOXC5	NA	NA	NA	NA	HOXC-AS1	113	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	54411861	54412590	54411908	Y	COPZ1,ATP5G2,HOXC10,HOXC9,HOXC8,HOXC4,HOXC6,HOXC5,HOXC4	HOXC11,HOXC10,HOXC-AS3,HOXC6,HOXC9,HOXC-AS2,HOXC-AS1,HOXC8,HOXC5,HOXC4	NA	NA	NA	NA	HOXC8	11029	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr12	54563652	54563918	54563802	Y	NA	RP11-834C11.4,SMUG1	NA	NA	NA	NA	SMUG1	16860	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	54610828	54611089	54611007	Y	NA	SMUG1	NA	NA	NA	NA	SMUG1	30050	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr12	54752421	54752649	54752549	Y	NCKAP1L,ITGA5,ZNF385A,GPR84	NA	NA	NA	NA	NA	ITGA5	58595	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	54752671	54753884	54753119	Y	NCKAP1L,ITGA5,ZNF385A,GPR84	NA	NA	NA	NA	NA	ITGA5	57360	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	54810296	54811355	54811225	Y	GPR84,ZNF385A,NCKAP1L,ITGA5	NA	ZNF385A	IMR90	Hi-C	24141950	ITGA5	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	54817026	54817278	54817202	Y	GPR84,ZNF385A,ITGA5,NCKAP1L	ITGA5	ZNF385A	IMR90	Hi-C	24141950	ITGA5	5782	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	55414615	55414652	55414634	Y	OR6C76,OR6C75,OR6C65,OR6C2,OR6C74,OR6C3,OR6C6,OR10A7,OR9K2,NEUROD4	NEUROD4	NA	NA	NA	NA	NEUROD4	2886	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	55807914	55808439	55808095	Y	NA	NA	NA	NA	NA	NA	BLOC1S1,RP11-644F5.10	299381	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	55808460	55808880	55808766	Y	NA	NA	NA	NA	NA	NA	BLOC1S1,RP11-644F5.10	298940	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	56218960	56219310	56218990	Y	OR6C3,OR6C65,OR6C2,OR6C4,OR10P1,IKZF4	SARNP,ORMDL2,TMEM198B,DNAJC14	NA	NA	NA	NA	TMEM198B	2219	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	56275045	56275257	56275151	Y	OR6C65,OR6C76,OR6C2,OR6C4,OR10P1	DGKA,WIBG	NA	NA	NA	NA	DGKA	43846	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	56876109	56876291	56876201	Y	NA	TIMELESS,SPRYD4,GLS2,RP11-153M3.1,RBMS2	NA	NA	NA	NA	GLS2	3907	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	56877461	56877501	56877482	Y	NA	TIMELESS,SPRYD4,GLS2,RP11-153M3.1,RBMS2	NA	NA	NA	NA	GLS2	2697	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	57028610	57029302	57028864	Y	NA	BAZ2A,SNORD59A,ATP5B	NA	NA	NA	NA	BAZ2A	10	CAGE	JHUCS-1	hg19	FANTOM5	3.66615087101669
chr12	57462088	57462242	57462164	Y	R3HDM2,MBD6,ARHGAP9,ARHGAP9,ARHGAP9,BAZ2A,STAT6,STAT6	TMEM194A,NAB2	TAC3,ZBTB39,MYO1A,GPR182	IMR90	Hi-C	24141950	TMEM194A	17604	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	57635972	57636429	57636328	Y	SLC26A10,R3HDM2,DTX3,B4GALNT1,ARHGEF25,NDUFA4L2	NXPH4,SHMT2,NDUFA4L2	NA	NA	NA	NA	NDUFA4L2	3474	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	57672745	57672985	57672868	Y	NA	NDUFA4L2	NA	NA	NA	NA	NDUFA4L2	40247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	57751585	57751906	57751872	Y	R3HDM2	NA	INHBC	IMR90	Hi-C	24141950	R3HDM2	70882	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	57764553	57764898	57764725	Y	NA	NA	INHBC,R3HDM2,ARHGAP9	IMR90	Hi-C	24141950	R3HDM2	57890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	57813803	57814254	57814252	Y	NA	R3HDM2,INHBE,GLI1	NA	NA	NA	NA	R3HDM2	8534	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr12	57986482	57986782	57986634	Y	R3HDM2,AGAP2,KIF5A,DTX3,B4GALNT1,ARHGEF25	DCTN2,KIF5A,PIP4K2C,DTX3,ARHGEF25,B4GALNT1	NA	NA	NA	NA	PIP4K2C	3525	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	58094555	58094631	58094593	Y	NA	OS9,AGAP2-AS1,TSPAN31	NA	NA	NA	NA	OS9	8817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	58238225	58238735	58238639	Y	AGAP2,TSPAN31,CDK4,METTL1,METTL21B,TSFM,XRCC6BP1,CTDSP2	NA	NA	NA	NA	NA	CTDSP2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	58337769	58337952	58337777	Y	NA	RP11-620J15.3,XRCC6BP1	NA	NA	NA	NA	XRCC6BP1	4445	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	58349067	58349080	58349075	Y	XRCC6BP1	RP11-620J15.3,XRCC6BP1	NA	NA	NA	NA	XRCC6BP1	15743	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	59300729	59300915	59300862	Y	LRIG3,LRIG3	LRIG3,RP11-150C16.1	NA	NA	NA	NA	LRIG3	11388	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	59995567	59995830	59995598	Y	NA	SLC16A7	NA	NA	NA	NA	SLC16A7	7719	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	61958959	61959215	61959087	Y	NA	NA	NA	NA	NA	NA	USP15	692904	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	62315906	62316041	62315972	Y	NA	NA	NA	NA	NA	NA	USP15	336078	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	62559325	62559470	62559411	Y	NA	NA	NA	NA	NA	NA	USP15	92649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	62609319	62609899	62609601	Y	C12orf61,USP15	USP15	NA	NA	NA	NA	USP15	42220	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	62644447	62644716	62644645	Y	C12orf61,USP15	USP15,FAM19A2	USP15	MCF7	ChIA-PET	22265404	USP15	7403	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	62712963	62713140	62713056	Y	C12orf61,MON2,USP15	FAM19A2	NA	NA	NA	NA	FAM19A2	42032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	62796049	62796447	62796072	Y	NA	NA	NA	NA	NA	NA	MON2	62150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	62970708	62971108	62970733	Y	NA	RP11-631N16.2,C12orf61,MIRLET7I	NA	NA	NA	NA	RP11-631N16.2	23424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	63094069	63094114	63094085	Y	USP15,C12orf61	NA	NA	NA	NA	NA	MIRLET7I	98603	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	63097406	63097648	63097535	Y	USP15,C12orf61	NA	NA	NA	NA	NA	MIRLET7I	101940	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	63133542	63133622	63133582	Y	NA	NA	NA	NA	NA	NA	MIRLET7I	138076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	63177678	63177947	63177765	Y	C12orf61	NA	NA	NA	NA	NA	PPM1H	148870	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	64482177	64482504	64482346	Y	SRGAP1,TBK1,C12orf66	NA	NA	NA	NA	NA	C12orf66	131572	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	65037414	65037710	65037562	Y	NA	RASSF3	NA	NA	NA	NA	RASSF3	35121	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	65077868	65077886	65077879	Y	RASSF3,LEMD3	NA	NA	NA	NA	NA	GNS	73341	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	65151664	65152043	65151935	Y	NA	GNS	NA	NA	NA	NA	GNS	437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	65262498	65262651	65262575	Y	NA	NA	NA	NA	NA	NA	GNS	111271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	66076049	66076269	66076159	Y	NA	NA	RPSAP52,HMGA2,MSRB3	IMR90	Hi-C	24141950	HMGA2	139642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	66662420	66662780	66662489	Y	TMBIM4,IRAK3,HELB	HELB	NA	NA	NA	NA	HELB	31545	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	67274459	67274765	67274734	Y	GRIP1	NA	NA	NA	NA	NA	RP11-123O10.4	186177	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	67411263	67411633	67411591	Y	NA	RP11-123O10.4	NA	NA	NA	NA	RP11-123O10.4	49309	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	67821213	67821513	67821363	Y	NA	NA	NA	NA	NA	NA	CAND1	160152	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	68705850	68706149	68706026	Y	IL22,SLC35E3,NUP107,MDM2,MDM1	MDM1	NA	NA	NA	NA	MDM1	18012	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	68750184	68750421	68750327	Y	IL22,RAP1B	MDM1	RAP1B,SNORA70G,LOC100507250,NUP107,MDM2,MDM1,SLC35E3	IMR90	Hi-C	24141950	MDM1	26023	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	68876486	68876822	68876733	Y	IFNG	NA	LOC100507250	IMR90	Hi-C	24141950	RAP1B	125797	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	69019747	69019936	69019838	Y	NA	RAP1B,RP11-254B13.3	NA	NA	NA	NA	RP11-254B13.3	14837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	69036661	69037118	69036873	Y	NA	RAP1B,RP11-254B13.3,NUP107	NA	NA	NA	NA	RP11-254B13.3	1888	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr12	69150078	69150205	69150130	Y	NA	SLC35E3,MDM2	NA	NA	NA	NA	SLC35E3	12192	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	69227269	69227544	69227345	Y	SLC35E3	MDM2	NA	NA	NA	NA	MDM2	27313	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	69345630	69345835	69345831	Y	NUP107,SLC35E3,MDM2,CPM,YEATS4,CPSF6,CPM	NA	NA	NA	NA	NA	MDM2	145674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	69446892	69447106	69446965	Y	RAP1B,LYZ,CPM	NA	CPM,MDM2	IMR90	Hi-C	24141950	CPSF6	184211	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	69634325	69634686	69634559	Y	SLC35E3,MDM2,YEATS4,RAB3IP,RAB3IP,FRS2,CCT2,CCT2,CPSF6	CPSF6	NA	NA	NA	NA	CPSF6	3008	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	69686526	69686874	69686654	Y	NA	NA	NA	NA	NA	NA	CPSF6	55209	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	69735250	69735394	69735310	Y	LYZ	YEATS4	NA	NA	NA	NA	YEATS4	16089	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	71085208	71085379	71085280	Y	NA	NA	NA	NA	NA	NA	KCNMB4	327152	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	72165791	72165958	72165868	Y	NA	RAB21	NA	NA	NA	NA	RAB21	19137	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	72946616	72946959	72946788	Y	NA	NA	NA	NA	NA	NA	TRHDE-AS1	279929	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	73141333	73141529	73141426	Y	NA	NA	NA	NA	NA	NA	TRHDE-AS1	474646	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	73639499	73639785	73639508	Y	NA	NA	NA	NA	NA	NA	TRHDE-AS1	972812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	75877380	75877665	75877492	Y	GLIPR1	GLIPR1,KRR1	NA	NA	NA	NA	GLIPR1	4920	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	75878955	75879237	75879096	Y	NA	GLIPR1,KRR1	NA	NA	NA	NA	GLIPR1	6495	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	75885817	75885886	75885852	Y	KRR1	GLIPR1,KRR1	NA	NA	NA	NA	GLIPR1	13357	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	75900907	75901415	75901091	Y	KRR1	GLIPR1,KRR1	NA	NA	NA	NA	KRR1	2001	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	76034915	76034997	76034960	Y	NA	NA	PHLDA1	IMR90	Hi-C	24141950	KRR1	131499	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	76942062	76942423	76942413	Y	NA	OSBPL8	NA	NA	NA	NA	OSBPL8	9166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	76983962	76984148	76983987	Y	OSBPL8	OSBPL8	OSBPL8,ZDHHC17	IMR90	Hi-C	24141950	OSBPL8	32373	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	77456593	77456922	77456786	Y	E2F7	E2F7	NA	NA	NA	NA	E2F7	438	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr12	77771188	77771377	77771281	Y	CSRP2	NA	NA	NA	NA	NA	RP1-34H18.1	54767	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	78134909	78135174	78135084	Y	NA	NA	NA	NA	NA	NA	RP1-34H18.1	418488	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	78238066	78238311	78238190	Y	NA	NA	NA	NA	NA	NA	RP1-34H18.1	521645	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	79279208	79279511	79279476	Y	NA	SYT1	NA	NA	NA	NA	SYT1	23435	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	79362065	79362430	79362066	Y	SYT1	NA	NA	NA	NA	NA	SYT1	106292	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	79363511	79363565	79363558	Y	NA	NA	NA	NA	NA	NA	SYT1	107738	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	79462781	79463098	79462967	Y	NA	NA	NA	NA	NA	NA	SYT1	207008	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	79670829	79671264	79670913	Y	NA	NA	NA	NA	NA	NA	PAWR	411613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	79817704	79817772	79817737	Y	SYT1	NA	NA	NA	NA	NA	PAWR	265105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	79994209	79994302	79994256	Y	NA	NA	NA	NA	NA	NA	PAWR	88575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	80032366	80032529	80032417	Y	NA	NA	NA	NA	NA	NA	PAWR	50348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	80327802	80327850	80327826	Y	NA	RP11-84G21.1,PPP1R12A	NA	NA	NA	NA	PPP1R12A	562	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr12	81699995	81700341	81700187	Y	PPFIA2,PPFIA2,PPFIA2,PPFIA2,PPFIA2	NA	NA	NA	NA	NA	LIN7A	370291	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	81980877	81981126	81980998	Y	PPFIA2,PPFIA2,PPFIA2	NA	NA	NA	NA	NA	PPFIA2	170206	CAGE	JHUCS-1	hg19	FANTOM5	2.66629154255759
chr12	82077629	82077881	82077755	Y	PPFIA2,PPFIA2,PPFIA2	NA	NA	NA	NA	NA	PPFIA2	73451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	82114853	82115202	82114865	Y	NA	PPFIA2	NA	NA	NA	NA	PPFIA2	36130	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	82130352	82130718	82130534	Y	PPFIA2,PPFIA2,PPFIA2	PPFIA2	NA	NA	NA	NA	PPFIA2	20614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	83082881	83083305	83083086	Y	NA	TMTC2	NA	NA	NA	NA	TMTC2	4222	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	83157091	83157416	83157138	Y	NA	NA	NA	NA	NA	NA	TMTC2	78432	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr12	83269676	83269939	83269806	Y	TMTC2	NA	NA	NA	NA	NA	TMTC2	191017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	83461267	83461506	83461387	Y	NA	NA	NA	NA	NA	NA	RPL6P25	81604	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	84902694	84902984	84902888	Y	NA	NA	NA	NA	NA	NA	SLC6A15	402410	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	85674653	85675022	85674864	Y	ALX1	ALX1	NA	NA	NA	NA	ALX1	2768	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	88968059	88968366	88968242	Y	NA	KITLG	NA	NA	NA	NA	KITLG	4262	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	89747699	89748479	89748073	Y	NA	DUSP6	NA	NA	NA	NA	DUSP6	2651	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	89845741	89845891	89845816	Y	NA	NA	NA	NA	NA	NA	POC1B	71910	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	89960420	89960675	89960548	Y	NA	POC1B,GALNT4	LOC338758	MCF7	ChIA-PET	22265404	GALNT4	42381	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	90065189	90065567	90065562	Y	NA	ATP2B1	ATP2B1,LOC338758	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ATP2B1	35510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	90065963	90066366	90066126	Y	NA	ATP2B1	ATP2B1,LOC338758	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ATP2B1	34711	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	91583363	91583659	91583511	Y	NA	DCN	EPYC,DCN	IMR90	Hi-C	24141950	DCN	8463	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	92427755	92427874	92427825	Y	CLLU1,BTG1	NA	NA	NA	NA	NA	RP11-796E2.4	109475	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	92509431	92509711	92509674	Y	NA	RP11-796E2.4,BTG1	NA	NA	NA	NA	RP11-796E2.4	27638	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	93890331	93890756	93890540	Y	NA	MRPL42	NA	NA	NA	NA	MRPL42	31067	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr12	94153192	94153314	94153253	Y	NA	NA	NA	NA	NA	NA	CRADD	84041	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	94495978	94496358	94496187	Y	NA	PLXNC1	CRADD,LOC144481,SOCS2,MRPL42,UBE2N	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PLXNC1	44141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	95680646	95681018	95680718	Y	NA	NA	NA	NA	NA	NA	VEZT	71124	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	96027575	96027687	96027629	Y	NA	NA	NTN4	IMR90	Hi-C	24141950	USP44	84309	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	97355714	97355975	97355919	Y	NA	NA	NA	NA	NA	NA	NEDD1	56713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	97870154	97870565	97870199	Y	NA	MIR1251	NA	NA	NA	NA	MIR1251	13113	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	97881336	97881621	97881374	Y	NA	MIR1251	NA	NA	NA	NA	MIR1251	2057	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	97894107	97894881	97894494	Y	NA	MIR1251	NA	NA	NA	NA	MIR1251	10429	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	97917973	97918105	97918040	Y	NA	MIR1251,MIR135A2	NA	NA	NA	NA	MIR1251	34295	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr12	97956340	97956868	97956530	Y	NA	MIR135A2	NA	NA	NA	NA	MIR135A2	750	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	97962496	97962841	97962674	Y	NA	MIR135A2	NA	NA	NA	NA	MIR135A2	6906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	99021055	99021169	99021113	Y	NA	SLC25A3,SNORA53,IKBIP,APAF1	NA	NA	NA	NA	IKBIP	15722	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	99103586	99103986	99103782	Y	NA	NA	NA	NA	NA	NA	APAF1	66667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	99528528	99528859	99528694	Y	ANKS1B,ANKS1B,ANKS1B,ANKS1B	NA	NA	NA	NA	NA	APAF1	491609	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	99541793	99542207	99542018	Y	NA	NA	NA	NA	NA	NA	APAF1	504874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	99768760	99769016	99768892	Y	NA	NA	NA	NA	NA	NA	ANKS1B	607416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	100970454	100970954	100970686	Y	NA	GAS2L3	NA	NA	NA	NA	RP11-575G13.2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	101099927	101100118	101100023	Y	NA	NA	SLC17A8	IMR90	Hi-C	24141950	RP11-575G13.2	129405	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	102283097	102283236	102283152	Y	NA	DRAM1	NA	NA	NA	NA	DRAM1	13968	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	104330398	104330552	104330475	Y	NA	HSP90B1,C12orf73,TDG	NA	NA	NA	NA	HSP90B1	8513	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	104671230	104671489	104671317	Y	TXNRD1	RPL18AP3,EID3	NA	NA	NA	NA	RPL18AP3	14174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	105477471	105477556	105477526	Y	ALDH1L2	ALDH1L2,KIAA1033	NA	NA	NA	NA	ALDH1L2	1116	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	105900072	105900358	105900257	Y	NA	NA	NUAK1	IMR90	Hi-C	24141950	APPL2	272056	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	107363542	107363991	107363752	Y	NA	C12orf23,MTERFD3	NA	NA	NA	NA	MTERFD3	14953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	107377522	107377900	107377585	Y	RFX4,RIC8B,MTERFD3	C12orf23,MTERFD3	NA	NA	NA	NA	MTERFD3	1044	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	108103294	108103307	108103300	Y	PRDM4	PWP1,PRDM4	NA	NA	NA	NA	PWP1	25785	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	108297283	108297694	108297638	Y	NA	NA	NA	NA	NA	NA	PRDM4	144234	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	108724260	108724551	108724394	Y	NA	NA	NA	NA	NA	NA	FICD	182411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	108994702	108995211	108994982	Y	NA	SART3,ISCU	NA	NA	NA	NA	ISCU	40344	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109036250	109036518	109036431	Y	NA	NA	NA	NA	NA	NA	ISCU	81892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109058635	109058851	109058743	Y	NA	NA	NA	NA	NA	NA	CORO1C	64521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109093619	109093939	109093779	Y	NA	CORO1C	NA	NA	NA	NA	CORO1C	29433	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109117977	109118365	109118310	Y	SELPLG,SSH1,CORO1C	CORO1C	NA	NA	NA	NA	CORO1C	5007	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109209396	109209677	109209591	Y	NA	SSH1	NA	NA	NA	NA	SSH1	39689	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109232143	109232504	109232328	Y	FICD,SELPLG,CORO1C,SSH1	SSH1	NA	NA	NA	NA	SSH1	16862	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109248007	109248657	109248411	Y	SELPLG,CORO1C,SSH1	SSH1	NA	NA	NA	NA	SSH1	709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	109249958	109250678	109250397	Y	NA	SSH1	NA	NA	NA	NA	SSH1	592	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	109900309	109900503	109900403	Y	KCTD10	UBE3B,KCTD10	NA	NA	NA	NA	UBE3B	12704	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	110315812	110316035	110315886	Y	C12orf34,TCHP,TCHP	TRPV4,GLTP,TCHP	NA	NA	NA	NA	GLTP	258	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	110750652	110751139	110750939	Y	NA	ATP2A2	NA	NA	NA	NA	ATP2A2	34091	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	111016111	111016444	111016311	Y	PPTC7,ARPC3	PPTC7,TCTN1	NA	NA	NA	NA	PPTC7	2681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	111473237	111473713	111473408	Y	CUX2	NA	NA	NA	NA	NA	PPP1CC	294493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	111494792	111495250	111495130	Y	PPTC7,SH2B3,CUX2	NA	NA	NA	NA	NA	FAM109A	309675	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	111842634	111842962	111842759	Y	NA	FAM109A,SH2B3	NA	NA	NA	NA	SH2B3	882	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	112341708	112342051	112341878	Y	ATXN2,BRAP,MAPKAPK5,NAA25,C12orf51,TMEM116	NA	NA	NA	NA	NA	MAPKAPK5	63926	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	112529504	112529724	112529616	Y	NA	NAA25,TRAFD1	NA	NA	NA	NA	NAA25	15102	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	112633664	112633952	112633817	Y	NA	NA	TRAFD1	IMR90	Hi-C	24141950	TRAFD1	72359	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	112741741	112742068	112741904	Y	NA	NA	NA	NA	NA	NA	PTPN11	112087	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	113630509	113630869	113630677	Y	NA	DDX54,TPCN1,IQCD	NA	NA	NA	NA	DDX54	9225	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	113798034	113798144	113798106	Y	SLC24A6,PLBD2,SDSL,SDS	PLBD2	SDS,SDSL	IMR90	Hi-C	24141950	PLBD2	3663	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	114029271	114029455	114029396	Y	LHX5	NA	RBM19	IMR90	Hi-C	24141950	SDS	167165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	115123635	115123908	115123865	Y	TBX3	NA	NA	NA	NA	NA	RBM19	721459	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	115354392	115354675	115354479	Y	NA	NA	TBX3	IMR90	Hi-C	24141950	RBM19	952216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116530359	116530538	116530483	Y	NA	NA	NA	NA	NA	NA	MED13L	182605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116570796	116571229	116571121	Y	MED13L,MAP1LC3B2	NA	NA	NA	NA	NA	MED13L	141914	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116602727	116603094	116602910	Y	MED13L	NA	NA	NA	NA	NA	MED13L	110049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116661909	116662288	116662266	Y	NA	NA	NA	NA	NA	NA	MED13L	50855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116701070	116701373	116701314	Y	MAP1LC3B2,MED13L	MED13L	NA	NA	NA	NA	MED13L	11770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116796896	116797249	116796984	Y	NA	NA	MED13L,MIR4472-2,LINC00173,MAP1LC3B2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MED13L	83753	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116946088	116946451	116946189	Y	MED13L,MAP1LC3B2	LINC00173	LINC00173,MED13L,MAP1LC3B2	IMR90	Hi-C	24141950	LINC00173	22776	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	116989656	116990244	116989971	Y	NA	LINC00173	NA	NA	NA	NA	LINC00173	20429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	117039313	117039620	117039517	Y	MED13L,MAP1LC3B2	NA	MED13L,MIR4472-2,LINC00173,MAP1LC3B2	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	LINC00173	70086	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	117049040	117049175	117049108	Y	MED13L,MAP1LC3B2	NA	MED13L,MIR4472-2,LINC00173,MAP1LC3B2	IMR90	Hi-C	24141950	LINC00173	79813	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	117277511	117277610	117277564	Y	NOS1,RNFT2,HRK	HRK	NA	NA	NA	NA	HRK	39636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	118626739	118626832	118626769	Y	KSR2	NA	PEBP1	IMR90	Hi-C	24141950	VSIG10	54908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	118632324	118632442	118632383	Y	NA	RPS2P5	PEBP1	IMR90	Hi-C	24141950	RPS2P5	49435	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	119618645	119618705	119618687	Y	HSPB8	HSPB8	NA	NA	NA	NA	HSPB8	4198	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	120239357	120239612	120239538	Y	NA	NA	NA	NA	NA	NA	CIT	73483	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	120426531	120426889	120426594	Y	NA	NA	NA	NA	NA	NA	CIT	113436	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	120668258	120668871	120668569	Y	RAB35,DYNLL1,GCN1L1,RPLP0,PXN	GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1	NA	NA	NA	NA	PXN-AS1	31164	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	120926786	120926862	120926830	Y	SIRT4	TRIAP1,GATC,SRSF9,DYNLL1,RNF10,COQ5	NA	NA	NA	NA	DYNLL1	21133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	120956227	120956384	120956265	Y	COQ5	RNF10,COQ5	NA	NA	NA	NA	RNF10	12899	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121021309	121021477	121021390	Y	NA	POP5,RPL11P5	NA	NA	NA	NA	POP5	4108	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121282265	121283301	121283112	Y	NA	NA	NA	NA	NA	NA	SPPL3	56873	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121310801	121311113	121311060	Y	NA	SPPL3,RPL12P33	NA	NA	NA	NA	SPPL3	29061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121322345	121322363	121322358	Y	NA	SPPL3,RPL12P33	NA	NA	NA	NA	SPPL3	17811	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr12	121839154	121839422	121839290	Y	C12orf43,RHOF,KDM2B,RNF34	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	3310	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	121864200	121864449	121864234	Y	NA	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	28356	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121866033	121866226	121866130	Y	NA	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	30189	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121904317	121904475	121904368	Y	SETD1B,RHOF,ORAI1,KDM2B	NA	RNF34	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RNF34	68473	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121968421	121968751	121968672	Y	SETD1B,RHOF,ORAI1,KDM2B	RP13-941N14.1,KDM2B	NA	NA	NA	NA	RP13-941N14.1	47946	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	121969670	121970034	121969852	Y	SETD1B,ORAI1	RP13-941N14.1,KDM2B	NA	NA	NA	NA	RP13-941N14.1	46663	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	121998241	121998591	121998487	Y	P2RX7,P2RX4,CAMKK2,RHOF	RP13-941N14.1,KDM2B	NA	NA	NA	NA	RP13-941N14.1	18106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	122020162	122020238	122020212	Y	RNF34,SETD1B,ORAI1,KDM2B,KDM2B	RP13-941N14.1,KDM2B,ORAI1	NA	NA	NA	NA	KDM2B	3242	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr12	122028609	122028883	122028798	Y	RNF34,KDM2B,SETD1B,RHOF,ORAI1	RP13-941N14.1,KDM2B,ORAI1	KDM2B	K562	ChIA-PET	22265404	KDM2B	11689	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	122086492	122086728	122086610	Y	KDM2B,SETD1B,ORAI1	ORAI1,MORN3	NA	NA	NA	NA	MORN3	21809	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	122462187	122462386	122462358	Y	BCL7A	BCL7A,AC156455.1	NA	NA	NA	NA	BCL7A	6859	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	122897459	122897572	122897541	Y	NA	CLIP1	NA	NA	NA	NA	CLIP1	7607	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	122908043	122908483	122908329	Y	ZCCHC8,DENR,CLIP1	CLIP1	NA	NA	NA	NA	CLIP1	2864	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr12	124811433	124811602	124811518	Y	NA	NA	NA	NA	NA	NA	NCOR2	238533	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	124907545	124908050	124907792	Y	NA	NA	NA	NA	NA	NA	NCOR2	142085	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	124991138	124991309	124991172	Y	UBC,NCOR2	NA	NA	NA	NA	NA	NCOR2	58826	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125033431	125034089	125033755	Y	UBC	NCOR2	NA	NA	NA	NA	NCOR2	16046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125050856	125051375	125051213	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	721	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr12	125288540	125288810	125288726	Y	NA	NA	NA	NA	NA	NA	SCARB1	76404	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125346086	125346324	125346188	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	18890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125347630	125347766	125347649	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	17448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125423202	125423335	125423285	Y	NA	UBC,DHX37	UBC	IMR90	Hi-C	24141950	UBC	23288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125424077	125424667	125424516	Y	NA	UBC,DHX37	UBC	IMR90	Hi-C	24141950	UBC	24163	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr12	125479851	125480155	125479863	Y	NA	DHX37,BRI3BP	NA	NA	NA	NA	BRI3BP	3605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125534116	125534467	125534247	Y	NA	AACS	AACS	K562,MCF7	ChIA-PET	22265404	AACS	13458	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	125565000	125565015	125565008	Y	AACS	AACS	NA	NA	NA	NA	AACS	17075	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	126575961	126576284	126576123	Y	NA	NA	NA	NA	NA	NA	TMEM132B	906579	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	127632109	127632118	127632116	Y	NA	AC079949.1	NA	NA	NA	NA	AC079949.1	16554	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	129301742	129302776	129302427	Y	SLC15A4,GLT1D1	SLC15A4,GLT1D1	NA	NA	NA	NA	SLC15A4	3752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	129306542	129307039	129306920	Y	SLC15A4,GLT1D1	SLC15A4,GLT1D1	NA	NA	NA	NA	SLC15A4	14	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	130923831	130924224	130924207	Y	RIMBP2	NA	NA	NA	NA	NA	RIMBP2,RP11-662M24.2	274602	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr12	130976350	130976555	130976530	Y	NA	NA	NA	NA	NA	NA	RIMBP2,RP11-662M24.2	222271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	131111744	131112133	131112105	Y	RIMBP2	NA	RIMBP2	IMR90	Hi-C	24141950	RIMBP2,RP11-662M24.2	86693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	131116739	131116826	131116804	Y	NA	NA	NA	NA	NA	NA	RIMBP2,RP11-662M24.2	82000	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	131714239	131714475	131714357	Y	NA	NA	NA	NA	NA	NA	RAN	359815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr12	133021534	133022956	133022670	Y	POLE,DDX51,FBRSL1	FBRSL1	LOC100507055,FBRSL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FBRSL1	41181	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	133528012	133528357	133528019	Y	NA	CHFR,ZNF605	NA	NA	NA	NA	CHFR	2533	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr12	133701272	133701384	133701332	Y	ZNF605,ZNF605,ZNF26,ZNF84,ZNF84,ZNF268,ZNF268,ZNF10	ZNF140,ZNF891,ZNF10,ZNF268	NA	NA	NA	NA	ZNF891	3675	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	20748931	20749662	20749408	Y	PSPC1,ZMYM5	NA	NA	NA	NA	NA	ZMYM2	218121	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	21400254	21400509	21400379	Y	NA	NA	NA	NA	NA	NA	N6AMT2	54157	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	21607254	21607660	21607524	Y	NA	RNU4-9P,LATS2	NA	NA	NA	NA	RNU4-9P	3146	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	22000564	22000681	22000573	Y	NA	ZDHHC20	NA	NA	NA	NA	ZDHHC20	30828	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	22111458	22111566	22111512	Y	NA	NA	NA	NA	NA	NA	ZDHHC20	79949	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	22135396	22135683	22135678	Y	EFHA1	NA	NA	NA	NA	NA	RPS7P10	65471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	22249294	22249707	22249608	Y	FGF9	RPS7P10,FGF9	NA	NA	NA	NA	FGF9	5772	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	23735133	23735494	23735391	Y	NA	HMGA1P6,SGCG	NA	NA	NA	NA	SGCG	17597	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	23815337	23815738	23815537	Y	NA	NA	NA	NA	NA	NA	SGCG	62246	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr13	24131522	24131823	24131734	Y	SACS	TNFRSF19	MIPEP,TNFRSF19	IMR90	Hi-C	24141950	TNFRSF19	10686	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	24191778	24192157	24192102	Y	NA	TNFRSF19	NA	NA	NA	NA	TNFRSF19	49269	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	24289001	24289462	24289192	Y	PCOTH	NA	NA	NA	NA	NA	TNFRSF19	146492	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr13	24423021	24423155	24423076	Y	NA	MIPEP	NA	NA	NA	NA	MIPEP	38403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	25082319	25082682	25082572	Y	PARP4	PARP4	NA	NA	NA	NA	PARP4	2266	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	25115809	25116061	25115886	Y	RNF17	PARP4	NA	NA	NA	NA	PARP4	30861	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	25621314	25621890	25621623	Y	NA	NA	NA	NA	NA	NA	CENPJ	126296	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	25886402	25886789	25886419	Y	NA	MTMR6,NUPL1	NA	NA	NA	NA	NUPL1	12740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	26064571	26064915	26064659	Y	NA	NA	NA	NA	NA	NA	ATP8A2	120362	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	26760531	26760858	26760712	Y	WASF3	RNF6	WASF3,RNF6	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNF6	33933	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	26948386	26948578	26948482	Y	NA	NA	NA	NA	NA	NA	CDK8	122110	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	27142181	27142413	27142195	Y	NA	WASF3	NA	NA	NA	NA	WASF3	12341	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	27198783	27198789	27198786	Y	NA	NA	NA	NA	NA	NA	WASF3	68943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	27728821	27729155	27728988	Y	USP12	USP12	NA	NA	NA	NA	USP12	14878	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	27748930	27749219	27749120	Y	USP12	USP12	NA	NA	NA	NA	USP12	4897	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	27843033	27843378	27843206	Y	NA	RPL21,SNORD102,RASL11A	NA	NA	NA	NA	RASL11A	569	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	28006253	28006341	28006297	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	GTF3A	9572	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	28167075	28167372	28167253	Y	NA	LNX2,POLR1D	NA	NA	NA	NA	LNX2	25169	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	28534904	28535178	28535096	Y	LNX2,FLT3,PRHOXNB	PDX1	NA	NA	NA	NA	PDX1	42747	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	28882388	28882716	28882654	Y	NA	NA	NA	NA	NA	NA	EEF1A1P3	95738	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	29290769	29291025	29290846	Y	POMP	SLC46A3	NA	NA	NA	NA	SLC46A3	82	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	30867525	30867802	30867626	Y	KATNAL1	KATNAL1	NA	NA	NA	NA	KATNAL1	11819	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	30963439	30963783	30963499	Y	NA	LINC01058	LINC00426,KATNAL1,HMGB1,USPL1	IMR90	Hi-C	24141950	LINC01058	30591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	30980712	30980745	30980729	Y	KATNAL1	LINC01058	KATNAL1,LINC00426,USPL1,UBL3,HMGB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC01058	13629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	31483566	31483936	31483755	Y	NA	NA	NA	NA	NA	NA	HSPH1	250589	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	31783730	31783901	31783816	Y	NA	HSPH1,B3GALTL	NA	NA	NA	NA	B3GALTL	11657	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	32052041	32052268	32052184	Y	NA	NA	RXFP2	IMR90	Hi-C	24141950	B3GALTL	279968	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	32433681	32434084	32433895	Y	NA	EEF1DP3	NA	NA	NA	NA	EEF1DP3	14703	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	32725009	32725223	32725116	Y	NA	NA	NA	NA	NA	NA	FRY	121572	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	33822427	33822802	33822649	Y	NA	NA	NA	NA	NA	NA	STARD13	99965	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	34116442	34117241	34116673	Y	NA	NA	NA	NA	NA	NA	STARD13	193675	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	35753666	35753901	35753767	Y	NA	NA	NA	NA	NA	NA	NBEA	239242	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	36630888	36631287	36631099	Y	DCLK1	NA	NA	NA	NA	NA	CCDC169	238690	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	36918283	36918673	36918579	Y	NA	CCDC169,CCDC169-SOHLH2,SOHLH2,SPG20	NA	NA	NA	NA	SPG20	23644	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	37473939	37474133	37474036	Y	C13orf36,SMAD9	SMAD9,LAMTOR3P1	NA	NA	NA	NA	SMAD9	18769	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	37493371	37493714	37493499	Y	C13orf36,RFXAP,SMAD9	SMAD9,LAMTOR3P1	NA	NA	NA	NA	SMAD9	469	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	40090309	40090341	40090325	Y	NA	NA	NA	NA	NA	NA	LHFP	85324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	41560539	41560879	41560717	Y	NA	NA	NA	NA	NA	NA	SUGT1P3	66629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	41624170	41624528	41624466	Y	C13orf15,NAA16,ELF1,ELF1	WBP4	ELF1,MTRF1,NAA16	IMR90	Hi-C	24141950	WBP4	8882	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	42188044	42188379	42188211	Y	NA	NA	NA	NA	NA	NA	NAA16	304703	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	42370920	42370928	42370925	Y	NA	NA	NA	NA	NA	NA	DGKH	241248	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	42582325	42582440	42582383	Y	NA	DGKH	KIAA0564,MTRF1,C13orf15,OR7E37P,LOC100507240	IMR90	Hi-C	24141950	DGKH	29736	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	42646001	42646399	42646206	Y	NA	DGKH	NA	NA	NA	NA	DGKH	33825	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	42705100	42705257	42705170	Y	NA	NA	NA	NA	NA	NA	DGKH	92924	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	42855017	42855240	42855076	Y	AKAP11	AKAP11	NA	NA	NA	NA	AKAP11	10728	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	43149619	43149668	43149644	Y	NA	NA	NA	NA	NA	NA	AKAP11	305330	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	43767614	43767674	43767644	Y	NA	NA	NA	NA	NA	NA	DNAJC15	172275	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	43865785	43866112	43865949	Y	NA	NA	NA	NA	NA	NA	DNAJC15	270446	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	43912615	43912772	43912726	Y	NA	NA	NA	NA	NA	NA	DNAJC15	317276	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	43938999	43939258	43939099	Y	NA	NA	NA	NA	NA	NA	DNAJC15	343660	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	44028316	44028697	44028507	Y	NA	NA	NA	NA	NA	NA	ENOX1	330347	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	44165760	44165919	44165882	Y	NA	NA	NA	NA	NA	NA	ENOX1	193125	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	44201276	44201468	44201373	Y	NA	NA	NA	NA	NA	NA	ENOX1	157576	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	44214613	44214990	44214818	Y	ENOX1,ENOX1	NA	NA	NA	NA	NA	ENOX1	144054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	44228781	44229127	44228818	Y	NA	NA	NA	NA	NA	NA	ENOX1	129917	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	44359761	44360131	44359976	Y	ENOX1,ENOX1	ENOX1	NA	NA	NA	NA	ENOX1	717	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	44542732	44543742	44543446	Y	SERP2	DGKZP1	SERP2	IMR90	Hi-C	24141950	DGKZP1	2172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	44834615	44834626	44834621	Y	NA	NA	SERP2,LINC00284,TSC22D1,NUFIP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERP2	111175	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	44848357	44848873	44848719	Y	C13orf31,CCDC122,C13orf31	NA	SERP2,NUFIP1,TSC22D1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERP2	96928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	44884974	44885381	44885134	Y	CCDC122,TSC22D1	NA	TSC22D1,LACC1,SERP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERP2	60420	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	45338378	45338728	45338554	Y	NA	NA	TSC22D1,TSC22D1-AS1,NUFIP1,LINC00330	IMR90	Hi-C	24141950	TSC22D1	189095	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	45492137	45492940	45492235	Y	TSC22D1	NA	NA	NA	NA	NA	NUFIP1	68678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	45783444	45783799	45783571	Y	TPT1,COG3	NA	NA	NA	NA	NA	GTF2F2	90794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	45928010	45928281	45928087	Y	NA	TPT1-AS1,TPT1	NA	NA	NA	NA	TPT1	14505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	46244354	46244716	46244645	Y	NA	NA	NA	NA	NA	NA	SIAH3	179155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	46557145	46557532	46557508	Y	NA	NA	NA	NA	NA	NA	ZC3H13	67362	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	46913143	46913601	46913410	Y	LCP1	NA	NA	NA	NA	NA	COX17P1	149396	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	47152736	47153076	47152881	Y	NA	LRCH1	NA	NA	NA	NA	LRCH1	27433	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	47369610	47369907	47369759	Y	NA	ESD	NA	NA	NA	NA	ESD	243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	48526121	48526135	48526130	Y	MED4,SUCLA2	NA	NA	NA	NA	NA	NUDT15	83568	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	48636284	48636323	48636312	Y	NA	NUDT15,SUCLA2,MED4	NA	NA	NA	NA	SUCLA2	26159	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	48735061	48735305	48735173	Y	RCBTB2,RB1,ITM2B	NA	NA	NA	NA	NA	MED4	67794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	48758454	48758724	48758623	Y	NA	ITM2B	NA	NA	NA	NA	ITM2B	46570	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	49465792	49465869	49465855	Y	RCBTB2,FNDC3A	NA	FNDC3A	IMR90	Hi-C	24141950	FNDC3A	82179	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	49563041	49563333	49563220	Y	RCBTB2,CYSLTR2,SETDB2,SETDB2,CDADC1,FNDC3A	FNDC3A	NA	NA	NA	NA	FNDC3A	14993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	49601050	49601794	49601184	Y	NA	NA	NA	NA	NA	NA	FNDC3A	53002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	49615947	49616340	49616144	Y	SETDB2,PHF11,PHF11,CAB39L,FNDC3A	NA	NA	NA	NA	NA	FNDC3A	67899	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	49757640	49757959	49757800	Y	NA	NA	NA	NA	NA	NA	CDADC1	62088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	50094191	50094472	50094332	Y	CAB39L,SETDB2,PHF11,PHF11	PHF11	NA	NA	NA	NA	PHF11	26445	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	50534396	50534668	50534593	Y	NA	SPRYD7,TRIM13,MIR3613	NA	NA	NA	NA	SPRYD7	25770	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	50555707	50555861	50555784	Y	NA	SPRYD7,TRIM13,MIR3613	NA	NA	NA	NA	TRIM13	12163	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	50597476	50597810	50597661	Y	RCBTB1,TRIM13	TRIM13,MIR3613,MIR16-1	NA	NA	NA	NA	MIR16-1	23387	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	50602874	50603059	50603020	Y	NA	TRIM13,MIR3613,MIR16-1	NA	NA	NA	NA	MIR16-1	18138	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	50630657	50630910	50630784	Y	NA	MIR16-1,DLEU1	NA	NA	NA	NA	MIR16-1	9460	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	50661413	50661685	50661628	Y	NA	MIR16-1,DLEU1,DLEU2	NA	NA	NA	NA	DLEU1	7106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	50671086	50671325	50671206	Y	NA	MIR16-1,DLEU1,DLEU2	NA	NA	NA	NA	DLEU1	16779	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	50675373	50675756	50675618	Y	NA	DLEU1,DLEU2	NA	NA	NA	NA	DLEU1	21066	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	50696626	50696754	50696746	Y	NA	DLEU1,DLEU2	NA	NA	NA	NA	DLEU2	1102	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	50702930	50703071	50702984	Y	NA	DLEU1,DLEU2	DLEU7,DLEU1,DLEU2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DLEU2	5074	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	50704264	50704590	50704561	Y	NA	DLEU1,DLEU2	DLEU7,DLEU1,DLEU2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DLEU2	6408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	51168515	51168827	51168588	Y	RNASEH2B	NA	DLEU2,DLEU1,DLEU7	IMR90	Hi-C	24141950	RPL34P26	234616	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	51200392	51200766	51200454	Y	NA	NA	NA	NA	NA	NA	RPL34P26	266493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	51288107	51288409	51288197	Y	NA	NA	NA	NA	NA	NA	RNASEH2B	193405	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	52009334	52009441	52009388	Y	NA	RPS4XP16,INTS6	NA	NA	NA	NA	RPS4XP16	16859	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	52303239	52303556	52303323	Y	WDFY2	NA	NA	NA	NA	NA	DHRS12	72737	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	53190916	53191040	53191000	Y	NA	HNRNPA1L2,MRPS31P4,SUGT1	NA	NA	NA	NA	MRPS31P4	1223	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	60580804	60581154	60581101	Y	NA	NA	NA	NA	NA	NA	DIAPH3	154967	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	60723538	60723946	60723707	Y	NA	DIAPH3	NA	NA	NA	NA	DIAPH3	12175	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr13	60736273	60736548	60736444	Y	NA	DIAPH3	NA	NA	NA	NA	DIAPH3	152	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	62173895	62174180	62174038	Y	NA	NA	NA	NA	NA	NA	PCDH20	173675	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	67168022	67168413	67168283	Y	NA	NA	NA	NA	NA	NA	PCDH9	634055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	67240182	67240351	67240267	Y	NA	NA	NA	NA	NA	NA	PCDH9	562117	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	67461334	67461726	67461614	Y	PCDH9	NA	NA	NA	NA	NA	PCDH9	340742	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	69231271	69231529	69231442	Y	NA	NA	NA	NA	NA	NA	PCDH9	1428803	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72116042	72116082	72116062	Y	DACH1	NA	NA	NA	NA	NA	H3F3BP1	131117	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72206339	72206570	72206525	Y	DACH1	H3F3BP1	NA	NA	NA	NA	H3F3BP1	40629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72316062	72316072	72316067	Y	NA	NA	NA	NA	NA	NA	H3F3BP1	68863	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72333025	72333078	72333052	Y	NA	NA	NA	NA	NA	NA	H3F3BP1	85826	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72359501	72359862	72359720	Y	NA	NA	NA	NA	NA	NA	DACH1	79468	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	72366390	72366725	72366609	Y	NA	NA	NA	NA	NA	NA	DACH1	72605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72375972	72376220	72376216	Y	NA	NA	NA	NA	NA	NA	DACH1	63110	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72385563	72385700	72385665	Y	NA	NA	NA	NA	NA	NA	DACH1	53630	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	72424218	72424283	72424251	Y	NA	DACH1	NA	NA	NA	NA	DACH1	15047	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	72437849	72438027	72438023	Y	NA	DACH1	NA	NA	NA	NA	DACH1	1303	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	72438548	72439003	72438895	Y	DACH1	DACH1	NA	NA	NA	NA	DACH1	327	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr13	72439142	72439615	72439332	Y	DACH1	NA	NA	NA	NA	NA	DACH1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	74508678	74508943	74508854	Y	KLF12	NA	NA	NA	NA	NA	KLF12	197451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	74708897	74709334	74709161	Y	KLF12	KLF12	NA	NA	NA	NA	KLF12	2503	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	74709487	74710034	74709735	Y	KLF12	KLF12	NA	NA	NA	NA	KLF12	3093	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr13	75933518	75933672	75933595	Y	NA	NA	NA	NA	NA	NA	TBC1D4	120578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	75966064	75966537	75966363	Y	TBC1D4	NA	NA	NA	NA	NA	TBC1D4	87713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	76788256	76788273	76788264	Y	NA	NA	KCTD12	IMR90	Hi-C	24141950	LMO7	595686	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	76906421	76906696	76906559	Y	NA	NA	NA	NA	NA	NA	KCTD12	551844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	77599424	77599520	77599503	Y	NA	RPL7P44,DHX9P1,CLN5,FBXL3	NA	NA	NA	NA	FBXL3	94	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	77898193	77898346	77898226	Y	NA	MYCBP2	NA	NA	NA	NA	MYCBP2	839	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	77899332	77899971	77899636	Y	KCTD12,FBXL3,MYCBP2	MYCBP2	NA	NA	NA	NA	MYCBP2	147	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	78433616	78433842	78433775	Y	NA	NA	EDNRB	IMR90	Hi-C	24141950	EDNRB	58061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	80822359	80822707	80822533	Y	NA	NA	NA	NA	NA	NA	SPRY2	90379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	80916096	80916414	80916232	Y	NA	SPRY2	NA	NA	NA	NA	SPRY2	3010	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	80916799	80917232	80917156	Y	NA	SPRY2	NA	NA	NA	NA	SPRY2	3713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	81436860	81437248	81437054	Y	NA	NA	NA	NA	NA	NA	SPRY2	523774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	93880621	93881133	93881009	Y	NA	GPC6	NA	NA	NA	NA	GPC6	3526	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	93899040	93899272	93899121	Y	NA	GPC6	NA	NA	NA	NA	GPC6	21945	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	93915220	93915506	93915338	Y	NA	GPC6	NA	NA	NA	NA	GPC6	38125	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	94472931	94472950	94472936	Y	NA	NA	NA	NA	NA	NA	SNORD22	453718	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	94551696	94551729	94551713	Y	NA	NA	NA	NA	NA	NA	SNORD22	532483	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	94762314	94762622	94762468	Y	NA	NA	NA	NA	NA	NA	TGDS	483889	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	94785518	94785984	94785813	Y	NA	NA	NA	NA	NA	NA	TGDS	460527	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	95201580	95202169	95201893	Y	NA	TGDS,GPR180	NA	NA	NA	NA	TGDS	44342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	96262046	96262201	96262124	Y	DZIP1	DZIP1	NA	NA	NA	NA	DZIP1	32756	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	96376622	96376681	96376676	Y	DNAJC3	DNAJC3-AS1,DNAJC3	NA	NA	NA	NA	DNAJC3	49229	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	96488083	96488280	96488182	Y	NA	NA	DNAJC3	IMR90	Hi-C	24141950	DNAJC3	160690	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	96498991	96499334	96499248	Y	NA	NA	NA	NA	NA	NA	DNAJC3	171598	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	96517437	96517518	96517478	Y	NA	NA	NA	NA	NA	NA	UGGT2	186218	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	97143722	97143959	97143730	Y	NA	NA	NA	NA	NA	NA	UGGT2	439986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	97302981	97303007	97302994	Y	NA	NA	NA	NA	NA	NA	MBNL2	568681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	97424682	97424992	97424817	Y	NA	NA	NA	NA	NA	NA	MBNL2	446696	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	98824155	98824526	98824341	Y	FARP1	FARP1	NA	NA	NA	NA	FARP1	31339	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	98924976	98925080	98925019	Y	NA	NA	NA	NA	NA	NA	FARP1	132160	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	99121203	99121258	99121231	Y	NA	NA	NA	NA	NA	NA	STK24	106936	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	99123285	99123381	99123333	Y	NA	NA	NA	NA	NA	NA	STK24	104813	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	99128638	99129073	99128919	Y	STK24	NA	NA	NA	NA	NA	STK24	99121	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	99130571	99130717	99130631	Y	STK24	NA	NA	NA	NA	NA	STK24	97477	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	99956842	99956954	99956899	Y	GPR183	NA	NA	NA	NA	NA	H2AFZP3	90830	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	99991522	99991909	99991574	Y	NA	NA	NA	NA	NA	NA	H2AFZP3	125510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	100010340	100010660	100010510	Y	DOCK9,UBAC2,UBAC2,GPR183,CLYBL	NA	NA	NA	NA	NA	TM9SF2	141011	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	100013491	100013836	100013585	Y	DOCK9,UBAC2,UBAC2,GPR18,GPR183,CLYBL	NA	NA	NA	NA	NA	TM9SF2	137835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	101041976	101042276	101042034	Y	NA	NA	NA	NA	NA	NA	RPS26P47	148252	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	103344536	103344922	103344729	Y	NA	NA	NA	NA	NA	NA	TPP2	97183	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	105315212	105315547	105315380	Y	NA	NA	NA	NA	NA	NA	LINC00460	1711364	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	105792553	105792815	105792695	Y	DAOA	NA	NA	NA	NA	NA	LINC00460	1234096	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	106753025	106753272	106753030	Y	ARGLU1	NA	EFNB2	IMR90	Hi-C	24141950	LINC00460	273639	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	106810133	106810294	106810212	Y	NA	NA	EFNB2,LINC00460	IMR90	Hi-C	24141950	LINC00460	216617	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	107448247	107448283	107448269	Y	NA	NA	NA	NA	NA	NA	ARGLU1	229735	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	107674329	107674536	107674433	Y	ARGLU1	NA	NA	NA	NA	NA	ARGLU1	455817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	108099145	108099375	108099322	Y	FAM155A	NA	NA	NA	NA	NA	FAM155A	417708	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	108153519	108153767	108153691	Y	NA	NA	NA	NA	NA	NA	FAM155A	363316	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	108310994	108311341	108311278	Y	NA	NA	NA	NA	NA	NA	FAM155A	205742	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr13	108407171	108407488	108407466	Y	NA	NA	NA	NA	NA	NA	FAM155A	109595	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr13	108520131	108520835	108520801	Y	LIG4,FAM155A	FAM155A	NA	NA	NA	NA	FAM155A	3048	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	108919755	108919960	108919910	Y	TNFSF13B,LIG4,ABHD13	NA	NA	NA	NA	NA	ABHD13	51028	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	111061947	111062361	111062286	Y	NA	NA	NA	NA	NA	NA	COL4A1	104451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	111589420	111590157	111589779	Y	NA	ANKRD10	ARHGEF7,LINC00346	IMR90	Hi-C	24141950	ANKRD10	24004	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr13	113179985	113180373	113180107	Y	NA	NA	NA	NA	NA	NA	TUBGCP3	60108	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	113294900	113294930	113294914	Y	C13orf35	ATP11A	NA	NA	NA	NA	ATP11A	47713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	113421890	113422034	113421962	Y	C13orf35	NA	NA	NA	NA	NA	ATP11A	79247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	113806516	113806910	113806731	Y	ATP11A,CUL4A	NA	PROZ	IMR90	Hi-C	24141950	CUL4A	53642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114127046	114127213	114127130	Y	GRTP1,DCUN1D2	DCUN1D2,TMCO3	NA	NA	NA	NA	DCUN1D2	16054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114270892	114271213	114271013	Y	DCUN1D2,TMCO3	TFDP1	NA	NA	NA	NA	TFDP1	33879	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114322811	114323141	114322995	Y	GRK1	NA	NA	NA	NA	NA	TFDP1	85798	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114445132	114445240	114445183	Y	RASA3	NA	NA	NA	NA	NA	GAS6	119806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114809032	114809271	114809129	Y	NA	NA	NA	NA	NA	NA	RASA3	86815	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr13	114810103	114810577	114810313	Y	NA	NA	NA	NA	NA	NA	RASA3	85509	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114864762	114865011	114864824	Y	RASA3	RASA3	NA	NA	NA	NA	RASA3	31075	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114875113	114875384	114875282	Y	RASA3	RASA3	NA	NA	NA	NA	RASA3	20702	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114892702	114892820	114892783	Y	NA	RASA3	NA	NA	NA	NA	RASA3	3266	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	114893588	114893901	114893716	Y	NA	RASA3	NA	NA	NA	NA	RASA3	2185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr13	115046177	115046319	115046229	Y	RASA3	CDC16,UPF3A,CHAMP1	NA	NA	NA	NA	UPF3A	1118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	21150605	21151121	21150987	Y	TEP1,TMEM55B,PNP,ZNF219,ARHGEF40	RNASE4,ANG	NA	NA	NA	NA	ANG	269	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	21151333	21151694	21151411	Y	NA	RNASE4,ANG	NA	NA	NA	NA	ANG	997	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr14	21339031	21339328	21339180	Y	NA	NA	NA	NA	NA	NA	METTL17	116601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	21540493	21540634	21540528	Y	RNASE6,TOX4,HNRNPC,ARHGEF40	ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	NDRG2	3462	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	21564675	21565076	21564876	Y	NA	ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	ZNF219	5805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	21660147	21660368	21660311	Y	NA	NA	NA	NA	NA	NA	HNRNPC	75285	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	21684818	21685080	21685024	Y	OR10G2,OR4E2,OR10G3,RNASE8,OR5AU1	NA	NA	NA	NA	NA	HNRNPC	50573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	22807854	22807966	22807896	Y	NA	NA	NA	NA	NA	NA	AE000661.37	141982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	22952580	22952652	22952617	Y	REM2	AE000661.37,TRAJ47,TRAJ39,TRAJ10	SLC7A7	IMR90	Hi-C	24141950	AE000661.37	2632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	23015324	23015612	23015395	Y	RBM23	TRAJ39,TRAJ10,DAD1,ABHD4	NA	NA	NA	NA	TRAJ10	14879	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	23466095	23466339	23466236	Y	CDH24,ACIN1	MIR4707,HAUS4,AJUBA,C14orf93,PSMB5	NA	NA	NA	NA	C14orf93	11036	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	23466494	23466910	23466688	Y	CDH24,C14orf93	MIR4707,HAUS4,AJUBA,C14orf93,PSMB5	NA	NA	NA	NA	C14orf93	10465	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr14	24014427	24014724	24014635	Y	DHRS4L2,DHRS4L2,BCL2L2,BCL2L2,PABPN1,SLC22A17,SLC22A17,CMTM5,ZFHX2,THTPA,JPH4	RP11-66N24.4,THTPA,ZFHX2,AP1G2,JPH4	NA	NA	NA	NA	THTPA	8492	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	24016944	24017157	24017064	Y	NA	RP11-66N24.4,THTPA,ZFHX2,AP1G2,JPH4	NA	NA	NA	NA	THTPA	6059	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr14	24163763	24164098	24163827	Y	NA	NA	NA	NA	NA	NA	DHRS2	66439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	24454112	24454320	24454216	Y	DHRS4L2,DHRS4L2	DHRS4,DHRS4L2	NA	NA	NA	NA	DHRS4L2	16964	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	24481106	24481351	24481229	Y	NA	DHRS4L2,LRRC16B	NA	NA	NA	NA	LRRC16B	37855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	24891908	24892270	24892086	Y	NA	NYNRIN,KHNYN,SDR39U1	NA	NA	NA	NA	KHNYN	4222	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	25580202	25580566	25580328	Y	STXBP6	NA	STXBP6	IMR90	Hi-C	24141950	HMGN2P6	153976	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	31360303	31360625	31360494	Y	NA	COCH	NA	NA	NA	NA	COCH	18583	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr14	31400109	31400220	31400192	Y	NA	NA	NA	NA	NA	NA	COCH	58389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	32597823	32598061	32597946	Y	NUBPL	NA	NA	NA	NA	NA	ARHGAP5-AS1	53824	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	32672212	32672871	32672506	Y	ARHGAP5	NA	NUBPL,ARHGAP5-AS1,ARHGAP5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	AKAP6	123608	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	32953597	32954289	32954012	Y	ARHGAP5,AKAP6,NPAS3	RP11-320M16.1	NA	NA	NA	NA	RP11-320M16.1	1591	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr14	32976944	32977104	32977024	Y	NA	RP11-320M16.1	NA	NA	NA	NA	RP11-320M16.1	24938	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	33402784	33403168	33402896	Y	NPAS3	NPAS3	NA	NA	NA	NA	NPAS3	645	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	33756619	33756719	33756669	Y	NA	NA	NA	NA	NA	NA	NPAS3	354480	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	34529400	34529785	34529476	Y	EGLN3	NA	EGLN3	K562,MCF7	ChIA-PET	22265404	SPTSSA	399777	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	34845435	34845489	34845462	Y	NA	NA	NA	NA	NA	NA	SPTSSA	84073	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35084533	35084797	35084665	Y	EAPP	SNX6	NA	NA	NA	NA	SNX6	12592	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35274619	35275001	35274810	Y	PPP2R3C,BAZ1A	NA	NA	NA	NA	NA	RP11-73E17.2	66548	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35325148	35325514	35325424	Y	PSMA6,PPP2R3C,BAZ1A	RP11-73E17.2,BAZ1A	NA	NA	NA	NA	RP11-73E17.2	16035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35628271	35628433	35628369	Y	NA	PPP2R3C,KIAA0391	NA	NA	NA	NA	KIAA0391	38516	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	35754543	35755119	35754804	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	8704	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35755957	35756376	35756177	Y	BAZ1A,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	10118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35767605	35767844	35767749	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	21766	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	35855857	35856187	35856101	Y	NA	RP11-561B11.1,NFKBIA	NA	NA	NA	NA	RP11-561B11.1	88	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	36641300	36641610	36641453	Y	NA	NA	SFTA3	IMR90	Hi-C	24141950	MBIP	146272	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	36778207	36778309	36778259	Y	NA	MBIP	NA	NA	NA	NA	MBIP	9573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	37352255	37352398	37352316	Y	NA	NA	NA	NA	NA	NA	MIPOL1	312720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	37785804	37785829	37785809	Y	NA	NA	NA	NA	NA	NA	MIPOL1	120686	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	38052089	38052429	38052199	Y	NA	TTC6,FOXA1	NA	NA	NA	NA	TTC6	10623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	39559553	39559840	39559693	Y	NA	SEC23A,GEMIN2	NA	NA	NA	NA	SEC23A	17010	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	39737909	39738305	39738022	Y	NA	CTAGE5	NA	NA	NA	NA	CTAGE5	5421	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	39900071	39900466	39900211	Y	PNN,CTAGE5,FBXO33	FBXO33	NA	NA	NA	NA	FBXO33	367	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	42075138	42075996	42075609	Y	LRFN5	LRFN5	NA	NA	NA	NA	LRFN5	365	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	42158111	42158422	42158211	Y	LRFN5	NA	NA	NA	NA	NA	LRFN5	83338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	43989536	43989546	43989541	Y	NA	NA	NA	NA	NA	NA	C14orf28	1374952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	45554390	45554749	45554468	Y	NA	KLHL28,PRPF39,FKBP3,FANCM	NA	NA	NA	NA	PRPF39	3088	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	45714299	45714525	45714379	Y	NA	MIS18BP1	NA	NA	NA	NA	MIS18BP1	6218	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	45721298	45721397	45721336	Y	KLHL28,PRPF39,FANCM,MIS18BP1	MIS18BP1	NA	NA	NA	NA	MIS18BP1	555	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	45723245	45723364	45723320	Y	NA	MIS18BP1	NA	NA	NA	NA	MIS18BP1	2502	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	46620797	46620809	46620803	Y	NA	NA	NA	NA	NA	NA	MIS18BP1	900054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	48030000	48030393	48030347	Y	MDGA2,MDGA2	NA	NA	NA	NA	NA	RPL13AP2	361693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	49000423	49000807	49000609	Y	NA	NA	NA	NA	NA	NA	RN7SL1	1050490	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	50256678	50256775	50256761	Y	NA	KLHDC2	NA	NA	NA	NA	KLHDC2	24352	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	50328882	50329315	50329091	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	10961	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	50329576	50329987	50329651	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	11655	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr14	50334846	50335244	50334992	Y	RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6	NEMF,ARF6	SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	16925	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr14	50497743	50497949	50497828	Y	RPL36AL,ARF6,C14orf182	NA	C14orf182,SOS2,C14orf183,ARF6,METTL21D	IMR90	Hi-C	24141950	ARF6	139933	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	50648447	50648735	50648723	Y	NA	SOS2	NA	NA	NA	NA	SOS2	47541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	50799629	50799645	50799635	Y	NA	ATP5S,L2HGDH	NA	NA	NA	NA	L2HGDH	22363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	51367871	51368235	51368053	Y	NA	ABHD12B,PYGL	NA	NA	NA	NA	ABHD12B	30993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	51460024	51460383	51460203	Y	TRIM9	NA	NA	NA	NA	NA	PYGL	50570	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	51975090	51975414	51975252	Y	NA	FRMD6	NA	NA	NA	NA	FRMD6	21272	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	52331196	52331799	52331519	Y	NA	GNG2	NA	NA	NA	NA	GNG2	40283	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	52336144	52336756	52336579	Y	PTGER2,GNG2	GNG2	NA	NA	NA	NA	GNG2	45231	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	52339910	52340287	52340136	Y	PTGER2,PTGDR,GNG2	GNG2	NA	NA	NA	NA	GNG2	48997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	52349798	52350236	52349885	Y	PTGDR,GNG2	NA	NA	NA	NA	NA	GNG2	58885	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	52372298	52373220	52372436	Y	PTGER2,GNG2	NA	NA	NA	NA	NA	C14orf166	80973	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	52774627	52775077	52774946	Y	GNG2,PTGER2	PTGER2	NA	NA	NA	NA	PTGER2	3946	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	53020677	53020806	53020735	Y	PTGDR,TXNDC16,GPR137C	TXNDC16,GPR137C	NA	NA	NA	NA	GPR137C	2811	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr14	53399403	53399746	53399574	Y	NA	FERMT2	NA	NA	NA	NA	FERMT2	17407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	53416335	53416646	53416599	Y	GPR137C	FERMT2	NA	NA	NA	NA	FERMT2	507	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	54833964	54834357	54834051	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	27210	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	54900763	54901015	54900977	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	39196	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	54902274	54902529	54902415	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	40707	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	54954614	54954684	54954648	Y	NA	GMFB,CGRRF1	NA	NA	NA	NA	GMFB	700	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	55439267	55439511	55439438	Y	NA	NA	NA	NA	NA	NA	WDHD1	52312	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	55765939	55766288	55766115	Y	GCH1	FBXO34,RP11-665C16.6	NA	NA	NA	NA	RP11-665C16.6	29146	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	55770530	55770967	55770803	Y	GCH1,MAPK1IP1L,LGALS3,FBXO34,FBXO34	FBXO34,RP11-665C16.6	NA	NA	NA	NA	RP11-665C16.6	33737	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	56047594	56047945	56047904	Y	NA	KTN1,KTN1-AS1	NA	NA	NA	NA	KTN1-AS1	2766	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	56472041	56472329	56472134	Y	NA	NA	PELI2	IMR90	Hi-C	24141950	PELI2	110203	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	57038446	57038723	57038585	Y	NA	NA	C14orf101	K562	ChIA-PET	22265404	PELI2	455914	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	57047832	57047974	57047932	Y	PELI2,C14orf101	NA	NA	NA	NA	NA	PELI2	465300	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	57378201	57378572	57378356	Y	NA	NA	NA	NA	NA	NA	EXOC5	355154	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	57725682	57725794	57725735	Y	NA	EXOC5	NA	NA	NA	NA	EXOC5	7932	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	58705309	58705629	58705462	Y	ARID4A	ACTR10,PSMA3	NA	NA	NA	NA	PSMA3	3920	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	58911911	58912089	58912000	Y	KIAA0586	KIAA0586,TIMM9	NA	NA	NA	NA	TIMM9	19579	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	59002332	59002438	59002384	Y	NA	NA	NA	NA	NA	NA	DACT1	96247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	59654580	59654708	59654599	Y	NA	DAAM1	NA	NA	NA	NA	DAAM1	1216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	59656513	59656908	59656842	Y	DAAM1	DAAM1	NA	NA	NA	NA	DAAM1	3149	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr14	59742406	59742712	59742574	Y	DAAM1	NA	NA	NA	NA	NA	DAAM1	89042	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	59744882	59745126	59745004	Y	NA	NA	NA	NA	NA	NA	DAAM1	91518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	59800555	59800809	59800631	Y	GPR135	NA	NA	NA	NA	NA	GPR135	129251	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	59861080	59861273	59861260	Y	DAAM1,RTN1	NA	DAAM1	IMR90	Hi-C	24141950	GPR135	68787	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	60618583	60618767	60618659	Y	PPM1A,C14orf135,DHRS7	DHRS7	NA	NA	NA	NA	DHRS7	15807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	60679186	60679974	60679676	Y	NA	DHRS7,PPM1A,CTD-2184C24.2	NA	NA	NA	NA	PPM1A	30496	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	61188145	61188381	61188263	Y	NA	SIX4,MNAT1	NA	NA	NA	NA	SIX4	685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	61456427	61456721	61456474	Y	SLC38A6	RP11-193F5.4,SLC38A6,TRMT5	NA	NA	NA	NA	TRMT5	10351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	61803783	61804036	61803882	Y	PRKCH	NA	NA	NA	NA	NA	PRKCH	151506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	61873165	61873393	61873279	Y	NA	NA	NA	NA	NA	NA	PRKCH	220888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	63159002	63159168	63159087	Y	NA	NA	NA	NA	NA	NA	RHOJ	509664	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	64180685	64181078	64180882	Y	NA	SGPP1	NA	NA	NA	NA	SGPP1	11679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	64185455	64185764	64185678	Y	PPP2R5E,SYNE2,WDR89,WDR89,SGPP1	SGPP1	NA	NA	NA	NA	SGPP1	6993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	64584533	64584935	64584736	Y	NA	NA	NA	NA	NA	NA	RP11-544I20.2	218382	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	64975156	64975343	64975202	Y	NA	AKAP5,ZBTB1,ZBTB25,HSPA2,PPP1R36	NA	NA	NA	NA	ZBTB25	5225	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	65006188	65006351	65006244	Y	NA	ZBTB1,ZBTB25,HSPA2,PPP1R36	NA	NA	NA	NA	HSPA2	5565	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	65224783	65224915	65224850	Y	ZBTB1,PLEKHG3	NA	NA	NA	NA	NA	PLEKHG3	55963	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	65229015	65229197	65229106	Y	SPTB,PLEKHG3	NA	NA	NA	NA	NA	PLEKHG3	60195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	65347160	65347466	65347258	Y	RAB15	SPTB,CHURC1,CHURC1-FNTB,FNTB	SPTB	IMR90	Hi-C	24141950	SPTB	2559	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr14	65746592	65747003	65746788	Y	NA	NA	LOC645431,FUT8,MIR4708	IMR90	Hi-C	24141950	FUT8	128307	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	65905118	65905243	65905181	Y	NA	FUT8	NA	NA	NA	NA	FUT8	29808	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	66126309	66126626	66126333	Y	NA	NA	NA	NA	NA	NA	FUT8	250999	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr14	67416708	67417057	67416792	Y	GPHN	NA	NA	NA	NA	NA	MPP5	288769	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	67478288	67478352	67478320	Y	NA	NA	NA	NA	NA	NA	MPP5	227474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	67562927	67563276	67562937	Y	TMEM229B,PLEKHH1	NA	NA	NA	NA	NA	MPP5	142550	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	67728313	67728625	67728469	Y	NA	MPP5	NA	NA	NA	NA	MPP5	22487	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	67751261	67751573	67751281	Y	RDH12,PLEKHH1,PIGH	MPP5	NA	NA	NA	NA	MPP5	45435	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr14	67809024	67809296	67809169	Y	RDH12,MPP5,PLEKHH1	EIF2S1,ATP6V1D	NA	NA	NA	NA	EIF2S1	15418	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	68161499	68161767	68161616	Y	PLEK2	VTI1B,RDH11	NA	NA	NA	NA	RDH11	968	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr14	68320437	68320759	68320587	Y	ZFYVE26	ZFYVE26,RAD51B	NA	NA	NA	NA	RAD51B	35941	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	68409175	68409464	68409327	Y	NA	NA	NA	NA	NA	NA	RAD51B	124679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	68555311	68555805	68555391	Y	NA	NA	NA	NA	NA	NA	RAD51B	270815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	68614207	68614598	68614344	Y	NA	NA	NA	NA	NA	NA	PPIAP6	272315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	68677466	68677903	68677626	Y	ZFYVE26	NA	NA	NA	NA	NA	PPIAP6	209010	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	69576488	69576915	69576681	Y	NA	DCAF5	NA	NA	NA	NA	DCAF5	40952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	69598076	69598493	69598218	Y	NA	DCAF5	NA	NA	NA	NA	DCAF5	19374	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	69618210	69618757	69618360	Y	NA	DCAF5,EXD2	NA	NA	NA	NA	DCAF5	343	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	69867695	69867997	69867846	Y	NA	SLC39A9,ERH	NA	NA	NA	NA	ERH	4351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	70183177	70183631	70183340	Y	KIAA0247,SRSF5,SRSF5	SRSF5	NA	NA	NA	NA	SRSF5	7986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	70251267	70251371	70251319	Y	SLC10A1	NA	NA	NA	NA	NA	SRSF5	59650	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	70803999	70804244	70804143	Y	NA	COX16	NA	NA	NA	NA	COX16	20204	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	70844763	70845165	70845114	Y	NA	COX16,SYNJ2BP	NA	NA	NA	NA	COX16	20315	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr14	71425019	71425182	71425094	Y	NA	NA	NA	NA	NA	NA	PCNX	52897	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	72438276	72438928	72438440	Y	NA	NA	NA	NA	NA	NA	RP1-261D10.2	651745	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	72530304	72530701	72530359	Y	RGS6,RGS6	NA	NA	NA	NA	NA	RP1-261D10.2	743773	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	73100225	73100572	73100516	Y	NA	NA	RGS6,DPF3	IMR90	Hi-C	24141950	DPF3	258237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	73110081	73110359	73110171	Y	NA	NA	RGS6,DPF3,DCAF4	IMR90	Hi-C	24141950	DPF3	248450	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	73585185	73585324	73585255	Y	NA	PSEN1	NA	NA	NA	NA	PSEN1	15802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	73595262	73595380	73595321	Y	NA	PSEN1	NA	NA	NA	NA	PSEN1	5746	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	73824884	73825148	73825019	Y	ZFYVE1,ZFYVE1,RBM25,PSEN1,NUMB	NA	NA	NA	NA	NA	NUMB	103200	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	74140666	74140779	74140723	Y	FAM161B	DNAL1,PNMA1	NA	NA	NA	NA	DNAL1	31088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	74208106	74208498	74208298	Y	C14orf43	PNMA1,RP5-1021I20.1	NA	NA	NA	NA	PNMA1	28978	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	74224542	74224784	74224663	Y	NA	PNMA1,RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	27279	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	74607211	74607609	74607410	Y	NA	NA	VSX2	IMR90	Hi-C	24141950	LIN52	57712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	75125565	75125963	75125764	Y	NA	NA	NA	NA	NA	NA	FCF1	51884	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	75448208	75448549	75448379	Y	NA	PGF,EIF2B2	MLH3,ZC2HC1C,NEK9,PGF,EIF2B2,ACYP1,RPS6KL1,DLST	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	EIF2B2	19065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	75521336	75521721	75521672	Y	MLH3,ACYP1	MLH3,ACYP1	NA	NA	NA	NA	MLH3	5101	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr14	75808435	75808603	75808525	Y	FOS,JDP2,FLVCR2,FLVCR2	NA	JDP2,BATF	IMR90	Hi-C	24141950	FOS	64958	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	76080573	76080818	76080676	Y	FOS,JDP2,BATF,FLVCR2,FLVCR2	FLVCR2,RP11-507E23.1,TTLL5,C14orf1	NA	NA	NA	NA	TTLL5	17150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	76234838	76235006	76234846	Y	NA	NA	TGFB3,IFT43	IMR90	Hi-C	24141950	C14orf1	109306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	76243945	76244101	76244023	Y	TGFB3	NA	NA	NA	NA	NA	C14orf1	118413	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	76342346	76342569	76342455	Y	BATF,TGFB3	IFT43	TGFB3	IMR90	Hi-C	24141950	IFT43	23910	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	76395057	76395394	76395222	Y	ESRRB,TGFB3	IFT43	NA	NA	NA	NA	IFT43	28578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	76513976	76514095	76514005	Y	NA	NA	NA	NA	NA	NA	TGFB3	66642	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	77384980	77385465	77385224	Y	VASH1	RP11-488C13.1,RP11-7F17.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	33887	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	77386302	77386621	77386483	Y	IRF2BPL	RP11-488C13.1,RP11-7F17.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	35209	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr14	77386872	77387221	77387005	Y	ZDHHC22	RP11-488C13.1,RP11-7F17.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	35779	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	77388817	77389330	77389083	Y	ZDHHC22,NGB,VASH1,KIAA1737,IRF2BPL	RP11-488C13.1,RP11-7F17.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	37724	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	77431067	77431579	77431238	Y	NA	RP11-7F17.1	IRF2BPL	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-7F17.1	1447	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	77499482	77500543	77500476	Y	VASH1,C14orf166B,IRF2BPL	IRF2BPL	KIAA1737,POMT2,GSTZ1	MCF7	ChIA-PET	22265404	IRF2BPL	6448	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr14	77577466	77577695	77577651	Y	NA	TMEM63C,ZDHHC22	NA	NA	NA	NA	TMEM63C	3216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	77639599	77639692	77639653	Y	NA	ZDHHC22	C14orf166B,ZDHHC22,POMT2,GSTZ1,KIAA1737,TMEM63C,NGB,MIR1260A,TMED8	IMR90	Hi-C	24141950	ZDHHC22	32522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	78836271	78836672	78836374	Y	NA	NA	NA	NA	NA	NA	NRXN3	129537	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	79756853	79757329	79757011	Y	NA	NA	NA	NA	NA	NA	NRXN3	1050119	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	80284396	80284755	80284543	Y	NA	NA	NA	NA	NA	NA	TSHR	1134578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	81019191	81019257	81019224	Y	DIO2,CEP128	NA	NA	NA	NA	NA	TSHR	400076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	81375179	81375565	81375372	Y	STON2,CEP128	TSHR,CEP128	NA	NA	NA	NA	TSHR	43768	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	81484958	81485153	81484991	Y	TSHR	NA	NA	NA	NA	NA	CEP128	61097	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	81503760	81504107	81503844	Y	TSHR	NA	NA	NA	NA	NA	CEP128	79899	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	81685513	81686063	81685724	Y	GTF2A1,GTF2A1	SNORA79,DYNLL1P1	NA	NA	NA	NA	GTF2A1	0	CAGE	JHUCS-1	hg19	FANTOM5	5.83251274934474
chr14	81713528	81713897	81713622	Y	NA	SNORA79,GTF2A1,DYNLL1P1	NA	NA	NA	NA	DYNLL1P1	2621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	86053629	86053936	86053651	Y	NA	NA	NA	NA	NA	NA	FLRT2	59141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	89671493	89671906	89671673	Y	NA	NA	NA	NA	NA	NA	CAP2P1	84032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	89772713	89772723	89772718	Y	NA	CAP2P1	NA	NA	NA	NA	CAP2P1	16775	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	90167936	90168219	90168049	Y	TDP1,FOXN3,FOXN3	NA	FOXN3,LOC400236,PRO1768,EFCAB11	IMR90	Hi-C	24141950	FOXN3	84443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	90378074	90378289	90378205	Y	FOXN3,FOXN3,TDP1	EFCAB11,TDP1	NA	NA	NA	NA	EFCAB11	40832	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	90378938	90379536	90379158	Y	FOXN3,FOXN3,KCNK13	EFCAB11,TDP1	NA	NA	NA	NA	EFCAB11	39585	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	90465200	90465384	90465297	Y	NA	EFCAB11,TDP1	NA	NA	NA	NA	TDP1	45917	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	90988934	90989119	90989019	Y	NA	NA	NA	NA	NA	NA	CALM1	128088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	91556459	91556738	91556599	Y	NA	C14orf159,RPS6KA5	RPS6KA5,CCDC88C	IMR90	Hi-C	24141950	RPS6KA5	31479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	91729802	91729926	91729864	Y	GPR68,GPR68	NA	GPR68	K562	ChIA-PET	22265404	CCDC88C	152262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	91730791	91731194	91731191	Y	NA	NA	GPR68	K562	ChIA-PET	22265404	CCDC88C	150994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	91734470	91734656	91734563	Y	NA	NA	GPR68	K562	ChIA-PET	22265404	CCDC88C	147532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	91814664	91814951	91814783	Y	RPS6KA5,C14orf159,SMEK1,CCDC88C	NA	NA	NA	NA	NA	CCDC88C	67237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	92572132	92572295	92572249	Y	CATSPERB,SLC24A4,SLC24A4,RIN3,ATXN3	ATXN3,NDUFB1,CPSF2	NA	NA	NA	NA	ATXN3	1167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	92997430	92998230	92997929	Y	ATXN3,SLC24A4,SLC24A4,RIN3	RIN3	NA	NA	NA	NA	RIN3	19312	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	93030823	93030949	93030917	Y	ATXN3,LGMN	NA	NA	NA	NA	NA	RIN3	52705	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	93121718	93122010	93121905	Y	ITPK1,SLC24A4,SLC24A4,RIN3	NA	NA	NA	NA	NA	LGMN	91037	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	93252078	93252440	93252261	Y	MOAP1,C14orf142,C14orf109,C14orf109,SLC24A4,SLC24A4,RIN3	LGMN,GOLGA5	GOLGA5	K562	ChIA-PET	22265404	GOLGA5	6136	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	95064751	95064770	95064761	Y	SERPINA10,SERPINA10,SERPINA6,SERPINA1,SERPINA11,SERPINA12,SERPINA4,SERPINA5,SERPINA3	SERPINA3	NA	NA	NA	NA	SERPINA3	11944	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	95734707	95735043	95734878	Y	NA	CLMN	NA	NA	NA	NA	CLMN	49200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	96565122	96565402	96565262	Y	NA	NA	NA	NA	NA	NA	C14orf132	61461	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	97043507	97043643	97043575	Y	NA	NA	NA	NA	NA	NA	PAPOLA	77737	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	97465115	97465271	97465193	Y	NA	NA	NA	NA	NA	NA	VRK1	203474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	98011080	98011227	98011154	Y	NA	NA	BCL11B	IMR90	Hi-C	24141950	C14orf64	431234	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	99439262	99439638	99439565	Y	NA	NA	NA	NA	NA	NA	SETD3	505578	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr14	99827366	99827674	99827539	Y	NA	NA	NA	NA	NA	NA	SETD3	117542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	99934490	99934508	99934499	Y	EML1	SETD3,CCNK	NA	NA	NA	NA	SETD3	10708	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100029558	100029810	100029707	Y	NA	CCDC85C,RP11-543C4.1	NA	NA	NA	NA	CCDC85C	38553	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	100071651	100072022	100071781	Y	NA	CCDC85C,RP11-543C4.1,HHIPL1	NA	NA	NA	NA	RP11-543C4.1	2758	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	100463833	100464185	100464009	Y	NA	NA	EVL,YY1,DEGS2	IMR90	Hi-C	24141950	DEGS2	160315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100486645	100486967	100486738	Y	NA	NA	EVL,DEGS2	IMR90	Hi-C	24141950	DEGS2	137533	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100534854	100535453	100535220	Y	YY1,EVL	NA	NA	NA	NA	NA	DEGS2	89047	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100566376	100566553	100566536	Y	EVL	NA	NA	NA	NA	NA	DEGS2	57947	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100659173	100659604	100659490	Y	NA	DEGS2,YY1,RP11-638I2.4	DEGS2,YY1,EVL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	DEGS2	34673	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr14	100687969	100688087	100687996	Y	NA	YY1,RP11-638I2.4	YY1	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	YY1	14548	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100751761	100751840	100751790	Y	NA	YY1,RP11-638I2.4,SLC25A29	NA	NA	NA	NA	SLC25A29	19044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	100768169	100768349	100768287	Y	NA	SLC25A29	NA	NA	NA	NA	SLC25A29	2535	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	101023349	101023562	101023455	Y	BEGAIN	BEGAIN	NA	NA	NA	NA	BEGAIN	28188	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	101049817	101049857	101049837	Y	DLK1,BEGAIN	BEGAIN	WDR25,MEG3,BEGAIN	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BEGAIN	1893	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	102414226	102414964	102414565	Y	NA	DYNC1H1	NA	NA	NA	NA	DYNC1H1	13901	CAGE	JHUCS-1	hg19	FANTOM5	3.66615087101669
chr14	102868139	102868468	102868196	Y	HSP90AA1,RCOR1,TECPR2	CINP,TECPR2	NA	NA	NA	NA	TECPR2	40839	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	102991046	102991386	102991124	Y	NA	ANKRD9	ANKRD9,RCOR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANKRD9	16910	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	102991831	102991939	102991900	Y	NA	ANKRD9	ANKRD9,RCOR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANKRD9	17695	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	103266656	103267057	103266785	Y	NA	TRAF3	CDC42BPB,AMN	IMR90	Hi-C	24141950	TRAF3	24843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	103557952	103558007	103557980	Y	NA	CDC42BPB	CDC42BPB,EXOC3L4,TNFAIP2,EIF5,LOC100131366,MARK3	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CDC42BPB	36153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	103848844	103849188	103848935	Y	TNFAIP2,EIF5,MARK3	MARK3	NA	NA	NA	NA	MARK3	541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	103884711	103885085	103884989	Y	TNFAIP2,EIF5,EIF5,MARK3	MARK3	NA	NA	NA	NA	MARK3	34982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	103954462	103954719	103954539	Y	MARK3,KLC1	CKB,TRMT61A	NA	NA	NA	NA	CKB	32729	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	104228992	104229118	104229080	Y	NA	XRCC3,ZFYVE21	NA	NA	NA	NA	ZFYVE21	48925	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	105144100	105144955	105144117	Y	GPR132,AKT1	INF2,ADSSL1	NA	NA	NA	NA	INF2	8988	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr14	105265888	105266206	105266005	Y	NA	SIVA1,AKT1	NA	NA	NA	NA	AKT1	5800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	105790841	105790905	105790875	Y	NA	PACS2,BRF1	NA	NA	NA	NA	BRF1	10915	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr14	105947921	105948133	105948082	Y	NA	CRIP2,CRIP1,C14orf80,TMEM121	NA	NA	NA	NA	CRIP1	3403	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr14	105948139	105949025	105948432	Y	NA	CRIP2,CRIP1,C14orf80,TMEM121	NA	NA	NA	NA	CRIP1	2511	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr14	106029905	106030244	106030075	Y	NA	TMEM121	NA	NA	NA	NA	TMEM121	38965	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	20547295	20547641	20547374	Y	NA	NA	LOC348120,REREP3,POTEB	IMR90	Hi-C	24141950	RP11-603B24.2	1996448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	22908894	22909338	22909142	Y	NA	CYFIP1	NA	NA	NA	NA	CYFIP1	18889	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	25554216	25554517	25554319	Y	NA	NA	NA	NA	NA	NA	UBE3A	127611	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	25564293	25564526	25564383	Y	SNRPN,SNURF,SNRPN,UBE3A,UBE3A	NA	NA	NA	NA	NA	UBE3A	117602	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	25565589	25566847	25566046	Y	SNRPN,SNURF,SNRPN,UBE3A,UBE3A	NA	NA	NA	NA	NA	UBE3A	115281	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr15	25577365	25577592	25577422	Y	NA	NA	NA	NA	NA	NA	UBE3A	104536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	25606189	25606253	25606221	Y	UBE3A	NA	NA	NA	NA	NA	UBE3A	75875	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	25614491	25614606	25614563	Y	NA	NA	NA	NA	NA	NA	UBE3A	67522	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	25624568	25624607	25624588	Y	NA	NA	NA	NA	NA	NA	UBE3A	57521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	25625771	25626455	25625879	Y	SNURF,SNRPN	NA	NA	NA	NA	NA	UBE3A	55673	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	26327449	26327665	26327505	Y	NA	NA	ATP10A,LOC100128714	IMR90	Hi-C	24141950	UBE3A	645321	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr15	26854717	26854952	26854835	Y	NA	NA	NA	NA	NA	NA	GABRB3	327734	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	26914563	26914637	26914600	Y	GABRB3,GABRB3,GABRA5,GABRA5,GABRB3	NA	NA	NA	NA	NA	GABRB3	268049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	27300157	27300177	27300166	Y	NA	NA	NA	NA	NA	NA	GABRG3	85728	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	30022522	30022814	30022806	Y	FAM189A1	NA	NA	NA	NA	NA	TJP1	236254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	31215782	31215951	31215851	Y	FAN1,FAN1,MTMR10	FAN1	NA	NA	NA	NA	FAN1	21727	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	31689645	31689781	31689725	Y	MTMR10,KLF13	NA	NA	NA	NA	NA	KLF13	72587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	32020218	32020316	32020267	Y	NA	NA	OTUD7A	IMR90	Hi-C	24141950	OTUD7A	140676	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	32140399	32140767	32140585	Y	NA	OTUD7A	NA	NA	NA	NA	OTUD7A	20225	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	33111010	33111355	33111242	Y	NA	NA	NA	NA	NA	NA	GREM1	102835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	33134248	33134560	33134512	Y	NA	NA	GREM1	IMR90	Hi-C	24141950	GREM1	126073	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	33494122	33494379	33494251	Y	NA	NA	NA	NA	NA	NA	GREM1	485947	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	34290038	34290177	34290053	Y	NA	AVEN	NA	NA	NA	NA	AVEN	39200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	34421770	34422050	34421910	Y	NA	PGBD4	NA	NA	NA	NA	PGBD4	29496	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	34531616	34532056	34531745	Y	NA	NA	NA	NA	NA	NA	NOP10	101322	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	34807090	34807442	34807248	Y	NA	NA	NA	NA	NA	NA	GOLGA8A,GOLGA8B	71262	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr15	35588902	35588944	35588923	Y	NA	NA	ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466	IMR90	Hi-C	24141950	ZNF770	310414	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	35650165	35650403	35650284	Y	NA	NA	NA	NA	NA	NA	ZNF770	371677	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	37278170	37278456	37278428	Y	NA	NA	NA	NA	NA	NA	MEIS2	113048	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	37403099	37403474	37403147	Y	MEIS2,MEIS2,MEIS2,MEIS2	MEIS2	LOC100507466,C15orf41,MEIS2	IMR90	Hi-C	24141950	MEIS2	11595	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	38376586	38376698	38376641	Y	NA	NA	SPRED1,FAM98B	IMR90	Hi-C	24141950	SPRED1	165829	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	38422177	38422570	38422209	Y	NA	NA	SPRED1	IMR90	Hi-C	24141950	SPRED1	119957	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	40391032	40391342	40391133	Y	PLCB2,C15orf57,BMF,BMF,BMF	BMF	NA	NA	NA	NA	BMF	7751	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	40669843	40670190	40669979	Y	GPR176,PAK6,DISP2	C15orf52,DISP2,IVD	NA	NA	NA	NA	DISP2	21407	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr15	41219895	41220240	41219942	Y	NA	VPS18,DLL4,CHAC1	NA	NA	NA	NA	DLL4	357	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	41220555	41220912	41220794	Y	NUSAP1,DLL4	VPS18,DLL4,CHAC1	NA	NA	NA	NA	DLL4	1017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	41581854	41582095	41581909	Y	NA	OIP5-AS1,OIP5,NUSAP1	NA	NA	NA	NA	OIP5-AS1	7666	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	41920606	41920652	41920629	Y	NA	MGA	TYRO3,MAPKBP1,MGA	IMR90	Hi-C	24141950	MGA	9184	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	41953918	41954236	41954127	Y	EHD4,MGA	MGA	MAPKBP1	IMR90	Hi-C	24141950	MGA	42496	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr15	42535686	42535733	42535710	Y	NA	VPS39,GANC,TMEM87A	NA	NA	NA	NA	GANC	27698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	42723209	42723609	42723409	Y	NA	NA	NA	NA	NA	NA	SNAP23	57822	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	42814906	42815063	42814960	Y	NA	SNAP23,LRRC57,HAUS2	NA	NA	NA	NA	LRRC57	23937	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	43356735	43357067	43356746	Y	NA	UBR1	NA	NA	NA	NA	UBR1	39244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	43415014	43415563	43415337	Y	NA	UBR1,TMEM62	NA	NA	NA	NA	TMEM62	1537	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	43810666	43810996	43810786	Y	MAP1A	TP53BP1,MAP1A	NA	NA	NA	NA	MAP1A	9510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	44073726	44074107	44073917	Y	NA	PDIA3,CATSPER2P1,SERF2,ELL3,MFAP1,WDR76	NA	NA	NA	NA	ELL3	5985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	44181815	44182145	44181980	Y	NA	NA	NA	NA	NA	NA	WDR76	64654	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	44431053	44431468	44431357	Y	NA	NA	NA	NA	NA	NA	FRMD5	53982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	44592122	44592245	44592183	Y	NA	CASC4	NA	NA	NA	NA	CASC4	13195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	44954800	44955080	44954968	Y	CTDSPL2,TRIM69,PATL2,B2M,SPG11	SPG11,PATL2,B2M	NA	NA	NA	NA	SPG11	924	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	45746745	45747578	45747238	Y	SPATA5L1,C15orf48,SQRDL,PLDN	NA	NA	NA	NA	NA	SPATA5L1	54216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	48011445	48011769	48011637	Y	NA	CTD-2270N23.1	NA	NA	NA	NA	CTD-2270N23.1	9363	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr15	48023492	48023830	48023661	Y	NA	CTD-2270N23.1	NA	NA	NA	NA	CTD-2270N23.1	2360	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	48605520	48605711	48605648	Y	NA	DUT,RP11-154J22.1	NA	NA	NA	NA	DUT	15497	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	48884454	48884907	48884660	Y	NA	NA	NA	NA	NA	NA	FBN1	51139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	48963656	48963859	48963732	Y	FBN1	FBN1	SHC4,FBN1,CEP152	IMR90	Hi-C	24141950	FBN1	27610	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	49598906	49599159	49599033	Y	NA	NA	NA	NA	NA	NA	COPS2	153048	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	50995097	50995499	50995351	Y	SPPL2A	TRPM7	NA	NA	NA	NA	TRPM7	18085	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr15	51172834	51173079	51172965	Y	USP8,TRPM7,SPPL2A	AP4E1	TRPM7,SPPL2A,USP50,ASB18	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,19890323,22265404	AP4E1	25790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	51455036	51455205	51455156	Y	NA	NA	GLDN,TNFAIP8L3,CYP19A1	IMR90	Hi-C	24141950	TNFAIP8L3	59563	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	51872747	51872927	51872852	Y	TMOD3,MAPK6,LYSMD2,DMXL2	DMXL2	NA	NA	NA	NA	DMXL2	40103	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	51909690	51910017	51909879	Y	NA	DMXL2	NA	NA	NA	NA	DMXL2	3013	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	52228372	52228625	52228515	Y	NA	MAPK6,LEO1	NA	NA	NA	NA	MAPK6	13678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	52235970	52236006	52235989	Y	DMXL2,MAPK6	MAPK6,LEO1	NA	NA	NA	NA	MAPK6	6297	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	52349753	52350120	52349937	Y	NA	CTD-2184D3.1	NA	NA	NA	NA	CTD-2184D3.1	35372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	52545063	52545254	52545150	Y	MAPK6	MYO5C	NA	NA	NA	NA	MYO5C	40741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	52797123	52797448	52797286	Y	NA	MYO5A	NA	NA	NA	NA	MYO5A	21799	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	52851602	52851989	52851853	Y	NA	MYO5A,ARPP19	NA	NA	NA	NA	ARPP19	8091	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	54459797	54459817	54459807	Y	UNC13C	NA	NA	NA	NA	NA	WDR72	406722	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	55463152	55463211	55463182	Y	NA	RSL24D1	NA	NA	NA	NA	RSL24D1	24054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	55487267	55487658	55487506	Y	NA	RSL24D1	NA	NA	NA	NA	RSL24D1	2	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	55487983	55488563	55488357	Y	RAB27A,PIGB,RSL24D1	RSL24D1	NA	NA	NA	NA	RSL24D1	718	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	55514866	55515077	55514981	Y	RAB27A,PIGB,CCPG1,CCPG1,RAB27A	RSL24D1	NA	NA	NA	NA	RSL24D1	27601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	55574844	55574949	55574897	Y	NA	PIGB,RAB27A,RP11-139H15.1	NA	NA	NA	NA	PIGB	34209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	55581016	55581448	55581368	Y	RAB27A,PIGB,CCPG1,CCPG1	PIGB,RAB27A,RP11-139H15.1	NA	NA	NA	NA	PIGB	27710	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	55823075	55823485	55823135	Y	PYGO1	DYX1C1-CCPG1,DYX1C1	NA	NA	NA	NA	DYX1C1	24643	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	56162319	56162688	56162565	Y	NA	NA	NA	NA	NA	NA	NEDD4	121256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	56475850	56476168	56476009	Y	MNS1	NA	NA	NA	NA	NA	RFX7	57315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	56513902	56514185	56514176	Y	NA	RFX7,TEX9	NA	NA	NA	NA	RFX7	19298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	56717939	56718122	56718071	Y	RFX7,ZNF280D,MNS1,TEX9	MNS1	NA	NA	NA	NA	MNS1	37213	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	59068062	59068279	59068172	Y	NA	ADAM10,FAM63B	NA	NA	NA	NA	FAM63B	6671	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	59469464	59469853	59469728	Y	ADAM10,RNF111	NA	NA	NA	NA	NA	CCNB2	74187	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	59492312	59492582	59492437	Y	BNIP2,ADAM10,RNF111	NA	NA	NA	NA	NA	CCNB2	97035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	59587320	59587393	59587357	Y	NA	NA	NA	NA	NA	NA	FAM81A	75499	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	60337265	60337365	60337315	Y	NA	FOXB1	NA	NA	NA	NA	FOXB1	42844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	60700608	60701055	60700809	Y	NA	ANXA2	NA	NA	NA	NA	ANXA2	7526	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	60701970	60702307	60702139	Y	NA	ANXA2	NA	NA	NA	NA	ANXA2	8888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	61113423	61113507	61113465	Y	NA	NA	NA	NA	NA	NA	RP11-219B17.1	344046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	61329284	61329972	61329593	Y	NA	NA	NA	NA	NA	NA	RORA	189546	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	61406057	61406438	61406248	Y	NA	NA	NA	NA	NA	NA	RORA	113080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	61505182	61505193	61505186	Y	RORA	RORA	NA	NA	NA	NA	RORA	14325	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	62130295	62130308	62130301	Y	NA	NA	NA	NA	NA	NA	VPS13C	220364	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	62207321	62207567	62207441	Y	NA	NA	NA	NA	NA	NA	VPS13C	143105	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	62411576	62411892	62411783	Y	NA	NA	NA	NA	NA	NA	VPS13C	60904	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	62574155	62574333	62574245	Y	NA	NA	NA	NA	NA	NA	TLN2	106392	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	63803463	63803731	63803481	Y	NA	USP3	NA	NA	NA	NA	USP3	8670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	63871063	63871418	63871089	Y	NA	USP3-AS1	NA	NA	NA	NA	USP3-AS1	20370	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr15	64043759	64043975	64043867	Y	NA	NA	NA	NA	NA	NA	HERC1	80166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64060591	64060833	64060743	Y	USP3,HERC1,DAPK2	NA	NA	NA	NA	NA	HERC1	63308	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64385169	64385477	64385384	Y	NA	DAPK2,FAM96A,SNX1	NA	NA	NA	NA	SNX1	847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64601637	64601745	64601727	Y	NA	CSNK1G1	NA	NA	NA	NA	CSNK1G1	44697	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64722485	64722825	64722650	Y	NA	KIAA0101,TRIP4,ZNF609	NA	NA	NA	NA	ZNF609	28116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64753700	64753985	64753784	Y	PLEKHO2	ZNF609	NA	NA	NA	NA	ZNF609	2759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64991554	64991938	64991797	Y	NA	OAZ2	NA	NA	NA	NA	OAZ2	1542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	64995974	64996331	64996160	Y	NA	OAZ2	NA	NA	NA	NA	OAZ2	2494	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	65127928	65128208	65128016	Y	NA	PIF1,PLEKHO2	PIF1	K562	ChIA-PET	22265404	PLEKHO2	3880	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	65244919	65245418	65244949	Y	ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16,ANKDD1A	ANKDD1A,SPG21	NA	NA	NA	NA	SPG21	35230	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr15	65245420	65245827	65245459	Y	ZNF609,OAZ2,PLEKHO2,PARP16	ANKDD1A,SPG21	NA	NA	NA	NA	SPG21	34821	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr15	65403116	65403434	65403296	Y	ANKDD1A,PDCD7	RASL12,PDCD7	UBAP1L,KBTBD13,OSTBETA,RASL12	IMR90	Hi-C	24141950	PDCD7	20740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	65596266	65596532	65596409	Y	NA	RNU5A-1,PARP16	PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PARP16	5310	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	65596702	65597188	65596889	Y	DENND4A	RNU5A-1,PARP16	PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PARP16	5746	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	65823475	65823857	65823545	Y	IGDCC4	DPP8,PTPLAD1	NA	NA	NA	NA	PTPLAD1	2719	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	65831867	65832220	65831871	Y	NA	DPP8,PTPLAD1	C15orf44	IMR90	Hi-C	24141950	PTPLAD1	11111	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	66060795	66060948	66060877	Y	NA	RAB11A,DENND4A	NA	NA	NA	NA	DENND4A	21683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	66111254	66111589	66111443	Y	DPP8,DPP8,DENND4A	DENND4A	SLC24A1,DENND4A,PTPLAD1,C15orf44,RAB11A,MEGF11	IMR90	Hi-C	24141950	DENND4A	28623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	66162838	66163256	66163114	Y	NA	NA	NA	NA	NA	NA	DENND4A	80207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	66163349	66163534	66163463	Y	NA	NA	NA	NA	NA	NA	DENND4A	80718	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	66662192	66662458	66662267	Y	MAP2K1	TIPIN,MAP2K1	NA	NA	NA	NA	TIPIN	14626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	66707547	66707736	66707571	Y	MAP2K1	TIPIN,MAP2K1	RPL4,SNAPC5	IMR90	Hi-C	24141950	MAP2K1	30392	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	66764584	66765048	66764851	Y	NA	SNAPC5,SNORD18A,ZWILCH,RPL4	NA	NA	NA	NA	SNAPC5	23103	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	66993287	66993569	66993487	Y	MAP2K1,SMAD6	NA	NA	NA	NA	NA	RPL4	178417	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	67359902	67360303	67360058	Y	NA	SMAD3	NA	NA	NA	NA	SMAD3	5801	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	67385827	67386130	67385989	Y	SMAD3	SMAD3	NA	NA	NA	NA	SMAD3	31726	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	67490281	67490446	67490307	Y	SMAD3	NA	NA	NA	NA	NA	IQCH	54692	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	67516633	67516865	67516859	Y	NA	IQCH,AAGAB	NA	NA	NA	NA	IQCH	28273	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	68174845	68175044	68174931	Y	PIAS1,CALML4	NA	PIAS1,CLN6,CALML4,C15orf61,LOC100506686,IQCH,SKOR1	IMR90	Hi-C	24141950	SKOR1	64803	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	68207456	68207574	68207516	Y	NA	NA	CALML4,CLN6,PIAS1,LOC100506686,IQCH	IMR90	Hi-C	24141950	SKOR1	97414	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	68588456	68588855	68588647	Y	ITGA11	CLN6,FEM1B	NA	NA	NA	NA	FEM1B	20315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	68657439	68657730	68657635	Y	NA	NA	NA	NA	NA	NA	ITGA11	64771	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	68853537	68853757	68853647	Y	NA	CORO2B	NA	NA	NA	NA	CORO2B	15551	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	69453904	69454158	69454121	Y	GLCE	GLCE	NA	NA	NA	NA	GLCE	2981	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	69487654	69488051	69487853	Y	NA	GLCE	NA	NA	NA	NA	GLCE	36731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	69490173	69490404	69490203	Y	NA	GLCE	NA	NA	NA	NA	GLCE	39250	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	69724089	69724530	69724231	Y	NA	KIF23,RP11-253M7.1,RPLP1	NA	NA	NA	NA	RPLP1	18593	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	70391261	70391735	70391557	Y	TLE3	TLE3	NA	NA	NA	NA	TLE3	2746	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	70391851	70392235	70392005	Y	TLE3	TLE3	NA	NA	NA	NA	TLE3	3336	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	71144876	71145062	71144944	Y	NA	LRRC49,LARP6,THAP10	NA	NA	NA	NA	LARP6	378	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	72198564	72199008	72198773	Y	PARP6,MYO9A,CELF6,CELF6,CELF6	NA	NA	NA	NA	NA	SENP8	205591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	72337253	72337262	72337258	Y	SENP8,SENP8,SENP8,MYO9A,CELF6,CELF6	NA	NA	NA	NA	NA	SENP8	67337	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	72617371	72617435	72617389	Y	MYO9A,SENP8,PARP6,CELF6,CELF6,CELF6	HEXA	NA	NA	NA	NA	HEXA	49382	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	72832767	72832969	72832868	Y	PKM2,CELF6,CELF6,ADPGK,ARIH1	NA	NA	NA	NA	NA	ARIH1	68100	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	73032689	73032951	73032815	Y	PARP6,CELF6,ARIH1,ADPGK	ADPGK	NA	NA	NA	NA	ADPGK	43236	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	73061587	73061861	73061724	Y	PARP6,CELF6,CELF6,ARIH1,ADPGK	ADPGK	NA	NA	NA	NA	ADPGK	14326	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	73435699	73435965	73435801	Y	NEO1,HCN4	NA	NA	NA	NA	NA	NEO1	93648	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	73488522	73488835	73488645	Y	NA	NA	NA	NA	NA	NA	NEO1	146471	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	74222908	74223263	74222994	Y	LOXL1,STOML1	LOXL1	NA	NA	NA	NA	LOXL1	6578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	74223574	74223817	74223712	Y	LOXL1	LOXL1	NA	NA	NA	NA	LOXL1	7244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	74332904	74333192	74333031	Y	NA	STOML1,PML	NA	NA	NA	NA	PML	47890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	74412993	74413248	74413104	Y	STRA6,CCDC33,C15orf59,TBC1D21	NA	NA	NA	NA	NA	RP11-60L3.1	79798	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75326958	75327212	75327152	Y	SIN3A,SIN3A,MAN2C1,ARID3B,CLK3,CSK,SCAMP2,C15orf39	PPCDC	NA	NA	NA	NA	PPCDC	13062	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75361968	75362271	75362022	Y	SIN3A,SIN3A,MAN2C1,CLK3,CSK,SCAMP2,C15orf39	PPCDC	NA	NA	NA	NA	PPCDC	48072	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75369871	75370272	75370177	Y	SIN3A,SIN3A,CLK3,CSK,C15orf39	NA	C15orf39	IMR90	Hi-C	24141950	PPCDC	55975	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75391144	75391269	75391207	Y	SIN3A,SIN3A,MAN2C1,CLK3,CSK,C15orf39	NA	NA	NA	NA	NA	PPCDC	77248	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75742568	75742962	75742713	Y	NA	SIN3A	NA	NA	NA	NA	SIN3A	3221	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75745296	75745530	75745399	Y	PPCDC,IMP3,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	653	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	75746315	75746749	75746512	Y	PPCDC,C15orf39,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	132	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr15	75747348	75747533	75747407	Y	RPP25,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	76050803	76051078	76050853	Y	NA	CSPG4,DNM1P35	NA	NA	NA	NA	DNM1P35	21839	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	77351977	77352357	77352309	Y	NA	TSPAN3	PSTPIP1	IMR90	Hi-C	24141950	TSPAN3	21969	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	77711297	77711794	77711478	Y	NA	PEAK1,HMG20A	NA	NA	NA	NA	HMG20A	543	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	77739736	77739821	77739778	Y	NA	PEAK1,HMG20A	NA	NA	NA	NA	HMG20A	28982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	78031317	78031646	78031484	Y	LINGO1	NA	NA	NA	NA	NA	LINGO1	79596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	78110975	78112297	78111796	Y	HMG20A,LINGO1,DNAJA4,ACSBG1	NA	NA	NA	NA	NA	LINGO1	0	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr15	78754081	78754185	78754133	Y	ACSBG1	IREB2	NA	NA	NA	NA	IREB2	26308	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	80126746	80127013	80126880	Y	NA	NA	NA	NA	NA	NA	MTHFS	60708	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	80194397	80194544	80194472	Y	ZFAND6,ST20,BCL2A1,ST20-MTHFS	MTHFS,C15ORF37,ST20	NA	NA	NA	NA	MTHFS	6676	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	80211506	80211893	80211588	Y	NA	MTHFS,C15ORF37,ST20	NA	NA	NA	NA	C15ORF37	1614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	81125183	81125474	81125331	Y	NA	NA	NA	NA	NA	NA	KIAA1199	55499	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	81277111	81277444	81277389	Y	STARD5,MESDC1	MESDC2,MESDC1	NA	NA	NA	NA	MESDC2	2775	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	82050341	82050360	82050353	Y	NA	NA	NA	NA	NA	NA	MEX3B	286122	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	82170277	82170527	82170385	Y	NA	NA	EFTUD1	IMR90	Hi-C	24141950	MEX3B	165955	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	82302959	82303245	82303102	Y	NA	MEX3B	NA	NA	NA	NA	MEX3B	33237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	82339167	82339811	82339478	Y	MEX3B	MEX3B	NA	NA	NA	NA	MEX3B	2685	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr15	83329401	83329783	83329629	Y	AP3B2,CPEB1,CPEB1	CPEB1,RP11-752G15.4,AP3B2	NA	NA	NA	NA	CPEB1	13789	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	83376680	83377056	83376874	Y	NA	RP11-752G15.4,AP3B2,RP11-752G15.6	NA	NA	NA	NA	AP3B2	14	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	83683180	83683566	83683373	Y	NA	HOMER2,FAM103A1,C15orf40	NA	NA	NA	NA	C15orf40	4787	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	83731534	83731663	83731576	Y	WHAMM,BTBD1	BTBD1	NA	NA	NA	NA	BTBD1	2443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	83815089	83815145	83815117	Y	NA	NA	NA	NA	NA	NA	HDGFRP3	59625	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	83817881	83818018	83817954	Y	NA	NA	NA	NA	NA	NA	HDGFRP3	56752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	83857531	83857848	83857643	Y	AP3B2,HDGFRP3	HDGFRP3	NA	NA	NA	NA	HDGFRP3	16922	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	83857860	83858021	83857985	Y	NA	HDGFRP3	NA	NA	NA	NA	HDGFRP3	16749	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	83862328	83862648	83862488	Y	NA	HDGFRP3	NA	NA	NA	NA	HDGFRP3	12122	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	83869144	83869263	83869183	Y	NA	HDGFRP3	NA	NA	NA	NA	HDGFRP3	5507	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	85361646	85361991	85361963	Y	ALPK3	NA	NA	NA	NA	NA	ZNF592	71780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	85645018	85645768	85645040	Y	NA	NA	NA	NA	NA	NA	PDE8A	123347	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	86020857	86021180	86020870	Y	KLHL25	NA	NA	NA	NA	NA	AKAP13	99055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	86111518	86111581	86111550	Y	NA	NA	NA	NA	NA	NA	AKAP13	189716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	86321738	86321858	86321816	Y	NA	KLHL25	NA	NA	NA	NA	KLHL25	14403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	86541178	86541560	86541369	Y	NA	NA	NA	NA	NA	NA	KLHL25	204917	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89027924	89028249	89027989	Y	NA	MRPL46,MRPS11	NA	NA	NA	NA	MRPS11	19240	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89149774	89150157	89149841	Y	NA	AEN	NA	NA	NA	NA	AEN	12370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89595180	89595429	89595286	Y	NA	ABHD2	ABHD2,RLBP1,MFGE8,HAPLN3	IMR90	Hi-C	24141950	ABHD2	33261	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89648424	89648609	89648517	Y	NA	ABHD2,HMGB1P8	NA	NA	NA	NA	ABHD2	19734	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89664635	89664981	89664666	Y	NA	ABHD2,HMGB1P8	NA	NA	NA	NA	HMGB1P8	12745	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89795623	89795958	89795791	Y	NA	FANCI	NA	NA	NA	NA	FANCI	10443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	89856537	89857272	89856853	Y	NA	POLG,LINC00925	NA	NA	NA	NA	POLG	18820	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr15	90419728	90419914	90419806	Y	ZNF710,SEMA4B,ANPEP,AP3S2	AP3S2,C15orf38-AP3S2,C15orf38	NA	NA	NA	NA	AP3S2	15660	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	90436374	90436604	90436501	Y	NA	AP3S2,C15orf38-AP3S2,C15orf38	NA	NA	NA	NA	AP3S2	800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	90563245	90563669	90563337	Y	ANPEP,AP3S2,IQGAP1,CIB1,ZNF710	NA	NA	NA	NA	NA	IDH2	80067	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	90578762	90579351	90578884	Y	ANPEP,AP3S2,ZNF710,SEMA4B,IQGAP1	NA	NA	NA	NA	NA	IDH2	64385	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	90605290	90605500	90605324	Y	NA	IDH2	NA	NA	NA	NA	IDH2	38236	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	90958026	90958305	90958134	Y	ZNF710,IQGAP1	IQGAP1	NA	NA	NA	NA	IQGAP1	28576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	91114363	91114916	91114453	Y	UNC45A,FES,FES,FES,CIB1,IQGAP1	CRTC3	NA	NA	NA	NA	CRTC3	43206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	91153046	91153352	91153276	Y	NA	NA	NA	NA	NA	NA	CRTC3	81889	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	91190174	91190180	91190177	Y	NA	NA	NA	NA	NA	NA	RP11-387D10.2	68192	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr15	91208661	91208996	91208948	Y	NA	RP11-387D10.2,BLM	NA	NA	NA	NA	RP11-387D10.2	49376	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	91541068	91541209	91541180	Y	NA	RCCD1,PRC1,VPS33B	NA	NA	NA	NA	PRC1	4209	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	91808048	91808189	91808119	Y	FES,FES	NA	NA	NA	NA	NA	SV2B	166868	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	91847949	91847993	91847971	Y	NA	NA	NA	NA	NA	NA	SV2B	206769	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	93130741	93130751	93130746	Y	NA	NA	NA	NA	NA	NA	RP11-386M24.4	144674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	93354824	93354998	93354897	Y	CHD2	FAM174B	NA	NA	NA	NA	FAM174B	3710	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	93363497	93364154	93363735	Y	ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2	FAM174B	ASB9P1,CHD2,LOC100507217	IMR90	Hi-C	24141950	FAM174B	12383	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr15	93374780	93375598	93375185	Y	NA	FAM174B,CHD2	CHD2,LOC100507217,ASB9P1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM174B	23666	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	93520042	93520437	93520098	Y	CHD2	NA	NA	NA	NA	NA	CHD2	95516	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	93542371	93542660	93542397	Y	NA	NA	NA	NA	NA	NA	CHD2	117845	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr15	93633328	93633692	93633549	Y	RGMA,RGMA,RGMA,RGMA	NA	NA	NA	NA	NA	CHD2	208802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	94746622	94746847	94746732	Y	NA	NA	NA	NA	NA	NA	CHD2	1322096	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	96884042	96884481	96884402	Y	NA	NR2F2,MIR1469	NA	NA	NA	NA	MIR1469	9552	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr15	96884534	96884884	96884709	Y	NA	NR2F2,MIR1469	NA	NA	NA	NA	MIR1469	10044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	96898438	96898666	96898552	Y	NA	NR2F2,MIR1469	NA	NA	NA	NA	MIR1469	23948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	99409255	99409515	99409377	Y	NA	NA	NA	NA	NA	NA	IGF1R	219055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	99856918	99857221	99857070	Y	NA	NA	NA	NA	NA	NA	HSP90B2P	61081	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	101481026	101481320	101481182	Y	LRRK1	LRRK1	NA	NA	NA	NA	LRRK1	23606	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	101733484	101734132	101733815	Y	NA	NA	NA	NA	NA	NA	CHSY1	56005	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	101790495	101790968	101790609	Y	NA	CHSY1,SNRPA1	NA	NA	NA	NA	CHSY1	358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	101834172	101834455	101834316	Y	TM2D3,TARSL2,SNRPA1	CHSY1,SNRPA1	NA	NA	NA	NA	SNRPA1	685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr15	102202329	102202647	102202484	Y	OR4F15	TM2D3	NA	NA	NA	NA	TM2D3	11735	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	374352	374895	374583	Y	RHOT2,NHLRC4,AXIN1,LUC7L	PDIA2,AXIN1,MRPL28	NA	NA	NA	NA	AXIN1	25778	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	729341	729555	729445	Y	NA	C16orf13,FAM195A,AL022341.3,WDR90,RHOT2,STUB1,JMJD8,WDR24,FBXL16,METRN,FAM173A	NA	NA	NA	NA	STUB1	1117	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr16	1979729	1980160	1979842	Y	TSC2,MLST8,DNASE1L2,C16orf79,ABCA3,CCDC154,NME3,NUBP2,TBL3,RNF151	NDUFB10,SNORA64,RPS2,SNHG9,TBL3	NUBP2,FAHD1,IGFALS,C16orf73,HS3ST6,MAPK8IP3,SPSB3,EME2,NME3,MRPS34,HAGH,LINC00254	IMR90	Hi-C	24141950	NDUFB10	27349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	2057211	2057401	2057386	Y	NA	NDUFB10,SNORA64,RPS2,SNHG9,TBL3,GFER,SYNGR3,ZNF598,NPW,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	ZNF598	423	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	2057818	2059084	2058234	Y	TRAF7,ECI1,HN1L,EME2,ZNF598	SNORA64,RPS2,SNHG9,TBL3,GFER,SYNGR3,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	ZNF598,NPW	0	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr16	2175102	2175363	2175212	Y	NME3,NUBP2,TBL3,GFER,SLC9A3R2,MLST8,MLST8,DNASE1L2,NTHL1,TSC2	RAB26,SNORD60,TRAF7	NA	NA	NA	NA	RAB26	13441	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	2478608	2478672	2478640	Y	RPS2,RNF151,TBL3,GFER,NTHL1,TSC2,TRAF7,MLST8,MLST8,DNASE1L2,ECI1,TCEB2,FLYWCH2	CCNF,C16orf59,NTN3,TBC1D24	NA	NA	NA	NA	CCNF	1213	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	2518541	2518691	2518640	Y	RAB26,E4F1,CCNF,C16orf59,TBC1D24,NTN3	CCNF,C16orf59,NTN3,TBC1D24,ATP6V0C,AMDHD2	NA	NA	NA	NA	NTN3	809	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	2518760	2519270	2519088	Y	RAB26,E4F1,SRRM2,C16orf59,TBC1D24,NTN3	CCNF,C16orf59,NTN3,TBC1D24,ATP6V0C,AMDHD2	NA	NA	NA	NA	NTN3	230	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	2743231	2743530	2743363	Y	NA	ERVK13-1,KCTD5	NA	NA	NA	NA	KCTD5	12755	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr16	2917931	2918273	2918246	Y	NA	FLYWCH2,FLYWCH1	PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	FLYWCH2	12914	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	3053798	3054225	3053960	Y	NA	KREMEN2,PAQR4,PKMYT1,TNFRSF12A,THOC6,HCFC1R1,MMP25	NA	NA	NA	NA	TNFRSF12A	12221	CAGE	JHUCS-1	hg19	FANTOM5	2.66629154255759
chr16	3156056	3156304	3156227	Y	PAQR4,OR2C1,CLUAP1,OR1F1	IL32,ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	4257	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	3156518	3156937	3156694	Y	PAQR4,CLUAP1,ZNF205	IL32,ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	3624	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr16	3200393	3200919	3200597	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	22615	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	3285972	3286117	3286070	Y	PRSS22,ZSCAN10,ZNF200,ZNF200,ZNF200,ZNF75A,ZNF263	ZNF200,ZNF263	NA	NA	NA	NA	ZNF200	1751	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	3730332	3730635	3730484	Y	NA	TRAP1	NA	NA	NA	NA	TRAP1	34963	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	3858926	3859164	3859045	Y	NA	NA	NA	NA	NA	NA	CREBBP	69563	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	3908512	3908774	3908643	Y	NA	CREBBP	NA	NA	NA	NA	CREBBP	19953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	4233647	4234082	4234013	Y	NA	NA	NA	NA	NA	NA	SRL	55999	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr16	4262475	4262771	4262673	Y	SRL	SRL	NA	NA	NA	NA	SRL	27310	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	4321625	4322178	4321908	Y	ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4	SRL,TFAP4	NA	NA	NA	NA	TFAP4	549	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr16	4357393	4358110	4357824	Y	CORO7	TFAP4,PAM16	ADCY9,CREBBP,TFAP4,LOC100507501,VASN,CORO7-PAM16	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TFAP4	36317	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	4427155	4427449	4427262	Y	NA	PAM16,VASN,CORO7,DNAJA3	NA	NA	NA	NA	VASN	7306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	4582537	4582680	4582608	Y	NA	NMRAL1	HMOX2,NMRAL1	IMR90	Hi-C	24141950	NMRAL1	38773	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	4666118	4666710	4666381	Y	NA	MGRN1	NA	NA	NA	NA	MGRN1	1624	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr16	4818680	4818913	4818758	Y	C16orf5,C16orf5,SEC14L5,ROGDI	C16orf71,ANKS3,ZNF500,ROGDI	NA	NA	NA	NA	ZNF500	3055	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	6353433	6353832	6353638	Y	NA	NA	NA	NA	NA	NA	RBFOX1	286338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	6705372	6705494	6705481	Y	RBFOX1	NA	NA	NA	NA	NA	RBFOX1	638277	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	6822644	6823191	6822880	Y	RBFOX1	NA	NA	NA	NA	NA	RBFOX1	755549	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	7354527	7355049	7354969	Y	NA	NA	NA	NA	NA	NA	RBFOX1	1287432	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr16	7380911	7381241	7380947	Y	RBFOX1	NA	NA	NA	NA	NA	RBFOX1	1313816	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	7473619	7473766	7473686	Y	NA	NA	NA	NA	NA	NA	METTL22	1239774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	7588842	7589120	7588981	Y	NA	NA	NA	NA	NA	NA	METTL22	1124420	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	7700164	7700333	7700250	Y	NA	NA	NA	NA	NA	NA	METTL22	1013207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	7725716	7726034	7725879	Y	NA	NA	NA	NA	NA	NA	METTL22	987506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	8248200	8248245	8248223	Y	NA	NA	NA	NA	NA	NA	METTL22	465295	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	8939360	8939674	8939516	Y	USP7	TMEM186,CARHSP1	NA	NA	NA	NA	CARHSP1	21192	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	9208363	9208890	9208559	Y	NA	C16orf72	NA	NA	NA	NA	C16orf72	24858	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	9583805	9584097	9583876	Y	NA	NA	GRIN2A	IMR90	Hi-C	24141950	C16orf72	400300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	9874200	9874550	9874338	Y	NA	NA	NA	NA	NA	NA	GRIN2A	400061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	9912515	9912659	9912587	Y	GRIN2A,GRIN2A,GRIN2A	NA	NA	NA	NA	NA	GRIN2A	361952	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	10125381	10125508	10125448	Y	NA	NA	NA	NA	NA	NA	GRIN2A	149103	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	10133348	10133947	10133667	Y	NA	NA	NA	NA	NA	NA	GRIN2A	140664	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr16	10226194	10226597	10226397	Y	GRIN2A,GRIN2A,GRIN2A	GRIN2A	NA	NA	NA	NA	GRIN2A	48014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	10229408	10229772	10229590	Y	NA	GRIN2A	NA	NA	NA	NA	GRIN2A	44839	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	10563450	10564010	10563797	Y	NA	NA	NA	NA	NA	NA	EMP2	108545	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	10672618	10672930	10672712	Y	NA	EMP2	NA	NA	NA	NA	EMP2	63	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	10677230	10677389	10677317	Y	NA	EMP2	NA	NA	NA	NA	EMP2	4675	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	11012685	11013009	11012730	Y	TEKT5,FAM18A,CIITA,CLEC16A	DEXI,CLEC16A	NA	NA	NA	NA	DEXI	21308	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	11890330	11890418	11890367	Y	LITAF,LITAF,SNN,RUNDC2A,TXNDC11,ZC3H7A	ZC3H7A	NA	NA	NA	NA	ZC3H7A	1207	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr16	11955170	11955449	11955310	Y	NA	RSL1D1	ZC3H7A,RSL1D1,BCAR4	IMR90	Hi-C	24141950	RSL1D1	11728	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	11960558	11960748	11960653	Y	NA	RSL1D1,GSPT1	ZC3H7A,RSL1D1,BCAR4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RSL1D1	17116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	11968147	11968344	11968329	Y	ZC3H7A	RSL1D1,GSPT1	RSL1D1	IMR90	Hi-C	24141950	RSL1D1	24705	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	12008398	12008797	12008598	Y	NA	GSPT1	NA	NA	NA	NA	GSPT1	459	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	12049208	12049600	12049404	Y	NA	GSPT1,RP11-166B2.1,SNX29	SNX29	IMR90	Hi-C	24141950	RP11-166B2.1	18900	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	12790773	12790823	12790798	Y	NA	NA	NA	NA	NA	NA	CPPED1	105051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	12861809	12861981	12861895	Y	NA	CPPED1	NA	NA	NA	NA	CPPED1	33893	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	13873618	13873819	13873731	Y	NA	NA	NA	NA	NA	NA	ERCC4	138195	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr16	14050567	14050869	14050623	Y	MKL2	ERCC4,RPS26P52	NA	NA	NA	NA	RPS26P52	36031	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	14326449	14326637	14326520	Y	MKL2	NA	NA	NA	NA	NA	MKL2	163271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	14379572	14379808	14379698	Y	NA	NA	NA	NA	NA	NA	MKL2	216394	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	14395683	14396371	14395873	Y	MKL2	NA	NA	NA	NA	NA	MKL2	232505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	14402100	14402342	14402181	Y	NA	NA	NA	NA	NA	NA	MKL2	238922	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	15238136	15238371	15238252	Y	NA	PKD1P6	NA	NA	NA	NA	PKD1P6	8050	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	15498743	15498890	15498817	Y	NA	C16orf45	NA	NA	NA	NA	C16orf45	27262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	15576237	15576428	15576343	Y	NA	NA	NA	NA	NA	NA	C16orf45	50085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	15583408	15583655	15583541	Y	NDE1,C16orf45	NA	KIAA0430	IMR90	Hi-C	24141950	C16orf45	57256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	15769690	15769796	15769712	Y	NA	KIAA0430,NDE1	NA	NA	NA	NA	NDE1	34566	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	15801967	15802265	15802154	Y	NA	NA	NA	NA	NA	NA	NDE1	66843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	16214258	16214439	16214353	Y	ABCC1	NA	ABCC6	IMR90	Hi-C	24141950	NOMO3	109913	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	17257893	17258025	17257960	Y	XYLT1	NA	NA	NA	NA	NA	XYLT1	304713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	17300719	17300857	17300795	Y	NA	NA	NA	NA	NA	NA	XYLT1	261881	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	17341896	17342078	17341982	Y	XYLT1	NA	NA	NA	NA	NA	XYLT1	220660	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	17411483	17411608	17411498	Y	NA	NA	NA	NA	NA	NA	XYLT1	151130	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	17494575	17494921	17494771	Y	NA	NA	NA	NA	NA	NA	XYLT1	67817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	17545858	17546183	17546022	Y	NA	XYLT1	NA	NA	NA	NA	XYLT1	16555	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	18153312	18153685	18153560	Y	NA	NA	NA	NA	NA	NA	XYLT1	590574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	18811720	18812078	18811899	Y	SMG1,COQ7,COQ7	RPS15A,ARL6IP1	NA	NA	NA	NA	ARL6IP1	720	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	19221625	19221975	19221736	Y	SMG1,COQ7	SYT17	NA	NA	NA	NA	SYT17	44332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	19707699	19708034	19707815	Y	NA	IQCK	NA	NA	NA	NA	IQCK	17744	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	20877631	20877934	20877768	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	LYRM1	31256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	20910017	20910139	20910077	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	20910424	20910792	20910538	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	718	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	21313038	21313456	21313158	Y	NA	CRYM-AS1	NA	NA	NA	NA	CRYM-AS1	2868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	21637887	21638686	21638408	Y	CRYM,METTL9,IGSF6	METTL9	NA	NA	NA	NA	METTL9	31348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	21662273	21662581	21662427	Y	CRYM,METTL9,IGSF6	NA	NA	NA	NA	NA	METTL9	55734	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	22020044	22020453	22020259	Y	OTOA,VWA3A	C16orf52	VWA3A	IMR90	Hi-C	24141950	C16orf52	3085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	22202596	22202946	22202679	Y	POLR3E,CDR2	EEF2K	UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	12657	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr16	22207042	22207397	22207176	Y	NA	EEF2K	POLR3E,EEF2K,C16orf52	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	8206	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	22421466	22421891	22421890	Y	NA	CDR2,RRN3P3	NA	NA	NA	NA	CDR2	24595	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	23431856	23432257	23432204	Y	USP31,COG7	COG7	SCNN1B	IMR90	Hi-C	24141950	COG7	30244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	23473263	23473545	23473445	Y	SCNN1G,GGA2	COG7	NA	NA	NA	NA	COG7	10762	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	23693851	23693869	23693860	Y	NA	PALB2,DCTN5,PLK1	NA	NA	NA	NA	PLK1	6874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	24679861	24680253	24680057	Y	NA	NA	TNRC6A,ARHGAP17,SLC5A11,RBBP6	IMR90	Hi-C	24141950	TNRC6A	58763	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	25025498	25025977	25025718	Y	NA	ARHGAP17	NA	NA	NA	NA	ARHGAP17	511	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	27149778	27150235	27150058	Y	NA	NA	HS3ST4,ZKSCAN2,AQP8	IMR90	Hi-C	24141950	NSMCE1	127880	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	27228652	27228785	27228726	Y	NA	NSMCE1	NA	NA	NA	NA	NSMCE1	49330	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	27421651	27422200	27421657	Y	JMJD5,JMJD5,IL21R	NA	NA	NA	NA	NA	IL4R	98662	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	27533512	27533805	27533694	Y	JMJD5,JMJD5,IL21R,KIAA0556,GTF3C1	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	25429	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	27546889	27546978	27546937	Y	NA	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	12256	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	27620703	27620731	27620720	Y	NA	NA	NA	NA	NA	NA	KIAA0556	61249	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	28108728	28108802	28108745	Y	APOBR,XPO6	NA	NA	NA	NA	NA	XPO6	112439	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	28839972	28840187	28840086	Y	CCDC101,LAT,LAT,SH2B1,SH2B1,SH2B1,NFATC2IP	ATXN2L,TUFM,SH2B1	NA	NA	NA	NA	ATXN2L	7616	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	30645556	30645885	30645776	Y	CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14	ZNF689,PRR14,FBRS	PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF689	12223	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr16	30726552	30726958	30726731	Y	ZNF668,ZNF646,STX4,MYST1,FUS	SRCAP,PHKG2,RNF40,C16orf93	RNF40,PHKG2,C16orf93	IMR90	Hi-C	24141950	SRCAP	19022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	30825606	30826012	30825883	Y	NA	ZNF629	ZNF629,RNF40,MIR4519	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF629	29083	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	30885980	30886229	30886174	Y	ZNF689,PHKG2,RNF40,C16orf93,ZNF668	MIR4519,BCL7C,FBXL19,FBXL19-AS1	NA	NA	NA	NA	MIR4519	1336	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	30994228	30994553	30994360	Y	VKORC1,HSD3B7	ORAI3,SETD1A,STX1B,STX4	NA	NA	NA	NA	HSD3B7	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	31129616	31130225	31129940	Y	ARMC5,STX4,PYCARD,ITGAX,ITGAM,ZNF668,ZNF668,ZNF646,MYST1,FUS	ZNF646,PRSS53,VKORC1,BCKDK,KAT8	NA	NA	NA	NA	KAT8	4541	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	31887367	31887596	31887374	Y	NA	ZNF267	NA	NA	NA	NA	ZNF267	4288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	31891820	31892363	31891972	Y	ARMC5,ZNF267	ZNF267	NA	NA	NA	NA	ZNF267	8741	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	33948799	33949141	33948910	Y	NA	NA	NA	NA	NA	NA	ZNF267	2065720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	33971109	33971442	33971126	Y	NA	NA	NA	NA	NA	NA	ZNF267	2088030	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	46406585	46406940	46406771	Y	NA	NA	NA	NA	NA	NA	SHCBP1	246598	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	46839113	46839505	46839309	Y	NA	C16orf87	NA	NA	NA	NA	C16orf87	23818	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	47281592	47281819	47281707	Y	NA	NA	NA	NA	NA	NA	NETO2	105684	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	48091187	48091368	48091328	Y	ABCC11	NA	NA	NA	NA	NA	LONP2	184839	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	48373783	48374217	48374017	Y	LONP2,N4BP1,SIAH1	NA	NA	NA	NA	NA	LONP2	97576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	48400459	48400723	48400564	Y	LONP2,N4BP1,SIAH1	NA	NA	NA	NA	NA	SIAH1	79590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	48417730	48418013	48418003	Y	N4BP1,SIAH1,SIAH1	NA	NA	NA	NA	NA	SIAH1	62300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	48592202	48592453	48592359	Y	SIAH1,N4BP1	NA	NA	NA	NA	NA	N4BP1	59606	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	48631315	48631363	48631339	Y	NA	N4BP1	NA	NA	NA	NA	N4BP1	20696	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	49316261	49316466	49316357	Y	CBLN1,C16orf78	CBLN1	NA	NA	NA	NA	CBLN1	2519	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr16	49317625	49318405	49317904	Y	NA	CBLN1	NA	NA	NA	NA	CBLN1	3883	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	50101332	50101352	50101341	Y	NA	HEATR3	NA	NA	NA	NA	HEATR3	3480	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	50287533	50287795	50287656	Y	NA	ADCY7	NA	NA	NA	NA	ADCY7	9485	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	50376082	50376389	50376371	Y	NA	BRD7	NA	NA	NA	NA	BRD7	24456	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	53077641	53077824	53077723	Y	NA	CHD9	CHD9	IMR90	Hi-C	24141950	CHD9	9121	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	53124874	53125001	53124924	Y	NA	CHD9	NA	NA	NA	NA	CHD9	37929	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	53125869	53126178	53125948	Y	NA	CHD9	NA	NA	NA	NA	CHD9	38924	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	53165497	53165808	53165602	Y	NA	NA	NA	NA	NA	NA	CHD9	78552	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	53517834	53518098	53518006	Y	NA	AKTIP	NA	NA	NA	NA	AKTIP	18225	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	54128589	54128847	54128718	Y	NA	NA	NA	NA	NA	NA	IRX3	189828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	54961070	54961275	54961203	Y	NA	IRX5	NA	NA	NA	NA	CRNDE	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	56150311	56150358	56150336	Y	SLC6A2,MT4	NA	NA	NA	NA	NA	GNAO1	72944	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	56246770	56247072	56246869	Y	NA	GNAO1	NA	NA	NA	NA	GNAO1	23468	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	56314617	56314966	56314752	Y	MT3,MT1M,GNAO1,BBS2	NA	NA	NA	NA	NA	GNAO1	91315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	56458239	56458402	56458321	Y	NA	AMFR,OGFOD1,NUDT21	NA	NA	NA	NA	AMFR	789	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	57717053	57717380	57717096	Y	FAM192A,ZNF319,GPR97	CCDC135	NA	NA	NA	NA	CCDC135	9325	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	58160772	58161211	58161024	Y	C16orf80	C16orf80	NA	NA	NA	NA	C16orf80	143	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	58455011	58455230	58455100	Y	NA	NDRG4	NA	NA	NA	NA	NDRG4	39520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	58555953	58556233	58556187	Y	NA	SETD6	NA	NA	NA	NA	SETD6	8570	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	62889367	62889697	62889532	Y	NA	NA	NA	NA	NA	NA	CDH11	2268318	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	64096970	64097246	64097108	Y	NA	NA	NA	NA	NA	NA	CDH11	1060769	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	64944348	64944657	64944578	Y	NA	NA	NA	NA	NA	NA	CDH11	213358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	66587187	66587393	66587288	Y	NA	TK2,CKLF,CKLF-CMTM1,CMTM1,CMTM3	NA	NA	NA	NA	CKLF-CMTM1	2697	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr16	66784501	66784840	66784671	Y	NA	DYNC1LI2	NA	NA	NA	NA	DYNC1LI2	800	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	66906996	66907469	66907329	Y	SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2	NAE1,PDP2	NA	NA	NA	NA	NAE1	1837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	66960903	66961306	66961106	Y	PLEKHG4,FHOD1,CBFB,RRAD	RRAD,FAM96B,CES2,CES3	NA	NA	NA	NA	RRAD	3356	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	66962213	66962449	66962329	Y	PLEKHG4,FHOD1,CBFB,RRAD	RRAD,FAM96B,CES2,CES3	NA	NA	NA	NA	FAM96B	3877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	67011641	67011860	67011695	Y	NA	FAM96B,CES2,CES3,CES4A,CBFB	NA	NA	NA	NA	CES4A	8632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	67047765	67048035	67047886	Y	FBXL8,CES4A	CES4A,CBFB	NA	NA	NA	NA	CBFB	12984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	67250789	67251131	67250954	Y	NA	NOL3,KIAA0895L,E2F4,LRRC29,TMEM208,SLC9A5,FHOD1	NA	NA	NA	NA	LRRC29	7820	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	67597304	67597932	67597899	Y	THAP11,RLTPR,ACD	FAM65A,CTCF	NA	NA	NA	NA	CTCF	2994	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr16	67687517	67687714	67687560	Y	HSF4,KIAA0895L,SLC9A5,TSNAXIP1,PARD6A	RLTPR,ACD,PARD6A	NA	NA	NA	NA	ACD	4999	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	67891676	67892114	67891889	Y	RLTPR,ACD,PSMB10,NFATC3,EDC4,THAP11	THAP11,NUTF2,CENPT,EDC4,NRN1L,PSKH1	NA	NA	NA	NA	CENPT	11962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	68271348	68271876	68271591	Y	TSNAXIP1,SLC12A4,ESRP2	PLA2G15,SLC7A6	NA	NA	NA	NA	PLA2G15	5331	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	69060339	69060481	69060445	Y	NA	NA	NA	NA	NA	NA	HAS3	76986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	69225511	69225823	69225667	Y	HAS3	SNTB2	NA	NA	NA	NA	SNTB2	6479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	69345968	69346332	69346034	Y	NA	VPS4A,PDF,NIP7,COG8	NA	NA	NA	NA	VPS4A	2709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	69601109	69601332	69601245	Y	WWP2	NFAT5	NA	NA	NA	NA	NFAT5	4112	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	69790577	69791500	69790768	Y	PDF,NIP7,NOB1	NQO1,NOB1,WWP2	NA	NA	NA	NA	WWP2	2709	CAGE	JHUCS-1	hg19	FANTOM5	2.66629154255759
chr16	69819174	69819469	69819322	Y	NA	NOB1,WWP2	NA	NA	NA	NA	WWP2	24965	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	69865358	69865753	69865556	Y	NA	NA	NA	NA	NA	NA	WWP2	71149	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	70424558	70424975	70424714	Y	NA	DDX19A,ST3GAL2	NA	NA	NA	NA	DDX19A	45826	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	70444676	70444732	70444694	Y	NA	ST3GAL2,FUK	NA	NA	NA	NA	ST3GAL2	26408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	70470997	70471281	70471214	Y	NA	FUK	NA	NA	NA	NA	ST3GAL2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	70564094	70564236	70564165	Y	NA	COG4,SF3B3,SNORD111B	NA	NA	NA	NA	SNORD111B	2682	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	70725776	70726100	70725941	Y	MTSS1L	MTSS1L	MTSS1L	MCF7	ChIA-PET	22265404	MTSS1L	7807	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	70749058	70749400	70749223	Y	NA	MTSS1L	MTSS1L,IL34	IMR90	Hi-C	24141950	MTSS1L	31089	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	70759138	70759547	70759396	Y	MTSS1L	MTSS1L	MTSS1L,IL34	IMR90	Hi-C	24141950	MTSS1L	41169	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	70769740	70769941	70769843	Y	NA	NA	MTSS1L,IL34	IMR90	Hi-C	24141950	MTSS1L	51771	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	71056781	71057070	71056926	Y	NA	NA	NA	NA	NA	NA	HYDIN	205555	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	71398402	71398709	71398522	Y	NA	CALB2	NA	NA	NA	NA	CALB2	7786	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	71828659	71828769	71828714	Y	NA	AP1G1,ATXN1L,IST1	NA	NA	NA	NA	AP1G1	12335	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	72459158	72459630	72459377	Y	NA	NA	NA	NA	NA	NA	TXNL4B	332828	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr16	72882732	72883050	72882991	Y	NA	NA	NA	NA	NA	NA	ZFHX3	208547	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	72972740	72973001	72972925	Y	NA	NA	NA	NA	NA	NA	ZFHX3	118596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	73084736	73084892	73084798	Y	NA	ZFHX3	NA	NA	NA	NA	ZFHX3	6705	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	73088640	73089206	73088991	Y	NA	ZFHX3	NA	NA	NA	NA	ZFHX3	2391	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	73185769	73185903	73185836	Y	NA	NA	ZFHX3,LOC100506172	IMR90	Hi-C	24141950	ZFHX3	94172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	73206454	73206866	73206668	Y	NA	NA	ZFHX3,HPR	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZFHX3	114857	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	74353064	74353398	74353241	Y	FA2H	PSMD7,RP11-252A24.2	NA	NA	NA	NA	PSMD7	24391	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr16	74356396	74356719	74356558	Y	NA	PSMD7,RP11-252A24.2	NA	NA	NA	NA	PSMD7	27723	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	74672577	74672957	74672890	Y	NA	GLG1,RFWD3	NA	NA	NA	NA	RFWD3	25822	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	74701397	74701877	74701440	Y	RFWD3	RFWD3	NA	NA	NA	NA	RFWD3	2618	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	75031065	75031181	75031127	Y	NA	ZNRF1,WDR59	NA	NA	NA	NA	ZNRF1	137	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75034413	75034614	75034514	Y	FA2H,ZFP1,BCAR1,BCAR1,ZNRF1	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	2342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75045854	75046060	75045918	Y	TMEM170A,MLKL	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	13783	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75101005	75101352	75101179	Y	NA	NA	NA	NA	NA	NA	WDR59	68934	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75294692	75295061	75294835	Y	TERF2IP,BCAR1,BCAR1	BCAR1	NA	NA	NA	NA	BCAR1	4890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75454988	75455069	75455029	Y	NA	CFDP1,TMEM170A	NA	NA	NA	NA	CFDP1	10314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75618166	75618518	75618190	Y	NA	TMEM231,GABARAPL2,ADAT1	NA	NA	NA	NA	GABARAPL2	19917	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75628076	75628219	75628207	Y	NA	TMEM231,GABARAPL2,ADAT1	NA	NA	NA	NA	ADAT1	26979	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	75636745	75636762	75636754	Y	NA	TMEM231,GABARAPL2,ADAT1,TERF2IP,KARS	NA	NA	NA	NA	ADAT1	18436	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	75683626	75683906	75683817	Y	NA	ADAT1,TERF2IP,KARS	NA	NA	NA	NA	KARS	3085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	78309369	78309676	78309602	Y	NA	NA	NA	NA	NA	NA	WWOX	178059	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	78876925	78876962	78876944	Y	NA	NA	NA	NA	NA	NA	WWOX	745615	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	79534628	79534642	79534635	Y	NA	NA	WWOX	IMR90	Hi-C	24141950	MAF	97969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	79662561	79662744	79662653	Y	NA	MAF	WWOX	IMR90	Hi-C	24141950	MAF	29950	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	80971971	80972227	80972105	Y	CENPN	NA	NA	NA	NA	NA	CENPN	65876	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	81038389	81038511	81038494	Y	NA	CENPN,ATMIN	NA	NA	NA	NA	CENPN	286	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	81659842	81660553	81660320	Y	NA	NA	NA	NA	NA	NA	PLCG2	110149	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	81871176	81871311	81871248	Y	NA	NA	NA	NA	NA	NA	PLCG2	100474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	83953538	83953937	83953606	Y	NA	MLYCD,OSGIN1,NECAB2	NA	NA	NA	NA	MLYCD	22807	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	84130238	84130438	84130330	Y	NA	MBTPS1,HSDL1	NA	NA	NA	NA	MBTPS1	18073	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	84208911	84209121	84208992	Y	OSGIN1,COTL1,HSDL1,TAF1C	HSDL1,TAF1C	NA	NA	NA	NA	TAF1C	9548	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	84329773	84330037	84329933	Y	NA	WFDC1	NA	NA	NA	NA	WFDC1	3521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	84682643	84682972	84682859	Y	NA	COTL1,KLHL36,USP10	NA	NA	NA	NA	KLHL36	2512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	84785578	84785829	84785712	Y	KIAA0513,COTL1	NA	CRISPLD2,ZDHHC7	IMR90	Hi-C	24141950	USP10	53994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85202555	85203049	85202710	Y	NA	NA	NA	NA	NA	NA	KIAA0513	143180	CAGE	JHUCS-1	hg19	FANTOM5	10.4985229488205
chr16	85264175	85264500	85264259	Y	NA	NA	LOC400548,FAM92B	IMR90	Hi-C	24141950	KIAA0513	204800	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr16	85346294	85346686	85346622	Y	FAM92B	NA	KIAA0513,FAM92B,LOC400548,LINC00311,LOC727710,KIAA0182,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	KIAA0513	286919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85397523	85397640	85397583	Y	NA	NA	LOC727710,LOC400548,KIAA0182,GINS2,FAM92B,LINC00311	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	324039	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85450092	85450367	85450166	Y	NA	NA	LOC727710,GINS2,KIAA0182,FAM92B,LOC400548,C16orf74	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	271312	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85470615	85470779	85470696	Y	NA	NA	KIAA0182,LOC400548,FAM92B,LINC00311,LOC727710,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	250900	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85471045	85471389	85471119	Y	NA	NA	KIAA0182,LOC400548,FAM92B,LINC00311,LOC727710,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	250290	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	85557334	85557622	85557547	Y	NA	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	164057	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	85586399	85586765	85586561	Y	KIAA0182,KIAA0182,GINS2	NA	LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	134914	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85604470	85605423	85604746	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	116256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85606114	85606473	85606294	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	115206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85608106	85608214	85608158	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	113465	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85617282	85617663	85617577	Y	NA	NA	LOC727710,LOC400548,LINC00311,KIAA0182,C16orf74	IMR90	Hi-C	24141950	GINS2	104016	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	85650361	85650613	85650432	Y	NA	NA	NA	NA	NA	NA	GINS2	71066	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87158204	87158531	87158278	Y	NA	NA	FOXC2,FLJ30679,MTHFSD,FOXL1,C16orf95	IMR90	Hi-C	24141950	MAP1LC3B	257070	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87773499	87773902	87773849	Y	NA	KLHDC4	NA	NA	NA	NA	KLHDC4	23696	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87781357	87781475	87781397	Y	C16orf95	KLHDC4	NA	NA	NA	NA	KLHDC4	16123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87811234	87811383	87811309	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	13636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87811524	87811882	87811665	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	13926	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87812654	87813065	87812978	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	15056	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	87886258	87886670	87886593	Y	MAP1LC3B,ZCCHC14,BANP,BANP,BANP	SLC7A5	NA	NA	NA	NA	SLC7A5	14424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87980577	87980839	87980700	Y	NA	BANP	CA5A	MCF7,K562	ChIA-PET	22265404	BANP	11	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	87986927	87987379	87987279	Y	ZCCHC14,SLC7A5,BANP,BANP	BANP	NA	NA	NA	NA	BANP	6077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	88771579	88772211	88771675	Y	ACSF3,ZFPM1,ZC3H18,CYBA,GALNS,CBFA2T3,SNAI3,RNF166,RNF166,RNF166	MVD,RNF166,CTU2	NA	NA	NA	NA	CTU2	708	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	88835950	88836275	88836191	Y	NA	PIEZO1,CDT1,APRT	RNF166,CTU2	K562	ChIA-PET	22265404	PIEZO1	13344	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	89313669	89314138	89313993	Y	ZNF276,ZNF778	ZNF778	NA	NA	NA	NA	ZNF778	31551	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr16	89474257	89474602	89474526	Y	NA	NA	NA	NA	NA	NA	ANKRD11	80367	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	89488709	89489334	89489046	Y	ZNF276,TCF25,SPATA2L,C16orf7,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	65635	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	89555521	89555997	89555713	Y	ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,C16orf7,ANKRD11	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	196	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr16	89571786	89572109	89572034	Y	ACSF3,ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,ANKRD11	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	16461	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	89579992	89580270	89580045	Y	ACSF3,ZNF778,DBNDD1,ZNF276,SPG7	ANKRD11,SPG7,RPL13,SNORD68	NA	NA	NA	NA	SPG7	24667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	89992380	89992810	89992683	Y	NA	MC1R,TUBB3,DEF8,CENPBD1,AFG3L1P	NA	NA	NA	NA	TUBB3	6580	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr16	90024486	90024764	90024610	Y	NA	MC1R,TUBB3,DEF8,CENPBD1,AFG3L1P	NA	NA	NA	NA	DEF8	12153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr16	90143699	90144065	90143926	Y	C16orf55,SPATA2L,ZNF276,C16orf7,ZNF276,TCF25	NA	LOC100130015,GAS8	MCF7	ChIA-PET	22265404	DBNDD1	59163	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	406273	406490	406380	Y	C17orf97,RNMTL1	NA	NA	NA	NA	NA	C17orf97	148155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	424170	424290	424251	Y	FAM101B,VPS53	NA	NA	NA	NA	NA	RPS4XP17	134497	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	438529	438886	438717	Y	NA	NA	NA	NA	NA	NA	RPS4XP17	119901	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	508147	508415	508281	Y	NA	NA	NA	NA	NA	NA	RPS4XP17	50372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	518432	518691	518584	Y	NA	RPS4XP17	NA	NA	NA	NA	RPS4XP17	40096	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	576455	576740	576580	Y	NA	RPS4XP17,VPS53	NA	NA	NA	NA	RPS4XP17	17668	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	654300	654699	654470	Y	NA	VPS53,FAM57A,DBIL5P,GEMIN4,RNMTL1,GLOD4	NA	NA	NA	NA	DBIL5P	400	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	693293	693510	693390	Y	RNMTL1	DBIL5P,GEMIN4,RNMTL1,GLOD4	NA	NA	NA	NA	GLOD4	9712	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	851603	851932	851829	Y	NA	NXN,TIMM22	NA	NA	NA	NA	NXN	29078	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	881812	881896	881869	Y	NA	NXN,TIMM22	NA	NA	NA	NA	NXN	802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	990722	991295	990801	Y	NA	NA	NA	NA	NA	NA	TIMM22	92365	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	1171565	1171808	1171610	Y	WDR81,PITPNA,ABR,ABR	ABR	NA	NA	NA	NA	ABR	41250	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	1358484	1358816	1358590	Y	NA	CRK,MYO1C	NA	NA	NA	NA	CRK	5640	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	1391218	1391783	1391434	Y	NA	CRK,MYO1C,INPP5K,PITPNA-AS1	NA	NA	NA	NA	MYO1C	2323	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	1533068	1533815	1533453	Y	CRK,INPP5K,WDR81,WDR81,WDR81,PITPNA,SLC43A2,SCARF1	SLC43A2	NA	NA	NA	NA	SLC43A2	2888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	1864830	1864896	1864863	Y	NA	NA	NA	NA	NA	NA	RTN4RL1	61743	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	1953067	1954207	1953327	Y	TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1	RTN4RL1,DPH1,OVCA2,HIC1	NA	NA	NA	NA	HIC1	1241	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr17	1987683	1987948	1987816	Y	MNT,SLC43A2,WDR81,HIC1,HIC1	OVCA2,HIC1	NA	NA	NA	NA	HIC1	32235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	1992717	1993096	1992933	Y	SLC43A2,SCARF1,WDR81	OVCA2,HIC1	NA	NA	NA	NA	HIC1	37269	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2040718	2040966	2040824	Y	PAFAH1B1,SCARF1,WDR81	NA	NA	NA	NA	NA	HIC1	85270	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2074761	2075171	2074968	Y	NA	NA	NA	NA	NA	NA	HIC1	119313	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2075592	2075724	2075696	Y	HIC1	NA	NA	NA	NA	NA	HIC1	120144	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	2078039	2078451	2078156	Y	TSR1,HIC1,HIC1	NA	NA	NA	NA	NA	HIC1	122591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2302778	2303366	2303033	Y	SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT	MNT	NA	NA	NA	NA	MNT	366	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr17	2305266	2305571	2305415	Y	RAP1GAP2,PAFAH1B1,MNT	MNT	NA	NA	NA	NA	MNT	2854	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2307434	2307709	2307574	Y	NA	MNT	NA	NA	NA	NA	MNT	5022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2342212	2342433	2342329	Y	PAFAH1B1	MNT	NA	NA	NA	NA	MNT	39800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2397010	2397265	2397138	Y	NA	METTL16	LOC284009	IMR90	Hi-C	24141950	METTL16	15920	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2627139	2627523	2627311	Y	NA	NA	NA	NA	NA	NA	RAP1GAP2	50827	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	2627618	2628097	2628087	Y	NA	NA	NA	NA	NA	NA	RAP1GAP2	50253	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	2652547	2653322	2653300	Y	NA	RAP1GAP2	NA	NA	NA	NA	RAP1GAP2	25028	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	3034001	3034244	3034123	Y	OR3A2,OR1E2,TRPV3,TRPV1,OR1G1,OR1A1,OR1A2	NA	NA	NA	NA	NA	RAP1GAP2	355651	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	3791812	3792145	3792008	Y	GSG2	C17orf85,CAMKK1	NA	NA	NA	NA	CAMKK1	4040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	4205148	4205753	4205440	Y	P2RX1,ATP2A3,ZZEF1,ZMYND15,ZMYND15,SMTNL2,SMTNL2,ARRB2,UBE2G1	ANKFY1	NA	NA	NA	NA	ANKFY1	39874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	4615866	4616105	4615999	Y	MINK1,C17orf107,ARRB2,ZMYND15,ZMYND15,CXCL16	PELP1,RP11-314A20.1,ARRB2,MED11,CXCL16	NA	NA	NA	NA	ARRB2	4082	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	4737531	4737755	4737558	Y	PLD2,MINK1	PSMB6,PLD2,MINK1	NA	NA	NA	NA	MINK1	2848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	4811647	4812042	4811731	Y	NA	RNF167,SLC25A11,PFN1	NA	NA	NA	NA	RNF167	29261	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	4812526	4812616	4812571	Y	SMTNL2,ZNF232,KIF1C	RNF167,SLC25A11,PFN1	NA	NA	NA	NA	RNF167	28687	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	4839784	4839936	4839857	Y	C17orf107	RNF167,SLC25A11,PFN1,SPAG7,CAMTA2	NA	NA	NA	NA	RNF167	1367	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	6478669	6478853	6478761	Y	NA	PITPNM3	NA	NA	NA	NA	PITPNM3	20855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	6541812	6541912	6541862	Y	NA	TXNDC17,KIAA0753,MED31,C17orf100	NA	NA	NA	NA	TXNDC17	166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	6542489	6542952	6542608	Y	NA	TXNDC17,KIAA0753,MED31,C17orf100	NA	NA	NA	NA	KIAA0753	242	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	6790647	6790875	6790776	Y	SLC16A11,DLG4,DLG4	NA	NA	NA	NA	NA	AC027763.2	122793	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr17	6814987	6815378	6815170	Y	DLG4	NA	NA	NA	NA	NA	AC027763.2	98290	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	6822767	6822872	6822855	Y	NA	NA	NA	NA	NA	NA	AC027763.2	90796	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	6839831	6840063	6839905	Y	XAF1,GPS2,GABARAP,EIF5A,ACAP1,RNASEK,C17orf49	NA	LOC100506713,ALOX12,ALOX12P2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AC027763.2	73605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	6925152	6925653	6925481	Y	PLSCR3,C17orf49,BCL6B	AC027763.2,RNASEK,C17orf49,MIR497HG,SLC16A13	NA	NA	NA	NA	MIR497HG	4174	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr17	7115018	7115437	7115195	Y	NA	ACADVL,DLG4,DVL2,PHF23,GABARAP,CTDNEP1	NA	NA	NA	NA	ACADVL	3007	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	7119118	7119286	7119174	Y	WRAP53,EFNB3,AMAC1L3,NLGN2,NEURL4,DLG4	ACADVL,DLG4,DVL2,PHF23,GABARAP,CTDNEP1	NA	NA	NA	NA	ACADVL	674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	7389589	7389989	7389739	Y	C17orf49,GPS2,ACAP1,WRAP53,KDM6B,CHD3,AMAC1L3,ZBTB4,POLR2A	FGF11,ZBTB4,POLR2A	NA	NA	NA	NA	POLR2A	3904	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr17	7657457	7657665	7657600	Y	NLGN2,AMAC1L3,WRAP53	NA	NA	NA	NA	NA	EFNB3	50937	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	7738822	7740614	7739046	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	608	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr17	7745337	7745870	7745591	Y	NA	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	4115	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr17	7745915	7746944	7746139	Y	NA	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	4693	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr17	7746991	7747556	7747325	Y	POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	5769	CAGE	JHUCS-1	hg19	FANTOM5	2.3330050997379
chr17	7790181	7790340	7790322	Y	POLR2A,WRAP53,PER1,CTC1,KDM6B,CHD3,CHD3	KDM6B,CYB5D1,CHD3,LSMD1,AC025335.1,CNTROB,TRAPPC1	NA	NA	NA	NA	LSMD1	3625	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	8029634	8030116	8029995	Y	NA	HES7,PER1,VAMP2,SNORD118,TMEM107	NA	NA	NA	NA	HES7	4224	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr17	8090038	8090540	8090163	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	1024	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	8103328	8103700	8103595	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,PFAS,CTC1	NA	NA	NA	NA	AURKB	8218	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr17	8517371	8517653	8517512	Y	NA	MYH10	NA	NA	NA	NA	MYH10	14426	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	8531412	8531868	8531658	Y	NA	MYH10	NA	NA	NA	NA	MYH10	211	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	8532647	8532776	8532657	Y	KRBA2	MYH10	NA	NA	NA	NA	MYH10	568	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	9155924	9156306	9156115	Y	PIK3R5	NA	NA	NA	NA	NA	NTN1	233065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	9258278	9258564	9258422	Y	NA	NA	NA	NA	NA	NA	STX8	219344	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	9355317	9355480	9355419	Y	WDR16	NA	NA	NA	NA	NA	STX8	122428	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	9924626	9924875	9924814	Y	NA	NA	NA	NA	NA	NA	RPS27AP1	235204	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	9981257	9981536	9981397	Y	NA	NA	NA	NA	NA	NA	RPS27AP1	178543	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	10581804	10582199	10582113	Y	MYH4	SCO1,TMEM220	NA	NA	NA	NA	SCO1	17493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	11266931	11267244	11267127	Y	NA	NA	NA	NA	NA	NA	SHISA6	124351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	13412933	13413137	13413069	Y	NA	NA	NA	NA	NA	NA	ELAC2	493429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	14105008	14105251	14105153	Y	COX10,HS3ST3B1	NA	NA	NA	NA	NA	COX10	134195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	15170081	15170165	15170113	Y	NA	PMP22	NA	NA	NA	NA	PMP22	3438	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	15363919	15364293	15364237	Y	NA	NA	NA	NA	NA	NA	SNORA74	111040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	15860629	15861165	15860792	Y	ADORA2B,ZSWIM7,TTC19	ADORA2B,TTC19,ZSWIM7	NA	NA	NA	NA	ADORA2B	14398	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	15862469	15862773	15862614	Y	ADORA2B,ZSWIM7,TTC19	ADORA2B,TTC19,ZSWIM7	NA	NA	NA	NA	ADORA2B	16238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	15869590	15869983	15869922	Y	NA	ADORA2B,TTC19,ZSWIM7	NA	NA	NA	NA	ADORA2B	23359	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	15923170	15923610	15923287	Y	FAM18B2,ZNF286A,NCOR1,TTC19,ZSWIM7	TTC19,ZSWIM7	NA	NA	NA	NA	ZSWIM7	22139	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	15959345	15959465	15959410	Y	FAM18B2,ZNF286A,NCOR1,PIGL,NCOR1,C17orf76,TTC19,ZSWIM7	NA	NA	NA	NA	NA	ZSWIM7	58314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	16035892	16036125	16036009	Y	NA	NA	NA	NA	NA	NA	PIGL	82380	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	16249780	16250130	16249956	Y	CENPV	CENPV,UBB	NA	NA	NA	NA	CENPV	4840	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	16310492	16310776	16310647	Y	NA	UBB	TRPV2,C17orf76-AS1	MCF7	ChIA-PET	22265404	UBB	28380	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	16374519	16374788	16374546	Y	NA	FAM211A	NA	NA	NA	NA	FAM211A	18679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	16419408	16419751	16419580	Y	NA	FAM211A	FAM211A,CENPV,UBB,TRPV2,C17orf76-AS1,ZNF287	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FAM211A	25941	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	16438910	16439232	16439111	Y	NA	FAM211A,ZNF287	NA	NA	NA	NA	ZNF287	31288	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr17	16944636	16944769	16944688	Y	NA	MPRIP	NA	NA	NA	NA	MPRIP	777	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	17208754	17209324	17209000	Y	PLD6,COPS3,COPS3,NT5M	COPS3,NT5M	NA	NA	NA	NA	NT5M	4105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	17597479	17598220	17598134	Y	ALKBH5,FLCN,COPS3	RAI1	NA	NA	NA	NA	RAI1	14692	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr17	17654001	17654381	17654093	Y	NA	NA	NA	NA	NA	NA	RAI1	71214	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	17655489	17655938	17655636	Y	DRG2,ALKBH5,COPS3,MED9	NA	NA	NA	NA	NA	RAI1	72702	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	17686462	17687119	17686716	Y	NA	NA	NA	NA	NA	NA	SREBF1	51206	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	17687276	17687668	17687631	Y	NA	NA	NA	NA	NA	NA	SREBF1	50657	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	17817256	17817562	17817444	Y	SREBF1	NA	NA	NA	NA	NA	TOM1L2	56174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	17874756	17875050	17874778	Y	NA	TOM1L2,LRRC48	NA	NA	NA	NA	LRRC48	629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	19141562	19141875	19141665	Y	RNF112,EPN2	NA	NA	NA	NA	NA	SNORD3D	127613	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	19147768	19147949	19147793	Y	PRPSAP2,RNF112	NA	NA	NA	NA	NA	MAPK7	131085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	19273192	19273452	19273316	Y	FAM83G,MAPK7,MAPK7	MAPK7,B9D1,MFAP4,RNF112	NA	NA	NA	NA	MAPK7	5582	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	19760986	19761170	19761020	Y	NA	ULK2	NA	NA	NA	NA	ULK2	8079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	19883392	19883621	19883525	Y	NA	AKAP10,SPECC1	NA	NA	NA	NA	AKAP10	3736	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	19913206	19913926	19913276	Y	ULK2,AKAP10	AKAP10,SPECC1	NA	NA	NA	NA	SPECC1	2549	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	20688064	20688832	20688343	Y	NA	SCDP1	NA	NA	NA	NA	SCDP1	2106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	20943914	20944165	20944106	Y	NA	USP22,AC087393.1	NA	NA	NA	NA	USP22	908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	21002403	21002809	21002523	Y	KCNJ18	AC087393.1,DHRS7B	USP22,C17orf103	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DHRS7B	21868	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	21179100	21179414	21179208	Y	CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3	C17orf103,MAP2K3	MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAP2K3	6570	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	25409900	25410125	25410078	Y	NA	NA	NA	NA	NA	NA	WSB1	208977	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	25415234	25415538	25415430	Y	NA	NA	NA	NA	NA	NA	WSB1	203564	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	25659975	25660361	25659997	Y	NA	WSB1	NA	NA	NA	NA	WSB1	40873	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	25680632	25681097	25680982	Y	NA	NA	KSR1,WSB1,MIR4522	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WSB1	61530	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr17	25794670	25794745	25794710	Y	NA	KSR1	TBC1D3P5,KSR1	IMR90	Hi-C	24141950	KSR1	13000	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	26214261	26214593	26214427	Y	NA	NA	NA	NA	NA	NA	NLK	152170	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	26578773	26579067	26578920	Y	NA	NA	NA	NA	NA	NA	TMEM97	65054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	26734916	26735044	26734980	Y	NA	SARM1,SLC46A1	NA	NA	NA	NA	SLC46A1	2701	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	27104790	27105049	27104918	Y	SEBOX	TRAF4	NA	NA	NA	NA	TRAF4	35788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	27116093	27116114	27116106	Y	NA	TRAF4	NA	NA	NA	NA	TRAF4	47091	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	27118575	27118718	27118697	Y	NA	TRAF4	NA	NA	NA	NA	TRAF4	49573	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	27220048	27220212	27220121	Y	NA	ERAL1,FLOT2,DHRS13	NA	NA	NA	NA	FLOT2	2485	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	27264479	27264617	27264556	Y	UNC119,SDF2,FLOT2,TIAF1,TAOK1,NUFIP2,PHF12	FLOT2,DHRS13,PHF12	NA	NA	NA	NA	PHF12	12172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	27405810	27406234	27406188	Y	NA	NA	NA	NA	NA	NA	SEZ6	74352	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	27475765	27476166	27476073	Y	NEK8,PHF12	MYO18A	NA	NA	NA	NA	MYO18A	29264	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	27619094	27619880	27619581	Y	TAOK1	NA	NA	NA	NA	NA	NUFIP2	0	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr17	27814311	27814661	27814484	Y	NA	NA	NA	NA	NA	NA	TP53I13	76409	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	27824938	27824945	27824941	Y	TIAF1,MYO18A,TAOK1,EFCAB5,ANKRD13B	NA	NA	NA	NA	NA	TP53I13	66125	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	27918652	27918967	27918817	Y	GIT1,EFCAB5,ANKRD13B	TP53I13,ABHD15,ANKRD13B,GIT1,CORO6	NA	NA	NA	NA	GIT1	105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	28009923	28010244	28010118	Y	SSH2	NA	NA	NA	NA	NA	CORO6	61998	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	28019224	28019454	28019389	Y	NSRP1,NUFIP2,TAOK1,SSH2	NA	NA	NA	NA	NA	CORO6	71299	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	28033249	28033691	28033498	Y	NUFIP2,TAOK1,SSH2	NA	NA	NA	NA	NA	CORO6	85324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	28041794	28041800	28041797	Y	NA	NA	NA	NA	NA	NA	CORO6	93869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	28716902	28717301	28716970	Y	SSH2,NSRP1,CPD,CPD,GOSR1	CPD	NA	NA	NA	NA	CPD	12979	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	29115484	29115559	29115508	Y	NA	CRLF3,CTD-2349P21.1,ATAD5	NA	NA	NA	NA	CRLF3	34235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	29212303	29212381	29212342	Y	OMG,NF1,C17orf42	ADAP2,TEFM	NA	NA	NA	NA	ADAP2	18981	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	29423002	29423667	29423241	Y	NA	NF1	NA	NA	NA	NA	NF1	3057	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	29876692	29877391	29877039	Y	NA	NA	NA	NA	NA	NA	RAB11FIP4	160050	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	30007068	30007435	30007339	Y	RHOT1,EVI2B,EVI2A	NA	RAB11FIP4,C17orf79,MIR193A,MIR4725,MIR365B	IMR90	Hi-C	24141950	UTP6	219349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	30335785	30336145	30335965	Y	NA	NA	NA	NA	NA	NA	SUZ12	73748	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	30593810	30594211	30593930	Y	NA	RHBDL3	NA	NA	NA	NA	RHBDL3	2615	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	30723443	30723679	30723561	Y	NA	C17orf75,ZNF207,PSMD11	NA	NA	NA	NA	PSMD11	45600	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	30724674	30725107	30724769	Y	RHOT1	C17orf75,ZNF207,PSMD11	NA	NA	NA	NA	PSMD11	44172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	30778136	30778420	30778202	Y	ZNF207	PSMD11,CDK5R1	NA	NA	NA	NA	PSMD11	8857	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	30846365	30846870	30846526	Y	NA	CDK5R1	NA	NA	NA	NA	CDK5R1	34728	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	30847234	30847756	30847477	Y	NA	CDK5R1	NA	NA	NA	NA	CDK5R1	35597	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	30907001	30907345	30907172	Y	NA	NA	NA	NA	NA	NA	CDK5R1	95364	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	30954292	30954689	30954451	Y	CDK5R1	NA	NA	NA	NA	NA	CDK5R1	142655	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	31155018	31155230	31155072	Y	MYO1D	MYO1D	NA	NA	NA	NA	MYO1D	46965	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	32586301	32586443	32586414	Y	NA	CCL2	NA	NA	NA	NA	CCL2	5997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	32714202	32714519	32714358	Y	CCL2,CCL7,CCL8,CCL1	NA	ACCN1,CCT6B,ZNF830,NLE1	IMR90	Hi-C	24141950	CCL2	133898	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	32726028	32726450	32726214	Y	CCL2,CCL7,CCL8,CCL1	NA	ACCN1	IMR90	Hi-C	24141950	CCL2	145724	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	32740825	32740928	32740881	Y	CCL2,CCL7,CCL8,CCL1	NA	NLE1,TMEM132E,CCT6B,ZNF830	IMR90	Hi-C	24141950	CCL2	160521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	33383216	33383365	33383329	Y	SLFN5,RFFL	RFFL	NA	NA	NA	NA	RFFL	30973	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	33391990	33392005	33391998	Y	NA	RFFL	NA	NA	NA	NA	RFFL	22333	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	33407531	33407770	33407731	Y	NA	RFFL,RAD51D	NA	NA	NA	NA	RFFL	6568	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	33786708	33787098	33786905	Y	NA	NA	NA	NA	NA	NA	SLFN11	87988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	34160214	34160648	34160302	Y	NA	TAF15	NA	NA	NA	NA	TAF15	25755	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr17	34838937	34839070	34839023	Y	NA	ZNHIT3,PIGW	NA	NA	NA	NA	ZNHIT3	1403	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	34871446	34871455	34871448	Y	NA	ZNHIT3,PIGW,MYO19,GGNBP2	NA	NA	NA	NA	PIGW	17392	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	34875469	34875747	34875679	Y	NA	ZNHIT3,PIGW,MYO19,GGNBP2	NA	NA	NA	NA	PIGW	13100	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	34948982	34949076	34949029	Y	DHRS11	DHRS11,MRM1	NA	NA	NA	NA	DHRS11	2754	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	35078576	35079010	35078700	Y	NA	NA	LHX1,AATF,ACACA,MRM1,DHRS11	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	MRM1	122575	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	35292129	35292558	35292512	Y	ACACA,LHX1,AATF	AATF	NA	NA	NA	NA	AATF	11617	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	35296825	35297078	35296886	Y	LHX1	AATF	NA	NA	NA	NA	AATF	7097	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	35446954	35447324	35447190	Y	NA	NA	NA	NA	NA	NA	AATF	142779	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	35492690	35492856	35492817	Y	NA	NA	NA	NA	NA	NA	AATF	188515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	35520107	35520138	35520123	Y	ACACA	NA	NA	NA	NA	NA	AATF	215932	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	36412216	36412471	36412263	Y	NA	RP11-1407O15.2,MRPL45	NA	NA	NA	NA	RP11-1407O15.2	7387	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	36480536	36480738	36480637	Y	NA	MRPL45,SOCS7	NA	NA	NA	NA	SOCS7	25373	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	36571646	36572076	36571709	Y	C17orf96	ARHGAP23	NA	NA	NA	NA	ARHGAP23	10586	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	36721617	36722002	36721810	Y	ARHGAP23,SRCIN1	SRCIN1	NA	NA	NA	NA	SRCIN1	38181	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	37366071	37366159	37366135	Y	STAC2	CACNB1,RPL19,STAC2	NA	NA	NA	NA	RPL19	11535	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	37845270	37845675	37845499	Y	NA	ERBB2,PGAP3,MIEN1	NA	NA	NA	NA	ERBB2	3103	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	37910411	37911394	37910787	Y	FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3	MIEN1	NA	NA	NA	NA	MIEN1	25371	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	37926668	37927007	37926744	Y	FBXL20,CDK12,ERBB2,ORMDL3,IKZF3,CASC3	MIEN1	NA	NA	NA	NA	MIEN1	41628	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	38463315	38463694	38463488	Y	RARA	CDC6	NA	NA	NA	NA	RARA	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	38514847	38514935	38514891	Y	NA	NA	NA	NA	NA	NA	RARA	51403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	38607821	38607996	38607876	Y	NA	TOP2A,IGFBP4	NA	NA	NA	NA	IGFBP4	10119	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	39572335	39572530	39572426	Y	NA	NA	NA	NA	NA	NA	KRT17	206564	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	39822130	39822941	39822323	Y	NA	KRT17,EIF1	KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	EIF1	20196	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	39823354	39823685	39823437	Y	NA	KRT17,EIF1	KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	EIF1	19452	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	40400517	40401003	40400833	Y	EZH1,KLHL11,RAB5C,STAT3,STAT3,FAM134C,STAT5B,STAT5A	STAT5B,STAT5A	NA	NA	NA	NA	STAT5B	25722	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	40628029	40628344	40628111	Y	NA	ATP6V0A1,AC067852.1	NA	NA	NA	NA	ATP6V0A1	19167	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	40689876	40689925	40689901	Y	NA	AC067852.1,NAGLU,COASY,MLX,PSMC3IP	NA	NA	NA	NA	NAGLU	3686	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	41478754	41478975	41478864	Y	ARL4D	ARL4D	NA	NA	NA	NA	ARL4D	4427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	41827198	41827473	41827372	Y	NA	DUSP3	NA	NA	NA	NA	DUSP3	26883	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	42173326	42173627	42173470	Y	NA	LSM12,G6PC3,HDAC5,C17orf53	NA	NA	NA	NA	HDAC5	25443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	42198947	42199210	42199140	Y	NA	C17orf53	NA	NA	NA	NA	HDAC5	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	42276572	42276897	42276785	Y	TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3	TMUB2,ATXN7L3,UBTF	NA	NA	NA	NA	ATXN7L3	1091	CAGE	JHUCS-1	hg19	FANTOM5	3.33286442819699
chr17	42347402	42347673	42347539	Y	UBTF,SLC4A1,SLC25A39	RUNDC3A	NA	NA	NA	NA	RUNDC3A	36108	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	42634020	42634172	42634095	Y	TMUB2,TMUB2,GRN,FZD2	NA	NA	NA	NA	NA	GPATCH8	55222	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	42797981	42798248	42798116	Y	CCDC43	CCDC43,DBF4B,RP11-1072C15.1,ADAM11	NA	NA	NA	NA	RP11-1072C15.1	2016	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	43095998	43096402	43096133	Y	NA	NMT1,DCAKD	NA	NA	NA	NA	NMT1	30576	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	43249989	43250354	43250021	Y	ADAM11,HIGD1B,GFAP,DCAKD	ACBD4,PLCD3,HEXIM1,HEXIM2,FMNL1	NA	NA	NA	NA	HEXIM2	13922	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	43660811	43661173	43660906	Y	ACBD4,FMNL1,PLEKHM1	CRHR1	NA	NA	NA	NA	CRHR1	36094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	43951029	43951274	43951198	Y	NA	MAPT	NA	NA	NA	NA	MAPT	18474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	44131950	44132178	44132002	Y	KIAA1267,KIAA1267	NA	NA	NA	NA	NA	MAPT	162202	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	44135698	44135955	44135827	Y	NA	NA	NA	NA	NA	NA	MAPT	165950	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	44155479	44155559	44155517	Y	NA	NA	NA	NA	NA	NA	MAPT	185731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	44232468	44232502	44232485	Y	NA	NA	NA	NA	NA	NA	MAPT	262720	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	44234299	44234706	44234578	Y	NA	NA	NA	NA	NA	NA	MAPT	264551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	44240473	44240874	44240856	Y	NA	NA	NA	NA	NA	NA	MAPT	270725	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	44261899	44262225	44262045	Y	NA	NA	NA	NA	NA	NA	MAPT	292151	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	44344171	44344471	44344293	Y	NA	NA	KANSL1-AS1,KANSL1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MAPT	374423	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	44848812	44849347	44849259	Y	NA	NA	NA	NA	NA	NA	RPS7P11	51279	CAGE	JHUCS-1	hg19	FANTOM5	2.49964832114774
chr17	45144155	45144236	45144196	Y	NA	NA	NPEPPS	IMR90	Hi-C	24141950	RPRML	89541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	45515544	45515843	45515768	Y	NA	NA	NA	NA	NA	NA	NPEPPS	82465	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	45609469	45609601	45609554	Y	NA	NPEPPS	NA	NA	NA	NA	NPEPPS	11161	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr17	45771013	45771467	45771041	Y	NPEPPS,OSBPL7,CDK5RAP3,TBX21,TBKBP1	KPNB1	NA	NA	NA	NA	KPNB1	46171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	45867525	45867625	45867557	Y	NA	OSBPL7,MRPL10,LRRC46,SCRN2	NA	NA	NA	NA	OSBPL7	29575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	46080436	46080890	46080812	Y	CDK5RAP3	CDK5RAP3,COPZ2,NFE2L1	NA	NA	NA	NA	COPZ2	32502	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	46089554	46089940	46089788	Y	CBX1,CBX1,CDK5RAP3	CDK5RAP3,COPZ2,NFE2L1	NA	NA	NA	NA	COPZ2	23452	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	46102426	46102830	46102617	Y	NA	COPZ2,NFE2L1	NA	NA	NA	NA	COPZ2	10562	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	46168455	46168716	46168586	Y	NA	NFE2L1,CBX1,SNX11	NA	NA	NA	NA	CBX1	8167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	46217226	46217562	46217317	Y	CDK5RAP3,SKAP1	CBX1,SNX11	NA	NA	NA	NA	SNX11	38507	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	46226881	46226967	46226912	Y	TBX21,OSBPL7,LRRC46,SKAP1	CBX1,SNX11	SNX11	IMR90	Hi-C	24141950	SNX11	48162	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	47270202	47270509	47270359	Y	CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3	PHOSPHO1	NA	NA	NA	NA	PHOSPHO1	35619	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	47647130	47647802	47647650	Y	NA	NXPH3	ZNF652,NGFR,SPOP,SLC35B1,NXPH3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NXPH3	3418	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	47913501	47913854	47913589	Y	TMEM92	KAT7,FAM117A,RP11-613C6.4	NA	NA	NA	NA	RP11-613C6.4	42796	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	48208282	48208563	48208423	Y	NA	PDK2,SAMD14,PPP1R9B	NA	NA	NA	NA	SAMD14	3036	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	48338432	48338651	48338443	Y	EPN3	NA	LOC284080,ITGA3,PDK2,SAMD14,PPP1R9B,COL1A1,HILS1,SGCA,TMEM92	IMR90	Hi-C	24141950	COL1A1	61439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	48421685	48421964	48421826	Y	NA	XYLT2,MRPL27,EME1	NA	NA	NA	NA	XYLT2	232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	48908408	48908498	48908454	Y	NA	TOB1	TOB1,LOC400604,SPAG9,LINC00483	IMR90	Hi-C	24141950	TOB1	34841	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	48942663	48943085	48943016	Y	NA	TOB1	NA	NA	NA	NA	TOB1	254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	48996944	48997365	48997235	Y	UTP18,RSAD1,TOB1	NA	LOC400604,TOB1,WFIKKN2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TOB1	53605	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr17	49008376	49008926	49008868	Y	NA	NA	WFIKKN2,TOB1,LOC400604,LINC00483,ANKRD40,SPAG9	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TOB1	65037	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	49031638	49031879	49031784	Y	NA	NA	NA	NA	NA	NA	TOB1	88299	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	49142836	49143005	49142922	Y	NA	NA	NA	NA	NA	NA	SPAG9	53221	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	50114812	50114981	50114897	Y	NA	NA	NA	NA	NA	NA	CA10	120396	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	50134051	50134402	50134227	Y	CA10,CA10,CA10	NA	NA	NA	NA	NA	CA10	100975	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	51059537	51059872	51059705	Y	NA	NA	NA	NA	NA	NA	RPS2P48	773359	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	53006732	53007120	53006925	Y	NA	TOM1L1,STXBP4,COX11	NA	NA	NA	NA	TOM1L1	31984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	53017345	53017570	53017451	Y	TOM1L1	TOM1L1,STXBP4,COX11	NA	NA	NA	NA	STXBP4	26518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	53034991	53035170	53035032	Y	NA	STXBP4,COX11	NA	NA	NA	NA	STXBP4	8918	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	53315618	53315983	53315841	Y	HLF	HLF	STXBP4,HLF	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HLF	24390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	54947312	54947763	54947640	Y	SCPEP1,TRIM25	DGKE,C17orf67,TRIM25	NA	NA	NA	NA	C17orf67	33178	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	54996234	54996798	54996647	Y	SCPEP1,TRIM25	TRIM25,COIL	NA	NA	NA	NA	TRIM25	6835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	55540558	55540950	55540705	Y	NA	NA	NA	NA	NA	NA	MSI2	209346	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	55951789	55952442	55952113	Y	SRSF1,MKS1,MKS1,BZRAP1,MRPS23	MRPS23	NA	NA	NA	NA	MRPS23	26372	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr17	56064193	56064677	56064258	Y	NA	CUEDC1,VEZF1,SRSF1	NA	NA	NA	NA	VEZF1	573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	56391648	56391970	56391957	Y	NA	BZRAP1,SUPT4H1	NA	NA	NA	NA	BZRAP1	12182	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	56428194	56428499	56428372	Y	VEZF1,MTMR4,SUPT4H1	BZRAP1	NA	NA	NA	NA	SUPT4H1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	56587640	56587744	56587729	Y	PPM1E,DYNLL2,MKS1,SEPT4,MTMR4	MTMR4,SEPT4	NA	NA	NA	NA	MTMR4	5522	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	56736656	56737064	56736885	Y	MTMR4,SEPT4,SEPT4,PPM1E	RNU1-60P,RNU1-85P,RAD51C	SEPT4,C17orf47	K562,MCF7	ChIA-PET	22265404	RNU1-60P	1990	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	56989340	56989615	56989430	Y	NA	NA	NA	NA	NA	NA	PPM1E	158110	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57001683	57001915	57001793	Y	SEPT4,PPM1E,GDPD1	NA	NA	NA	NA	NA	PPM1E	170453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57046055	57046358	57046140	Y	SEPT4	NA	NA	NA	NA	NA	AC099850.1	135601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57200500	57200626	57200599	Y	GDPD1	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	TRIM37	18218	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	57231102	57231481	57231293	Y	C17orf71	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	PRR11	242	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57231530	57231848	57231723	Y	NA	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	PRR11	670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57409690	57409997	57409875	Y	YPEL2	YPEL2	NA	NA	NA	NA	YPEL2	2640	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57434419	57434635	57434527	Y	NA	YPEL2	NA	NA	NA	NA	YPEL2	27369	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57698412	57698732	57698592	Y	YPEL2,RNFT1,VMP1	CLTC	NA	NA	NA	NA	CLTC	3193	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	57860256	57860659	57860446	Y	DHX40,VMP1,CA4	NA	NA	NA	NA	NA	MIR21	55968	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57902814	57903248	57902913	Y	YPEL2,VMP1,RNFT1	MIR21	NA	NA	NA	NA	MIR21	13379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	57930626	57931026	57930760	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	13999	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	58212242	58212405	58212344	Y	NA	CA4	C17orf64,HEATR6,LOC645638,USP32,APPBP2,LOC653653	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CA4	12892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	58220284	58220524	58220391	Y	VMP1,USP32,PPM1D,CA4	CA4	HEATR6,PPM1D,USP32,APPBP2	MCF7	ChIA-PET	22265404	CA4	4773	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	58468371	58468697	58468395	Y	BCAS3,RNFT1,CA4,PPM1D,USP32	USP32	NA	NA	NA	NA	USP32	29134	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	58678620	58678973	58678714	Y	PPM1D	PPM1D	NA	NA	NA	NA	PPM1D	3076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	59213347	59213460	59213422	Y	TBX4,TBX2	NA	NA	NA	NA	NA	TBX2	261797	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	59474585	59474918	59474715	Y	NA	TBX2	NA	NA	NA	NA	TBX2	339	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	59939507	59939855	59939761	Y	BRIP1	BRIP1	NA	NA	NA	NA	BRIP1	625	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	60085676	60086036	60086030	Y	NACA2,MED13	NA	NA	NA	NA	NA	MED13	54607	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	61043121	61043648	61043243	Y	NA	NA	NA	NA	NA	NA	MARCH10	159416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	61323201	61323584	61323320	Y	NA	NA	MIR548W	IMR90	Hi-C	24141950	CYB561	198155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	61356227	61356695	61356586	Y	MAP3K3,LIMD2	NA	MIR548W,MARCH10	IMR90	Hi-C	24141950	CYB561	165044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	61370802	61371122	61370929	Y	MAP3K3,LIMD2	NA	MIR548W	IMR90	Hi-C	24141950	CYB561	150617	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	61639369	61639739	61639552	Y	NA	KCNH6,DCAF7,TACO1	NA	NA	NA	NA	DCAF7	13547	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	61748394	61748578	61748486	Y	NA	LIMD2	NA	NA	NA	NA	LIMD2	27954	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	61787185	61787371	61787278	Y	NA	LIMD2,STRADA	NA	NA	NA	NA	LIMD2	10653	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	62159440	62159790	62159613	Y	MAP3K3,LIMD2,ICAM2,PECAM1,DDX5,CEP95,ERN1	ERN1	NA	NA	NA	NA	ERN1	46389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	62258830	62259200	62259015	Y	SCN4A	SNORD104	NA	NA	NA	NA	SNORD104	37387	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	62339620	62339793	62339707	Y	CEP95	TEX2	NA	NA	NA	NA	TEX2	959	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	63035715	63036037	63035950	Y	GNA13	GNA13	NA	NA	NA	NA	GNA13	14920	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	63044063	63044405	63044261	Y	GNA13	GNA13	NA	NA	NA	NA	GNA13	6552	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	63119249	63119621	63119552	Y	GNA13	RGS9	RGS9,GNA13,AMZ2P1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RGS9	11928	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	63639930	63640399	63640359	Y	NA	NA	NA	NA	NA	NA	AXIN2	84165	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	63646847	63647018	63646933	Y	NA	NA	NA	NA	NA	NA	AXIN2	91082	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	64194072	64194322	64194164	Y	NA	CEP112	NA	NA	NA	NA	CEP112	7870	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	64690651	64690854	64690753	Y	PRKCA,CACNG4	NA	NA	NA	NA	NA	CACNG5	138381	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	64796276	64796554	64796503	Y	NA	CACNG5	NA	NA	NA	NA	CACNG5	32681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	64962057	64962755	64962345	Y	NA	CACNG4	NA	NA	NA	NA	CACNG4	3031	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	64963064	64963179	64963122	Y	NA	CACNG4	NA	NA	NA	NA	CACNG4	4038	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	65389377	65389540	65389482	Y	HELZ,BPTF,PITPNC1	PSMD12,PITPNC1	NA	NA	NA	NA	PITPNC1	17802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	66016045	66016315	66016119	Y	NA	C17orf58,KPNA2	BPTF,C17orf58,KPNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KPNA2	13320	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr17	66209510	66209898	66209720	Y	NA	AMZ2,ARSG	NA	NA	NA	NA	AMZ2	31817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	66376984	66377775	66377396	Y	NA	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	73879	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	66380161	66380700	66380381	Y	SLC16A6	NA	NA	NA	NA	NA	WIPI1	70954	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	66482349	66482452	66482401	Y	NA	WIPI1,PRKAR1A	NA	NA	NA	NA	PRKAR1A	23469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	67315191	67315526	67315500	Y	NA	ABCA5	NA	NA	NA	NA	ABCA5	5859	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	68118896	68119283	68118909	Y	NA	KCNJ2	NA	NA	NA	NA	KCNJ2	43531	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	68286289	68286704	68286515	Y	KCNJ2	NA	MAP2K6	IMR90	Hi-C	24141950	KCNJ2	123475	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	70706379	70706638	70706553	Y	NA	NA	NA	NA	NA	NA	RPL32P33	85009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	71152430	71152655	71152530	Y	C17orf80,SSTR2	SSTR2,COG1	NA	NA	NA	NA	SSTR2	6496	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	71200352	71200549	71200451	Y	NA	SSTR2,COG1,C17orf80,FAM104A	NA	NA	NA	NA	COG1	13223	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	71304431	71304616	71304518	Y	NA	CDC42EP4	NA	NA	NA	NA	CDC42EP4	1698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	71339324	71339501	71339471	Y	SSTR2,CDC42EP4	CDC42EP4	NA	NA	NA	NA	CDC42EP4	33010	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	71603632	71603970	71603800	Y	NA	SDK2	NA	NA	NA	NA	SDK2	34258	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	71639437	71639585	71639501	Y	SDK2	SDK2	NA	NA	NA	NA	SDK2	1209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	72745955	72746124	72746086	Y	NA	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	SLC9A3R1	3164	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	72746451	72746964	72746655	Y	NA	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	SLC9A3R1	3660	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	72775758	72775904	72775844	Y	CD300A,CD300LB,CD300C,CD300LF	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	TMEM104	5136	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	72978355	72978661	72978434	Y	KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L	CDR2L,ICT1,KCTD2	CDR2L,ICT1,C17orf28,HN1	MCF7,K562	ChIA-PET	22265404	CDR2L	3066	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr17	72984795	72985307	72985001	Y	RAB37,CDR2L	CDR2L,ICT1,KCTD2	NA	NA	NA	NA	CDR2L	3068	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	72989354	72989561	72989458	Y	NA	CDR2L,ICT1,KCTD2	NA	NA	NA	NA	CDR2L	7627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	73007152	73007476	73007237	Y	RAB37,GRIN2C,C17orf28,CDR2L,SUMO2,NUP85,KCTD2,ARMC7	CDR2L,ICT1,KCTD2,ATP5H	NA	NA	NA	NA	ICT1	387	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	73007918	73008254	73008160	Y	RAB37,GRIN2C,FADS6,C17orf28,CDR2L,SUMO2,KCTD2,ARMC7	CDR2L,ICT1,KCTD2,ATP5H	NA	NA	NA	NA	ICT1	1153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	73009835	73009966	73009891	Y	NA	CDR2L,ICT1,KCTD2,ATP5H	NA	NA	NA	NA	ICT1	3070	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	73133469	73133809	73133510	Y	NA	ARMC7,NT5C,HN1,SUMO2	NA	NA	NA	NA	NT5C	7579	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	73167917	73168048	73167983	Y	NA	NT5C,HN1,SUMO2,NUP85	HN1	MCF7,K562	ChIA-PET	22265404	HN1	5541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	73304838	73305233	73305159	Y	UNK,SAP30BP,H3F3B,GRB2,GRB2,SLC16A5,GGA3,SLC25A19	MRPS7,GGA3,MIF4GD,SLC25A19	NA	NA	NA	NA	SLC25A19	21247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	73351805	73351921	73351820	Y	NA	GRB2	NA	NA	NA	NA	GRB2	47869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	73805010	73805399	73805102	Y	NA	GALK1,UNK,H3F3B,WBP2	NA	NA	NA	NA	H3F3B	25036	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	73891396	73891618	73891569	Y	NA	WBP2,TRIM47,TRIM65,MRPL38,FBF1	NA	NA	NA	NA	TRIM65	312	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr17	74188017	74188310	74188175	Y	RNF157,FAM100B	ATF4P3,RNF157	NA	NA	NA	NA	ATF4P3	32577	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	74195648	74195812	74195731	Y	UBE2O,AANAT,FBF1,RNF157,FAM100B	ATF4P3,RNF157	NA	NA	NA	NA	ATF4P3	25075	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	74230873	74231079	74230976	Y	NA	ATF4P3,RNF157	NA	NA	NA	NA	RNF157	3375	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	74341579	74341976	74341749	Y	NA	SPHK1,PRPSAP1	NA	NA	NA	NA	SPHK1	28689	CAGE	JHUCS-1	hg19	FANTOM5	2.99957798537729
chr17	74413626	74413718	74413672	Y	NA	SPHK1,PRPSAP1,UBE2O	NA	NA	NA	NA	UBE2O	33570	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	74415585	74415933	74415760	Y	MFSD11,RNF157	SPHK1,PRPSAP1,UBE2O	NA	NA	NA	NA	UBE2O	31355	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	74583031	74583415	74583256	Y	NA	CYGB,ST6GALNAC2	NA	NA	NA	NA	ST6GALNAC2	1993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	75430734	75431332	75430992	Y	NA	NA	NA	NA	NA	NA	SEPT9	156083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	75468767	75469129	75469011	Y	NA	NA	NA	NA	NA	NA	SEPT9	194116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	75798844	75799281	75799210	Y	TNRC6C,TMEM235	NA	LOC100507351,TNRC6C	IMR90	Hi-C	24141950	TMC6	327207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	75883563	75884329	75884163	Y	TNRC6C,TMC8,TMC6,TMC6,SOCS3,PGS1	NA	NA	NA	NA	NA	TMC6	242159	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	75954393	75954796	75954614	Y	NA	NA	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TMC6	171692	CAGE	JHUCS-1	hg19	FANTOM5	20.8304026762312
chr17	75955923	75956319	75956134	Y	TMC8,TMC6,TMC6,TNRC6C	NA	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TMC6	170169	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	76169246	76169385	76169328	Y	PGS1,SYNGR2	TMC6,SYNGR2,TK1,AFMID,BIRC5	NA	NA	NA	NA	SYNGR2	6607	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	76348964	76349371	76349046	Y	USP36,CYTH1,TMC6,TMC8,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	4787	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	76357167	76357466	76357379	Y	NA	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	3009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	76858403	76858717	76858585	Y	PGS1,CYTH1,ENGASE,USP36	USP36	NA	NA	NA	NA	USP36	22880	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	76875667	76876103	76875916	Y	CYTH1,ENGASE,CANT1	USP36,TIMP2	NA	NA	NA	NA	USP36	40144	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	76919844	76920193	76919970	Y	CYTH1,CANT1	TIMP2	NA	NA	NA	NA	TIMP2	375	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	77342987	77343267	77343127	Y	RBFOX3	NA	NA	NA	NA	NA	ENGASE	273966	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	77477772	77477851	77477785	Y	NA	NA	NA	NA	NA	NA	CBX2	272080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	77702456	77702572	77702532	Y	NA	CBX2	NA	NA	NA	NA	CBX2	47359	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	77778056	77778248	77778123	Y	CBX2,CBX8	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	4574	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	77778301	77778701	77778443	Y	CBX2,CBX8,CBX4	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	4819	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	77783959	77784243	77784073	Y	CBX2,CBX8	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	10477	CAGE	JHUCS-1	hg19	FANTOM5	2.99957798537729
chr17	77787297	77787609	77787349	Y	NA	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	13815	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr17	77803693	77803802	77803748	Y	NA	CBX8,CBX4	NA	NA	NA	NA	CBX4	7426	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	77814369	77814482	77814427	Y	NA	CBX8,CBX4	NA	NA	NA	NA	CBX4	3141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	77952311	77952542	77952488	Y	NA	NA	NA	NA	NA	NA	TBC1D16	55105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	77967532	77967765	77967641	Y	CBX8,CBX4,RNF213,GAA,EIF4A3	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	39882	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr17	78428203	78429274	78428566	Y	NA	ENDOV,NPTX1	NA	NA	NA	NA	NPTX1	20369	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr17	78524165	78524352	78524226	Y	NA	RPL32P31,RPTOR	NA	NA	NA	NA	RPTOR	7546	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	78669175	78669353	78669258	Y	NA	NA	NA	NA	NA	NA	RPTOR	152556	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	78724836	78725014	78724914	Y	NA	NA	NA	NA	NA	NA	RPTOR	208217	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	78747049	78747482	78747085	Y	NA	NA	NA	NA	NA	NA	CHMP6	215916	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	78747875	78748340	78748187	Y	NA	NA	NA	NA	NA	NA	CHMP6	215058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	78754047	78754707	78754061	Y	NA	NA	NA	NA	NA	NA	CHMP6	208691	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	78806684	78807307	78807121	Y	C17orf56	NA	NA	NA	NA	NA	CHMP6	156091	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr17	78844194	78844503	78844331	Y	C17orf56	NA	NA	NA	NA	NA	CHMP6	118895	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79018501	79018654	79018571	Y	BAIAP2	BAIAP2	NA	NA	NA	NA	BAIAP2	11553	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	79107096	79107396	79107264	Y	AATK	NA	NA	NA	NA	NA	AZI1	87403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79126074	79126501	79126440	Y	C17orf56	NA	NA	NA	NA	NA	AZI1	68298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79261712	79261892	79261868	Y	NA	SLC38A10	NA	NA	NA	NA	SLC38A10	5455	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79302809	79302914	79302847	Y	NA	SLC38A10	NA	NA	NA	NA	SLC38A10	35462	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79316253	79317268	79317090	Y	NA	SLC38A10	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,C17orf56,C17orf89,LINC00482,MIR3186,C17orf70,FSCN2,NPLOC4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	48906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79317785	79317948	79317891	Y	FAM195B,C17orf70,ACTG1,BAHCC1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	50438	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	79318144	79318304	79318226	Y	TMEM105,BAHCC1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	50797	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	79319325	79319648	79319507	Y	FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	51978	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79319812	79320225	79320116	Y	FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	52465	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	79360408	79361324	79361141	Y	ARHGDIA,ARHGDIA,TSPAN10	NA	NA	NA	NA	NA	SLC38A10	93061	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	79365060	79367456	79365203	Y	NA	NA	NA	NA	NA	NA	SLC38A10	97713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79368790	79369424	79369000	Y	NA	NA	NA	NA	NA	NA	SLC38A10	101443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79370754	79371569	79371407	Y	NA	NA	NA	NA	NA	NA	SLC38A10	103407	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	79399639	79399699	79399664	Y	GCGR,BAHCC1	NA	NA	NA	NA	NA	RP13-766D20.1	78390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79399752	79400128	79399940	Y	NPB	NA	NA	NA	NA	NA	RP13-766D20.1	77961	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79448388	79448678	79448571	Y	NPB,AATK,AZI1,BAHCC1	RP13-766D20.1,ACTG1	NA	NA	NA	NA	RP13-766D20.1	29411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79451287	79451558	79451462	Y	AATK,AZI1,BAHCC1	RP13-766D20.1,ACTG1	NA	NA	NA	NA	RP13-766D20.1	26531	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79546845	79547000	79546944	Y	PCYT2	C17orf70	NA	NA	NA	NA	C17orf70	27858	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	79979263	79979824	79979465	Y	NA	ASPSCR1,LRRC45,STRA13,RAC3,DCXR,GPS1,RFNG,DUS1L	NA	NA	NA	NA	LRRC45	85	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	80029941	80030069	80030002	Y	HEXDC	STRA13,RAC3,DCXR,GPS1,RFNG,DUS1L,FASN	NA	NA	NA	NA	DUS1L	8178	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80052713	80052821	80052782	Y	MRPL12,SLC25A10,GCGR,PCYT2,ASPSCR1,HEXDC,FOXK2,LRRC45,DCXR,DUS1L,FASN	GPS1,RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	1387	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	80056613	80056910	80056718	Y	C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN	RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	2405	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr17	80158664	80158910	80158860	Y	DUS1L,NARF,HEXDC,CD7,CCDC57	CCDC57,SLC16A3	FASN	K562	ChIA-PET	22265404	CCDC57	9796	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80188750	80189250	80189000	Y	NARF,CSNK1D,C17orf62,SLC16A3,SLC16A3,SLC16A3,SLC16A3,SLC16A3	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	SLC16A3	4477	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80214734	80215057	80214944	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	14550	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr17	80215337	80215590	80215470	Y	SIRT7,WDR45L,NARF,CSNK1D,CD7,C17orf62,C17orf62,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	14017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80216124	80216440	80216314	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	13167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80454894	80455238	80455175	Y	LRRC45,CCDC57,FN3KRP,NARF	C17orf62,NARF,FOXK2	NA	NA	NA	NA	FOXK2	20351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80494129	80494268	80494139	Y	NA	FOXK2	NA	NA	NA	NA	FOXK2	18540	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80592968	80593241	80593234	Y	NA	NA	NA	NA	NA	NA	RAB40B	61363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80655375	80655626	80655561	Y	RAB40B,FN3K	RAB40B,FN3KRP,FN3K	NA	NA	NA	NA	RAB40B	771	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80805995	80806457	80806155	Y	NA	NA	NA	NA	NA	NA	TBCD	98055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr17	80821746	80822299	80821973	Y	HEXDC,C17orf62,C17orf62,NARF	NA	NA	NA	NA	NA	TBCD	113806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	159482	159743	159659	Y	CETN1	USP14	NA	NA	NA	NA	USP14	3099	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	222573	222827	222703	Y	NA	THOC1	NA	NA	NA	NA	THOC1	43223	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	235900	236290	236249	Y	NA	THOC1	NA	NA	NA	NA	THOC1	29760	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr18	666183	666708	666437	Y	THOC1,YES1,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	9843	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr18	667633	668016	667981	Y	THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11293	CAGE	JHUCS-1	hg19	FANTOM5	3.99943731383639
chr18	668283	668526	668405	Y	THOC1,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	679559	679568	679564	Y	NA	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	23219	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	711356	711474	711397	Y	ENOSF1,ENOSF1	ENOSF1	NA	NA	NA	NA	ENOSF1	680	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	2549022	2549121	2549072	Y	NA	METTL4,NDC80	NA	NA	NA	NA	METTL4	20387	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	2797990	2798254	2798233	Y	NA	EMILIN2	NA	NA	NA	NA	EMILIN2	46774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	2851086	2851429	2851256	Y	EMILIN2	EMILIN2	LPIN2	IMR90	Hi-C	24141950	EMILIN2	6058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	2875334	2875786	2875693	Y	NA	EMILIN2	NA	NA	NA	NA	EMILIN2	30306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	4306944	4307316	4307247	Y	NA	NA	NA	NA	NA	NA	TGIF1	897338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	5629750	5630120	5629929	Y	NA	EPB41L3	NA	NA	NA	NA	EPB41L3	1051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	5895274	5895803	5895585	Y	TMEM200C	NA	L3MBTL4	IMR90	Hi-C	24141950	EPB41L3	266575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	8704447	8704767	8704559	Y	NA	NA	CCDC165,NDUFV2	IMR90	Hi-C	24141950	RAB12	97004	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9129786	9129925	9129855	Y	PPP4R1,ANKRD12,ANKRD12	NDUFV2,ANKRD12	ANKRD12	IMR90	Hi-C	24141950	ANKRD12	4301	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9138526	9138911	9138547	Y	ANKRD12,ANKRD12	NDUFV2,ANKRD12	NA	NA	NA	NA	ANKRD12	4300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9375216	9375438	9375327	Y	NA	TWSG1	NA	NA	NA	NA	TWSG1	42451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9548277	9548390	9548335	Y	ANKRD12,VAPA,RAB31,PPP4R1	NA	NA	NA	NA	NA	PPP4R1	64848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9604214	9604566	9604459	Y	NA	PPP4R1	NA	NA	NA	NA	PPP4R1	8672	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9612296	9612535	9612373	Y	NA	PPP4R1	NA	NA	NA	NA	PPP4R1	703	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9899069	9899359	9899167	Y	NA	VAPA	NA	NA	NA	NA	VAPA	12640	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	9914998	9915501	9915128	Y	PPP4R1,RAB31,VAPA	VAPA	NA	NA	NA	NA	VAPA	2999	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	10528233	10528593	10528264	Y	NA	NAPG	NA	NA	NA	NA	NAPG	4331	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	10543130	10543398	10543236	Y	NAPG	NAPG	NA	NA	NA	NA	NAPG	19228	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr18	10545349	10545498	10545424	Y	NA	NAPG	NA	NA	NA	NA	NAPG	21447	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	10708268	10708433	10708298	Y	NA	NA	NA	NA	NA	NA	NAPG	184366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	10726542	10726663	10726595	Y	NAPG	NA	NA	NA	NA	NA	NAPG	202640	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	11431991	11432229	11432112	Y	NA	NA	NA	NA	NA	NA	CHMP1B	417166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	12059774	12060081	12059918	Y	NA	NA	GNAL,IMPA2	IMR90	Hi-C	24141950	IMPA2	80750	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr18	12317654	12318000	12317871	Y	CHMP1B	TUBB6	NA	NA	NA	NA	TUBB6	11986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	12336380	12336603	12336512	Y	NA	TUBB6,AFG3L2	NA	NA	NA	NA	TUBB6	30712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	12347442	12347507	12347473	Y	CEP76,AFG3L2	TUBB6,AFG3L2	NA	NA	NA	NA	AFG3L2	27806	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	12679329	12679437	12679359	Y	NA	AP005482.1,SPIRE1,PSMG2,CEP76	NA	NA	NA	NA	CEP76	21339	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	12763760	12763785	12763774	Y	CEP192,C18orf1	NA	PTPN2	IMR90	Hi-C	24141950	CEP76	62984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	12837862	12838421	12838235	Y	PTPN2	NA	NA	NA	NA	NA	PTPN2	89221	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	12864190	12864369	12864245	Y	NA	NA	NA	NA	NA	NA	PTPN2	63273	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr18	12882540	12883190	12882840	Y	PTPN2	PTPN2	NA	NA	NA	NA	PTPN2	44452	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	13220671	13221282	13220939	Y	NA	NA	NA	NA	NA	NA	CEP192	231310	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	13381993	13382212	13382131	Y	RNMT,PTPN2,CEP192,C18orf1	NA	NA	NA	NA	NA	RNMT	342447	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	13594708	13595078	13594794	Y	C18orf1	NA	NA	NA	NA	NA	RNMT	129581	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	14111961	14112330	14112146	Y	NA	ZNF519	NA	NA	NA	NA	ZNF519	18159	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	18596588	18597119	18596879	Y	NA	NA	NA	NA	NA	NA	ROCK1	92693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	19279600	19279639	19279620	Y	NA	ABHD3,MIB1	NA	NA	NA	NA	ABHD3	3127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	19373794	19374099	19373861	Y	NA	NA	NA	NA	NA	NA	MIB1	90876	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	19397108	19397142	19397125	Y	NA	NA	NA	NA	NA	NA	MIB1	114190	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	20855209	20855599	20855401	Y	NA	NA	NA	NA	NA	NA	CABLES1	142681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	20913960	20914007	20913982	Y	NA	NA	NA	NA	NA	NA	TMEM241	101918	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	21091625	21091887	21091629	Y	C18orf8	C18orf8	NA	NA	NA	NA	C18orf8	10152	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	21153994	21154335	21154180	Y	NA	NPC1	NA	NA	NA	NA	NPC1	10527	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	21336252	21336608	21336275	Y	NA	NA	NA	NA	NA	NA	ANKRD29	95403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	21364980	21365182	21365090	Y	NA	NA	NA	NA	NA	NA	ANKRD29	124131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	21515812	21516136	21515930	Y	NA	NA	NA	NA	NA	NA	TTC39C	54601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	22879484	22879663	22879574	Y	NA	NA	NA	NA	NA	NA	ZNF521	50491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	23118847	23119081	23118964	Y	NA	NA	ZNF521	IMR90	Hi-C	24141950	ZNF521	188693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	23624852	23624978	23624915	Y	NA	SS18	NA	NA	NA	NA	SS18	44203	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	26567630	26568026	26567828	Y	NA	NA	NA	NA	NA	NA	CDH2	812220	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	28830890	28831119	28831005	Y	NA	NA	NA	NA	NA	NA	DSC2	150512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	29232383	29232901	29232639	Y	NA	B4GALT6	NA	NA	NA	NA	B4GALT6	30898	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	29542474	29542964	29542885	Y	RNF138	TRAPPC8	NA	NA	NA	NA	TRAPPC8	11375	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	32424641	32425032	32424811	Y	NA	NA	NA	NA	NA	NA	MAPRE2	129860	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	32674767	32675124	32674837	Y	NA	NA	NA	NA	NA	NA	MAPRE2	119875	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	32906658	32906918	32906743	Y	NA	ZSCAN30,ZNF271,ZNF24,ZNF396	NA	NA	NA	NA	ZNF24	16528	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	32925283	32925658	32925513	Y	MAPRE2,MAPRE2,MAPRE2,ZNF397,ZNF24	ZNF24,ZNF396	NA	NA	NA	NA	ZNF24	1837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	33057648	33057699	33057650	Y	MAPRE2,MAPRE2,ZNF24,ZNF396,INO80C	INO80C	NA	NA	NA	NA	INO80C	18256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	33073738	33073904	33073824	Y	NA	INO80C	NA	NA	NA	NA	INO80C	2051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	33577061	33577192	33577127	Y	NA	C18orf21	NA	NA	NA	NA	C18orf21	27015	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	33876540	33877026	33876703	Y	NA	FHOD3	NA	NA	NA	NA	FHOD3	863	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr18	33878609	33878753	33878681	Y	FHOD3	FHOD3	NA	NA	NA	NA	FHOD3	2932	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	34052267	34052344	34052306	Y	NA	NA	NA	NA	NA	NA	FHOD3	176590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	34406593	34406898	34406790	Y	NA	KIAA1328,TPGS2	NA	NA	NA	NA	KIAA1328	171	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	34813677	34814006	34813844	Y	NA	NA	NA	NA	NA	NA	CELF4	329994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	34993424	34993521	34993473	Y	NA	NA	NA	NA	NA	NA	CELF4	150479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	35066308	35066547	35066428	Y	CELF4	NA	NA	NA	NA	NA	CELF4	77453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	35138994	35139043	35139019	Y	CELF4	CELF4	NA	NA	NA	NA	CELF4	4957	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	35141706	35141990	35141782	Y	CELF4	CELF4	NA	NA	NA	NA	CELF4	2010	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	35574942	35575103	35575023	Y	NA	NA	NA	NA	NA	NA	CELF4	430942	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	36850987	36851328	36851158	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	62311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	37033966	37034182	37034037	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	120327	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	37101421	37101610	37101545	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	187782	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr18	39755452	39755827	39755639	Y	NA	NA	NA	NA	NA	NA	PIK3C3	222281	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	39768386	39768788	39768438	Y	NA	NA	NA	NA	NA	NA	PIK3C3	235215	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	39943709	39944054	39943882	Y	NA	NA	NA	NA	NA	NA	PIK3C3	410538	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	42305633	42305950	42305768	Y	SETBP1	SETBP1	NA	NA	NA	NA	SETBP1	47495	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	42419261	42419416	42419316	Y	NA	NA	NA	NA	NA	NA	SETBP1	161123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	42556167	42556181	42556174	Y	NA	NA	NA	NA	NA	NA	SETBP1	298029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	43210324	43210708	43210352	Y	NA	NA	NA	NA	NA	NA	EPG5	334532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	43542357	43542726	43542619	Y	PSTPIP2,C18orf25,EPG5	EPG5	NA	NA	NA	NA	EPG5	2514	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	44370223	44370563	44370393	Y	RNF165,PIAS2	NA	NA	NA	NA	NA	KATNAL2	124892	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	44372138	44372406	44372272	Y	RNF165,PIAS2	NA	NA	NA	NA	NA	KATNAL2	123049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	44392877	44393138	44393020	Y	NA	NA	NA	NA	NA	NA	KATNAL2	102317	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	44487034	44487390	44487355	Y	NA	KATNAL2,PIAS2	NA	NA	NA	NA	KATNAL2	8065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	44675442	44676177	44675810	Y	NA	HDHD2,IER3IP1	NA	NA	NA	NA	HDHD2	551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	45379355	45379691	45379492	Y	NA	NA	NA	NA	NA	NA	SMAD2	75824	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	45444466	45444807	45444662	Y	NA	SMAD2	NA	NA	NA	NA	SMAD2	10708	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	45534549	45534809	45534718	Y	NA	NA	NA	NA	NA	NA	SMAD2	79034	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	45687716	45687836	45687757	Y	NA	NA	NA	NA	NA	NA	SMAD2	232201	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46066779	46067121	46067052	Y	CTIF	CTIF	NA	NA	NA	NA	CTIF	3362	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46204089	46204193	46204141	Y	NA	NA	NA	NA	NA	NA	CTIF	140672	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46253142	46253362	46253168	Y	NA	NA	NA	NA	NA	NA	CTIF	189725	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	46324397	46324797	46324645	Y	NA	NA	NA	NA	NA	NA	CTIF	260980	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46349762	46350033	46349891	Y	NA	NA	NA	NA	NA	NA	CTIF	286345	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46449093	46449527	46449211	Y	SMAD7	NA	NA	NA	NA	NA	CTIF	385676	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46479420	46479772	46479694	Y	NA	NA	NA	NA	NA	NA	CTIF	416003	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	46754603	46754925	46754865	Y	DYM	NA	NA	NA	NA	NA	DYM	230792	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	47357197	47357543	47357370	Y	NA	ACAA2	NA	NA	NA	NA	ACAA2	18867	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	47620136	47620367	47620252	Y	NA	NA	NA	NA	NA	NA	MYO5B	99096	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	48462357	48462700	48462360	Y	ME2	ELAC1,SMAD4	NA	NA	NA	NA	ELAC1	29661	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	48541861	48541894	48541878	Y	NA	ELAC1,SMAD4	NA	NA	NA	NA	SMAD4	49451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	48720847	48721238	48721193	Y	NA	MEX3C	NA	NA	NA	NA	MEX3C	21436	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	50951176	50951493	50951334	Y	NA	NA	NA	NA	NA	NA	MBD2	797665	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	51699489	51699550	51699520	Y	NA	MBD2	NA	NA	NA	NA	MBD2	49608	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	51883843	51884006	51883925	Y	NA	NA	NA	NA	NA	NA	POLI	90069	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	52549117	52549282	52549200	Y	NA	NA	NA	NA	NA	NA	RAB27B	166026	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	53004994	53005474	53005290	Y	NA	NA	NA	NA	NA	NA	TCF4	324544	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	53041931	53042230	53042160	Y	NA	NA	NA	NA	NA	NA	TCF4	287788	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr18	53060777	53060994	53060923	Y	NA	NA	NA	NA	NA	NA	TCF4	269024	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	53072982	53073437	53073370	Y	NA	NA	NA	NA	NA	NA	TCF4	256581	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	53144810	53145149	53144924	Y	NA	NA	NA	NA	NA	NA	TCF4	184869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	53177007	53177126	53177058	Y	TCF4	NA	NA	NA	NA	NA	TCF4	152892	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	53180110	53180413	53180343	Y	NA	NA	NA	NA	NA	NA	TCF4	149605	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	53204965	53205096	53205075	Y	NA	NA	NA	NA	NA	NA	TCF4	124922	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	54672062	54672240	54672149	Y	NA	NA	NA	NA	NA	NA	TXNL1	355231	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	55095005	55095410	55095044	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	5507	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	55101559	55101949	55101758	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	55104670	55104954	55104730	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	3753	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr18	55105190	55105288	55105239	Y	ST8SIA3,ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	4273	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	55109141	55109496	55109318	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	8224	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr18	55609494	55609677	55609588	Y	NA	NA	ALPK2,NEDD4L,MALT1,ATP8B1	IMR90	Hi-C	24141950	ATP8B1	141161	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	56317461	56317625	56317529	Y	MALT1	ALPK2,MALT1	ALPK2,MALT1	IMR90	Hi-C	24141950	MALT1	18993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	56394566	56394962	56394680	Y	MALT1	NA	NA	NA	NA	NA	MALT1	57948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	56537923	56538093	56537956	Y	ZNF532	ZNF532	NA	NA	NA	NA	ZNF532	10091	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	59766177	59766307	59766242	Y	NA	NA	NA	NA	NA	NA	PIGN	86044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60193382	60194139	60194065	Y	KIAA1468,PHLPP1,ZCCHC2	ZCCHC2	NA	NA	NA	NA	ZCCHC2	5142	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr18	60445199	60445356	60445226	Y	NA	NA	NA	NA	NA	NA	PHLPP1	64527	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60822545	60823046	60822712	Y	NA	NA	NA	NA	NA	NA	BCL2	162315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60827467	60827631	60827548	Y	VPS4B,BCL2	NA	NA	NA	NA	NA	BCL2	157730	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60854025	60854354	60854177	Y	NA	NA	NA	NA	NA	NA	BCL2	131007	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60874386	60874946	60874584	Y	VPS4B,BCL2	NA	NA	NA	NA	NA	BCL2	110415	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60886280	60886709	60886627	Y	BCL2	NA	NA	NA	NA	NA	BCL2	98652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60929877	60930247	60930066	Y	SERPINB12	NA	NA	NA	NA	NA	BCL2	55114	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60973604	60973976	60973940	Y	NA	BCL2	NA	NA	NA	NA	BCL2	11385	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	60984165	60984609	60984519	Y	BCL2	BCL2,KDSR	NA	NA	NA	NA	BCL2	752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	61046049	61046189	61046119	Y	NA	KDSR,VPS4B	NA	NA	NA	NA	KDSR	13306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	61085026	61085396	61085214	Y	VPS4B	VPS4B	NA	NA	NA	NA	VPS4B	2320	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	61642248	61642613	61642430	Y	NA	SERPINB8	NA	NA	NA	NA	SERPINB8	7089	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	62655370	62655717	62655544	Y	NA	NA	NA	NA	NA	NA	SERPINB8	1020211	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	67682034	67682164	67682099	Y	NA	NA	NA	NA	NA	NA	RTTN	189017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	67957012	67957306	67957264	Y	NA	SOCS6	NA	NA	NA	NA	SOCS6	2875	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	72501282	72501640	72501447	Y	NA	NA	NA	NA	NA	NA	ZNF407	238176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	72676291	72676559	72676424	Y	ZNF407,TSHZ1	NA	NA	NA	NA	NA	ZADH2	242744	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	72919537	72919929	72919697	Y	ZADH2	ZADH2,TSHZ1	NA	NA	NA	NA	ZADH2	234	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	72919988	72920296	72920123	Y	ZADH2,TSHZ1	ZADH2,TSHZ1	NA	NA	NA	NA	TSHZ1	414	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	73628376	73628483	73628456	Y	NA	NA	NA	NA	NA	NA	ZNF516	576663	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	74194351	74194716	74194640	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	ZNF516	10430	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	74204839	74205357	74205296	Y	NA	RP11-17M16.1	NA	NA	NA	NA	ZNF516	0	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr18	74282938	74283058	74283002	Y	ZNF516	NA	NA	NA	NA	NA	RP11-17M16.1	77461	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	74556264	74556608	74556436	Y	NA	ZNF236	NA	NA	NA	NA	ZNF236	23701	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	74818309	74818676	74818510	Y	MBP	NA	NA	NA	NA	NA	ZNF236	285746	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	74819276	74819721	74819374	Y	MBP	NA	NA	NA	NA	NA	ZNF236	286713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	74830215	74830809	74830560	Y	MBP	NA	NA	NA	NA	NA	ZNF236	297652	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr18	74837664	74837983	74837939	Y	MBP	NA	NA	NA	NA	NA	ZNF236	305101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	76498631	76498821	76498726	Y	NA	NA	NA	NA	NA	NA	ATP9B	328464	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	76831132	76831674	76831321	Y	NFATC1,NFATC1,ATP9B	ATP9B	NA	NA	NA	NA	ATP9B	3847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	76884362	76884757	76884560	Y	NA	NA	NA	NA	NA	NA	ATP9B	57077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	76955177	76955415	76955295	Y	NA	NA	NA	NA	NA	NA	ATP9B	127892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	77016280	77016404	77016342	Y	NA	NA	NA	NA	NA	NA	NFATC1	137452	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	77153646	77154504	77153944	Y	ATP9B,NFATC1,NFATC1	NA	NA	NA	NA	NA	NFATC1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr18	78004258	78004625	78004566	Y	PARD6G	PARD6G	NA	NA	NA	NA	PARD6G	829	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	445179	445348	445264	Y	NA	SHC2,MADCAM1	NA	NA	NA	NA	SHC2	13648	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	481673	481793	481759	Y	PALM,HCN2,FGF22	SHC2,MADCAM1,TPGS1,CDC34	NA	NA	NA	NA	MADCAM1	5383	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	532930	533293	533259	Y	C19orf6,C19orf22,ARID3A	MADCAM1,TPGS1,CDC34,BSG	NA	NA	NA	NA	CDC34	3216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	888565	888780	888647	Y	SBNO2,HMHA1,CIRBP,GZMM,RNF126,C19orf6,ABCA7	MED16,R3HDM4,KISS1R,ARID3A	NA	NA	NA	NA	MED16	2438	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	996390	996745	996544	Y	HMHA1,CIRBP,GZMM,RNF126,C19orf6,ABCA7	WDR18,RNU6-2,CNN2,ABCA7	NA	NA	NA	NA	WDR18	15216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	1085284	1085426	1085350	Y	C19orf22,ARID3A,ABCA7,MIDN,CIRBP,HMHA1,SBNO2,SBNO2	ABCA7,HMHA1,POLR2E,GPX4	NA	NA	NA	NA	POLR2E	8172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	1140329	1140530	1140433	Y	NA	POLR2E,GPX4,SBNO2,STK11	NA	NA	NA	NA	SBNO2	31752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	1260732	1261171	1260912	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	CIRBP	3348	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	1266359	1266798	1266589	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	C19orf24	6228	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	1408607	1408695	1408655	Y	CNN2,POLR2E,GPX4,GPX4,UQCR11,SCAMP4,FAM108A1,ADAT3,RPS15	NDUFS7,GAMT,DAZAP1,RPS15,APC2	NA	NA	NA	NA	DAZAP1	3039	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	1408835	1409120	1409078	Y	NA	NDUFS7,GAMT,DAZAP1,RPS15,APC2	NA	NA	NA	NA	DAZAP1	3267	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	1410481	1410741	1410600	Y	NA	NDUFS7,GAMT,DAZAP1,RPS15,APC2	NA	NA	NA	NA	DAZAP1	4913	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	1445282	1445452	1445336	Y	C19orf26,EFNA2,MUM1,APC2	GAMT,DAZAP1,RPS15,APC2,C19orf25,PCSK4,REEP6	NA	NA	NA	NA	APC2	982	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	1651371	1651730	1651556	Y	NA	UQCR11,TCF3	NA	NA	NA	NA	TCF3	767	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	1855247	1855761	1855485	Y	SPPL2B,SF3A2,PLEKHJ1,LSM7,C19orf35,NDUFS7,C19orf25,TCF3,ATP8B3,ATP8B3,MOBKL2A,BTBD2,REXO1,SCAMP4,KLF16,CSNK1G2,ADAT3	ATP8B3,REXO1,KLF16,SCAMP4,ADAT3	NA	NA	NA	NA	KLF16	5806	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr19	2061356	2061737	2061654	Y	SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A	BTBD2,MKNK2,MOB3A	NA	NA	NA	NA	MKNK2	12113	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr19	2095281	2095723	2095416	Y	NA	MKNK2,MOB3A	NA	NA	NA	NA	MOB3A	609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	2165096	2165788	2165320	Y	REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	2632	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr19	2168890	2169464	2169082	Y	REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	6426	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	2561938	2562231	2562011	Y	DOT1L,GADD45B	NA	NA	NA	NA	NA	GADD45B	87818	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	2599036	2599584	2599134	Y	DOT1L,GADD45B	NA	NA	NA	NA	NA	DIRAS1	119832	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	2775891	2776162	2776129	Y	NA	SLC39A3,SGTA,THOP1,ZNF554	NA	NA	NA	NA	SGTA	5207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	3035530	3035851	3035686	Y	NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2	TLE2,AES	NA	NA	NA	NA	TLE2	9782	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	3165816	3165994	3165897	Y	GNA15,FZR1,S1PR4	NCLN	NA	NA	NA	NA	NCLN	17567	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	3231384	3231772	3231576	Y	ZNF555,ZNF77,TLE2,C19orf29,CELF5,CELF5	NCLN,CELF5	NA	NA	NA	NA	CELF5	8683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	3360183	3360356	3360294	Y	TLE2,TLE2,TLE2,AES,CELF5,CELF5,MATK,FZR1,NFIC	NFIC	NA	NA	NA	NA	NFIC	2622	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	3360896	3361804	3361247	Y	NA	NFIC	NA	NA	NA	NA	NFIC	3335	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	3367171	3367852	3367502	Y	NFIC,NFIC	NFIC	NA	NA	NA	NA	NFIC	9610	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	3387730	3388119	3388011	Y	NA	NFIC	NA	NA	NA	NA	NFIC	30169	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	3428769	3429112	3428821	Y	TLE2,NFIC	NA	NA	NA	NA	NA	DOHH	69826	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	3450938	3451227	3451079	Y	GNA15	DOHH	NA	NA	NA	NA	DOHH	47711	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	3458286	3458426	3458380	Y	NA	DOHH,FZR1	NA	NA	NA	NA	DOHH	40512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	4008398	4008778	4008498	Y	MATK,ZFR2,ATCAY	DAPK3,SNORD37,EEF2,PIAS4	NA	NA	NA	NA	PIAS4	2754	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	4053092	4053572	4053301	Y	CCDC94,ZBTB7A	PIAS4,ZBTB7A	NA	NA	NA	NA	ZBTB7A	11371	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	4067781	4068111	4067963	Y	SEMA6B,ATCAY,ZBTB7A	ZBTB7A	NA	NA	NA	NA	ZBTB7A	2838	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	4089074	4089290	4089084	Y	NA	ZBTB7A,MAP2K2	NA	NA	NA	NA	ZBTB7A	24131	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	4123124	4123351	4123249	Y	MATK,ZFR2,ATCAY	MAP2K2	NA	NA	NA	NA	MAP2K2	998	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	4456035	4456301	4456168	Y	NA	UBXN6,HDGFRP2	NA	NA	NA	NA	UBXN6	216	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	4456385	4456784	4456737	Y	UBXN6,UBXN6	UBXN6,HDGFRP2	NA	NA	NA	NA	UBXN6	566	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	4936813	4936840	4936828	Y	NA	UHRF1,KDM4B	NA	NA	NA	NA	KDM4B	30285	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	5338459	5338816	5338637	Y	PTPRS	NA	NA	NA	NA	NA	PTPRS	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	5505612	5505767	5505690	Y	PTPRS,NRTN	NA	PTPRS,ZNRF4,PLAC2	IMR90	Hi-C	24141950	SAFB	115279	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	5536566	5536826	5536635	Y	NA	NA	PTPRS,ZNRF4,PLAC2	IMR90	Hi-C	24141950	SAFB	84220	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	5804044	5804378	5804211	Y	NA	DUS3L	NDUFA11,DUS3L,NRTN,LONP1,CATSPERD,RANBP3,LOC100128568,FUT6,VMAC,PRR22,FUT3,RFX2,FUT5,CAPS	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	DUS3L	14795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	5829202	5829624	5829506	Y	NA	DUS3L	NA	NA	NA	NA	DUS3L	39953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	6056849	6057757	6057360	Y	DENND1C,SAFB2,SAFB,VMAC,RFX2	NA	NA	NA	NA	NA	RANBP3	80696	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	6060958	6061480	6061122	Y	RFX2	NA	NA	NA	NA	NA	RANBP3	84805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	6066698	6067208	6066827	Y	SLC25A41,TMEM146,PRR22,DUS3L,RFX2,ACSBG2	NA	NA	NA	NA	NA	RANBP3	90545	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	6105811	6106211	6106011	Y	NA	NA	NA	NA	NA	NA	RFX2	91372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	6108978	6109271	6109224	Y	NA	NA	NA	NA	NA	NA	RFX2	88312	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	6189136	6189412	6189274	Y	NA	RFX2	NA	NA	NA	NA	RFX2	8171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	6228782	6229121	6229035	Y	NA	RFX2,MLLT1	NA	NA	NA	NA	RFX2	31199	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	7410848	7411007	7410905	Y	ZNF557,FCER2,ARHGEF18	ARHGEF18	ZNF557,INSR	IMR90	Hi-C	24141950	ARHGEF18	46992	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	7427436	7427895	7427614	Y	ZNF557,XAB2,STXBP2,PNPLA6,LOC100131801,ARHGEF18	ARHGEF18	INSR,ARHGEF18,PNPLA6,MCOLN1,ZNF358,C19orf45,CD209,CLEC4G	IMR90	Hi-C	24141950	ARHGEF18	30104	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	7525376	7525563	7525475	Y	NA	PEX11G	NA	NA	NA	NA	PEX11G	34772	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	7756040	7757119	7756175	Y	ARHGEF18,FBN3,MAP2K7,FLJ22184,EVI5L,FCER2,FCER2	TRAPPC5	NA	NA	NA	NA	TRAPPC5	12311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	7907381	7907869	7907475	Y	PNPLA6,PNPLA6,KIAA1543,FBN3,LASS4,EVI5L,FLJ22184,CTXN1	EVI5L,LRRC8E	NA	NA	NA	NA	EVI5L	14262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	8115456	8115774	8115631	Y	PRAM1,STXBP2,C19orf59	ELAVL1	NA	NA	NA	NA	ELAVL1	46913	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	9402141	9402360	9402251	Y	NA	ZNF559	NA	NA	NA	NA	ZNF559	30088	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	9747838	9748099	9747855	Y	ZNF559,ZNF559,ZNF846	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF561	17763	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	9748883	9749171	9749027	Y	OR7D4,OR7E24,ZNF559,ZNF559,ZNF559-ZNF177,ZNF177,ZNF177,ZNF426,ZNF846,OLFM2,ZNF562	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF561	18808	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	9757386	9757713	9757550	Y	NA	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	26063	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	9758216	9758505	9758322	Y	ZNF559,ZNF559,ZNF559-ZNF177,ZNF846	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	25271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	9777343	9777681	9777659	Y	ZNF559,ZNF559,ZNF177,ZNF846	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	6095	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	9783821	9783976	9783959	Y	NA	ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	45	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	10304383	10304612	10304534	Y	TYK2,KRI1,ILF3	S1PR2,DNMT1	PPAN-P2RY11,EIF3G	MCF7	ChIA-PET	22265404	S1PR2	35336	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	10515339	10515636	10515481	Y	PDE4A,PDE4A	TYK2,MIR1181	NA	NA	NA	NA	MIR1181	3125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	10678483	10678588	10678537	Y	TYK2,KRI1	ATG4D,KRI1,CDKN2D,SLC44A2	NA	NA	NA	NA	CDKN2D	748	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	10714716	10715205	10715003	Y	ICAM1,ICAM3,TYK2,PDE4A,PDE4A,DNM2,C19orf38,S1PR5,S1PR5,ATG4D,CDKN2D,CDKN2D,SLC44A2	KRI1,CDKN2D,SLC44A2,ILF3	NA	NA	NA	NA	SLC44A2	3583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	10728527	10728590	10728559	Y	NA	SLC44A2,ILF3	NA	NA	NA	NA	SLC44A2	17394	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	10766466	10766790	10766534	Y	NA	ILF3,QTRT1	NA	NA	NA	NA	ILF3	3529	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	10865897	10866291	10865968	Y	ICAM1,ICAM3,TYK2,PDE4A,PDE4A,S1PR5,S1PR5,ATG4D,CDKN2D,CDKN2D,SLC44A2,C19orf38,DNM2	DNM2	NA	NA	NA	NA	DNM2	39142	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	10987245	10987998	10987563	Y	NA	TMED1,CARM1,YIPF2,C19orf52	NA	NA	NA	NA	CARM1	7056	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	11044199	11044446	11044323	Y	NA	YIPF2,C19orf52,SMARCA4	NA	NA	NA	NA	C19orf52	6790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	11202212	11202837	11202668	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	4174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	11248443	11248964	11248826	Y	NA	SPC24	NA	NA	NA	NA	SPC24	15520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	11484314	11484469	11484411	Y	ZNF439,ZNF653,ZNF627,ZNF491,ZNF441,ELAVL3,CCDC151,SMARCA4,SMARCA4	CCDC159,RAB3D,TMEM205,SWSAP1,EPOR,RGL3	NA	NA	NA	NA	SWSAP1	953	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	11592904	11593323	11593025	Y	ZNF491,ZNF441,CCDC151,ELAVL3,ZNF653	PRKCSH,CCDC151,ZNF653,CTC-398G3.2,ECSIT	NA	NA	NA	NA	ZNF653	21415	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	11804467	11804940	11804795	Y	ZNF878,ZNF823,ZNF491	HNRNPA1P10,ZNF823	NA	NA	NA	NA	HNRNPA1P10	28622	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	11925678	11926080	11925867	Y	NA	ZNF441,ZNF491,ZNF440,ZNF439	NA	NA	NA	NA	ZNF440	2579	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	12245844	12245929	12245887	Y	NA	ZNF788,ZNF20,CTC-359D24.3,ZNF625,ZNF136	NA	NA	NA	NA	ZNF20	3293	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	12404552	12404928	12404719	Y	ZNF791,ZNF564,ZNF490,WDR83,JUNB,ZNF700,ZNF763,ZNF136,ZNF799,ZNF443,ZNF563,ZNF44	CTD-2666L21.3,ZNF44,ZNF563	NA	NA	NA	NA	ZNF44	850	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	12844296	12844608	12844453	Y	NA	FBXW9,SNORD41,TNPO2,C19orf43,ASNA1	NA	NA	NA	NA	C19orf43	707	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	12888910	12889352	12889266	Y	NA	C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A	NA	NA	NA	NA	JUNB	10958	CAGE	JHUCS-1	hg19	FANTOM5	2.3330050997379
chr19	12892961	12894040	12893343	Y	ZNF44,ZNF564,ZNF791,MAN2B1,C19orf43,DNASE2,JUNB	C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A,MAST1	NA	NA	NA	NA	JUNB	6270	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	12894545	12895330	12894818	Y	ZNF44,ZNF791,MAN2B1,C19orf43,DNASE2,JUNB	ASNA1,JUNB,PRDX2,RNASEH2A,MAST1,RTBDN	NA	NA	NA	NA	JUNB	4980	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	12896372	12896781	12896659	Y	ZNF44,ZNF564,ZNF490,ZNF791,MAN2B1,C19orf43,STX10,LYL1,DNASE2,JUNB	JUNB,PRDX2,RNASEH2A,MAST1,RTBDN	NA	NA	NA	NA	JUNB	3529	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	12899457	12901460	12900777	Y	NA	PRDX2,RNASEH2A,MAST1,RTBDN	NA	NA	NA	NA	JUNB	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	12901644	12901726	12901699	Y	NA	JUNB,PRDX2,RNASEH2A,MAST1,RTBDN	NA	NA	NA	NA	JUNB	1334	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13048278	13048689	13048364	Y	MAN2B1	GCDH,SYCE2,FARSA,CALR,RAD23A,GADD45GIP1	NA	NA	NA	NA	CALR	886	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	13094405	13094796	13094616	Y	ZNF709,TNPO2,TNPO2,MAST1,DAND5	CALR,RAD23A,GADD45GIP1,NFIX	NA	NA	NA	NA	NFIX	9626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13129050	13129163	13129107	Y	MAST1,NFIX,CACNA1A	NFIX	NA	NA	NA	NA	NFIX	24628	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13133010	13133371	13133241	Y	FBXW9,NFIX	NFIX	NA	NA	NA	NA	NFIX	28588	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13143095	13143350	13143204	Y	WDR83,FBXW9,TNPO2,TNPO2	NFIX	NA	NA	NA	NA	NFIX	38673	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13188264	13188490	13188383	Y	ZNF490,PRDX2,KLF1,STX10,LYL1	TRMT1,NACC1	NA	NA	NA	NA	TRMT1	37891	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13262107	13262928	13262695	Y	MAN2B1,C19orf43,JUNB	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	2878	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr19	13273540	13274187	13273840	Y	MAN2B1,C19orf43,JUNB,LYL1	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	14311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13274586	13275096	13274696	Y	GADD45GIP1,NACC1	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	15357	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13944151	13944331	13944193	Y	CCDC130,RFX1,DCAF15,ZSWIM4	ZSWIM4	NA	NA	NA	NA	ZSWIM4	39877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13944359	13944683	13944571	Y	CCDC130,RFX1,PRKACA,IL27RA,DCAF15	ZSWIM4	NA	NA	NA	NA	ZSWIM4	40085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	13975574	13976059	13975671	Y	CACNA1A,LPHN1,CC2D1A,C19orf57	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	38955	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	13976745	13977653	13977105	Y	CACNA1A,RFX1,LPHN1,ZSWIM4,C19orf57	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	37361	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	13995440	13995781	13995611	Y	NA	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	19233	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	14241315	14241555	14241521	Y	NA	SAMD1,PRKACA,ASF1B	NA	NA	NA	NA	ASF1B	4213	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	14274504	14274771	14274661	Y	C19orf57,RFX1,LPHN1	PRKACA,ASF1B,LPHN1	NA	NA	NA	NA	ASF1B	28736	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	14473667	14474081	14473883	Y	ZNF333,EMR2,DCAF15,RFX1,PKN1,CD97	CD97	CD97,DDX39A	K562	ChIA-PET	22265404	CD97	15232	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	14528800	14529217	14529142	Y	ZNF333,EMR2,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,CD97,DDX39A	CD97,DDX39A,PKN1	NA	NA	NA	NA	DDX39A	608	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	14636614	14636887	14636775	Y	OR7C2	GIPC1,TECR,DNAJB1,NDUFB7	NA	NA	NA	NA	DNAJB1	1695	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	14732511	14733275	14733016	Y	SYDE1	NA	NA	NA	NA	NA	NDUFB7	51637	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	15283162	15283418	15283290	Y	NA	ILVBL,NOTCH3	NA	NA	NA	NA	NOTCH3	26374	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	15310768	15311119	15311001	Y	NA	NOTCH3	NA	NA	NA	NA	NOTCH3	976	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	15333627	15333747	15333631	Y	SYDE1,NOTCH3	NOTCH3	NA	NA	NA	NA	NOTCH3	23835	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	15334094	15334476	15334286	Y	SLC1A6,WIZ	NOTCH3	NA	NA	NA	NA	NOTCH3	24302	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	16188924	16190024	16189835	Y	TPM4	TPM4,RAB8A	NA	NA	NA	NA	TPM4	13093	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr19	16205409	16205807	16205414	Y	EPS15L1,RAB8A,HSH2D	TPM4,RAB8A	NA	NA	NA	NA	RAB8A	14632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	16229373	16229857	16229589	Y	NA	RAB8A	NA	NA	NA	NA	RAB8A	8934	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	16462018	16462188	16462137	Y	CIB3	KLF2	NA	NA	NA	NA	KLF2	28390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	16704980	16705245	16705094	Y	KLF2,MED26	SLC35E1,MED26	NA	NA	NA	NA	SLC35E1	23787	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17124642	17124654	17124646	Y	NA	CPAMD8	NA	NA	NA	NA	CPAMD8	10971	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17127706	17127720	17127713	Y	NA	CPAMD8	NA	NA	NA	NA	CPAMD8	7905	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17131732	17132248	17131919	Y	NA	CPAMD8	NA	NA	NA	NA	CPAMD8	3377	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17176287	17176664	17176476	Y	MYO9B	CPAMD8,HAUS8,MYO9B	NA	NA	NA	NA	HAUS8	7771	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17200566	17201240	17200825	Y	MED26,FAM129C,HAUS8,MYO9B	HAUS8,MYO9B	NA	NA	NA	NA	MYO9B	15975	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17307223	17307519	17307336	Y	MYO9B	USE1,OCEL1,NR2F6	NA	NA	NA	NA	USE1	16636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17371801	17372164	17371849	Y	NXNL1,GTPBP3	USE1,OCEL1,NR2F6,BABAM1,ANKLE1,MRPL34,DDA1,ABHD8	NR2F6	K562	ChIA-PET	22265404	BABAM1	3995	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	17791017	17791370	17791235	Y	MAP1S,IFI30,ARRDC2,ARRDC2	UNC13A,MAP1S	NA	NA	NA	NA	UNC13A	6031	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	18059806	18059879	18059816	Y	UNC13A,KCNN1	CCDC124,KCNN1	NA	NA	NA	NA	KCNN1	223	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	18211545	18211814	18211678	Y	NA	MAST3	NA	NA	NA	NA	MAST3	4942	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	18497624	18497977	18497708	Y	PDE4C,GDF15	PGPEP1,GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	GDF15	14083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	18527701	18528040	18527800	Y	KCNN1,ARRDC2,ARRDC2,IL12RB1,IFI30,JUND,PGPEP1,LRRC25,SSBP4	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	27	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	18528263	18528792	18528577	Y	UPF1,ARRDC2,ARRDC2,IFI30,PGPEP1,UBA52,C19orf60,LRRC25,SSBP4	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	589	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	18588665	18588964	18588926	Y	NA	ISYNA1,ELL	NA	NA	NA	NA	ISYNA1	41554	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	18601625	18601886	18601730	Y	ARRDC2,IL12RB1,JUND,KLHL26,SSBP4	ELL	NA	NA	NA	NA	ELL	29051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	19143307	19143510	19143378	Y	DDX49,SUGP1,NR2C2AP,SUGP2,ARMC6	ARMC6,SUGP2,SLC25A42	NA	NA	NA	NA	SUGP2	475	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr19	20128543	20128860	20128736	Y	NA	ZNF682	NA	NA	NA	NA	ZNF682	19455	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	20162886	20163252	20163139	Y	ZNF506,ZNF253,ZNF682,ZNF682	ZNF682,ZNF90,AC006539.2	ZNF682,LOC284440	MCF7	ChIA-PET	22265404	ZNF682	14571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	20337633	20337845	20337749	Y	ZNF93,ZNF682,ZNF682,ZNF90,ZNF486	NA	NA	NA	NA	NA	CTC-260E6.2	104385	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	23500893	23501028	23500961	Y	NA	NA	NA	NA	NA	NA	ZNF724P	69701	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	23530488	23530791	23530760	Y	NA	ZNF91	NA	NA	NA	NA	ZNF91	45571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	24216985	24217321	24217111	Y	ZNF254	ZNF254	NA	NA	NA	NA	ZNF254	2709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	27732067	27732764	27732500	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1969684	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	28234447	28234748	28234598	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1467700	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	28239770	28239799	28239785	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1462649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	28241688	28242434	28242171	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1460014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	28265126	28266155	28265940	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1436293	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	28270762	28271411	28271062	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1431037	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	28518502	28518514	28518508	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1183934	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	29196051	29196136	29196055	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	506312	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	30336581	30336824	30336781	Y	C19orf2,C19orf2	CCNE1	NA	NA	NA	NA	CCNE1	35776	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	30447917	30448294	30448014	Y	NA	URI1	NA	NA	NA	NA	URI1	35366	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	30718140	30718340	30718240	Y	NA	ZNF536	NA	NA	NA	NA	ZNF536	943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	30864626	30864772	30864676	Y	ZNF536	NA	NA	NA	NA	NA	ZNF536	147429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	30940722	30941004	30940861	Y	NA	NA	NA	NA	NA	NA	ZNF536	223525	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	31041576	31041942	31041745	Y	NA	NA	NA	NA	NA	NA	ZNF536	324379	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	31415761	31415844	31415821	Y	NA	NA	NA	NA	NA	NA	TSHZ3	422609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	31841682	31842327	31842237	Y	NA	TSHZ3	NA	NA	NA	NA	TSHZ3	3229	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	32863977	32864267	32864121	Y	NA	ZNF507,DPY19L3	NA	NA	NA	NA	ZNF507	29477	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	33996867	33997517	33996997	Y	LRP3	PEPD	NA	NA	NA	NA	PEPD	13183	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	34267387	34267630	34267509	Y	NA	KCTD15	NA	NA	NA	NA	KCTD15	17208	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	34301645	34301872	34301668	Y	NA	KCTD15	NA	NA	NA	NA	KCTD15	16807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	34396925	34397389	34397012	Y	NA	NA	KCTD15	MCF7	ChIA-PET	22265404	KCTD15	112087	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	34625713	34625998	34625854	Y	PDCD2L	LSM14A	CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD	IMR90	Hi-C	24141950	LSM14A	35411	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	34850085	34850642	34850351	Y	ZNF599,ZNF302,ZNF181	GPI,PDCD2L	NA	NA	NA	NA	GPI	1700	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	34874880	34875495	34875019	Y	NA	GPI,PDCD2L,UBA2	NA	NA	NA	NA	PDCD2L	17794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	35763394	35763606	35763496	Y	U2AF1L4,MLL4,IGFLR1,USF2	LSR,USF2	NA	NA	NA	NA	USF2	5513	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	36193251	36193562	36193412	Y	USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33	IGFLR1,PSENEN,U2AF1L4,LIN37	MLL4,ZBTB32	K562	ChIA-PET	22265404	IGFLR1	37792	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	36373129	36373360	36373222	Y	NA	KIRREL2,APLP1,NFKBID	NA	NA	NA	NA	APLP1	16328	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	36402185	36402479	36402315	Y	IGFLR1	APLP1,NFKBID,LRFN3	NA	NA	NA	NA	NFKBID	10980	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	36519340	36519516	36519376	Y	ZNF565	SDHAF1,ALKBH6,THAP8,WDR62	NA	NA	NA	NA	ALKBH6	16199	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	36720266	36720641	36720459	Y	ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF382,ZNF260,ZFP14,ZNF565,ZNF565	ZNF146,ZNF565	NA	NA	NA	NA	ZNF565	14518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	36748454	36748637	36748519	Y	ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF461,ZNF382,ZFP82,ZFP14,ZNF565,ZNF565	ZNF146,ZNF565	NA	NA	NA	NA	ZNF565	13295	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr19	36891925	36892272	36892205	Y	NA	ZFP14,ZFP82	NA	NA	NA	NA	ZFP82	15286	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	37246589	37246720	37246657	Y	NA	ZNF850	NA	NA	NA	NA	ZNF850	15007	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	37322216	37322466	37322299	Y	ZFP14,ZFP82,ZNF566,ZNF566,ZNF529,ZNF529,ZNF382,ZNF461,ZNF829,ZNF829,ZNF585B,ZNF568,ZNF420,ZNF383,ZNF790,ZNF345,ZNF345,ZNF345	ZNF345,ZNF790	NA	NA	NA	NA	ZNF345	16797	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	37408041	37408149	37408081	Y	ZNF527,HKR1,ZFP82,ZNF566,ZNF566,ZNF529,ZNF382,ZNF461,ZNF790,ZNF345,ZNF345,ZNF345,ZNF585B,ZNF420,ZNF383,ZNF829,ZNF568	ZNF829,ZNF568	NA	NA	NA	NA	ZNF568	2810	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	37424676	37424848	37424761	Y	ZNF527,HKR1,ZNF566,ZNF566,ZNF260,ZNF529,ZNF461,ZNF790,ZNF345,ZNF345,ZNF345,ZNF585B,ZNF420,ZNF383,ZNF829,ZNF829,ZNF568	ZNF829,ZNF568	NA	NA	NA	NA	ZNF568	19445	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	37830170	37830469	37830239	Y	NA	HKR1,ZNF527	ZNF527	IMR90	Hi-C	24141950	HKR1	28431	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	37923813	37923829	37923821	Y	NA	ZNF570,ZNF569	NA	NA	NA	NA	ZNF570	32658	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	37942009	37942313	37942161	Y	ZNF420,ZNF585B,ZNF527,ZNF781,ZNF607,ZNF607,ZNF573,ZNF571,ZNF540,ZNF540,ZFP30,ZNF793,ZNF570,ZNF569	ZNF570,ZNF569	NA	NA	NA	NA	ZNF570	14174	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	37953316	37953327	37953324	Y	NA	ZNF570,ZNF569,ZNF793	NA	NA	NA	NA	ZNF570	3160	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr19	38433320	38433698	38433507	Y	ZNF569,ZNF570,ZNF793,ZFP30,ZNF607,ZNF607,ZNF573,DPF1,DPF1	SIPA1L3	NA	NA	NA	NA	SIPA1L3	37452	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	38470537	38470671	38470619	Y	NA	NA	NA	NA	NA	NA	SIPA1L3	74669	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	38480533	38480757	38480643	Y	NA	NA	NA	NA	NA	NA	SIPA1L3	84665	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	38493976	38494435	38494152	Y	YIF1B,YIF1B,SPRED3,PSMD8,SIPA1L3	NA	NA	NA	NA	NA	SIPA1L3	98108	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	38719187	38719304	38719247	Y	ZNF573,DPF1,PPP1R14A,DPF1	DPF1,PPP1R14A	NA	NA	NA	NA	DPF1	833	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	39148533	39148920	39148613	Y	C19orf33,FAM98C,PAPL,ACTN4	EIF3K,ACTN4	NA	NA	NA	NA	ACTN4	12244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	39177340	39177518	39177421	Y	RASGRP4,NFKBIB,HNRNPL	ACTN4	NA	NA	NA	NA	ACTN4	41051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	39621407	39621638	39621523	Y	NA	PAK4	NA	NA	NA	NA	PAK4	6997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	39810585	39810976	39810672	Y	CLC,LRFN1	SAMD4B	NA	NA	NA	NA	SAMD4B	20060	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	39894353	39894945	39894613	Y	GMFG,SAMD4B,PAF1,MED29,ZFP36,SUPT5H,SUPT5H,PLEKHG2	PAF1,MED29,ZFP36,PLEKHG2,RPS16,SUPT5H	NA	NA	NA	NA	ZFP36	508	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	40315090	40315548	40315357	Y	NA	DYRK1B,FBL	NA	NA	NA	NA	DYRK1B	7293	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	40447509	40447978	40447857	Y	SERTAD1,ZNF546,FCGBP	PSMC4,ZNF546	LEUTX	IMR90	Hi-C	24141950	CTC-471F3.4	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	40543471	40543758	40543711	Y	SPTBN4,ZNF546,ZNF780B	ZNF780B	NA	NA	NA	NA	ZNF780B	16358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	41037324	41037469	41037389	Y	ZNF780B,MAP3K10,TTC9B,SPTBN4,SPTBN4	SHKBP1	NA	NA	NA	NA	SHKBP1	43288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	41109606	41110134	41110046	Y	SERTAD1,ITPKC,EGLN2,EGLN2,C19orf54,ADCK4,SHKBP1	SHKBP1	NA	NA	NA	NA	SHKBP1	28849	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	41169097	41169273	41169245	Y	NA	NUMBL	NA	NA	NA	NA	NUMBL	25604	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	41267029	41267391	41267210	Y	NA	ITPKC,ADCK4,SNRPA,C19orf54,MIA,RAB4B,EGLN2	NA	NA	NA	NA	MIA	8162	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	41771602	41771660	41771636	Y	CEACAM4,CEACAM21,RAB4B,EGLN2,EGLN2,TMEM91,TMEM91,TGFB1,B9D2,HNRNPUL1	AXL,HNRNPUL1,CCDC97	NA	NA	NA	NA	HNRNPUL1	5201	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	41795419	41795640	41795447	Y	CYP2A13,B9D2,HNRNPUL1	HNRNPUL1,CCDC97	NA	NA	NA	NA	CCDC97	18454	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	41814398	41814719	41814610	Y	HNRNPUL1,TMEM91,TGFB1,CCDC97,B9D2	HNRNPUL1,CCDC97,TMEM91,TGFB1	NA	NA	NA	NA	CCDC97	304	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	41827649	41828097	41827915	Y	HNRNPUL1,TGFB1,B9D2	CCDC97,TMEM91,TGFB1,B9D2	NA	NA	NA	NA	CCDC97	13555	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42028325	42028365	42028354	Y	NA	NA	CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21	IMR90	Hi-C	24141950	ATP5SL	83703	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	42379575	42379860	42379642	Y	ZNF574,DEDD2,CD79A,ARHGEF1,ARHGEF1	RPS19,ARHGEF1	NA	NA	NA	NA	ARHGEF1	5368	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	42419916	42420316	42420067	Y	ZNF574,GRIK5,DEDD2,ARHGEF1,ARHGEF1	ARHGEF1,RABAC1	NA	NA	NA	NA	ARHGEF1	34688	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42429105	42429824	42429205	Y	DEDD2,ARHGEF1,ARHGEF1	ARHGEF1,RABAC1	NA	NA	NA	NA	RABAC1	31718	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	42432096	42432209	42432128	Y	NA	ARHGEF1,RABAC1	NA	NA	NA	NA	RABAC1	29333	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42444277	42444712	42444407	Y	POU2F2,CD79A,ARHGEF1,ARHGEF1	RABAC1	NA	NA	NA	NA	RABAC1	16830	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	42444727	42445027	42444981	Y	NA	RABAC1	NA	NA	NA	NA	RABAC1	16515	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	42493914	42494230	42494205	Y	TMEM145,MEGF8,GRIK5,ATP1A3	RABAC1,ATP1A3	NA	NA	NA	NA	ATP1A3	5419	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr19	42514619	42514744	42514681	Y	ATP1A3	ATP1A3	NA	NA	NA	NA	ATP1A3	14970	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	42606774	42607144	42606983	Y	NA	ZNF574	NA	NA	NA	NA	ZNF574	36145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42693167	42693275	42693248	Y	NA	DEDD2,ZNF526	NA	NA	NA	NA	DEDD2	29017	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	42710307	42710321	42710316	Y	NA	DEDD2,ZNF526,GSK3A,ERF	NA	NA	NA	NA	DEDD2	11971	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42722677	42722859	42722787	Y	NA	DEDD2,ZNF526,GSK3A,ERF,CIC	NA	NA	NA	NA	ZNF526	254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42772295	42772768	42772477	Y	NA	ZNF526,GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	1606	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	42772804	42773312	42773020	Y	CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	2115	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42775992	42776735	42776352	Y	NA	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	NA	NA	NA	NA	CIC	5303	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	42784527	42784991	42784716	Y	ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13838	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr19	42789863	42790090	42789919	Y	CEACAM8,CEACAM3,ARHGEF1,DEDD2,CIC	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	PRR19	14160	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42902919	42903213	42903066	Y	TMEM145	CNFN	CNFN	MCF7	ChIA-PET	22265404	CNFN	10480	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	42913594	42913985	42913852	Y	NA	CNFN	NA	NA	NA	NA	CNFN	21155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	44124638	44124922	44124781	Y	CADM4	XRCC1,IRGQ,ZNF576,SRRM5,ZNF428,CADM4,PLAUR	NA	NA	NA	NA	ZNF428	2612	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	44196948	44197341	44197160	Y	NA	PLAUR	IRGC,SMG9,KCNN4,LYPD5,PLAUR	IMR90	Hi-C	24141950	PLAUR	24249	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	44711538	44711905	44711597	Y	NA	ZNF226,ZNF227,ZNF233	NA	NA	NA	NA	ZNF227	1838	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	44749585	44749846	44749685	Y	LYPD5,ZNF221,ZNF223,ZNF284,ZNF224,ZNF234,ZNF226,ZNF226,ZNF226,ZNF285,ZNF229,ZFP112,ZNF227,ZNF235,ZNF233,ZNF233	ZNF227,ZNF233	NA	NA	NA	NA	ZNF233	2472	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	44773096	44773391	44773244	Y	LYPD5,ZNF221,ZNF284,ZNF224,ZNF234,ZNF226,ZNF226,ZNF226,ZNF285,ZFP112,ZNF227,ZNF233,ZNF233,ZNF235	ZNF233,ZNF235	NA	NA	NA	NA	ZNF233	20778	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	44780646	44780756	44780701	Y	NA	ZNF233,ZNF235	NA	NA	NA	NA	ZNF235	26443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	44824668	44825027	44825022	Y	NA	ZNF235	NA	NA	NA	NA	ZNF235	17469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	44825986	44826083	44826035	Y	ZNF221,ZNF284,ZNF285,ZNF233,ZNF233	ZNF235	NA	NA	NA	NA	ZNF235	18787	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	45224647	45224919	45224783	Y	CEACAM16,CLASRP	BCL3	NA	NA	NA	NA	BCL3	24043	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	45350775	45351289	45350997	Y	BCL3,PVRL2,RELB	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	3343	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	45352107	45352544	45352311	Y	NA	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	4675	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	45393623	45393866	45393750	Y	ZNF285,ZNF180,GEMIN7,GEMIN7,CLASRP,TOMM40	PVRL2,TOMM40,APOE	NA	NA	NA	NA	TOMM40	1797	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr19	45755637	45756189	45755812	Y	RELB,CLASRP,VASP	NA	NA	NA	NA	NA	BLOC1S3	75634	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	45943163	45943490	45943268	Y	GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1	ERCC1,PPM1N,RTN2,VASP,FOSB,CD3EAP,PPP1R13L	K562,MCF7	ChIA-PET	22265404	FOSB	25763	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	45946690	45947113	45946759	Y	GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1	ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2	K562,MCF7	ChIA-PET	22265404	FOSB	22140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	45953764	45954783	45954182	Y	NA	CD3EAP,PPP1R13L,FOSB,ERCC1,RTN2	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	14470	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr19	46385401	46385465	46385433	Y	NA	SYMPK,IRF2BP1,MYPOP	NA	NA	NA	NA	IRF2BP1	1911	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	46877153	46877367	46877269	Y	NA	PPP5C	NA	NA	NA	NA	PPP5C	28902	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	47059268	47059423	47059384	Y	NA	CALM3	NA	NA	NA	NA	CALM3	42908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	47269374	47269772	47269575	Y	LOC100506012,SLC1A5,SLC1A5	FKRP,STRN4,SLC1A5	NA	NA	NA	NA	SLC1A5	20079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	47363167	47364689	47363471	Y	PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35	AP2S1	SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1	MCF7,K562	ChIA-PET	22265404	AP2S1	10918	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr19	47448240	47448462	47448420	Y	PNMAL1,PNMAL2,DACT3,ARHGAP35,MEIS3,NPAS1	NA	NA	NA	NA	NA	AP2S1	95991	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr19	47600896	47601033	47600983	Y	NA	SAE1,ZC3H4	NA	NA	NA	NA	SAE1	13498	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	47729030	47729228	47729064	Y	NA	BBC3,CCDC9,PRR24	NA	NA	NA	NA	BBC3	4795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	47746329	47746738	47746506	Y	SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24	BBC3,CCDC9,PRR24	NA	NA	NA	NA	CCDC9	10499	CAGE	JHUCS-1	hg19	FANTOM5	3.66615087101669
chr19	47776748	47776969	47776841	Y	GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1	BBC3,CCDC9,PRR24	NA	NA	NA	NA	PRR24	606	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	47854917	47855115	47854986	Y	ZC3H4,BBC3,CCDC9,C5AR1,GPR77,NAPA,DHX34	DHX34	NA	NA	NA	NA	DHX34	4379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	47893291	47893410	47893319	Y	ZC3H4,CCDC9,C5AR1,GPR77,NAPA,GLTSCR1,DHX34	DHX34,MEIS3	NA	NA	NA	NA	MEIS3	27370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	47961170	47962467	47962382	Y	SLC8A2	MEIS3,SLC8A2,KPTN	NA	NA	NA	NA	SLC8A2	10958	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	48016024	48016351	48016088	Y	SULT2A1,CCDC9,GPR77,DHX34,NAPA	SLC8A2,KPTN,NAPA	NA	NA	NA	NA	NAPA	146	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	48017457	48017515	48017486	Y	NA	SLC8A2,KPTN,NAPA	NA	NA	NA	NA	NAPA	960	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	48076356	48076760	48076653	Y	SLC8A2,ZNF541	NA	GLTSCR1,KPTN,MEIS3,SLC8A2,NAPA,LOC100505681,ZNF541	IMR90	Hi-C	24141950	NAPA	59859	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr19	48103581	48103982	48103689	Y	GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1	NA	GLTSCR1,NAPA	MCF7	ChIA-PET	22265404	NAPA	87084	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr19	48151789	48152128	48151872	Y	NA	NA	NA	NA	NA	NA	EHD2	62472	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	48648975	48649130	48649035	Y	SYNGR4,SPACA4	PLA2G4C,LIG1,ZNF114	NA	NA	NA	NA	LIG1	22730	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	48657871	48658185	48658028	Y	NA	PLA2G4C,LIG1,ZNF114	NA	NA	NA	NA	LIG1	13675	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	48903450	48903602	48903513	Y	NA	TMEM143,KDELR1,GRWD1	NA	NA	NA	NA	KDELR1	10640	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	49092091	49092636	49092297	Y	BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11	SPHK2,RPL18,DBP	NA	NA	NA	NA	SPHK2	27912	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	49493898	49494273	49494153	Y	NA	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	GYS1	294	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	49495555	49495708	49495609	Y	SPHK2,SPHK2,BCAT2,NUCB1,TRPM4	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	RUVBL2	850	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	49521043	49521282	49521101	Y	NA	GYS1,RUVBL2	NA	NA	NA	NA	RUVBL2	26338	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	50004159	50004640	50004502	Y	PNKP,SNRNP70,C19orf73,CD37,PRR12,IRF3,BCL2L12,ALDH16A1,FLT3LG,FLT3LG,RPL13A,RPS11	ALDH16A1,PIH1D1,FLT3LG,RPL13A,SNORD32A,SNORD33,SNORD34,RPS11,SNORD35B,FCGRT,RCN3	NA	NA	NA	NA	FCGRT	3433	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	50271422	50271787	50271602	Y	NA	AP2A1,FUZ,MED25	NA	NA	NA	NA	AP2A1	3197	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	50362574	50362883	50362717	Y	PRRG2,MYH14,PNKP	FUZ,MED25,PTOV1,PNKP,TBC1D17,AKT1S1	NA	NA	NA	NA	PNKP	6283	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	50888786	50889179	50888984	Y	ACPT,LOC342918	POLD1	NA	NA	NA	NA	POLD1	3325	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	50990086	50990332	50990328	Y	NA	FAM71E1,JOSD2,ASPDH	NA	NA	NA	NA	FAM71E1	12076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	50993680	50994951	50994565	Y	NA	FAM71E1,JOSD2,ASPDH	NA	NA	NA	NA	FAM71E1	15670	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	51166998	51167396	51167198	Y	KLK4,KLK6,KLK14,SYT3,LOC342918	SYT3	NA	NA	NA	NA	SYT3	2255	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	51182448	51182932	51182864	Y	NA	SYT3,SHANK1	NA	NA	NA	NA	SYT3	12797	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	51197974	51198378	51198356	Y	NA	SYT3,SHANK1	NA	NA	NA	NA	SHANK1	22329	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	51198423	51198838	51198828	Y	KLK6,KCNC3,ASPDH,LRRC4B,SYT3,SYT3,SHANK1	SYT3,SHANK1	NA	NA	NA	NA	SHANK1	21869	CAGE	JHUCS-1	hg19	FANTOM5	4.83265342088564
chr19	51287900	51288107	51288100	Y	NA	C19orf48	NA	NA	NA	NA	C19orf48	18079	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	52192085	52192767	52192400	Y	ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577	NA	NA	NA	NA	NA	ZNF175	119534	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	52192842	52193550	52192951	Y	ZNF615,IGLON5,ZNF577,ZNF577	NA	NA	NA	NA	NA	ZNF175	120291	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	52194056	52194504	52194155	Y	ZNF350,SIGLEC10,FPR2,FPR2,FPR1	NA	NA	NA	NA	NA	ZNF175	121505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	52194594	52195259	52195000	Y	ZNF615,ZNF350,C19orf75,IGLON5,CLDND2,SIGLEC10,FPR2,FPR2,FPR1	NA	NA	NA	NA	NA	ZNF175	122043	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	52697339	52697517	52697506	Y	ZNF350,ZNF432,ZNF836,ZNF83,ZNF808,ZNF766	ZNF836,PPP2R1A	NA	NA	NA	NA	PPP2R1A	6047	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	52734516	52734674	52734594	Y	ZNF610	PPP2R1A,ZNF766	NA	NA	NA	NA	ZNF766	36150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	53132219	53132465	53132335	Y	NA	NA	NA	NA	NA	NA	ZNF83	59284	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	53145294	53145545	53145446	Y	NA	ZNF83	NA	NA	NA	NA	ZNF83	46204	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	53150651	53150972	53150733	Y	NA	ZNF83	ZNF137P	IMR90	Hi-C	24141950	ZNF83	40777	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	53237186	53237523	53237297	Y	ZNF665,ZNF415,ZNF415,ZNF160,ZNF610,ZNF528,ZNF808,ZNF83,ZNF611,ZNF611	ZNF83,ZNF611	NA	NA	NA	NA	ZNF611	860	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	53425304	53425713	53425359	Y	ERVV-1,ZNF320	ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	18141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	53426305	53426488	53426354	Y	ZNF765,ZNF468,ZNF816	ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	17366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	53444729	53445104	53444918	Y	ZNF765,ZNF761,ZNF665,ZNF347,ZNF347,ZNF160,ZNF808,ZNF701,ZNF701,ZNF83,ZNF816	ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	875	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	53592651	53593387	53593361	Y	NA	ZNF160,ZNF415	NA	NA	NA	NA	ZNF160	11302	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	53635063	53635358	53635174	Y	ZNF160,ZNF665,ZNF415,ZNF415,ZNF347,ZNF347	ZNF160,ZNF415,ZNF347	NA	NA	NA	NA	ZNF415	733	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	53727403	53727861	53727738	Y	NA	ZNF665	NA	NA	NA	NA	ZNF665	32764	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr19	54707641	54707712	54707644	Y	NA	LENG1,MBOAT7,TSEN34,RPS9	NA	NA	NA	NA	RPS9	5031	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	55626810	55627228	55626935	Y	ZNF865,PPP1R12C	RDH13	NA	NA	NA	NA	PPP1R12C	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	55627475	55627790	55627718	Y	LILRB1,LILRB1,LILRB4,FCAR,NCR1,GP6,ZNF865,TMEM86B,TMEM150B,SHISA7,PPP6R1,PPP1R12C	RDH13,PPP1R12C	NA	NA	NA	NA	PPP1R12C	548	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	55909655	55909755	55909754	Y	PPP1R12C,TMEM150B	COX6B2,TMEM238,RPL28,UBE2S,SHISA7	NA	NA	NA	NA	UBE2S	7390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	55917170	55917359	55917333	Y	U2AF2,SUV420H2,COX6B2,UBE2S	TMEM238,RPL28,UBE2S,SHISA7	NA	NA	NA	NA	UBE2S	25	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	55962647	55962935	55962813	Y	SYT5,BRSK1,ZNF580,SHISA7	UBE2S,SHISA7,ISOC2,ZNF628,NAT14,SSC5D	NA	NA	NA	NA	ISOC2	8775	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	56097081	56097467	56097273	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581	SSC5D,SGK110,SBK2,ZNF579	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF579	6870	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	56098668	56099098	56098905	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581	SSC5D,SGK110,SBK2,ZNF579	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF579	8457	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	56116208	56117068	56116734	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	4872	CAGE	JHUCS-1	hg19	FANTOM5	2.83293476396744
chr19	56117286	56117783	56117722	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	5950	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr19	56118803	56119132	56118967	Y	COX6B2	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	7467	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	56148080	56148375	56148228	Y	ZNF580	ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2,EPN1	NA	NA	NA	NA	CCDC106	2053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	56224436	56224703	56224570	Y	TMEM150B	EPN1	NA	NA	NA	NA	EPN1	39844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	56621885	56622165	56622061	Y	NA	ZNF787,ZNF444	NA	NA	NA	NA	ZNF787	8484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	56789143	56789486	56789342	Y	NA	NA	NA	NA	NA	NA	ZNF542	87982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	57020241	57020583	57020445	Y	ZNF582,ZNF583,ZNF583,ZNF583,ZNF667,ZNF835,ZIM2,PEG3,PEG3,LOC147670,ZNF471,ZNF71,ZNF470,ZFP28	ZNF471	NA	NA	NA	NA	ZNF471	3029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	57781316	57781665	57781442	Y	ZSCAN4,ZNF154,ZNF460	ZNF805,ZNF460,ZNF543	NA	NA	NA	NA	ZNF460	7754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	57944833	57945004	57944919	Y	NA	ZNF548,ZNF17,ZNF749,VN1R1,ZNF772	NA	NA	NA	NA	ZNF749	136	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	57965552	57965851	57965609	Y	NA	ZNF17,ZNF749,VN1R1,ZNF772,ZNF419,ZNF773	NA	NA	NA	NA	VN1R1	3	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	57980425	57980680	57980553	Y	NA	ZNF749,VN1R1,ZNF772,ZNF419,ZNF773	NA	NA	NA	NA	ZNF772	6258	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58175767	58176046	58175802	Y	ZNF460,ZNF543,ZNF304,ZNF548,ZNF17,ZNF772,ZNF549,ZSCAN18,ZSCAN18,ZSCAN1,ZNF776,ZNF671,ZNF586,ZNF418,ZNF417,ZNF256,ZNF135,ZNF550,ZNF211,ZNF551	ZNF211,ZNF551	NA	NA	NA	NA	ZNF551	15291	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	58237757	58238155	58237774	Y	NA	ZNF551,ZNF671,ZNF776,ZNF586	ZNF154	IMR90	Hi-C	24141950	ZNF671	765	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr19	58315114	58315751	58315446	Y	ZNF543,ZNF549,ZNF418,ZNF135,ZNF154,ZNF552	ZNF586,ZNF552,ZNF587	NA	NA	NA	NA	ZNF552	8530	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58398826	58399093	58399050	Y	ZNF548,ZNF772,ZNF549,ZNF134,ZSCAN4,ZNF154,ZNF671,ZNF776,ZSCAN1,ZNF606,ZNF329,ZNF256,ZNF135,ZNF418	ZNF587,ZNF814,ZNF417,ZNF418	NA	NA	NA	NA	ZNF814	384	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58413801	58413982	58413868	Y	ZNF154,ZNF418	ZNF814,ZNF417,ZNF418,ZNF256	NA	NA	NA	NA	ZNF417	11996	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	58415823	58415990	58415970	Y	NA	ZNF814,ZNF417,ZNF418,ZNF256	NA	NA	NA	NA	ZNF417	9988	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr19	58480028	58480253	58480224	Y	NA	ZNF418,ZNF256,CTD-2368P22.1,ZNF606	NA	NA	NA	NA	ZNF256	22985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58557282	58557656	58557471	Y	NA	CTD-2368P22.1,ZNF606,ZNF135	NA	NA	NA	NA	ZNF135	10951	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58886804	58887095	58886950	Y	ZNF606,ZSCAN22,ZNF324B	A1BG-AS1,A1BG,ZNF497,ZNF837,RPS5,ZNF584	NA	NA	NA	NA	ZNF837	3332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58911739	58912056	58911822	Y	NA	A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF324B	NA	NA	NA	NA	ZNF584	868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr19	58912594	58912944	58912773	Y	ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324	A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF324B	NA	NA	NA	NA	ZNF584	1723	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr19	59058033	59058475	59058195	Y	NA	SLC27A5,ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1,MGC2752	NA	NA	NA	NA	TRIM28	4575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	1608037	1608218	1608215	Y	NA	NA	NA	NA	NA	NA	MYT1L	724814	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	1722150	1722351	1722236	Y	NA	NA	NA	NA	NA	NA	MYT1L	610681	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	1735614	1736022	1735851	Y	PXDN	NA	NA	NA	NA	NA	MYT1L	597010	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	2027188	2027378	2027302	Y	NA	NA	NA	NA	NA	NA	MYT1L	305654	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	2105199	2105393	2105246	Y	MYT1L	NA	NA	NA	NA	NA	MYT1L	227639	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	2311871	2312010	2311889	Y	NA	MYT1L	NA	NA	NA	NA	MYT1L	21022	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	2468009	2468259	2468065	Y	NA	NA	NA	NA	NA	NA	MYT1L	134977	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	2617084	2617480	2617333	Y	NA	NA	NA	NA	NA	NA	MYT1L	284052	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	3340825	3341028	3341010	Y	NA	TSSC1,TRAPPC12	NA	NA	NA	NA	TSSC1	38625	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	3487019	3487372	3487201	Y	NA	ADI1	NA	NA	NA	NA	ADI1	34135	CAGE	JHUCS-1	hg19	FANTOM5	3.49950764960684
chr2	6093477	6093863	6093670	Y	NA	LINC01105	NA	NA	NA	NA	LINC01105	22658	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	6912526	6912690	6912595	Y	NA	NA	NA	NA	NA	NA	RSAD2	91247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	7082324	7082720	7082522	Y	RNF144A	RNF144A	NA	NA	NA	NA	RNF144A	26801	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	7811089	7811448	7811186	Y	NA	NA	LOC100506274,LINC00299	IMR90	Hi-C	24141950	RNF144A	755566	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	8259183	8259343	8259265	Y	NA	NA	NA	NA	NA	NA	AC011747.4	462579	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	8548793	8549175	8549042	Y	ID2	NA	LOC100506274,LINC00299,LOC339788	IMR90	Hi-C	24141950	AC011747.4	172747	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	8743061	8743194	8743128	Y	ID2	AC011747.4	LOC100506274,ID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC011747.4	21139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	8872785	8872976	8872902	Y	NA	NA	NA	NA	NA	NA	AC011747.7	52792	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	8927568	8927875	8927735	Y	NA	KIDINS220	NA	NA	NA	NA	KIDINS220	47885	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	9391833	9392063	9392058	Y	NA	ASAP2	NA	NA	NA	NA	ASAP2	46939	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	9705660	9705808	9705714	Y	NA	ADAM17	NA	NA	NA	NA	ADAM17	11739	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	10075100	10075410	10075131	Y	TAF1B	GRHL1	GRHL1	IMR90	Hi-C	24141950	GRHL1	7931	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	10260365	10260994	10260486	Y	ODC1,TAF1B,RRM2,RRM2	CYS1	NA	NA	NA	NA	RRM2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	10274411	10274722	10274506	Y	TAF1B,RRM2,RRM2,C2orf48	RRM2	NA	NA	NA	NA	RRM2	13956	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	10330449	10330626	10330557	Y	NA	NA	NA	NA	NA	NA	RRM2	69994	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	10341486	10341905	10341708	Y	KLF11	NA	NA	NA	NA	NA	RRM2	81031	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	10489892	10489997	10489924	Y	HPCAL1	HPCAL1	NA	NA	NA	NA	HPCAL1	48877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	10550434	10550795	10550555	Y	HPCAL1,HPCAL1	ODC1,RP11-320M2.1	ODC1	IMR90	Hi-C	24141950	ODC1	35835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	10721200	10721506	10721353	Y	NA	NA	NA	NA	NA	NA	NOL10	106595	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	12443294	12443605	12443480	Y	TRIB2	NA	TRIB2,LOC100506474,MIR4262,LPIN1	IMR90	Hi-C	24141950	TRIB2	411410	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	12703502	12703613	12703558	Y	NA	NA	TRIB2	IMR90	Hi-C	24141950	TRIB2	151402	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	15199994	15200355	15200088	Y	NA	NA	NA	NA	NA	NA	FAM84A	429184	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	15464031	15464396	15464252	Y	NA	NA	NA	NA	NA	NA	NBAS	235058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	15481171	15481552	15481362	Y	NA	NA	NA	NA	NA	NA	NBAS	217902	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	15603966	15604351	15604182	Y	NA	NA	NA	NA	NA	NA	NBAS	95103	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	15629690	15629929	15629800	Y	NA	NA	NA	NA	NA	NA	NBAS	69525	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	15700375	15700622	15700454	Y	DDX1,NBAS	NBAS,DDX1	NA	NA	NA	NA	NBAS	921	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	16243100	16243429	16243303	Y	NA	NA	NA	NA	NA	NA	MYCNOS	162729	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	16493094	16493437	16493362	Y	MYCN	NA	NA	NA	NA	NA	FAM49A	352162	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	18807557	18807914	18807789	Y	NA	NA	OSR1	IMR90	Hi-C	24141950	RDH14	67611	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	19548078	19548301	19548191	Y	NA	OSR1	NA	NA	NA	NA	OSR1	8113	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	20356621	20356779	20356666	Y	NA	NA	SDC1,PUM2	IMR90	Hi-C	24141950	SDC1	66415	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	20491517	20491908	20491876	Y	NA	NA	SDC1	IMR90	Hi-C	24141950	PUM2	58087	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	20793103	20793496	20793437	Y	APOB	NA	HS1BP3,RHOB,PUM2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HS1BP3	55353	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	22333684	22333805	22333690	Y	NA	NA	NA	NA	NA	NA	KLHL29	1272283	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	23631132	23631189	23631161	Y	NA	KLHL29	NA	NA	NA	NA	KLHL29	25044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	23681941	23682000	23681953	Y	KLHL29	NA	NA	NA	NA	NA	KLHL29	75853	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	23901919	23902357	23902230	Y	UBXN2A	NA	NA	NA	NA	NA	ATAD2B	245627	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	24234264	24234694	24234378	Y	MFSD2B	C2orf44,FKBP1B	NA	NA	NA	NA	C2orf44	35751	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	24491623	24491942	24491630	Y	ATAD2B,NCOA1,ITSN2	NA	NA	NA	NA	NA	RPL36AP13	63439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	24580732	24581123	24580905	Y	NA	RPL36AP13,ITSN2	NA	NA	NA	NA	ITSN2	460	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	24713346	24713697	24713476	Y	DNAJC27,ITSN2	NCOA1	CENPO,NCOA1	IMR90	Hi-C	24141950	NCOA1	563	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	24859370	24859696	24859496	Y	NA	NA	NA	NA	NA	NA	NCOA1	146587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	24941895	24942247	24942153	Y	NCOA1	NA	NA	NA	NA	NA	CENPO	71758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	25021346	25021618	25021482	Y	NA	CENPO,PTRHD1	NA	NA	NA	NA	PTRHD1	7095	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	25272819	25273108	25272964	Y	DNMT3A,DNAJC27,EFR3B	EFR3B	NA	NA	NA	NA	EFR3B	9820	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	25352140	25352468	25352150	Y	DNAJC27,EFR3B,DNMT3A,DNMT3A	NA	NA	NA	NA	NA	EFR3B	89141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	25457688	25458068	25457878	Y	DNMT3A	NA	NA	NA	NA	NA	DNMT3A	105391	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	25545894	25546051	25546003	Y	NA	DNMT3A	NA	NA	NA	NA	DNMT3A	17408	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	25701614	25701880	25701747	Y	NA	NA	NA	NA	NA	NA	DNMT3A	138155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	25781272	25781487	25781393	Y	RAB10	NA	NA	NA	NA	NA	DTNB	113016	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	25789731	25789834	25789815	Y	RAB10	NA	NA	NA	NA	NA	DTNB	104669	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	26328559	26328812	26328686	Y	FAM59B,RAB10	NA	NA	NA	NA	NA	RAB10	73583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	26943701	26943984	26943834	Y	GPR113	AC015977.5,KCNK3,CENPA	NA	NA	NA	NA	KCNK3	30082	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27005355	27005756	27005547	Y	NA	CENPA	NA	NA	NA	NA	CENPA	20198	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27069178	27069486	27069284	Y	NA	DPYSL5	NA	NA	NA	NA	DPYSL5	563	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27072078	27072262	27072179	Y	UCN,CCDC164,OTOF,MAPRE3,DPYSL5	DPYSL5	NA	NA	NA	NA	DPYSL5	3463	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	27194386	27194503	27194476	Y	NA	MAPRE3	NA	NA	NA	NA	MAPRE3	2906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27304052	27304486	27304234	Y	CENPA,CENPA,DPYSL5,SLC5A6,PPM1G,GTF3C2,CAD,CGREF1	AGBL5,OST4,EMILIN1,KHK,CGREF1,ABHD1	NA	NA	NA	NA	KHK	3129	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27543962	27544264	27544065	Y	NA	SLC30A3,MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17	NA	NA	NA	NA	MPV17	2283	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27557346	27557529	27557503	Y	DPYSL5,C2orf16	MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513	NA	NA	NA	NA	MPV17	10799	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27614467	27614499	27614483	Y	EIF2B4,EIF2B4	AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513,FTH1P3,PPM1G,NRBP1	NA	NA	NA	NA	FTH1P3	233	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27878874	27879165	27879028	Y	SLC5A6,GTF3C2,NRBP1,IFT172,BRE,BRE,ZNF512,GPN1,CCDC121,GPN1,CCDC121,SUPT7L,SLC4A1AP	GPN1,CCDC121,SLC4A1AP,SUPT7L	NA	NA	NA	NA	SLC4A1AP	5173	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27939854	27940151	27940111	Y	NA	AC074091.13	RBKS,BRE,LOC100505716,FOSL2,PLB1	IMR90	Hi-C	24141950	AC074091.13	3255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	27958320	27958698	27958604	Y	NA	AC074091.13,MRPL33	BRE,PLB1,RBKS,MRPL33,FOSL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC074091.13	21721	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	28137373	28137669	28137575	Y	FOSL2,RBKS	BRE,RBKS	NA	NA	NA	NA	RBKS	25408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	28183212	28183402	28183309	Y	FOSL2	NA	NA	NA	NA	NA	RBKS	71247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	28400759	28401210	28400868	Y	RBKS,BRE,BRE,FOSL2	NA	NA	NA	NA	NA	FOSL2	212105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	28496743	28497020	28496828	Y	RBKS,PPP1CB,PPP1CB,FOSL2	NA	NA	NA	NA	NA	FOSL2	116295	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	28544438	28544734	28544586	Y	NA	NA	NA	NA	NA	NA	FOSL2	68581	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	28976141	28976573	28976382	Y	FOSL2,PPP1CB,PPP1CB,TRMT61B	PPP1CB	SPDYA	IMR90	Hi-C	24141950	PPP1CB	3635	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	28991945	28992473	28991994	Y	NA	PPP1CB	SPDYA	IMR90	Hi-C	24141950	PPP1CB	19439	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	29009696	29009902	29009742	Y	FOSL2,PPP1CB,PPP1CB	PPP1CB	NA	NA	NA	NA	PPP1CB	37190	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	29050679	29050871	29050775	Y	NA	TRMT61B	NA	NA	NA	NA	TRMT61B	40296	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	29055098	29055343	29055221	Y	SPDYA	TRMT61B	NA	NA	NA	NA	TRMT61B	35824	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	29075660	29075992	29075826	Y	TRMT61B	TRMT61B,WDR43	NA	NA	NA	NA	TRMT61B	15175	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	29352302	29352469	29352324	Y	NA	CLIP4	NA	NA	NA	NA	CLIP4	33731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	29439591	29440302	29440265	Y	NA	NA	NA	NA	NA	NA	CLIP4	121020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	29650647	29650979	29650813	Y	ALK	NA	NA	NA	NA	NA	CLIP4	332076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	30644745	30644849	30644777	Y	NA	LCLAT1	LBH,LCLAT1	IMR90	Hi-C	24141950	LCLAT1	23243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	30791728	30792075	30791902	Y	NA	NA	NA	NA	NA	NA	LCLAT1	123636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	31145047	31145178	31145113	Y	NA	NA	NA	NA	NA	NA	GALNT14	230890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	33688539	33688685	33688612	Y	NA	RASGRP3	NA	NA	NA	NA	RASGRP3	29148	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	36584242	36585529	36584872	Y	FEZ2,CRIM1	CRIM1	NA	NA	NA	NA	CRIM1	3173	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	36665586	36666219	36665918	Y	NA	NA	NA	NA	NA	NA	CRIM1	84517	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	36712578	36712925	36712822	Y	CRIM1,FEZ2	NA	NA	NA	NA	NA	CRIM1	131509	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	36790527	36791707	36791646	Y	NA	NA	NA	NA	NA	NA	FEZ2	79523	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	37116938	37117262	37117216	Y	NA	NA	NA	NA	NA	NA	STRN	74353	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	37139828	37140219	37140054	Y	NA	NA	NA	NA	NA	NA	STRN	51396	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	37383262	37383336	37383288	Y	NA	EIF2AK2	NA	NA	NA	NA	EIF2AK2	1054	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	37489254	37489354	37489306	Y	NA	CEBPZ	NA	NA	NA	NA	CEBPZ	32398	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	37842733	37843439	37843059	Y	EIF2AK2,CYP1B1,CDC42EP3	NA	CDC42EP3	IMR90	Hi-C	24141950	CDC42EP3	120172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	37851057	37851610	37851419	Y	EIF2AK2,EIF2AK2,QPCT,CYP1B1,CDC42EP3	NA	NA	NA	NA	NA	CDC42EP3	112001	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	37868257	37868517	37868387	Y	EIF2AK2,EIF2AK2,QPCT,CYP1B1,CDC42EP3	NA	NA	NA	NA	NA	CDC42EP3	95094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	37995727	37996117	37995888	Y	NA	CDC42EP3	CDC42EP3,PRKD3,QPCT	IMR90	Hi-C	24141950	CDC42EP3	32116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	38219907	38219960	38219946	Y	NA	NA	NA	NA	NA	NA	CYP1B1	115084	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	38348355	38348465	38348410	Y	NA	CYP1B1	CYP1B1,FAM82A1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CYP1B1	13311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	38368766	38369153	38368894	Y	CYP1B1	CYP1B1	NA	NA	NA	NA	CYP1B1	33722	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	38372999	38373624	38373225	Y	NA	CYP1B1	NA	NA	NA	NA	CYP1B1	37955	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	38429135	38429424	38429280	Y	NA	RPL7P12	NA	NA	NA	NA	RPL7P12	27286	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	38770175	38770358	38770267	Y	NA	NA	NA	NA	NA	NA	RPLP0P6	63255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	39079289	39079498	39079407	Y	SRSF7,ARHGEF33	DHX57,MORN2	NA	NA	NA	NA	DHX57	21577	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	39227784	39228037	39227911	Y	NA	NA	NA	NA	NA	NA	SOS1	121449	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	39665108	39665339	39665266	Y	NA	AC007246.3,MAP4K3	NA	NA	NA	NA	MAP4K3	2655	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	40484262	40484526	40484482	Y	NA	NA	NA	NA	NA	NA	SLC8A1	351667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	40647677	40648234	40647999	Y	NA	NA	NA	NA	NA	NA	SLC8A1	187959	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	40676285	40676532	40676459	Y	NA	NA	NA	NA	NA	NA	SLC8A1	159661	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	41141715	41142190	41142075	Y	NA	NA	NA	NA	NA	NA	SLC8A1	305522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	42133288	42133295	42133292	Y	NA	AC104654.2	NA	NA	NA	NA	AC104654.2	25568	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	42332532	42332812	42332662	Y	EML4	NA	EML4,LOC388942	IMR90	Hi-C	24141950	PKDCC	59372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	42412542	42412681	42412587	Y	NA	EML4	NA	NA	NA	NA	EML4	18052	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	42481657	42481775	42481735	Y	EML4	NA	NA	NA	NA	NA	EML4	87167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	42567305	42567366	42567336	Y	EML4	NA	NA	NA	NA	NA	COX7A2L	82862	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	43037224	43037999	43037611	Y	NA	HAAO	THADA,ZFP36L2,LOC100129726,HAAO	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	HAAO	19491	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr2	43310956	43311104	43311039	Y	NA	NA	THADA,ZFP36L2,LOC100129726	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZFP36L2	140644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	43672480	43672679	43672609	Y	NA	NA	NA	NA	NA	NA	THADA	148506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	44007303	44007575	44007439	Y	NA	DYNC2LI1	NA	NA	NA	NA	DYNC2LI1	8125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	44212195	44212421	44212308	Y	NA	LRPPRC	NA	NA	NA	NA	LRPPRC	8723	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	44577605	44577885	44577745	Y	NA	PREPL,CAMKMT	NA	NA	NA	NA	PREPL	9116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	45955611	45956065	45955689	Y	NA	NA	NA	NA	NA	NA	PRKCE	79127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	45999486	45999797	45999642	Y	NA	NA	NA	NA	NA	NA	PRKCE	123002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	46265425	46265774	46265513	Y	NA	NA	NA	NA	NA	NA	EPAS1	253032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	46857387	46857788	46857588	Y	NA	CRIPT,PIGF	NA	NA	NA	NA	PIGF	15129	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	46993562	46993962	46993767	Y	NA	NA	NA	NA	NA	NA	SOCS5	69471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	47282124	47282371	47282214	Y	NA	NA	NA	NA	NA	NA	MCFD2	115130	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	47297632	47297822	47297725	Y	NA	NA	NA	NA	NA	NA	CALM2	103918	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	47790557	47790758	47790693	Y	KCNK12	KCNK12	NA	NA	NA	NA	KCNK12	5320	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	47796567	47796699	47796698	Y	NA	KCNK12	NA	NA	NA	NA	KCNK12	489	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	48709527	48709805	48709665	Y	FOXN2,KLRAQ1	PPP1R21,STON1	NA	NA	NA	NA	PPP1R21	43790	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	50631357	50631742	50631589	Y	NRXN1	NA	NA	NA	NA	NA	AC007560.1	423074	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	50640036	50640337	50640124	Y	NRXN1	NA	NA	NA	NA	NA	AC007560.1	414479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	50778633	50778874	50778754	Y	NRXN1,NRXN1	NA	NA	NA	NA	NA	AC007560.1	275942	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	51011974	51012360	51012310	Y	NRXN1,NRXN1	AC007560.1	NA	NA	NA	NA	AC007560.1	42456	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	51092337	51092826	51092639	Y	NRXN1	AC007560.1	NA	NA	NA	NA	AC007560.1	37521	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	53966054	53966447	53966241	Y	PSME4	CHAC2,ERLEC1	NA	NA	NA	NA	CHAC2	26482	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	54022416	54022710	54022562	Y	NA	CHAC2,ERLEC1	NA	NA	NA	NA	ERLEC1	10235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	54196339	54196842	54196524	Y	ASB3,ASB3,PSME4	ACYP2,PSME4	NA	NA	NA	NA	PSME4	362	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	54285444	54285567	54285472	Y	NA	NA	SPTBN1,EML6,PSME4	IMR90	Hi-C	24141950	PSME4	89467	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	54786900	54787386	54787056	Y	NA	NA	NA	NA	NA	NA	SPTBN1	105478	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	54796924	54797237	54797074	Y	SPTBN1	NA	NA	NA	NA	NA	SPTBN1	115502	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	54816609	54817000	54816923	Y	SPTBN1	NA	NA	NA	NA	NA	EML6	131636	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	54967479	54967831	54967651	Y	NA	EML6	NA	NA	NA	NA	EML6	18843	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	54971761	54972012	54971777	Y	NA	EML6	NA	NA	NA	NA	EML6	23125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55193261	55193511	55193360	Y	NA	NA	NA	NA	NA	NA	RTN4	144246	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55212013	55212317	55212165	Y	CCDC88A	NA	NA	NA	NA	NA	RTN4	125440	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55249584	55250267	55249993	Y	NA	NA	NA	NA	NA	NA	RTN4	87490	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	55346891	55347057	55346962	Y	NA	RTN4	RTN4,EML6,C2orf63	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RTN4	9134	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55388870	55389267	55389215	Y	NA	NA	NA	NA	NA	NA	RTN4	51113	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55450545	55450658	55450592	Y	CCDC88A,EML6,RTN4	RPS27A,MTIF2	NA	NA	NA	NA	RPS27A	6381	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	55552986	55553278	55553132	Y	NA	NA	NA	NA	NA	NA	MTIF2	58503	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55558772	55559057	55558882	Y	NA	NA	NA	NA	NA	NA	MTIF2	64289	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	55767070	55767336	55767332	Y	NA	CCDC104	NA	NA	NA	NA	CCDC104	22330	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	56239449	56239594	56239531	Y	EFEMP1	NA	PNPT1,EFEMP1	IMR90	Hi-C	24141950	EFEMP1	90175	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	56682750	56682916	56682833	Y	NA	NA	NA	NA	NA	NA	AC007743.1	271845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	58119993	58120210	58120123	Y	VRK2,VRK2,VRK2	VRK2	NA	NA	NA	NA	VRK2	12576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	58334895	58335527	58335141	Y	VRK2,VRK2,VRK2	NA	NA	NA	NA	NA	FANCL	130980	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	58347874	58348075	58347917	Y	NA	NA	NA	NA	NA	NA	FANCL	118432	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	58384642	58384701	58384672	Y	NA	NA	NA	NA	NA	NA	FANCL	81806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	59385638	59385932	59385785	Y	NA	NA	NA	NA	NA	NA	LINC01122	732704	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	60693527	60693793	60693660	Y	PAPOLG,BCL11A	NA	NA	NA	NA	NA	RNU1-32P	83787	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	60694019	60694324	60694172	Y	BCL11A	NA	NA	NA	NA	NA	RNU1-32P	84279	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	60694839	60695290	60695042	Y	PAPOLG,BCL11A	NA	NA	NA	NA	NA	BCL11A	83412	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	60711222	60711498	60711369	Y	REL	NA	NA	NA	NA	NA	BCL11A	67204	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	60712095	60712413	60712305	Y	NA	NA	NA	NA	NA	NA	BCL11A	66289	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	60775877	60776167	60775994	Y	NA	BCL11A	NA	NA	NA	NA	BCL11A	2535	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	60778604	60778787	60778696	Y	REL,BCL11A	NA	NA	NA	NA	NA	BCL11A	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	60962204	60962802	60962781	Y	NA	PAPOLG	NA	NA	NA	NA	PAPOLG	18563	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61140048	61140151	61140100	Y	REL	REL,RNU4-51P	NA	NA	NA	NA	RNU4-51P	3610	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61207503	61207627	61207564	Y	NA	PEX13,PUS10	NA	NA	NA	NA	PEX13	34733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61353902	61353922	61353912	Y	NA	AHSA2	NA	NA	NA	NA	AHSA2	48631	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	61464355	61464721	61464539	Y	NA	NA	NA	NA	NA	NA	AHSA2	61802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61748471	61748954	61748828	Y	NA	XPO1	NA	NA	NA	NA	XPO1	14807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61757728	61758222	61758112	Y	NA	XPO1	NA	NA	NA	NA	XPO1	5539	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	61766465	61766637	61766569	Y	AHSA2,USP34	XPO1	NA	NA	NA	NA	XPO1	2704	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61921641	61922071	61921953	Y	NA	NA	NA	NA	NA	NA	FAM161A	157207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	61991278	61991660	61991557	Y	NA	NA	XPO1,FAM161A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM161A	87618	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr2	63601034	63601048	63601041	Y	NA	NA	NA	NA	NA	NA	MDH1	212695	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	63961711	63961835	63961773	Y	NA	NA	UGP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC096664.1	52272	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64175541	64175571	64175556	Y	NA	NA	NA	NA	NA	NA	VPS54	68635	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	64239166	64239247	64239208	Y	PELI1	VPS54	NA	NA	NA	NA	VPS54	4959	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	64245195	64245602	64245370	Y	NA	VPS54	NA	NA	NA	NA	VPS54	989	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	64291243	64291430	64291349	Y	NA	VPS54	LINC00309,PELI1	IMR90	Hi-C	24141950	VPS54	47037	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64352533	64352773	64352693	Y	NA	AC074289.1,PELI1	NA	NA	NA	NA	AC074289.1	15600	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64360908	64361228	64361132	Y	NA	AC074289.1,PELI1	NA	NA	NA	NA	AC074289.1	7145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64364775	64365257	64365170	Y	NA	AC074289.1,PELI1	NA	NA	NA	NA	AC074289.1	3116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64439546	64439941	64439735	Y	SERTAD2,AFTPH,PELI1	NA	NA	NA	NA	NA	PELI1	69958	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64487793	64488354	64488032	Y	PELI1,SERTAD2,AFTPH	NA	NA	NA	NA	NA	PELI1	118205	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64756167	64756526	64756224	Y	NA	AFTPH	NA	NA	NA	NA	AFTPH	6702	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64821728	64822106	64821796	Y	SLC1A4,PELI1	NA	NA	NA	NA	NA	AFTPH	72263	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	64978173	64978610	64978385	Y	CEP68	SERTAD2	SERTAD2,LOC339807,AFTPH	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	2034	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	65214378	65214996	65214823	Y	NA	SLC1A4	NA	NA	NA	NA	SLC1A4	767	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	65326595	65326952	65326834	Y	NA	CEP68,RAB1A	NA	NA	NA	NA	RAB1A	28288	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	65657861	65658229	65658008	Y	SLC1A4,SPRED2,SPRED2	SPRED2	NA	NA	NA	NA	SPRED2	90	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	66652427	66652950	66652646	Y	MEIS1	MEIS1,MEIS1-AS3	LOC644838	IMR90	Hi-C	24141950	MEIS1	5634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	66801899	66802241	66801940	Y	MEIS1	AC007392.3	NA	NA	NA	NA	AC007392.3	2737	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	66804720	66805040	66804911	Y	NA	AC007392.3	NA	NA	NA	NA	AC007392.3	5558	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	66805277	66805644	66805568	Y	MEIS1	AC007392.3	NA	NA	NA	NA	AC007392.3	6115	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	67625110	67625487	67625291	Y	ETAA1	ETAA1	NA	NA	NA	NA	ETAA1	2659	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	68278313	68278683	68278526	Y	NA	NA	NA	NA	NA	NA	C1D	57397	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	68428934	68429266	68429100	Y	NA	WDR92,PNO1	NA	NA	NA	NA	PNO1	45958	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	68472906	68473226	68473141	Y	PPP3R1	PPP3R1	NA	NA	NA	NA	PPP3R1	8143	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	68544914	68545935	68545552	Y	CNRIP1	NA	NA	NA	NA	NA	CNRIP1	0	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr2	68997602	68997807	68997698	Y	PLEK,FBXO48,ARHGAP25,ARHGAP25	NA	NA	NA	NA	NA	ANTXR1	240503	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	69056301	69056845	69056525	Y	PLEK,FBXO48,APLF,ARHGAP25,ARHGAP25	NA	NA	NA	NA	NA	ANTXR1	181465	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	69250610	69250802	69250769	Y	NA	ANTXR1	NA	NA	NA	NA	ANTXR1	12300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	69419782	69420224	69419939	Y	NA	NA	NA	NA	NA	NA	ANTXR1	181472	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	69424670	69425029	69424849	Y	NA	NA	NA	NA	NA	NA	ANTXR1	186360	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	69852685	69852770	69852748	Y	NA	ANXA4,AAK1	NA	NA	NA	NA	ANXA4	16787	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	69857892	69858266	69858093	Y	NA	ANXA4,AAK1	NA	NA	NA	NA	ANXA4	11291	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	70141198	70141461	70141241	Y	NA	SNRNP27,MXD1,ASPRV1	NA	NA	NA	NA	MXD1	18378	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	70255582	70255905	70255725	Y	MXD1,PCBP1	NA	NA	NA	NA	NA	PCBP1	56680	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	70266434	70266774	70266735	Y	GMCL1,MXD1,ASPRV1,PCBP1	PCBP1,PCBP1-AS1	NA	NA	NA	NA	PCBP1	45811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	70285414	70285703	70285559	Y	NA	PCBP1,PCBP1-AS1,AC016700.4	NA	NA	NA	NA	PCBP1	26882	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	70294861	70295138	70295000	Y	NA	PCBP1,PCBP1-AS1,AC016700.4	NA	NA	NA	NA	PCBP1	17447	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	71228347	71228418	71228366	Y	ANKRD53	ANKRD53,TEX261	TEX261	MCF7,K562	ChIA-PET	22265404	TEX261	8272	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	72372444	72372716	72372574	Y	CYP26B1	CYP26B1	NA	NA	NA	NA	CYP26B1	451	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	72980109	72980387	72980306	Y	NA	NA	NA	NA	NA	NA	EXOC6B	70783	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	73613683	73613856	73613817	Y	DUSP11,ALMS1	ALMS1	NA	NA	NA	NA	ALMS1	2797	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	74237302	74237493	74237398	Y	NA	DGUOK-AS1,AC073046.25,TET3	DGUOK	IMR90	Hi-C	24141950	TET3	9462	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	74446656	74447054	74446868	Y	NA	MOB1A,MTHFD2	NA	NA	NA	NA	MTHFD2	22967	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	74647656	74647929	74647851	Y	SLC4A5,SLC4A5,DCTN1,C2orf81	DCTN1,C2orf81,WDR54,INO80B,WBP1,MOGS	NA	NA	NA	NA	WDR54	851	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	74939422	74939597	74939510	Y	NA	AC007387.2	HK2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC007387.2	40349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	75894065	75894458	75894192	Y	NA	MRPL19,GCFC2	NA	NA	NA	NA	MRPL19	22156	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	75903279	75903482	75903481	Y	C2orf3,C2orf3	MRPL19,GCFC2	NA	NA	NA	NA	MRPL19	31370	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	75912574	75912759	75912685	Y	NA	MRPL19,GCFC2	NA	NA	NA	NA	GCFC2	23356	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	80850170	80850196	80850188	Y	NA	NA	NA	NA	NA	NA	CTNNA2	1439813	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	82896168	82896224	82896196	Y	NA	NA	NA	NA	NA	NA	AC098817.3	147031	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	83460597	83460801	83460699	Y	NA	NA	NA	NA	NA	NA	AC098817.3	417342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	84299529	84299779	84299675	Y	NA	NA	NA	NA	NA	NA	SUCLG1	385390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	84683355	84683532	84683444	Y	NA	SUCLG1	NA	NA	NA	NA	SUCLG1	1637	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	85242321	85242336	85242334	Y	NA	KCMF1	NA	NA	NA	NA	KCMF1	46105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	85664544	85665596	85664830	Y	KCMF1,TGOLN2,CAPG,SH2D6	NA	NA	NA	NA	NA	RETSAT	84801	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr2	86102907	86103036	86102912	Y	NA	ST3GAL5	NA	NA	NA	NA	ST3GAL5	11101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	86284876	86285205	86285126	Y	NA	POLR1A,PTCD3	NA	NA	NA	NA	POLR1A	46073	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	88353539	88354148	88353800	Y	KRCC1	RNU2-63P,KRCC1	NA	NA	NA	NA	KRCC1	291	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	88923115	88923478	88923431	Y	NA	EIF2AK3	NA	NA	NA	NA	EIF2AK3	1616	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	90485310	90485405	90485339	Y	NA	NA	NA	NA	NA	NA	RPIA	1496148	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	91936197	91936406	91936290	Y	NA	NA	NA	NA	NA	NA	RPIA	2947035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	95961879	95962169	95961976	Y	TRIM43,KCNIP3	KCNIP3	NA	NA	NA	NA	KCNIP3	827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	96348390	96348623	96348461	Y	NA	NA	NA	NA	NA	NA	FAHD2A	281921	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	96871048	96871111	96871053	Y	ASTL,DUSP2,KIAA1310,ARID5A,TMEM127	STARD7	NA	NA	NA	NA	STARD7	1452	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	96922307	96922515	96922363	Y	DUSP2,KIAA1310,ARID5A,TMEM127	STARD7,TMEM127,CIAO1,SNRNP200	NA	NA	NA	NA	TMEM127	7217	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	96995983	96996007	96995995	Y	ITPRIPL1,ITPRIPL1	SNRNP200,AC021188.4,ITPRIPL1,NCAPH	NA	NA	NA	NA	NCAPH	3518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	97291626	97292008	97291852	Y	NA	FER1L5,KANSL3	NA	NA	NA	NA	FER1L5	14466	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	97522669	97523105	97522935	Y	NA	CNNM3,ANKRD23,ANKRD39,SEMA4C	NA	NA	NA	NA	ANKRD39	837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	98485830	98486136	98485916	Y	NA	NA	NA	NA	NA	NA	TMEM131	124252	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	98598628	98598759	98598694	Y	NA	TMEM131	NA	NA	NA	NA	TMEM131	11629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	98822932	98823207	98823080	Y	NA	NA	NA	NA	NA	NA	TMEM131	212544	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	99213145	99213306	99213215	Y	INPP4A	COA5,UNC50	NA	NA	NA	NA	COA5	9672	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100036640	100036800	100036773	Y	NA	NA	NA	NA	NA	NA	REV1	67697	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	100104968	100105518	100105262	Y	REV1	REV1	NA	NA	NA	NA	REV1	471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100323852	100324185	100324151	Y	NA	NA	NA	NA	NA	NA	REV1	219355	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100355592	100355970	100355781	Y	AFF3,LYG2	NA	NA	NA	NA	NA	REV1	251095	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100388150	100388296	100388223	Y	NA	NA	NA	NA	NA	NA	REV1	283653	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100412009	100412328	100412169	Y	NA	NA	NA	NA	NA	NA	REV1	307512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100484034	100484497	100484368	Y	NA	NA	NA	NA	NA	NA	REV1	379537	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100498420	100498601	100498511	Y	AFF3	NA	NA	NA	NA	NA	REV1	393923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100576722	100576856	100576853	Y	NA	NA	NA	NA	NA	NA	LONRF2	360339	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100630312	100630613	100630507	Y	AFF3	NA	NA	NA	NA	NA	LONRF2	306582	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100650880	100650932	100650906	Y	NA	NA	NA	NA	NA	NA	LONRF2	286263	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100654601	100654935	100654768	Y	NA	NA	NA	NA	NA	NA	LONRF2	282260	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	100685193	100685529	100685389	Y	AFF3	NA	NA	NA	NA	NA	LONRF2	251666	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	100937334	100937484	100937407	Y	LONRF2	LONRF2	NA	NA	NA	NA	LONRF2	139	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	101010496	101010959	101010820	Y	AFF3	CHST10	NA	NA	NA	NA	CHST10	21159	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	101872333	101872649	101872491	Y	RNF149	TBC1D8,SNORD89	NA	NA	NA	NA	TBC1D8	5005	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	101884483	101884674	101884578	Y	MAP4K4,MAP4K4,RNF149	TBC1D8,SNORD89,RNF149	NA	NA	NA	NA	SNORD89	2837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	101922226	101922443	101922331	Y	NA	SNORD89,RNF149	NA	NA	NA	NA	RNF149	720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	101922561	101923216	101923063	Y	NA	SNORD89	NA	NA	NA	NA	RNF149	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	102327240	102327383	102327307	Y	NA	MAP4K4	NA	NA	NA	NA	MAP4K4	15928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	102399741	102400097	102399970	Y	NA	NA	NA	NA	NA	NA	MAP4K4	88429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	102492851	102493221	102493042	Y	NA	NA	NA	NA	NA	NA	MAP4K4	181539	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	103390349	103390733	103390541	Y	NA	MFSD9,TMEM182	NA	NA	NA	NA	TMEM182	38982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	105430210	105430587	105430504	Y	NA	LINC01158	NA	NA	NA	NA	LINC01158	37054	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	105477972	105479094	105478260	Y	NA	LINC01158,LINC01159	NA	NA	NA	NA	LINC01159	7959	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	106008939	106009297	106009286	Y	NA	FHL2	NA	NA	NA	NA	FHL2	43673	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	106755891	106756182	106756037	Y	NA	NA	NA	NA	NA	NA	UXS1	52613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	106809174	106809856	106809272	Y	UXS1	UXS1	NA	NA	NA	NA	UXS1	379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	108805860	108806149	108806048	Y	NA	NA	NA	NA	NA	NA	GCC2	256868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	109210699	109211038	109210811	Y	LIMS1,RANBP2,LIMS1,LIMS1	NA	NA	NA	NA	NA	LIMS1	61842	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	109211421	109211903	109211563	Y	LIMS1,RANBP2,LIMS1,LIMS1	NA	NA	NA	NA	NA	LIMS1	62564	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	109506497	109506716	109506551	Y	LIMS1,CCDC138,EDAR	NA	NA	NA	NA	NA	CCDC138	105284	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	109514642	109514975	109514799	Y	NA	NA	NA	NA	NA	NA	CCDC138	113429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	110012610	110012858	110012734	Y	NA	NA	NA	NA	NA	NA	SH3RF3	268806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	110318153	110318301	110318244	Y	NA	NA	NA	NA	NA	NA	SEPT10	51482	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	113292630	113292957	113292832	Y	IL1A	POLR1B,CHCHD5	NA	NA	NA	NA	POLR1B	4535	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	113448603	113448987	113448785	Y	IL36B,IL36G,IL1RN,IL1B,IL1A	SLC20A1	POLR1B,CHCHD5,SLC20A1,CKAP2L,FLJ42351	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC20A1	47169	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	113476608	113476855	113476657	Y	POLR1B,IL1A	CKAP2L	NA	NA	NA	NA	CKAP2L	43399	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	113969874	113970195	113970111	Y	NA	NA	NA	NA	NA	NA	WASH2P	369469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	114469366	114469830	114469722	Y	SLC35F5	MIR4782,SLC35F5	NA	NA	NA	NA	MIR4782	7115	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	114652011	114652405	114652035	Y	CBWD2,ACTR3	ACTR3	NA	NA	NA	NA	ACTR3	6474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	114653014	114653311	114653090	Y	CBWD2,ACTR3	ACTR3	NA	NA	NA	NA	ACTR3	7477	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	116280969	116281118	116281045	Y	NA	NA	NA	NA	NA	NA	DPP10	1083093	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	116469497	116469517	116469506	Y	NA	NA	NA	NA	NA	NA	DPP10	1271621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	118578074	118578451	118578195	Y	CCDC93,DDX18	DDX18	NA	NA	NA	NA	DDX18	7848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	118737562	118738119	118738029	Y	DDX18,CCDC93	CCDC93	NA	NA	NA	NA	CCDC93	31590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	118739522	118739775	118739730	Y	DDX18,CCDC93	CCDC93	NA	NA	NA	NA	CCDC93	29934	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	118982588	118982758	118982695	Y	NA	AC093901.1	EN1	IMR90	Hi-C	24141950	AC093901.1	40626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	119067655	119067950	119067737	Y	NA	NA	NA	NA	NA	NA	AC093901.1	125693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	120891923	120892273	120892121	Y	NA	NA	NA	NA	NA	NA	TMEM185B	86711	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	121011894	121012098	121011996	Y	TMEM185B,RALB	TMEM185B,RALB	NA	NA	NA	NA	RALB	16254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	121303695	121304155	121304026	Y	NA	NA	RALB,LOC84931,INHBB	IMR90	Hi-C	24141950	GLI2	187044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	122226715	122226882	122226860	Y	NA	NA	NA	NA	NA	NA	RNU4ATAC	59575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	122298770	122299123	122298947	Y	NA	RNU4ATAC	NA	NA	NA	NA	RNU4ATAC	12313	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	122405703	122406017	122405860	Y	NA	CLASP1,NIFK-AS1	NA	NA	NA	NA	NIFK-AS1	477	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	127862933	127863341	127863123	Y	NA	BIN1	NA	NA	NA	NA	BIN1	2	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	128207199	128207568	128207384	Y	NA	RNU4-48P	NA	NA	NA	NA	RNU4-48P	20242	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	128258405	128258697	128258648	Y	NA	RNU4-48P,IWS1	NA	NA	NA	NA	IWS1	23765	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	128562322	128562673	128562571	Y	NA	WDR33	LIMS2	IMR90	Hi-C	24141950	WDR33	4088	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	128598749	128599093	128599053	Y	IWS1,SFT2D3,AMMECR1L	WDR33,POLR2D	NA	NA	NA	NA	POLR2D	14638	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	129074706	129075071	129074888	Y	NA	HS6ST1	NA	NA	NA	NA	HS6ST1	555	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	129381655	129381863	129381711	Y	NA	NA	UGGT1,HS6ST1	IMR90	Hi-C	24141950	HS6ST1	307504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	131149333	131149678	131149410	Y	FAM123C,FAM123C,FAM123C	PTPN18	NA	NA	NA	NA	PTPN18	37753	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	131485043	131485533	131485339	Y	NA	NA	NA	NA	NA	NA	ARHGEF4	106956	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	131555592	131555820	131555689	Y	CCDC115	ARHGEF4	PLEKHB2,FAM168B	K562,MCF7	ChIA-PET	22265404	ARHGEF4	36669	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	131828545	131828813	131828794	Y	NA	FAM168B,PLEKHB2	NA	NA	NA	NA	FAM168B	20220	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	133029863	133030277	133030073	Y	NA	NA	GPR39,CEP68,STAMBP,NRXN1,KCNIP3,ADCY3,EML4,DDX1,MIR4778,STARD7,TGOLN2,MAP3K2,RNU4ATAC,GCC2,CNNM3,LHCGR,LOC100189589,CLASP1,GMCL1,SULT6B1,ANKRD20A8P,MRPS9,NMS,RHOQ,CAPG,DGUOK,SMYD5,MPHOSPH10,ARID5A,HAAO,RMND5A,LOC440905,LIMS2,FOXN2,GPAT2,CIB4,LOC100216479,FEZ2,LOC729121,TTC7A,RTKN,CDKL4,POLR2D,LOC339803,EMILIN1,LYG1,MYCNOS,STEAP3,FAM49A,CKAP2L,EFR3B,OTOF,HK2,CNGA3,GEMIN6,ALK,SPR,LOC440895,IL18RAP,LOC375190,PTRHD1,C2orf81,MATN3,PEX13,FABP1,NPHP1,FAM161A,DDX18,ADRA2B,KRCC1,BIRC6,CCDC74B,C2orf49,THNSL2,ST3GAL5,NAT8B,ERCC3,CCDC88A,QPCT,LOC100506123,TLX2,REG1A,LOC284950,CHCHD5,SMC6,LOC254128,PNPT1,DBI,LOC100505716,LOC285103,TMSB10,RAD51AP2,MGAT4A,PLEKHH2,ELMOD3,PKDCC,GALM,GLI2,LIMS3-LOC440895,RPL31,ASXL2,LOC100132215,SMEK2,FBLN7,EPT1,SRSF7,DUSP2,CYP4F30P,LOC100131320,LOC388948,ATOH8,GCFC2,ACTR2,C2orf27B,IWS1,GPR17,MTIF2,LBX2,POU3F3,SUPT7L,SPDYA,TEKT4,ANKRD39,WDR54,RAB1A,IL36A,FAM123C,LOC285000,REV1,GPR148,MRPL33,EPB41L5,RPS27A,CEBPZ,EHBP1,RALB,APOB,DUSP11,LOC400958,CRIPT,CYP1B1-AS1,CHAC2,GFPT1,NPAS2,PTCD3,LOC389023,TRIM54,SFXN5,MALL,NT5C1B-RDH14,LOC100507334,POLE4,C2orf18,IL1A,C2orf73,CD8A,ATL2,LOC654342,UNC50,ITPRIPL1,HADHB,IL1R1,ZFP36L2,MAP4K3,FIGLA,LOC440900,ZNF512,POTEE,PDCL3,ABCG8,CCDC142,MYADML,MIR4783,PCBP1-AS1,PFN4,LOC150568,SEMA4F,TMEM177,LOC401010,MRPL19,GCKR,TTC32,GGCX,LOC151009,THUMPD2,LOC728537,IL36B,PCDP1,VAMP5,LRRTM4,SF3B14,SULT1C2,RGPD4,MCEE,AAK1,SFTPB,SLC5A7,SCTR,ACTR1B,CIAO1,DNAJC5G,SIX3,SERTAD2,PIGF,CD8B,GGT8P,SLC9A2,NFU1,SNAR-H,POTEKP,VWA3B,SH3RF3,FAHD2B,UBXN2A,LOC284998,MEIS1,FAM98A,LOC90784,LAPTM4A,CCDC104,LOC100499194,MAPRE3,PPP1R21,ANXA4,LOC440910,LOC100506421,FAM84A,GKN2,TMEM185B,RASGRP3,ABHD1,AFF3,CRIM1,MOGS,BOLA3,DNAJC27,MZT2B,MAL,NRBP1,UXS1,PRKD3,SOCS5,FLJ30838,TTC31,RNF103-CHMP3,HADHA,MIR4435-1,NOTO,RPL23AP7,C1QL2,CHMP3,RNF149,AUP1,TBC1D8,AGBL5,GYPC,MSH6,LOC728730,VPS54,EIF5B,GALNT14,PLEK,GEN1,LOC100505876,MIR4432,VAMP8,ST6GAL2,C2orf91,KIAA1841,MORN2,LOC100128590,IL1RL2,BMP10,EIF2B4,ARHGEF4,REG3A,SULT1C3,ADD2,TSN,IFT172,TSGA10,HNRPLL,DPY30,LGALSL,ZNF2,ZNF638,IMP4,CCDC138,INSIG2,ACOXL,FBXO41,DYSF,C2orf51,TMEM214,TMEM127,ALMS1P,CDC42EP3,MZT2A,TMEM150A,EGR4,FOXI3,C2orf16,FOSL2,OR7E91P,UGGT1,TMEM87B,TXNDC9,NBAS,CREG2,RGPD6,ABCG5,PUM2,RNF181,LINC00116,LOC646743,MIR4757,C2orf78,MRPL35,LOC541471,INHBB,RHOB,LOC388942,STON1-GTF2A1L,DCTN1,CCDC115,LOC100129726,KCNS3,UNQ6975,ZAP70,NAGK,C2orf53,MIR4436A,C2orf76,THADA,VRK2,SLC5A6,RABL2A,CCDC75,PLEKHB2,MXD1,ANKRD36BP2,REG1P,MIR217,C2orf63,ASTL,WDR33,NLRC4,XPO1,RETSAT,TUBA3E,TRIM43B,CAMKMT,BCL2L11,PUS10,PAIP2B,RPIA,SH2D6,PCBP1,USP39,REG3G,FSHR,MYCN,SEMA4C,ANKRD23,C1D,IL1R2,MKI67IP,MOB1A,LOC389043,ACTR3BP2,EPCAM,MAT2A,PCGF1,RGPD2,BIN1,KANSL3,LOC100287010,LOXL3,CD207,DPYSL5,VAX2,PPP1CB,POLR1A,LOC644838,BCL11A,SULT1C4,ANKRD36,DBIL5P2,B3GNT2,LINC00309,ARHGEF33,ANKRD30BL,TFCP2L1,C2orf89,IL1F10,OTX1,PPM1B,GKN1,ANTXR1,FKBP1B,ATP6V1B1,CCT7,CCDC74A,TEX261,MTA3,MFSD9,COX5B,RGPD1,FOXD4L1,FLJ42351,EFEMP1,SLC30A6,FAM168B,GDF7,NEURL3,TUBA3D,POLR1B,USP34,MSH2,MFSD2B,EXOC6B,RANBP2,LRRTM1,LOC100286979,C2orf84,KCNK12,MIR4267,CAD,FAM138B,SPRED2,HTRA2,ACTG2,AHSA2,SLC30A3,RBKS,NCK2,MIR548AD,FLJ16341,TRMT61B,SLC1A4,PROKR1,ATAD2B,LOC100630918,LCLAT1,CAPN14,LMAN2L,C2orf65,CTNNA2,SRD5A2,MIR4265,CCT4,INPP4A,SLC20A1,COX7A2L,SNRNP27,TMEM178,MIR4266,SULT1C2P1,MIR4436B1,MRPS5,IMMT,ALMS1,CYP27C1,HS6ST1,LOC728819,WTH3DI,CHST10,LOC375196,SMPD4,OSR1,PAPOLG,KRTCAP3,EPAS1,MDH1,C2orf74,IL18R1,LOC1720,CCDC164,LOC285074,VIT,PLGLB2,C2orf61,LONRF2,CCDC85A,UCN,C2orf28,DQX1,FAM178B,CENPA,MRPL30,MERTK,TCF23,DNAJC27-AS1,FAM176A,IL36G,IL1B,LIPT1,ZNF513,COA5,CLEC4F,PPP3R1,BRE,C2orf15,RAB6C,DOK1,PLGLA,GPR45,MIR4780,TMEM131,CBWD2,TSPYL6,LOC388946,CLIP4,C2orf42,SNRPG,LOC654433,LOC100505624,PTPN18,C2orf71,POMC,EML6,KIF3C,WASH2P,LOC150776,GTF3C2,WDR43,MEMO1,ETAA1,TRIM43,MRPL53,CAPN13,MIR4264,TIA1,SPTBN1,CENPO,C2orf55,FLJ12334,HS1BP3,COMMD1,IL1RN,LOC285033,ANKRD36B,LOC440894,PRADC1,C2orf68,TCF7L1,TMEM37,ATP6V1E2,SIX2,REG1B,CYP26B1,PREPL,WDR35,PAX8,OST4,CGREF1,PELI1,REL,POTEF,ZC3H8,KLHL29,DHX57,C2orf40,CNTNAP5,C2orf44,TGFBRAP1,PRKCE,LRPPRC,SLC35F5,FBXO48,GPR113,SUCLG1,LOC100288911,NCAPH,WDR92,TACR1,MARCO,MIR216A,CALM2,BUB1,ANKRD53,SLC4A1AP,DDX11L2,LOC100134259,FANCL,ACYP2,ITSN2,DNMT3A,PROM2,LYG2,LOC100287216,GPR75-ASB3,PCYOX1,MAP4K4,PNO1,LOC151534,YIPF4,PREB,ANAPC1,EMX1,REEP1,GPN1,PRORSD1P,ZNF514,WDPCP,KDM3A,NAT8,KCMF1,YPEL5,C2orf27A,LIMS1,EDAR,DYNC2LI1,LOC339807,SEPT10,FUNDC2P2,EHD3,SLC9A4,RAB10,FAM179A,HEATR5B,IL37,OXER1,SOWAHC,AFTPH,LOC389033,LOC729234,DNAH6,TET3,SMYD1,RGPD8,UGP2,LOC442028,STRN,CFC1B,LTBP1,FNDC4,MIR3682,MYO7B,ZC3H6,SNX17,TGFA,C2orf56,TPRKB,TMEM17,SAP130,FBXO11,AMMECR1L,RFX8,EIF2AK3,GNLY,PLB1,MSGN1,SLC3A1,TMEM182,C2orf29,LINC00486,FAM59B,PTPN4,CNNM4,RTN4,ACTR3,MITD1,LOC645949,IL1RL1,PPM1G,ASB3,INO80B-WBP1,CNRIP1,XDH,LBH,IL36RN,SLC8A1,PROC,LINC00152,KHK,EN1,NCOA1,FAM82A1,KCNK3,FAM136A,FER1L5,PSD4,SNORD89,SLC4A5,MPV17,SDC1,SPAST,VSNL1,ERLEC1,MIR216B,SRBD1,APLF,CCDC93,LOC84931,CCDC121,C2orf43,SFT2D3,DTNB,RGPD3,TTL,FHL2,LOC100133985,SOS1,TP53I3,RAB11FIP5,ARHGAP25,MTHFD2,BOLA3-AS1,KCNG3,EIF2AK2,DPP10,CYP1B1,C2orf70,TTC27,SNRNP200,PSME4,FAHD2A,MCFD2	IMR90	Hi-C	24141950	GPR39	141870	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	133111183	133111270	133111216	Y	NA	NA	NA	NA	NA	NA	GPR39	60877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	133433715	133433886	133433800	Y	NA	NA	NA	NA	NA	NA	GPR39	261568	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	134878523	134878632	134878609	Y	MGAT5	MGAT5	NA	NA	NA	NA	MGAT5	2969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	134878887	134879265	134878997	Y	NA	MGAT5	NA	NA	NA	NA	MGAT5	3333	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	135020271	135020560	135020365	Y	MGAT5	NA	NA	NA	NA	NA	MGAT5	144717	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	135054765	135054954	135054860	Y	MGAT5	NA	NA	NA	NA	NA	MGAT5	179211	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	135062328	135062641	135062375	Y	NA	NA	NA	NA	NA	NA	MGAT5	186774	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	135437323	135437554	135437491	Y	TMEM163	TMEM163	NA	NA	NA	NA	TMEM163	37016	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	136337488	136337852	136337670	Y	NA	NA	NA	NA	NA	NA	R3HDM1	50463	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	136504457	136504522	136504461	Y	NA	UBXN4	NA	NA	NA	NA	UBXN4	7268	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	136632932	136633416	136633308	Y	UBXN4,CXCR4,CXCR4	MCM6	NA	NA	NA	NA	MCM6	936	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	136720209	136720558	136720339	Y	NA	AC093391.2,DARS	NA	NA	NA	NA	AC093391.2	20188	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	136887149	136887816	136887360	Y	UBXN4,CXCR4,CXCR4	CXCR4	CXCR4	K562	ChIA-PET	22265404	CXCR4	13414	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	138765071	138765376	138765123	Y	NA	NA	NA	NA	NA	NA	AC097721.2	491892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	142150307	142150490	142150399	Y	NA	NA	NA	NA	NA	NA	LRP1B	736780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	142343061	142343470	142343446	Y	NA	NA	NA	NA	NA	NA	LRP1B	543800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	142404808	142405288	142404942	Y	NA	NA	NA	NA	NA	NA	LRP1B	481982	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	142886868	142887183	142887052	Y	LRP1B	LRP1B	NA	NA	NA	NA	LRP1B	87	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	143960130	143960313	143960221	Y	NA	NA	NA	NA	NA	NA	LRP1B	1072860	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	144769205	144769351	144769311	Y	GTDC1,GTDC1	NA	NA	NA	NA	NA	GTDC1	318784	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	145214152	145214623	145214350	Y	GTDC1,GTDC1,ZEB2	NA	NA	NA	NA	NA	ZEB2	65524	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	145866626	145866907	145866723	Y	NA	NA	NA	NA	NA	NA	RPL6P5	225891	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	145942500	145942836	145942668	Y	NA	NA	ZEB2	IMR90	Hi-C	24141950	RPL6P5	149962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	146510109	146510425	146510227	Y	NA	NA	DKFZp686O1327,ZEB2	IMR90	Hi-C	24141950	RPL6P5	417311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	147189297	147189317	147189307	Y	NA	NA	NA	NA	NA	NA	RPL6P5	1096499	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	148671388	148671433	148671412	Y	ORC4,ORC4,ORC4,ORC4,ORC4	NA	NA	NA	NA	NA	ACVR2A	71302	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	149633974	149634183	149633979	Y	NA	KIF5C	NA	NA	NA	NA	KIF5C	3155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	149645940	149646152	149646140	Y	KIF5C	KIF5C	NA	NA	NA	NA	KIF5C	15121	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	149838827	149839058	149838917	Y	KIF5C	NA	NA	NA	NA	NA	LYPD6B	53563	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	149859329	149859655	149859426	Y	NA	LYPD6B	NA	NA	NA	NA	LYPD6B	32966	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	150314581	150314916	150314749	Y	NA	NA	NA	NA	NA	NA	AC144449.1	126794	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	152896580	152896660	152896620	Y	NA	NA	NA	NA	NA	NA	STAM2	133846	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	152930991	152931406	152931212	Y	NA	NA	NA	NA	NA	NA	STAM2	99100	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	154335936	154336181	154336134	Y	RPRM	RPRM	NA	NA	NA	NA	RPRM	2614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	155556801	155556983	155556830	Y	NA	KCNJ3	NA	NA	NA	NA	KCNJ3	3990	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	155558133	155558529	155558331	Y	KCNJ3	KCNJ3	NA	NA	NA	NA	KCNJ3	5322	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	155569761	155570004	155569789	Y	NA	KCNJ3	NA	NA	NA	NA	KCNJ3	16950	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	156002242	156002543	156002420	Y	KCNJ3	NA	NA	NA	NA	NA	KCNJ3	449431	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	157190328	157191531	157191235	Y	GPD2,NR4A2	NR4A2	GPD2	IMR90	Hi-C	24141950	NR4A2	5329	CAGE	JHUCS-1	hg19	FANTOM5	2.49964832114774
chr2	157191997	157192231	157192220	Y	GPD2,NR4A2	NR4A2	GPD2	IMR90	Hi-C	24141950	NR4A2	4629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	157350071	157350391	157350185	Y	NA	NA	NA	NA	NA	NA	GPD2	60269	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	158658740	158658947	158658861	Y	NA	NA	NA	NA	NA	NA	ACVR1	71427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	159354074	159354382	159354127	Y	NA	PKP4	NA	NA	NA	NA	PKP4	42598	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	159853491	159853713	159853657	Y	NA	TANC1	NA	NA	NA	NA	TANC1	30345	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	159994086	159994676	159994284	Y	NA	NA	NA	NA	NA	NA	WDSUB1	146634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	160013990	160014170	160014100	Y	NA	NA	NA	NA	NA	NA	WDSUB1	127140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	160100045	160100277	160100255	Y	NA	WDSUB1	NA	NA	NA	NA	WDSUB1	41033	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	160470388	160470776	160470715	Y	NA	AC009506.1,BAZ2B	NA	NA	NA	NA	BAZ2B	427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	161995122	161995254	161995230	Y	TANK,TANK	TANK	NA	NA	NA	NA	TANK	3703	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	162094289	162094955	162094372	Y	NA	NA	NA	NA	NA	NA	PSMD14	67594	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	162095171	162095411	162095272	Y	TBR1,SLC4A10	NA	NA	NA	NA	NA	PSMD14	67138	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr2	162197345	162197490	162197464	Y	NA	PSMD14,AC009299.5	NA	NA	NA	NA	AC009299.5	1508	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	163222658	163222682	163222670	Y	GCA	IFIH1,GCA	NA	NA	NA	NA	GCA	49308	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	163222961	163223077	163223019	Y	KCNH7,GCA	IFIH1,GCA	NA	NA	NA	NA	GCA	49611	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	163335481	163335638	163335560	Y	NA	NA	NA	NA	NA	NA	GCA	162131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	163376672	163376691	163376681	Y	NA	NA	NA	NA	NA	NA	GCA	203322	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	163477809	163478160	163477991	Y	KCNH7	NA	NA	NA	NA	NA	KCNH7	215080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	163578974	163579343	163579088	Y	KCNH7	NA	NA	NA	NA	NA	KCNH7	113897	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	163604975	163605274	163605125	Y	NA	NA	NA	NA	NA	NA	KCNH7	87966	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	163695900	163696326	163696258	Y	NA	KCNH7	NA	NA	NA	NA	KCNH7	2660	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	164534395	164534690	164534543	Y	FIGN	NA	NA	NA	NA	NA	FIGN	55832	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	165643142	165643316	165643229	Y	NA	NA	NA	NA	NA	NA	AC019181.2	51943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	165683192	165683287	165683237	Y	NA	AC019181.2,COBLL1	NA	NA	NA	NA	AC019181.2	11972	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	165924693	165924835	165924764	Y	SCN3A,SCN2A,SCN2A,CSRNP3	NA	NA	NA	NA	NA	SCN3A	133742	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	166491383	166491530	166491513	Y	NA	NA	NA	NA	NA	NA	CSRNP3	167226	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	166523404	166523752	166523720	Y	NA	NA	NA	NA	NA	NA	CSRNP3	199247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	166555238	166555468	166555315	Y	CSRNP3	NA	NA	NA	NA	NA	CSRNP3	231081	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	166705742	166705996	166705870	Y	NA	NA	NA	NA	NA	NA	TTC21B	102357	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	166734901	166734996	166734949	Y	NA	NA	NA	NA	NA	NA	TTC21B	73357	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	166983519	166983786	166983732	Y	NA	NA	NA	NA	NA	NA	TTC21B	175166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	168263159	168263570	168263327	Y	NA	NA	NA	NA	NA	NA	AC074363.1	115478	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	169409032	169409398	169409117	Y	NA	NA	NA	NA	NA	NA	CERS6	98660	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	169434382	169434732	169434541	Y	NA	NA	NA	NA	NA	NA	CERS6	124010	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	170684911	170685465	170685124	Y	PPIG,C2orf77,PHOSPHO2,UBR3	SSB,METTL5,UBR3	NA	NA	NA	NA	UBR3	2943	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	170856738	170857087	170856755	Y	NA	NA	NA	NA	NA	NA	UBR3	174770	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	171786835	171787228	171786978	Y	TLK1	GORASP2	NA	NA	NA	NA	GORASP2	3861	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	171830049	171830396	171830113	Y	NA	GORASP2	NA	NA	NA	NA	GORASP2	47075	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	171997679	171997950	171997833	Y	NA	NA	NA	NA	NA	NA	TLK1	87874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	172628972	172629294	172629196	Y	NA	NA	NA	NA	NA	NA	DYNC1I2	87053	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	172961367	172961608	172961457	Y	DLX1,DLX2	DLX1,DLX2	NA	NA	NA	NA	DLX2	4020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	172962291	172962684	172962615	Y	NA	DLX1,DLX2	NA	NA	NA	NA	DLX2	2944	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	173316258	173316587	173316571	Y	NA	ITGA6	NA	NA	NA	NA	ITGA6	26176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	173876038	173876102	173876070	Y	NA	NA	NA	NA	NA	NA	RAPGEF4	278036	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	174800246	174800560	174800554	Y	NA	SP3	NA	NA	NA	NA	SP3	27870	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	174889919	174890381	174890067	Y	NA	NA	SP3,OLA1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SP3	61489	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	175069870	175070170	175070019	Y	WIPF1,SP3,SP3	OLA1	NA	NA	NA	NA	OLA1	41256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	175085975	175086128	175086062	Y	NA	OLA1	NA	NA	NA	NA	OLA1	25298	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	175519164	175519290	175519227	Y	NA	WIPF1	NA	NA	NA	NA	WIPF1	26354	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	175540530	175540594	175540562	Y	CIR1,GPR155,WIPF1,WIPF1	WIPF1,H3F3AP4	NA	NA	NA	NA	WIPF1	5050	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	175700542	175700958	175700833	Y	CHRNA1	NA	NA	NA	NA	NA	H3F3AP4	118037	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	175708423	175708587	175708507	Y	NA	NA	NA	NA	NA	NA	H3F3AP4	125918	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	175762241	175762347	175762322	Y	NA	NA	NA	NA	NA	NA	CHN1	105750	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	175837054	175837318	175837218	Y	NA	CHN1	NA	NA	NA	NA	CHN1	30779	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	176846427	176846539	176846507	Y	NA	KIAA1715	NA	NA	NA	NA	KIAA1715	19028	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	178100990	178101571	178101482	Y	NA	HNRNPA3,AC079305.8,MIR3128,AC079305.10	NA	NA	NA	NA	MIR3128	17167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	178104644	178105169	178104872	Y	NFE2L2,NFE2L2,HNRNPA3	HNRNPA3,AC079305.8,MIR3128,AC079305.10	NA	NA	NA	NA	MIR3128	13569	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	178176683	178176989	178176836	Y	NA	AC079305.10	NA	NA	NA	NA	AC079305.10	49596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	179083118	179083236	179083178	Y	OSBPL6	OSBPL6	NA	NA	NA	NA	OSBPL6	25910	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	180006156	180006503	180006499	Y	NA	NA	NA	NA	NA	NA	SESTD1	121014	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	180098781	180098979	180098880	Y	NA	SESTD1	NA	NA	NA	NA	SESTD1	28538	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	180123713	180123938	180123827	Y	NA	SESTD1	NA	NA	NA	NA	SESTD1	3579	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	180585338	180585678	180585637	Y	ZNF385B,ZNF385B	NA	NA	NA	NA	NA	CWC22	284162	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	181739754	181740031	181739816	Y	NA	FTH1P20	NA	NA	NA	NA	FTH1P20	3613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	182325728	182326230	182325819	Y	ITGA4	ITGA4	NA	NA	NA	NA	ITGA4	5799	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	183876955	183877317	183877185	Y	NA	NCKAP1	NA	NA	NA	NA	NCKAP1	24269	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	183877830	183878146	183878099	Y	NA	NCKAP1	NA	NA	NA	NA	NCKAP1	23440	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	186616540	186616923	186616825	Y	NA	NA	NA	NA	NA	NA	ZC3H15	731960	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	186785756	186786079	186786020	Y	NA	NA	NA	NA	NA	NA	ZC3H15	562804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	187015061	187015446	187015349	Y	NA	NA	NA	NA	NA	NA	ZC3H15	333437	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	187390995	187391341	187391159	Y	NA	ZC3H15	NA	NA	NA	NA	ZC3H15	42112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	187601377	187601405	187601389	Y	ZSWIM2,FAM171B	FAM171B	NA	NA	NA	NA	FAM171B	44679	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	187814778	187815134	187814833	Y	NA	NA	CALCRL	IMR90	Hi-C	24141950	FAM171B	258080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	188389811	188390126	188390006	Y	NA	TFPI	NA	NA	NA	NA	TFPI	38361	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	189168145	189168606	189168510	Y	NA	GULP1	NA	NA	NA	NA	GULP1	13749	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	189391407	189391613	189391501	Y	GULP1	NA	NA	NA	NA	NA	GULP1	237011	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	190324760	190324912	190324838	Y	NA	WDR75	NA	NA	NA	NA	WDR75	20601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191075616	191075973	191075872	Y	NA	NA	NA	NA	NA	NA	INPP1	130223	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	191377806	191377826	191377816	Y	NA	TMEM194B	NA	NA	NA	NA	TMEM194B	19622	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191406346	191406617	191406448	Y	NA	TMEM194B	INPP1	IMR90	Hi-C	24141950	TMEM194B	8898	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191447882	191447975	191447929	Y	NA	NA	TMEM194B,NAB1	IMR90	Hi-C	24141950	TMEM194B	50434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191492626	191492865	191492683	Y	INPP1,STAT1,NAB1	NAB1	MFSD6	IMR90	Hi-C	24141950	NAB1	16607	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191815156	191815612	191815322	Y	GLS	AC067945.3	NA	NA	NA	NA	AC067945.3	40681	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	191876125	191876480	191876302	Y	NA	AC067945.3,STAT1	NA	NA	NA	NA	STAT1	7206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191921929	191922344	191922217	Y	STAT4	STAT1	NA	NA	NA	NA	STAT1	38243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	191964609	191964909	191964759	Y	NAB1,GLS,STAT1,STAT4	STAT4	NA	NA	NA	NA	STAT4	49413	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	192170125	192170408	192170266	Y	NA	NA	NA	NA	NA	NA	MYO1B	62214	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	192621580	192621916	192621762	Y	NA	NA	TMEFF2	IMR90	Hi-C	24141950	SDPR	88065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	192966910	192967316	192967133	Y	TMEFF2	NA	NA	NA	NA	NA	TMEFF2	91119	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	193013468	193013788	193013628	Y	NA	TMEFF2	NA	NA	NA	NA	TMEFF2	44647	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	194142383	194142416	194142400	Y	NA	NA	NA	NA	NA	NA	TMEFF2	1083948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	194838514	194838698	194838568	Y	NA	NA	NA	NA	NA	NA	SLC39A10	1600003	CAGE	JHUCS-1	hg19	FANTOM5	4.33272375665609
chr2	196515239	196515508	196515373	Y	NA	NA	SLC39A10	MCF7	ChIA-PET	22265404	SLC39A10	76538	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	196531201	196531576	196531334	Y	NA	NA	NA	NA	NA	NA	SLC39A10	92500	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	197271750	197271952	197271866	Y	HECW2	NA	NA	NA	NA	NA	HECW2	184464	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	197327086	197327270	197327178	Y	NA	NA	NA	NA	NA	NA	HECW2	129146	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	197420372	197420700	197420626	Y	NA	HECW2	NA	NA	NA	NA	HECW2	35716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	197779870	197780287	197779995	Y	NA	PGAP1	NA	NA	NA	NA	PGAP1	10233	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	197787148	197787421	197787192	Y	NA	PGAP1	NA	NA	NA	NA	PGAP1	3099	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	197936511	197936873	197936784	Y	NA	NA	NA	NA	NA	NA	PGAP1	145991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	197962665	197962866	197962743	Y	NA	NA	NA	NA	NA	NA	ATP5G2P3	162969	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	198081229	198081750	198081370	Y	MARS2,HSPD1,HSPD1	ATP5G2P3	NA	NA	NA	NA	ATP5G2P3	44085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	198144443	198144693	198144592	Y	NA	ATP5G2P3,ANKRD44	NA	NA	NA	NA	ATP5G2P3	18608	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	200454883	200455188	200455056	Y	NA	NA	NA	NA	NA	NA	SATB2	120894	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	200800298	200800427	200800328	Y	SATB2,SATB2,SATB2,TYW5,C2orf69	C2orf69,C2orf47,TYW5	NA	NA	NA	NA	C2orf47	17613	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	201172384	201172536	201172446	Y	NA	SPATS2L	NA	NA	NA	NA	SPATS2L	3780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	201289842	201289940	201289893	Y	NA	NA	NA	NA	NA	NA	SGOL2	82791	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	201411222	201411458	201411252	Y	PPIL3,NIF3L1,NIF3L1,SGOL2	SGOL2,KCTD18,AOX1	NA	NA	NA	NA	KCTD18	28715	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	201991403	201992374	201991715	Y	BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10	AC007272.3,CFLAR	NA	NA	NA	NA	CFLAR	12576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	201992378	201992654	201992500	Y	BZW1,BZW1,BZW1,CLK1,CLK1,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10	AC007272.3,CFLAR	NA	NA	NA	NA	CFLAR	13551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	202078581	202078959	202078777	Y	CASP10	NA	NA	NA	NA	NA	CFLAR	99754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	202079360	202079680	202079556	Y	CLK1,CLK1,CFLAR,CASP10	NA	NA	NA	NA	NA	CFLAR	100533	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	202100663	202100910	202100770	Y	NA	NA	NA	NA	NA	NA	CFLAR	121836	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	202204679	202205066	202204873	Y	NA	STRADB	NA	NA	NA	NA	STRADB	45515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	202302698	202302857	202302778	Y	FAM126B,CFLAR,CFLAR,CFLAR	TRAK2	NA	NA	NA	NA	TRAK2	11445	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	202752724	202752776	202752749	Y	ALS2	NA	NA	NA	NA	NA	ALS2	108812	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	202898182	202898685	202898353	Y	TMEM237,FZD7	NA	NA	NA	NA	NA	PSMA2P3	143335	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr2	203090268	203090335	203090273	Y	NA	PSMA2P3,DAZAP2P1,SUMO1,NOP58	NA	NA	NA	NA	SUMO1	10996	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	203131534	203131826	203131673	Y	FAM117B,NOP58	SUMO1,NOP58	NA	NA	NA	NA	NOP58	3095	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	203159775	203160145	203159798	Y	NA	NOP58	NA	NA	NA	NA	NOP58	31336	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	203231501	203231745	203231624	Y	NA	BMPR2	BMPR2,NOP58	IMR90	Hi-C	24141950	BMPR2	7914	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	203239784	203239912	203239798	Y	NA	BMPR2	NA	NA	NA	NA	BMPR2	125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	203292079	203292309	203292231	Y	NA	NA	NA	NA	NA	NA	BMPR2	52420	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	204288063	204288423	204288243	Y	NA	NA	NA	NA	NA	NA	ABI2	97121	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	204311629	204311925	204311741	Y	NBEAL1,CYP20A1,ABI2	NA	NA	NA	NA	NA	RAPH1	86208	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	206005178	206005232	206005204	Y	NA	NA	NA	NA	NA	NA	NRP2	539482	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	206948392	206948813	206948647	Y	NA	AC007383.3,INO80D	NA	NA	NA	NA	INO80D	214	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	208028732	208029438	208029179	Y	METTL21A,CREB1,KLF7	KLF7	NA	NA	NA	NA	KLF7	553	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	208175027	208175372	208175141	Y	NA	NA	KLF7,CREB1	IMR90	Hi-C	24141950	KLF7	145036	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	208395422	208395980	208395659	Y	PLEKHM3,METTL21A,METTL21A,CREB1	CREB1,AC007879.5	NA	NA	NA	NA	AC007879.5	2903	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	208472249	208472458	208472354	Y	NA	METTL21A	NA	NA	NA	NA	METTL21A	16194	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	208609048	208609450	208609191	Y	NA	CCNYL1,FZD5	NA	NA	NA	NA	FZD5	22837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	210377827	210378108	210377968	Y	NA	NA	NA	NA	NA	NA	MAP2	91045	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	210429278	210429418	210429290	Y	MAP2,MAP2	NA	NA	NA	NA	NA	MAP2	142496	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	210442932	210443275	210443104	Y	NA	NA	NA	NA	NA	NA	MAP2	156150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	210547424	210547820	210547680	Y	MAP2,MAP2,UNC80	NA	NA	NA	NA	NA	UNC80	86897	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	210580281	210580584	210580403	Y	NA	NA	NA	NA	NA	NA	UNC80	54133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	211032670	211033036	211032982	Y	NA	AC006994.2	NA	NA	NA	NA	AC006994.2	1206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	211338817	211338914	211338866	Y	NA	LANCL1	NA	NA	NA	NA	LANCL1	1462	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	211404935	211405006	211404955	Y	CPS1	NA	NA	NA	NA	NA	LANCL1	64559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	213401643	213402097	213401658	Y	NA	ERBB4	NA	NA	NA	NA	ERBB4	78	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	215554872	215555197	215555035	Y	NA	ENSAP3	NA	NA	NA	NA	ENSAP3	5254	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	216164232	216164517	216164455	Y	NA	ATIC	NA	NA	NA	NA	ATIC	10023	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	216216233	216216482	216216439	Y	NA	ATIC	NA	NA	NA	NA	ATIC	41693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	216216979	216217372	216217176	Y	NA	ATIC	NA	NA	NA	NA	ATIC	42439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	216222058	216222324	216222191	Y	FN1	ATIC	NA	NA	NA	NA	ATIC	47518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	216223263	216223304	216223303	Y	NA	ATIC	NA	NA	NA	NA	ATIC	48723	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	216865894	216866240	216866102	Y	TMEM169,PECR,MREG	MREG	NA	NA	NA	NA	MREG	30579	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	217414791	217414849	217414821	Y	IGFBP2	NA	DIRC3,IGFBP2,RPL37A,IGFBP5	IMR90	Hi-C	24141950	AC098820.3	53307	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	217556283	217557311	217557110	Y	NA	IGFBP5	NA	NA	NA	NA	IGFBP5	937	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	218701196	218701490	218701305	Y	NA	NA	NA	NA	NA	NA	DIRC3	81880	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	219177286	219177625	219177456	Y	NA	AAMP,PNKD,TMBIM1,AC021016.7	NA	NA	NA	NA	TMBIM1	21977	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	219270976	219271406	219271230	Y	CXCR2,CXCR2,CXCR1,ZNF142,USP37,TTLL4,SLC11A1	CTDSP1	NA	NA	NA	NA	CTDSP1	9997	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	219271996	219272374	219272308	Y	USP37	CTDSP1	NA	NA	NA	NA	CTDSP1	11017	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	219773515	219774011	219773826	Y	USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A	CDK5R2	NA	NA	NA	NA	CDK5R2	48366	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	219827943	219828258	219828078	Y	USP37,STK36,PTPRN,PTPRN,CDK5R2,FEV	CDK5R2,FEV	NA	NA	NA	NA	CDK5R2	5566	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr2	220374836	220375176	220374958	Y	NA	GMPPA,TMEM198,CHPF	NA	NA	NA	NA	GMPPA	13247	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	220385870	220386219	220385945	Y	ACCN4	GMPPA,TMEM198,CHPF,OBSL1	NA	NA	NA	NA	TMEM198	20166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	222435699	222436339	222436058	Y	EPHA4	EPHA4	NA	NA	NA	NA	EPHA4	583	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	222826690	222827411	222827014	Y	NA	NA	EPHA4	IMR90	Hi-C	24141950	EPHA4	389768	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	223429708	223429962	223429836	Y	FARSB	NA	NA	NA	NA	NA	FARSB	89094	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	223447202	223447309	223447256	Y	NA	NA	NA	NA	NA	NA	FARSB	71747	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	223462160	223462364	223462326	Y	NA	NA	NA	NA	NA	NA	FARSB	56692	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	223757137	223757389	223757313	Y	NA	ACSL3	NA	NA	NA	NA	ACSL3	33485	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	224569350	224569680	224569515	Y	NA	NA	AP1S3	IMR90	Hi-C	24141950	SCG2	104129	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	224773224	224773437	224773430	Y	WDFY1	WDFY1,MRPL44	NA	NA	NA	NA	WDFY1	34667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225147507	225147511	225147509	Y	NA	NA	SERPINE2,WDFY1,AP1S3	IMR90	Hi-C	24141950	SERPINE2	245471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225307433	225307612	225307516	Y	FAM124B	NA	FAM124B,CUL3,SERPINE2	IMR90	Hi-C	24141950	CUL3	140498	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225340678	225341017	225340847	Y	NA	NA	NA	NA	NA	NA	CUL3	107093	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225734569	225734902	225734735	Y	NA	NA	NA	NA	NA	NA	DOCK10	170260	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225782519	225782936	225782741	Y	DOCK10	NA	NA	NA	NA	NA	DOCK10	122226	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225792499	225793034	225792841	Y	CUL3,DOCK10	NA	NA	NA	NA	NA	DOCK10	112128	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225841174	225841410	225841405	Y	NA	NA	NA	NA	NA	NA	DOCK10	63752	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	225875465	225875930	225875836	Y	DOCK10	DOCK10	NA	NA	NA	NA	DOCK10	29232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	225878647	225879031	225878803	Y	DOCK10	DOCK10	NA	NA	NA	NA	DOCK10	26131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	227032212	227032233	227032223	Y	NA	NA	NA	NA	NA	NA	IRS1	630242	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	227580904	227581301	227581103	Y	NA	NA	NA	NA	NA	NA	IRS1	81174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	227656309	227656561	227656437	Y	NA	IRS1,RHBDD1	NA	NA	NA	NA	IRS1	5914	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	228576764	228576787	228576777	Y	NA	NA	NA	NA	NA	NA	AGFG1	241896	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	230309727	230309993	230309861	Y	TRIP12,PID1	NA	NA	NA	NA	NA	PID1	175726	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	230736228	230736612	230736477	Y	SP110	FBXO36,TRIP12	NA	NA	NA	NA	FBXO36	48406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	231276384	231276790	231276706	Y	NA	SP100	NA	NA	NA	NA	SP100	1867	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	231649547	231649844	231649697	Y	NA	NA	NA	NA	NA	NA	BANF1P3	61429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	231822084	231822525	231822233	Y	GPR55	NA	NA	NA	NA	NA	C2orf72	77680	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	232207003	232207399	232207160	Y	NA	NA	NA	NA	NA	NA	B3GNT7	50855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	232277113	232277443	232277206	Y	C2orf72	B3GNT7,SNORD82	NA	NA	NA	NA	B3GNT7	18859	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	232468888	232470128	232469532	Y	DIS3L2,PTMA,NMUR1	NA	NA	NA	NA	NA	NMUR1	75682	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr2	232478392	232478857	232478528	Y	DIS3L2,PTMA	NA	NA	NA	NA	NA	NMUR1	85186	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	232478879	232479328	232479053	Y	NA	NA	NA	NA	NA	NA	NMUR1	85673	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	232526700	232527324	232527119	Y	DIS3L2	PTMA	COPS7B,PTMA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTMA	42281	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	232530920	232531416	232531295	Y	NA	PTMA	COPS7B,PTMA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTMA	38189	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	232531704	232531853	232531745	Y	NA	PTMA	COPS7B,PTMA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTMA	37752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	232545684	232546083	232545868	Y	COPS7B	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	23522	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	232547138	232547293	232547212	Y	PTMA	PTMA	PTMA,PDE6D	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	PTMA	22312	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	233181304	233181393	233181324	Y	NA	NA	NA	NA	NA	NA	EIF4E2	231369	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	233367792	233368150	233367876	Y	ALPP,GIGYF2,ALPI,ECEL1,PRSS56,TIGD1	EIF4E2,TIGD1	MIR1471,ECEL1P2	IMR90	Hi-C	24141950	EIF4E2	44612	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	233563344	233563704	233563468	Y	NA	GIGYF2	NA	NA	NA	NA	GIGYF2	3335	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	234630754	234630813	234630784	Y	NA	NA	NA	NA	NA	NA	HJURP	130399	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	236514356	236514561	236514454	Y	NA	NA	NA	NA	NA	NA	AGAP1	113623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	236547901	236548387	236548201	Y	NA	NA	NA	NA	NA	NA	AGAP1	147168	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	236552972	236553189	236553098	Y	NA	NA	NA	NA	NA	NA	AGAP1	152239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	236663549	236663825	236663687	Y	NA	NA	NA	NA	NA	NA	AGAP1	262816	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	236698901	236699175	236699041	Y	NA	NA	NA	NA	NA	NA	AGAP1	298168	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	237073092	237073409	237073337	Y	NA	AC079135.1,GBX2	NA	NA	NA	NA	AC079135.1	681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	237341356	237341565	237341461	Y	NA	NA	NA	NA	NA	NA	GBX2	266344	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	237482983	237483115	237483021	Y	NA	NA	NA	NA	NA	NA	GBX2	407971	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	237880182	237880685	237880333	Y	NA	NA	IQCA1,CXCR7	IMR90	Hi-C	24141950	COPS8	111270	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238016795	238017153	238016975	Y	NA	COPS8,AC105760.2	NA	NA	NA	NA	AC105760.2	24335	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238018538	238018666	238018550	Y	NA	COPS8,AC105760.2	NA	NA	NA	NA	AC105760.2	26078	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238038460	238038824	238038818	Y	NA	COPS8,AC105760.2	COPS8,COL6A3,MLPH,PRLH,RAB17,LRRFIP1	IMR90	Hi-C	24141950	AC105760.2	46000	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238188791	238189175	238189021	Y	COL6A3	NA	MLPH,COL6A3,COPS8	IMR90	Hi-C	24141950	COL6A3	131843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238383141	238383356	238383272	Y	NA	MLPH	LRRFIP1,MLPH,COL6A3,RAB17,COPS8,PRLH	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MLPH	8715	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr2	238421741	238422134	238421894	Y	MLPH	MLPH	NA	NA	NA	NA	MLPH	29670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238583352	238583931	238583637	Y	UBE2F,LRRFIP1	LRRFIP1	NA	NA	NA	NA	LRRFIP1	49133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	238968617	238969014	238968782	Y	NA	SCLY,ESPNL	NA	NA	NA	NA	SCLY	1087	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	239080379	239080669	239080523	Y	NA	KLHL30,FAM132B,ILKAP	NA	NA	NA	NA	FAM132B	14756	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	239085902	239086198	239086162	Y	NA	KLHL30,FAM132B,ILKAP	NA	NA	NA	NA	FAM132B	20279	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	239129575	239129683	239129630	Y	NA	ILKAP,HES6	NA	NA	NA	NA	HES6	17620	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	239287999	239288325	239288245	Y	NA	ASB1	NA	NA	NA	NA	ASB1	45058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240080723	240081253	240081085	Y	NA	NA	NA	NA	NA	NA	AC062017.1	239877	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr2	240144176	240144295	240144274	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	176835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240196255	240196671	240196554	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	124459	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240196933	240197336	240197049	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	123794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240210840	240211190	240211015	Y	NA	NA	NA	NA	NA	NA	AC062017.1	109940	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240250439	240250711	240250592	Y	NA	NA	NA	NA	NA	NA	AC062017.1	70419	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	240266359	240266553	240266475	Y	NA	NA	NA	NA	NA	NA	AC062017.1	54577	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240267449	240267666	240267577	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	53464	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr2	240362327	240362618	240362447	Y	HDAC4	AC062017.1,HDAC4	HDAC4,NDUFA10	IMR90	Hi-C	24141950	HDAC4	40979	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	240920223	240920529	240920311	Y	NA	NDUFA10	NA	NA	NA	NA	NDUFA10	42290	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	241519364	241519647	241519506	Y	NA	DUSP28,RNPEPL1,ANKMY1,CAPN10	NA	NA	NA	NA	CAPN10	4486	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	241718828	241719056	241718959	Y	NA	KIF1A	NA	NA	NA	NA	KIF1A	38669	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	241719064	241719393	241719333	Y	KIF1A	KIF1A	NA	NA	NA	NA	KIF1A	38332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	241719463	241720148	241720097	Y	ANKMY1,AQP12B,AQP12A,KIF1A	KIF1A	NA	NA	NA	NA	KIF1A	37577	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr2	241771658	241772038	241771862	Y	KIF1A	KIF1A	ANKMY1,RNPEPL1,CAPN10,KIF1A,C2orf54,SNED1,PASK,HDLBP,ANO7,PPP1R7	IMR90	Hi-C	24141950	KIF1A	13933	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	242262018	242262304	242262161	Y	NA	SEPT2,HDLBP,FARP2	NA	NA	NA	NA	HDLBP	7542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	242300434	242300614	242300524	Y	NA	SEPT2,HDLBP,FARP2	NA	NA	NA	NA	FARP2	6776	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	242304310	242304654	242304483	Y	FARP2	HDLBP,FARP2	NA	NA	NA	NA	FARP2	10652	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr2	242365047	242365293	242365170	Y	NA	NA	NA	NA	NA	NA	FARP2	71389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	242549642	242550327	242549774	Y	ATG4B	ATG4B,THAP4	NA	NA	NA	NA	ATG4B	24301	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	242702443	242702859	242702736	Y	ATG4B,PDCD1,D2HGDH	D2HGDH	NA	NA	NA	NA	D2HGDH	30449	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	242728014	242728394	242728206	Y	ATG4B	NA	NA	NA	NA	NA	D2HGDH	56020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr2	242801923	242802843	242802016	Y	NA	AC131097.3	NA	NA	NA	NA	AC131097.3	18671	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	290672	290826	290757	Y	SOX12,NRSN2	C20orf96,ZCCHC3,AL034548.1,SOX12,NRSN2,RP5-1103G7.4	NA	NA	NA	NA	SOX12	13381	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	290991	291448	291293	Y	C20orf54	C20orf96,ZCCHC3,AL034548.1,SOX12,NRSN2,RP5-1103G7.4	NA	NA	NA	NA	SOX12	12759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	478652	479003	478850	Y	NA	TBC1D20,CSNK2A1	NA	NA	NA	NA	TBC1D20	37455	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	1097798	1098000	1097899	Y	NA	PSMF1	NA	NA	NA	NA	PSMF1	5892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	1168274	1168908	1168417	Y	NA	TMEM74B	NA	NA	NA	NA	TMEM74B	4215	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	1258531	1258969	1258603	Y	NA	SNPH	FKBP1A-SDCBP2,LOC100507495	IMR90	Hi-C	24141950	SNPH	13571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	1372355	1372517	1372472	Y	NA	FKBP1A	NA	NA	NA	NA	FKBP1A	549	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	1372569	1372994	1372930	Y	PSMF1,SDCBP2,SIRPB2,SIRPB1	FKBP1A	NA	NA	NA	NA	FKBP1A	763	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	1415597	1415981	1415837	Y	NA	FKBP1A,NSFL1C	FKBP1A-SDCBP2	IMR90	Hi-C	24141950	NSFL1C	36506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	1757792	1758093	1758078	Y	NA	NA	NA	NA	NA	NA	SIRPA	115061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	1873360	1873375	1873370	Y	NA	SIRPA	NA	NA	NA	NA	SIRPA	206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	2648841	2649036	2648938	Y	NA	NOP56,SNORD110,SNORD86,SNORD57,IDH3B,RP4-686C3.7,EBF4	EBF4	IMR90	Hi-C	24141950	RP4-686C3.7	5843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	2771027	2771047	2771039	Y	NA	CPXM1,VPS16	NA	NA	NA	NA	CPXM1	8236	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	2855066	2855678	2855300	Y	NA	VPS16,PTPRA	NA	NA	NA	NA	PTPRA	12236	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	3156363	3156554	3156472	Y	EBF4,PTPRA,PTPRA,OXT,AVP,C20orf194	FASTKD5,UBOX5,DDRGK1,ITPA	NA	NA	NA	NA	UBOX5	17521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	3159596	3159937	3159912	Y	PTPRA,PTPRA,OXT,AVP,C20orf194	FASTKD5,UBOX5,DDRGK1,ITPA	NA	NA	NA	NA	UBOX5	20754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	3170247	3170648	3170474	Y	NA	FASTKD5,UBOX5,DDRGK1,ITPA,SLC4A11	NA	NA	NA	NA	DDRGK1	12683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	3188788	3188839	3188809	Y	NA	UBOX5,DDRGK1,ITPA,SLC4A11	NA	NA	NA	NA	ITPA	1274	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	3200687	3201082	3200885	Y	NA	DDRGK1,ITPA,SLC4A11	NA	NA	NA	NA	ITPA	13173	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	3348660	3349006	3348744	Y	FASTKD5,UBOX5,GFRA4	C20orf194	NA	NA	NA	NA	C20orf194	37266	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	3377596	3377907	3377772	Y	C20orf194	C20orf194	NA	NA	NA	NA	C20orf194	8365	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	3932717	3933076	3932937	Y	NA	NA	MIR103B2,PANK2	IMR90	Hi-C	24141950	RNF24	61153	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr20	4065883	4066158	4066005	Y	PANK2,RNF24,RNF24	SMOX	RNF24,PANK2,MAVS,MIR103B2,LOC728228	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SMOX	33469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	4810214	4810539	4810355	Y	SLC23A2,CDS2,RASSF2,RASSF2	RASSF2	NA	NA	NA	NA	RASSF2	7923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	4906233	4906312	4906273	Y	RASSF2,RASSF2,SLC23A2,CDS2	NA	NA	NA	NA	NA	SLC23A2	82627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	4954142	4954446	4954407	Y	PRNP,PRNP,RASSF2,RASSF2,SLC23A2,CDS2	SLC23A2	NA	NA	NA	NA	SLC23A2	34493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	5058710	5058848	5058784	Y	PRNP,PRNP,RASSF2,SLC23A2	PCNA,CDS2	NA	NA	NA	NA	PCNA	46424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	5127563	5128387	5127720	Y	GPCPD1,PRNP,PRNP,SLC23A2	PCNA,CDS2	NA	NA	NA	NA	CDS2	22131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	5512444	5512652	5512587	Y	CDS2,TRMT6,CHGB,GPCPD1	NA	NA	NA	NA	NA	GPCPD1	77020	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	5553446	5553705	5553635	Y	NA	GPCPD1	NA	NA	NA	NA	GPCPD1	35967	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	5589880	5590681	5590650	Y	CDS2,TRMT6,C20orf196,GPCPD1	GPCPD1	NA	NA	NA	NA	GPCPD1	208	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	5816621	5816994	5816701	Y	NA	NA	NA	NA	NA	NA	RNU1-55P	51707	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	5826892	5827249	5827089	Y	NA	RNU1-55P	NA	NA	NA	NA	RNU1-55P	41452	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	8173456	8173854	8173482	Y	NA	NA	NA	NA	NA	NA	PLCB1	62632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	8437471	8437869	8437556	Y	PLCB1	NA	NA	NA	NA	NA	PLCB1	326647	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	8509253	8509664	8509321	Y	PLCB1	NA	NA	NA	NA	NA	PLCB1	398429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	9015889	9016122	9016006	Y	NA	PLCB4	PLCB4,PLCB1	IMR90	Hi-C	24141950	PLCB4	31288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	9065873	9065924	9065899	Y	NA	PLCB4	NA	NA	NA	NA	PLCB4	18463	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	10090179	10090302	10090295	Y	PAK7	NA	NA	NA	NA	NA	SNAP25	107176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	10224599	10224683	10224625	Y	NA	SNAP25	NA	NA	NA	NA	SNAP25	27121	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	10466571	10466854	10466711	Y	NA	NA	NA	NA	NA	NA	MKKS	53701	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	10469146	10469624	10469385	Y	NA	NA	NA	NA	NA	NA	MKKS	56276	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	10492212	10492484	10492413	Y	NA	NA	NA	NA	NA	NA	MKKS	79342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	10532947	10533172	10533034	Y	NA	NA	NA	NA	NA	NA	JAG1	91842	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	10655214	10655688	10655561	Y	NA	JAG1	NA	NA	NA	NA	JAG1	30200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	13221839	13221847	13221843	Y	NA	NA	NA	NA	NA	NA	TASP1	395740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	13705752	13706023	13705888	Y	NA	NA	NA	NA	NA	NA	ESF1	57509	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	13734374	13734725	13734663	Y	NA	ESF1	NA	NA	NA	NA	ESF1	28807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	14500869	14501154	14501002	Y	NA	NA	NA	NA	NA	NA	FLRT3	184607	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	16331149	16331548	16331320	Y	NA	NA	NA	NA	NA	NA	KIF16B	220530	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	18276093	18276447	18276109	Y	CSRP2BP	ZNF133	NA	NA	NA	NA	ZNF133	8972	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	19194656	19195454	19194994	Y	NA	SLC24A3	NA	NA	NA	NA	SLC24A3	3366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	19204310	19204662	19204489	Y	SLC24A3	SLC24A3	NA	NA	NA	NA	SLC24A3	13020	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	19293639	19293701	19293669	Y	NA	NA	NA	NA	NA	NA	SLC24A3	102349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	19716018	19716528	19716293	Y	NA	RP1-122P22.2	NA	NA	NA	NA	RP1-122P22.2	19824	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	20009163	20009558	20009361	Y	NA	NAA20,C20orf26,CRNKL1	NA	NA	NA	NA	NAA20	13403	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	20347223	20347613	20347293	Y	NA	INSM1	NA	NA	NA	NA	INSM1	458	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	20432950	20433312	20432989	Y	C20orf26,INSM1	NA	NA	NA	NA	NA	INSM1	86185	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	20652620	20652826	20652771	Y	NA	RALGAPA2	NA	NA	NA	NA	RALGAPA2	38305	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	21147247	21147656	21147458	Y	NA	PLK1S1	NA	NA	NA	NA	PLK1S1	42623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	21486506	21486611	21486559	Y	NA	NA	NA	NA	NA	NA	XRN2	204564	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	23075489	23075921	23075757	Y	THBD,CD93,GZF1	THBD	SSTR4	IMR90	Hi-C	24141950	THBD	47111	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	24007941	24008193	24008043	Y	NA	NA	NA	NA	NA	NA	CST3	390831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	24116508	24116689	24116681	Y	NA	NA	NA	NA	NA	NA	SYNDIG1	331146	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	24947572	24947946	24947787	Y	NA	NA	NA	NA	NA	NA	ACSS1	89670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	25229395	25229593	25229494	Y	NA	PYGB	NA	NA	NA	NA	PYGB	2690	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	25291624	25291957	25291812	Y	NA	NA	NA	NA	NA	NA	PYGB	64919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	25305837	25305970	25305904	Y	NA	NA	NA	NA	NA	NA	ABHD12	63649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	25445422	25445550	25445504	Y	ACSS1,ABHD12	NA	NA	NA	NA	NA	GINS1	59059	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	25671297	25671837	25671511	Y	NA	ZNF337	NA	NA	NA	NA	ZNF337	3640	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	25842208	25842444	25842317	Y	ZNF337	NA	NA	NA	NA	NA	ZNF337	166731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	25846181	25846562	25846485	Y	ZNF337	NA	NA	NA	NA	NA	ZNF337	170704	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr20	26116339	26116766	26116505	Y	NA	NA	NA	NA	NA	NA	MIR663A	113396	CAGE	JHUCS-1	hg19	FANTOM5	3.49950764960684
chr20	29649919	29650288	29650100	Y	NA	FRG1B	NA	NA	NA	NA	FRG1B	40062	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	29813884	29814207	29814051	Y	DEFB116	NA	NA	NA	NA	NA	RP5-854E16.2	58431	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30158598	30158945	30158767	Y	NA	ID1	NA	NA	NA	NA	ID1	32141	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30191850	30192346	30192159	Y	ID1	ID1,COX4I2	NA	NA	NA	NA	ID1	764	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	30194967	30195344	30195216	Y	NA	ID1,COX4I2	NA	NA	NA	NA	ID1	3881	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30196293	30196740	30196417	Y	ID1	ID1,COX4I2	NA	NA	NA	NA	ID1	5207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30200712	30201016	30200864	Y	TTLL9,DUSP15,DEFB116,DEFB121	ID1,COX4I2	NA	NA	NA	NA	ID1	9626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30298803	30298834	30298814	Y	NA	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	10958	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30303594	30303801	30303667	Y	TTLL9,DUSP15	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	5991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30305141	30305549	30305422	Y	PLAGL2,HCK	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	4243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30658621	30658804	30658731	Y	PLAGL2,C20orf112,HCK	TM9SF4	NA	NA	NA	NA	TM9SF4	36505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	30705137	30705472	30705281	Y	HCK,PLAGL2	TM9SF4	NA	NA	NA	NA	TM9SF4	9828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	31045263	31045487	31045417	Y	KIF3B	NA	NA	NA	NA	NA	ASXL1	101108	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	31127706	31127839	31127777	Y	ASXL1	C20orf112	NA	NA	NA	NA	C20orf112	43037	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	32093960	32094027	32093984	Y	NA	CBFA2T2	NA	NA	NA	NA	CBFA2T2	18079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	32142835	32143155	32142948	Y	C20orf186,CDK5RAP1,CHMP4B	NA	NA	NA	NA	NA	CBFA2T2	66954	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	32425244	32425406	32425325	Y	CHMP4B	CHMP4B	NA	NA	NA	NA	CHMP4B	28134	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	32753335	32753546	32753441	Y	NA	RPS2P1	ITCH,AHCY,PXMP4,ZNF341,DYNLRB1	IMR90	Hi-C	24141950	RPS2P1	45059	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	32803456	32803920	32803688	Y	NA	NA	ITCH,DYNLRB1,ASIP	IMR90	Hi-C	24141950	AHCY	93688	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	32826582	32826856	32826719	Y	TP53INP2	NA	EIF2S2,AHCY,ASIP,ITCH,DYNLRB1,PIGU	IMR90	Hi-C	24141950	AHCY	70752	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	32989671	32989803	32989744	Y	NA	ITCH	NA	NA	NA	NA	ITCH	40630	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	33064297	33064587	33064427	Y	ACSS2	DYNLRB1	NA	NA	NA	NA	DYNLRB1	37627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	33152713	33153029	33152857	Y	TP53INP2	MAP1LC3A	NA	NA	NA	NA	MAP1LC3A	20055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	33900177	33900484	33900409	Y	GSS,EIF6,EIF6	EDEM2,EIF6	NA	NA	NA	NA	EIF6	29389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	34093619	34093844	34093641	Y	NA	ERGIC3	NA	NA	NA	NA	ERGIC3	33926	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	34217204	34217560	34217502	Y	NA	CPNE1,RBM12	NA	NA	NA	NA	CPNE1,RBM12	33318	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	34471781	34472424	34472101	Y	NA	RNU4-40P	NA	NA	NA	NA	RNU4-40P	1157	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	34652590	34653055	34652672	Y	NA	EPB41L1	LOC647979,PHF20,SCAND1,C20orf152,EPB41L1	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	EPB41L1	24371	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	35019888	35020140	35020089	Y	NA	NA	NA	NA	NA	NA	DLGAP4	127630	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	35234952	35235695	35235080	Y	NA	TGIF2,C20orf24	NA	NA	NA	NA	C20orf24	2815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	35305679	35305903	35305811	Y	NA	NA	NA	NA	NA	NA	NDRG3	66578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	35464098	35464342	35464182	Y	RBL1,DSN1,DSN1	NA	NA	NA	NA	NA	DSN1	63877	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr20	35489284	35489554	35489419	Y	NA	NA	NA	NA	NA	NA	SAMHD1	88692	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	35490387	35490628	35490526	Y	MANBAL,KIAA0889	NA	KIAA0889	MCF7	ChIA-PET	22265404	SAMHD1	87618	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr20	35821029	35821195	35821110	Y	NA	RPN2	GHRH	IMR90	Hi-C	24141950	RPN2	16216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	35851515	35851770	35851561	Y	SAMHD1,SRC,MANBAL,CTNNBL1	RPN2	NA	NA	NA	NA	RPN2	46702	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	36034782	36035452	36035129	Y	C20orf132,VSTM2L,NNAT	RPL7AP14	NA	NA	NA	NA	RPL7AP14	36484	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr20	36040005	36040428	36040132	Y	VSTM2L,NNAT	RPL7AP14	NA	NA	NA	NA	RPL7AP14	31508	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	36040566	36040861	36040811	Y	NA	RPL7AP14	NA	NA	NA	NA	RPL7AP14	31075	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	36056702	36057072	36056829	Y	NA	RPL7AP14	NA	NA	NA	NA	RPL7AP14	14864	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	36132626	36132893	36132840	Y	NA	BLCAP	NA	NA	NA	NA	BLCAP	21440	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	36135409	36135682	36135567	Y	NA	BLCAP	NA	NA	NA	NA	BLCAP	18651	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr20	36298725	36299073	36298903	Y	C20orf132	CTNNBL1	VSTM2L,LOC100287792,RPN2,CTNNBL1,TTI1,LBP	IMR90	Hi-C	24141950	CTNNBL1	21335	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	36389387	36389716	36389551	Y	NA	NA	VSTM2L	IMR90	Hi-C	24141950	CTNNBL1	68979	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	37302978	37303466	37303191	Y	ACTR5,SLC32A1	NA	ARHGAP40,ACTR5,SLC32A1,PPP1R16B	IMR90	Hi-C	24141950	ACTR5	71619	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	39939044	39939335	39939233	Y	NA	ZHX3,LPIN3	ZHX3,PLCG1	IMR90	Hi-C	24141950	ZHX3	4977	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	41903054	41903260	41903157	Y	NA	NA	NA	NA	NA	NA	PTPRT	86444	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	42286061	42286420	42286177	Y	SRSF6,L3MBTL1,MYBL2	MYBL2	MYBL2	IMR90	Hi-C	24141950	MYBL2	7334	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr20	42833040	42833424	42833233	Y	C20orf111	JPH2,OSER1-AS1,GDAP1L1	NA	NA	NA	NA	OSER1-AS1	4176	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	43023129	43023488	43023363	Y	HNF4A	NA	NA	NA	NA	NA	RPL37AP1	69994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	43569969	43570092	43570031	Y	RBPJL,TP53TG5,STK4	PABPC1L,TOMM34,STK4	NA	NA	NA	NA	TOMM34	17035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	43582253	43582415	43582335	Y	NA	PABPC1L,TOMM34,STK4	NA	NA	NA	NA	TOMM34	4712	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	44001576	44001658	44001579	Y	WFDC11,KCNS1,TP53TG5,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	SDC4,SYS1,SYS1-DBNDD2,PIGT	NA	NA	NA	NA	SYS1-DBNDD2	11736	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	44622132	44622355	44622242	Y	CD40,ZNF335	ZNF335,SLC12A5	ZNF335,MMP9,SLC12A5	MCF7	ChIA-PET	22265404	ZNF335	23299	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	44855330	44855616	44855473	Y	ZNF334,SLC12A5,CDH22	NA	NA	NA	NA	NA	CDH22	79521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	44935542	44935954	44935889	Y	ZNF334,SLC12A5,CDH22	CDH22	CDH22	IMR90	Hi-C	24141950	CDH22	405	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	45006307	45006609	45006393	Y	PCIF1,ZNF335	SLC35C2	NA	NA	NA	NA	SLC35C2	15264	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	45251611	45251999	45251807	Y	NA	NA	NA	NA	NA	NA	TP53RK	64419	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	45870109	45870518	45870490	Y	ZMYND8,NCOA3	NA	NA	NA	NA	NA	ZMYND8	113049	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	45987479	45988292	45987961	Y	NA	ZMYND8	ZMYND8,LOC100131496,NCOA3	IMR90	Hi-C	24141950	ZMYND8	3912	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	46299616	46300006	46299878	Y	NCOA3,SULF2,SULF2	NA	NA	NA	NA	NA	SULF2	113354	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr20	46316176	46316372	46316269	Y	NA	NA	NA	NA	NA	NA	SULF2	96988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	46356086	46356757	46356412	Y	SULF2,SULF2	NA	NA	NA	NA	NA	SULF2	56603	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	46653872	46653986	46653882	Y	NA	NA	SULF2	MCF7	ChIA-PET	22265404	SULF2	240512	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr20	47547466	47547777	47547635	Y	ZNFX1,ARFGEF2	ARFGEF2	NA	NA	NA	NA	ARFGEF2	11039	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	47803381	47804147	47803544	Y	PREX1,STAU1	STAU1,DDX27	NA	NA	NA	NA	STAU1	477	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	48293445	48293839	48293746	Y	NA	B4GALT5	NA	NA	NA	NA	B4GALT5	34576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	48315836	48316073	48315912	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5,SNRPFP1	NA	NA	NA	NA	B4GALT5	12342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	48317822	48318037	48318021	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5,SNRPFP1	NA	NA	NA	NA	B4GALT5	10378	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	48344165	48344359	48344242	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5,SNRPFP1	ZNFX1-AS1,B4GALT5,SLC9A8	IMR90	Hi-C	24141950	SNRPFP1	20	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	48391675	48392320	48391995	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,CEBPB,SLC9A8	SNRPFP1,SLC9A8	B4GALT5,SLC9A8,KCNB1,SPATA2	IMR90	Hi-C	24141950	SLC9A8	34930	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	48809447	48810205	48810164	Y	B4GALT5,SPATA2,SPATA2,CEBPB	TMEM189-UBE2V1,TMEM189,RP11-112L6.4,CEBPB	NA	NA	NA	NA	CEBPB	4071	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	49170357	49170595	49170426	Y	NA	PTPN1	NA	NA	NA	NA	PTPN1	45466	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	49407275	49407470	49407371	Y	MOCS3	BCAS4	ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3	MCF7,K562	ChIA-PET	22265404	BCAS4	1961	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr20	49524499	49524706	49524614	Y	ADNP	RP5-914P20.5,ADNP,DPM1,MOCS3	NA	NA	NA	NA	RP5-914P20.5	20815	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	50134591	50134950	50134771	Y	NA	NA	NA	NA	NA	NA	RP5-827A12.2	214122	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	50141744	50142683	50142582	Y	NA	NA	NA	NA	NA	NA	RP5-827A12.2	206389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	50180369	50180507	50180463	Y	NFATC2	NA	NA	NA	NA	NA	RP5-827A12.2	168565	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	50272756	50273155	50272761	Y	ATP9A	NA	NA	NA	NA	NA	RP5-827A12.2	75917	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	50383575	50384083	50383723	Y	ATP9A	RP5-827A12.2,ATP9A	NA	NA	NA	NA	ATP9A	402	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr20	52482655	52483054	52482957	Y	NA	NA	NA	NA	NA	NA	ZNF217	258209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	52831217	52831490	52831439	Y	NA	PFDN4	NA	NA	NA	NA	PFDN4	8831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	54984681	54984944	54984781	Y	CASS4,CASS4,C20orf43	AURKA,CSTF1	NA	NA	NA	NA	CSTF1	19254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	56293544	56293843	56293665	Y	NA	PMEPA1	NA	NA	NA	NA	PMEPA1	8952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	56983736	56983744	56983737	Y	NA	VAPB	NA	NA	NA	NA	VAPB	21558	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	57228113	57228577	57228221	Y	NA	STX16,STX16-NPEPL1,NPEPL1	NA	NA	NA	NA	STX16-NPEPL1	3623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	57270107	57270808	57270490	Y	NA	STX16,STX16-NPEPL1,NPEPL1	NA	NA	NA	NA	NPEPL1	7920	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	57750104	57750489	57750217	Y	ZNF831	NA	ZNF831	IMR90	Hi-C	24141950	SLMO2	134140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	58437773	58438005	58437846	Y	NA	NA	NA	NA	NA	NA	PPP1R3D	75347	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	60719468	60719634	60719593	Y	SS18L1,GTPBP5	LSM14B,PSMA7,SS18L1	NA	NA	NA	NA	SS18L1	2646	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr20	60811895	60811989	60811929	Y	GATA5,CABLES2	HRH3,OSBPL2	NA	NA	NA	NA	OSBPL2	315	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	60935306	60935741	60935523	Y	NA	LAMA5,RPS21,CABLES2	ADRM1	K562	ChIA-PET	22265404	LAMA5	4627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	60956743	60957219	60956871	Y	NA	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	RPS21	2953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	60972798	60973035	60972874	Y	NA	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	CABLES2	7306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	61282674	61283033	61282738	Y	OSBPL2,DPH3P1,OGFR,DIDO1	SLCO4A1	NA	NA	NA	NA	SLCO4A1	10877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	61555881	61556606	61556058	Y	DIDO1	DIDO1	NA	NA	NA	NA	DIDO1	10698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	61806793	61806933	61806887	Y	STMN3,KCNQ2,EEF1A2,COL20A1,CHRNA4	YTHDF1	NA	NA	NA	NA	YTHDF1	38653	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr20	62085174	62085706	62085468	Y	BHLHE23,NKAIN4,CHRNA4,SRMS,UCKL1,STMN3,RTEL1,EEF1A2,KCNQ2	RP11-358D14.2,KCNQ2,EEF1A2	NA	NA	NA	NA	RP11-358D14.2	7770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	62088084	62088568	62088367	Y	NA	RP11-358D14.2,KCNQ2,EEF1A2	NA	NA	NA	NA	RP11-358D14.2	10680	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	62139467	62139677	62139572	Y	NA	KCNQ2,EEF1A2,PPDPF	NA	NA	NA	NA	PPDPF	10400	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	62478016	62478296	62478069	Y	NA	ZBTB46,TPD52L2,DNAJC5	NA	NA	NA	NA	TPD52L2	16300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	62494990	62495823	62495679	Y	NA	ZBTB46,TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	TPD52L2	394	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	62683158	62683348	62683288	Y	NA	ZNF512B,SOX18,TCEA2,RGS19	NA	NA	NA	NA	TCEA2	3969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr20	62793391	62793466	62793434	Y	NA	MYT1	NA	NA	NA	NA	MYT1	12247	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr20	62887659	62888425	62887862	Y	SAMD10,PCMTD2	PCMTD2	NA	NA	NA	NA	PCMTD2	2565	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr20	62908248	62908643	62908435	Y	NA	PCMTD2	NA	NA	NA	NA	PCMTD2	23154	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	15450488	15450803	15450511	Y	NA	NA	NA	NA	NA	NA	AP001347.6	52746	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	17153700	17154031	17153865	Y	NA	NA	NA	NA	NA	NA	USP25	53356	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	17264124	17264427	17264344	Y	NA	NA	NA	NA	NA	NA	USP25	163780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	17660204	17660286	17660245	Y	NA	SNORD74	NA	NA	NA	NA	SNORD74	5115	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	17958916	17959192	17958984	Y	NA	NA	NA	NA	NA	NA	SNORD74	303827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	17959400	17959753	17959559	Y	NA	NA	NA	NA	NA	NA	SNORD74	304311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	18443678	18443955	18443817	Y	NA	NA	NA	NA	NA	NA	CXADR	438745	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	24819380	24819635	24819508	Y	NA	TUBAP	NA	NA	NA	NA	TUBAP	39932	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	26745282	26745696	26745293	Y	NA	NA	NA	NA	NA	NA	MRPL39	232133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	26859575	26859920	26859726	Y	NA	NA	NA	NA	NA	NA	MRPL39	117909	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	26952057	26952278	26952105	Y	JAM2	MRPL39	NA	NA	NA	NA	MRPL39	25551	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr21	26956680	26957339	26957242	Y	NA	MRPL39	NA	NA	NA	NA	MRPL39	20490	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	26962945	26963646	26963455	Y	NA	MRPL39,JAM2	NA	NA	NA	NA	MRPL39	14183	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	27082933	27083032	27082983	Y	NA	GABPA,ATP5J	NA	NA	NA	NA	GABPA	21849	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	27242944	27243154	27243052	Y	NA	NA	NA	NA	NA	NA	ATP5J	136960	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	27340051	27340173	27340112	Y	NA	NA	NA	NA	NA	NA	APP	201273	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	27353741	27354048	27353953	Y	APP	NA	NA	NA	NA	NA	APP	187398	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	27370700	27370785	27370725	Y	NA	NA	NA	NA	NA	NA	APP	170661	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr21	28288547	28289033	28288781	Y	ADAMTS5,ADAMTS1	ADAMTS5	NA	NA	NA	NA	ADAMTS5	47799	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	28300536	28300937	28300780	Y	ADAMTS5,ADAMTS1	ADAMTS5	NA	NA	NA	NA	ADAMTS5	35895	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	28336800	28337144	28336952	Y	ADAMTS1,ADAMTS5	NA	NA	NA	NA	NA	ADAMTS5	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	28943005	28943182	28943085	Y	NA	NA	ADAMTS1,ADAMTS5,MIR4759	IMR90	Hi-C	24141950	ADAMTS5	606173	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	30374865	30375265	30375125	Y	C21orf7,N6AMT1,LTN1,USP16	LTN1,RPL23P2,RWDD2B,USP16	LTN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL23P2	6511	CAGE	JHUCS-1	hg19	FANTOM5	12.9981712699683
chr21	30669074	30669451	30669267	Y	BACH1,BACH1	NA	NA	NA	NA	NA	BACH1	104682	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	30754427	30754628	30754578	Y	NA	NA	NA	NA	NA	NA	BACH1	190035	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	30758449	30758782	30758692	Y	NA	NA	NA	NA	NA	NA	BACH1	194057	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	32781181	32781372	32781277	Y	NA	NA	NA	NA	NA	NA	AP000251.3	148186	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	32862869	32863036	32862944	Y	NA	NA	NA	NA	NA	NA	AP000251.3	66522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	33105563	33105881	33105775	Y	SCAF4	SCAF4	NA	NA	NA	NA	SCAF4	3175	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	33853478	33853730	33853567	Y	NA	NA	NA	NA	NA	NA	C21orf119	90039	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	34659541	34659728	34659635	Y	NA	IL10RB,IFNAR1	NA	NA	NA	NA	IL10RB	22878	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	34801962	34801998	34801980	Y	NA	IFNGR2,TMEM50B	NA	NA	NA	NA	IFNGR2	28760	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	35312592	35312729	35312724	Y	GART,GART,SON	ATP5O	NA	NA	NA	NA	ATP5O	26308	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	35508184	35508396	35508291	Y	NA	NA	NA	NA	NA	NA	SLC5A3	64314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	35863434	35863747	35863591	Y	NA	NA	NA	NA	NA	NA	RCAN1	121694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	36281882	36282257	36282001	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	CLIC6	242194	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	36798542	36798764	36798653	Y	NA	NA	CLIC6,RUNX1,LOC100506385	IMR90	Hi-C	24141950	RUNX1	576201	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	36937518	36937720	36937706	Y	NA	NA	RUNX1,LOC100506385	IMR90	Hi-C	24141950	RUNX1	437245	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	37694250	37694633	37694410	Y	NA	MORC3	NA	NA	NA	NA	MORC3	3763	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	38072912	38073314	38073050	Y	SIM2	SIM2	HLCS	IMR90	Hi-C	24141950	SIM2	3479	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr21	38151764	38151954	38151859	Y	NA	NA	NA	NA	NA	NA	SIM2	82331	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	38349168	38349478	38349323	Y	TTC3,DYRK1A,HLCS	AP000704.5,HLCS	NA	NA	NA	NA	HLCS	11058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	38801876	38802213	38802018	Y	DYRK1A,DYRK1A,DYRK1A,DYRK1A	NA	NA	NA	NA	NA	DYRK1A	65784	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	38986410	38986680	38986546	Y	KCNJ6	NA	NA	NA	NA	NA	DYRK1A	250318	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	38988988	38989241	38989189	Y	NA	NA	NA	NA	NA	NA	DYRK1A	252896	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	39004614	39004980	39004830	Y	NA	NA	NA	NA	NA	NA	DYRK1A	268522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	39238494	39238669	39238574	Y	DYRK1A,DYRK1A,DYRK1A,DYRK1A,KCNJ15	KCNJ6	NA	NA	NA	NA	KCNJ6	48080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	39658761	39658879	39658842	Y	NA	NA	NA	NA	NA	NA	DSCR8	167216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	40476284	40476629	40476514	Y	ETS2	NA	ETS2,LINC00114,ERG	IMR90	Hi-C	24141950	PSMG1	77148	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	40673787	40673929	40673891	Y	NA	BRWD1,HMGN1	NA	NA	NA	NA	BRWD1	17556	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	40753076	40753485	40753292	Y	WRB	HMGN1,WRB	NA	NA	NA	NA	WRB	2906	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	41266062	41266444	41266253	Y	SH3BGR,PCP4	PCP4	NA	NA	NA	NA	PCP4	28819	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	43613222	43613652	43613410	Y	C2CD2,ZNF295,UMODL1,ABCG1,ABCG1,ABCG1,ABCG1	ABCG1	ABCG1	K562	ChIA-PET	22265404	ABCG1	4147	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	43654635	43655282	43654967	Y	NA	ABCG1	TFF3	IMR90	Hi-C	24141950	ABCG1	36836	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	44278308	44278654	44278481	Y	NA	WDR4,NDUFV3	NA	NA	NA	NA	WDR4	19024	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	44597156	44597534	44597315	Y	SIK1	NA	NA	NA	NA	NA	U2AF1	71459	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr21	44876908	44877060	44877025	Y	NA	SIK1	NA	NA	NA	NA	SIK1	31900	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr21	44937921	44938237	44938215	Y	NA	NA	NA	NA	NA	NA	SIK1	92913	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	45080522	45080871	45080626	Y	TRAPPC10,PWP2,SIK1,RRP1B	HSF2BP,RRP1B	NA	NA	NA	NA	RRP1B	3093	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	45337582	45337952	45337767	Y	NA	NA	NA	NA	NA	NA	AGPAT3	54515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	45394155	45394780	45394371	Y	AGPAT3,TRPM2,C21orf33	TRAPPC10	NA	NA	NA	NA	TRAPPC10	35420	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	46097395	46097576	46097539	Y	KRTAP10-7,KRTAP10-12	NA	NA	NA	NA	NA	UBE2G2	122358	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr21	46389792	46390113	46389960	Y	POFUT2,ITGB2	FAM207A	NA	NA	NA	NA	FAM207A	31867	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	46495480	46495526	46495490	Y	KRTAP10-12,ADARB1	ADARB1	NA	NA	NA	NA	ADARB1	3712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	46719490	46719844	46719718	Y	NA	POFUT2	NA	NA	NA	NA	POFUT2	13677	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	46859041	46859207	46859093	Y	NA	COL18A1	NA	NA	NA	NA	COL18A1	35989	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	46937763	46937981	46937791	Y	POFUT2,SLC19A1,SLC19A1	SLC19A1	NA	NA	NA	NA	SLC19A1	24344	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47010467	47010705	47010586	Y	NA	SLC19A1,AL133493.2	PCBP3,LOC100129027,SLC19A1,COL18A1,POFUT2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AL133493.2	863	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr21	47167832	47168236	47167895	Y	NA	NA	PCBP3,LOC100129027	IMR90	Hi-C	24141950	PCBP3	106224	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47191109	47191365	47191237	Y	NA	NA	LOC100129027,SLC19A1	IMR90	Hi-C	24141950	PCBP3	129501	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47266684	47266899	47266840	Y	NA	NA	NA	NA	NA	NA	COL6A1	132752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47291758	47292008	47291998	Y	NA	NA	NA	NA	NA	NA	COL6A1	107643	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47370674	47370877	47370809	Y	NA	COL6A1	COL6A1	IMR90	Hi-C	24141950	COL6A1	28774	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47394030	47394545	47394409	Y	LSS,COL6A2,C21orf56,COL6A1	COL6A1	COL6A1	K562	ChIA-PET	22265404	COL6A1	5106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47637534	47637799	47637667	Y	NA	LSS,MCM3AP-AS1	NA	NA	NA	NA	LSS	8939	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47651317	47651563	47651562	Y	NA	LSS,MCM3AP-AS1	NA	NA	NA	NA	MCM3AP-AS1	4186	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr21	47968526	47968894	47968542	Y	NA	NA	NA	NA	NA	NA	PRMT2	84185	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr21	48003626	48004009	48003657	Y	S100B,PRMT2	PRMT2	NA	NA	NA	NA	PRMT2	49070	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	17091097	17091180	17091141	Y	IL17RA	NA	NA	NA	NA	NA	IL17RA	472664	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	17652206	17652871	17652785	Y	NA	CECR5-AS1,CECR5,AC005300.5	NA	NA	NA	NA	CECR5	8029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	17850637	17851018	17850672	Y	NA	CECR2	NA	NA	NA	NA	CECR2	11800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	18506386	18506784	18506419	Y	MICAL3	MICAL3	NA	NA	NA	NA	MICAL3	1061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	18629925	18630231	18630217	Y	NA	TUBA8	NA	NA	NA	NA	TUBA8	38828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	19159081	19159242	19159165	Y	NA	DGCR14,SLC25A1	NA	NA	NA	NA	SLC25A1	5101	CAGE	JHUCS-1	hg19	FANTOM5	4.16608053524624
chr22	19331396	19331535	19331466	Y	NA	NA	NA	NA	NA	NA	CLTCL1	54157	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	19337870	19338225	19337898	Y	NA	NA	NA	NA	NA	NA	CLTCL1	60631	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	19410653	19410889	19410838	Y	HIRA	MRPL40,HIRA,AC000068.5,C22orf39	NA	NA	NA	NA	MRPL40	6536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	19930770	19931097	19930953	Y	ZDHHC8,COMT	COMT,TXNRD2	NA	NA	NA	NA	TXNRD2	3429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	19941739	19941814	19941777	Y	NA	COMT,TXNRD2	NA	NA	NA	NA	TXNRD2	14398	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	19983308	19983423	19983389	Y	NA	ARVCF	NA	NA	NA	NA	ARVCF	18908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	20142939	20143182	20143142	Y	NA	RANBP1,TRMT2A,ZDHHC8	NA	NA	NA	NA	ZDHHC8	27960	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	20258205	20258516	20258358	Y	NA	RTN4R,XXbac-B444P24.10,DGCR6L	NA	NA	NA	NA	RTN4R	10253	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	20287043	20287283	20287165	Y	NA	RTN4R,XXbac-B444P24.10,DGCR6L	NA	NA	NA	NA	XXbac-B444P24.10	1760	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr22	20850844	20851071	20850923	Y	PI4KA,AIFM3,AIFM3	KLHL22,MED15	NA	NA	NA	NA	MED15	2644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	22010846	22011267	22010978	Y	YPEL1	YDJC,SDF2L1,PPIL2	NA	NA	NA	NA	PPIL2	6287	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	22011632	22012115	22011859	Y	NA	YDJC,SDF2L1,PPIL2	NA	NA	NA	NA	PPIL2	7073	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr22	22067448	22067680	22067564	Y	YPEL1	YPEL1	NA	NA	NA	NA	YPEL1	20443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	22186398	22186549	22186531	Y	NA	MAPK1	NA	NA	NA	NA	MAPK1	33421	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	22205229	22205454	22205405	Y	NA	MAPK1	NA	NA	NA	NA	MAPK1	14516	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	22396483	22396779	22396659	Y	NA	NA	NA	NA	NA	NA	TOP3B	61270	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	23751089	23751099	23751094	Y	NA	ZDHHC8P1	GNAZ,RTDR1,BCR,ZDHHC8P1	IMR90	Hi-C	24141950	ZDHHC8P1	8176	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	23863249	23863551	23863355	Y	NA	NA	ZDHHC8P1	IMR90	Hi-C	24141950	ZDHHC8P1	120336	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	23863943	23864332	23864232	Y	GNAZ,RTDR1,BCR	NA	ZDHHC8P1	IMR90	Hi-C	24141950	ZDHHC8P1	121030	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr22	24153288	24153648	24153392	Y	RGL4,LOC391322	MMP11,CHCHD10,SMARCB1,DERL3,SLC2A11	DERL3	IMR90	Hi-C	24141950	DERL3	25667	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr22	24255997	24256450	24256302	Y	C22orf43,CABIN1,CABIN1	MIF	NA	NA	NA	NA	MIF	21806	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr22	24767148	24767407	24767278	Y	GGT1	NA	NA	NA	NA	NA	SPECC1L-ADORA2A	102282	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	24795656	24796304	24795694	Y	NA	NA	NA	NA	NA	NA	SPECC1L-ADORA2A	130790	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	24799556	24799967	24799568	Y	NA	NA	NA	NA	NA	NA	SPECC1L-ADORA2A	134690	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	24822420	24822603	24822512	Y	NA	NA	NA	NA	NA	NA	SNRPD3	126868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	24841280	24841490	24841385	Y	ADORA2A	NA	NA	NA	NA	NA	SNRPD3	107981	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	24878539	24879065	24878732	Y	GGT1	NA	NA	NA	NA	NA	SNRPD3	70406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	24948988	24949121	24949055	Y	ADORA2A	SNRPD3,FAM211B	NA	NA	NA	NA	SNRPD3	350	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	25354945	25355076	25355012	Y	NA	NA	KIAA1671,SGSM1,TMEM211	IMR90	Hi-C	24141950	SNORD56	59764	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	25381840	25382180	25381995	Y	NA	NA	KIAA1671	IMR90	Hi-C	24141950	SNORD56	86659	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	27107290	27107513	27107356	Y	NA	CTA-211A9.5	MIAT	IMR90	Hi-C	24141950	CTA-211A9.5	40560	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	27872779	27873029	27872871	Y	NA	NA	PITPNB,TTC28,TTC28-AS1,MN1,MIAT	IMR90	Hi-C	24141950	RP5-1172A22.1	254091	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	28304832	28305219	28305193	Y	NA	TTC28-AS1,PITPNB	NA	NA	NA	NA	TTC28-AS1	8145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	28549378	28549438	28549411	Y	NA	NA	NA	NA	NA	NA	PITPNB	235256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	28837872	28838192	28838073	Y	TTC28	NA	NA	NA	NA	NA	TTC28	235661	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	28956104	28956479	28956470	Y	NA	NA	NA	NA	NA	NA	TTC28	117374	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	29209751	29210048	29209892	Y	CCDC117,XBP1	CCDC117,XBP1,CTA-292E10.6	CHEK2,HSCB,C22orf31,ZNRF3,KREMEN1,TTC28,TTC28-AS1,EMID1,CCDC117,XBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTA-292E10.6	15080	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	29365910	29365950	29365937	Y	NA	NA	NA	NA	NA	NA	ZNRF3	88330	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	29471077	29471334	29471238	Y	KREMEN1	KREMEN1	NA	NA	NA	NA	KREMEN1	4011	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	30102464	30102720	30102592	Y	NA	CABP7	NA	NA	NA	NA	CABP7	11353	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	31030399	31030736	31030505	Y	SMTN,OSM,TBC1D10A,CCDC157,SF3A1,DUSP18,SLC35E4	TCN2,PES1,SLC35E4,DUSP18	NA	NA	NA	NA	SLC35E4	760	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	31626331	31627201	31626769	Y	SMTN,RNF185,LIMK2	LIMK2	NA	NA	NA	NA	LIMK2	20106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	31629034	31629491	31629163	Y	SMTN,RNF185,LIMK2	LIMK2	NA	NA	NA	NA	LIMK2	22809	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	31639418	31639541	31639442	Y	NA	LIMK2,PIK3IP1	NA	NA	NA	NA	LIMK2	33193	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	32042427	32042918	32042716	Y	RNF185,LIMK2	PISD	NA	NA	NA	NA	PISD	13500	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	32048774	32049039	32049031	Y	NA	PISD	SFI1,EIF4ENIF1,DEPDC5,YWHAH,C22orf24,C22orf28,LOC339666,RFPL3-AS1,PRR14L	GM12878,K562,IMR90	5C,Hi-C	22955621,24141950	PISD	7379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	32465502	32465679	32465590	Y	SLC5A4,SLC5A1	SC22CB-1E7.1	NA	NA	NA	NA	SC22CB-1E7.1	32025	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	32615051	32615519	32615197	Y	DEPDC5	RP1-90G24.10	RFPL2	IMR90	Hi-C	24141950	RP1-90G24.10	15949	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr22	34263249	34263475	34263362	Y	NA	NA	NA	NA	NA	NA	Z98256.1	1008829	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	34317541	34317731	34317667	Y	LARGE	NA	NA	NA	NA	NA	Z98256.1	1063121	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	35443354	35443580	35443467	Y	TOM1,TOM1,HMOX1	NA	ISX	IMR90	Hi-C	24141950	CTA-714B7.5	181469	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	35529944	35530291	35530139	Y	ISX	NA	LARGE	IMR90	Hi-C	24141950	CTA-714B7.5	94758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	36149671	36149849	36149827	Y	NA	NA	APOL5	IMR90	Hi-C	24141950	APOL6	107229	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	36299462	36299943	36299718	Y	NA	NA	NA	NA	NA	NA	RBFOX2	122530	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	36385915	36386246	36386112	Y	NA	RBFOX2	NA	NA	NA	NA	RBFOX2	36227	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	36746983	36747265	36747123	Y	NA	MYH9	NA	NA	NA	NA	MYH9	34798	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	36866824	36867261	36867092	Y	NA	RP5-1119A7.14,TXN2,FOXRED2	NA	NA	NA	NA	TXN2	8816	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	37045124	37045370	37045286	Y	APOL3,IFT27,CACNG2	NA	NA	NA	NA	NA	CACNG2	52233	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	37582993	37583226	37583109	Y	NA	C1QTNF6	NA	NA	NA	NA	C1QTNF6	10199	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	37799328	37799559	37799444	Y	NA	NA	NA	NA	NA	NA	CARD10	113990	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	38142899	38142964	38142949	Y	CDC42EP1,LGALS1,TRIOBP,POLR2F,GCAT,ANKRD54	NA	NA	NA	NA	NA	TRIOBP	51888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	38416084	38416187	38416126	Y	KCNJ4,PDXP,SOX10,PLA2G6,PLA2G6,SLC16A8,PICK1	PICK1	SOX10,POLR2F,PICK1,MAFF	IMR90	Hi-C	24141950	PICK1	34131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	38599886	38600218	38600032	Y	NA	PLA2G6	NA	NA	NA	NA	PLA2G6	189	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	39541576	39542088	39541730	Y	JOSD1,GTPBP1,SUN2,SUN2,APOBEC3G,CBX7	CBX7	NA	NA	NA	NA	CBX7	4591	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	39854172	39854554	39854368	Y	CBX7,SYNGR1,MGAT3,MGAT3	MGAT3	NA	NA	NA	NA	MGAT3	2823	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	39954931	39955300	39955094	Y	NA	ATF4,RPS19BP1	CACNA1I,ENTHD1,TNRC6B,MGAT3,GRAP2,FAM83F,LOC100130899,ADSL	IMR90	Hi-C	24141950	RPS19BP1	28071	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	40575185	40575584	40575306	Y	TNRC6B,TNRC6B	NA	NA	NA	NA	NA	RPL7P52	74115	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	40680802	40681181	40680841	Y	NA	NA	NA	NA	NA	NA	ADSL	59326	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	40982487	40982801	40982645	Y	NA	MKL1	NA	NA	NA	NA	MKL1	47905	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	41003149	41003516	41003333	Y	NA	MKL1	NA	NA	NA	NA	MKL1	27190	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	41047729	41047883	41047796	Y	NA	MKL1,GAPDHP37,MCHR1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17023	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr22	41048065	41048352	41048232	Y	EP300,MKL1	MKL1,GAPDHP37,MCHR1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17359	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr22	41417973	41418366	41418067	Y	MKL1,EP300	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	39690	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr22	41418482	41418837	41418726	Y	MKL1,EP300	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	39219	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr22	41809427	41810696	41809981	Y	CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF	TEF,TOB2	NA	NA	NA	NA	TOB2	30331	CAGE	JHUCS-1	hg19	FANTOM5	2.49964832114774
chr22	41839332	41839605	41839469	Y	TOB2	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	1422	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	41840300	41840792	41840564	Y	NA	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	235	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr22	41844337	41844774	41844650	Y	SHISA8,TEF,TEF,TOB2	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	3310	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	42062739	42062953	42062873	Y	NA	XRCC6,C22orf46,NHP2L1	NA	NA	NA	NA	C22orf46	19990	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	42315897	42316153	42316014	Y	CENPM,SHISA8,TNFRSF13C	SHISA8,TNFRSF13C,CENPM	NA	NA	NA	NA	TNFRSF13C	4669	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	42339043	42339310	42339264	Y	NA	SHISA8,TNFRSF13C,CENPM,SEPT3	NA	NA	NA	NA	CENPM	1858	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	42485778	42486189	42485966	Y	CCDC134,CENPM,NFAM1,C22orf32	NAGA,NDUFA6	NA	NA	NA	NA	NDUFA6	819	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	42527695	42528060	42527840	Y	CYP2D6	NDUFA6	NA	NA	NA	NA	NDUFA6	42736	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	42763845	42763943	42763880	Y	NA	Z83851.1	NA	NA	NA	NA	Z83851.1	603	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	42781822	42781948	42781862	Y	SERHL2	Z83851.1	NA	NA	NA	NA	Z83851.1	18580	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	43178512	43178746	43178699	Y	NA	NA	NA	NA	NA	NA	A4GALT	63208	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	43233624	43233705	43233665	Y	NA	ARFGAP3	NA	NA	NA	NA	ARFGAP3	18407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	43400219	43400728	43400510	Y	NA	PACSIN2	NA	NA	NA	NA	PACSIN2	8423	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	43811216	43811611	43811451	Y	SULT4A1,TTLL1,SCUBE1,MPPED1	MPPED1	NA	NA	NA	NA	MPPED1	6014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	44218722	44218869	44218865	Y	NA	EFCAB6,SULT4A1	NA	NA	NA	NA	EFCAB6	12505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	44417424	44417686	44417555	Y	PARVB	PARVB	NA	NA	NA	NA	PARVB	24333	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	44993593	44993881	44993680	Y	NA	NA	NA	NA	NA	NA	PRR5	68712	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr22	45015871	45016262	45016114	Y	NA	PRR5	NA	NA	NA	NA	PRR5	46331	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	45016324	45016531	45016433	Y	PARVG,PARVG,PRR5	PRR5	NA	NA	NA	NA	PRR5	46062	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	45402294	45403188	45402906	Y	NA	PHF21B	NA	NA	NA	NA	PHF21B	692	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	45403389	45403735	45403573	Y	KIAA0930,PHF21B,PHF21B,PHF21B	PHF21B	NA	NA	NA	NA	PHF21B	145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	45551419	45551722	45551561	Y	NA	NUP50	NA	NA	NA	NA	NUP50	6000	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46374858	46375446	46375153	Y	NA	NA	NA	NA	NA	NA	RP6-109B7.3	72139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46455003	46455485	46455192	Y	NA	RP6-109B7.3,C22orf26,RP6-109B7.4	NA	NA	NA	NA	C22orf26	6979	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46462776	46462894	46462836	Y	NA	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46464940	46465203	46464976	Y	NA	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	1169	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46467914	46468476	46468052	Y	NA	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	4143	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr22	46470082	46470656	46470309	Y	C22orf26	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	6311	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	46472616	46472825	46472697	Y	NA	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	8845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46474643	46475112	46474791	Y	C22orf26	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	10872	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46480881	46481264	46481017	Y	NA	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	17110	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr22	46483894	46484294	46483949	Y	C22orf26	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	20123	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	46495432	46495673	46495573	Y	C22orf26	RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763,PPARA	NA	NA	NA	NA	MIR4763	11773	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	46957537	46957704	46957620	Y	NA	CELSR1,GRAMD4	TRMU,CELSR1,GRAMD4	IMR90	Hi-C	24141950	GRAMD4	12205	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	47126357	47126654	47126612	Y	NA	CERK,TBC1D22A	NA	NA	NA	NA	CERK	5504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	48883958	48884244	48884181	Y	FAM19A5	FAM19A5	NA	NA	NA	NA	FAM19A5	686	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	48886346	48887067	48886885	Y	FAM19A5	FAM19A5	NA	NA	NA	NA	FAM19A5	3074	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	48963094	48963472	48963279	Y	NA	NA	NA	NA	NA	NA	FAM19A5	79822	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	49123378	49123388	49123383	Y	NA	NA	NA	NA	NA	NA	FAM19A5	240106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	49157619	49157940	49157765	Y	NA	NA	NA	NA	NA	NA	FAM19A5	274347	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50262824	50262951	50262946	Y	TUBGCP6,MLC1	BRD1,ZBED4,CRELD2,ALG12	NA	NA	NA	NA	ZBED4	17334	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	50272789	50273094	50272966	Y	NA	ZBED4,CRELD2,ALG12	NA	NA	NA	NA	ZBED4	27299	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50273824	50274276	50274235	Y	TUBGCP6,HDAC10,ZBED4	ZBED4,CRELD2,ALG12	NA	NA	NA	NA	ZBED4	28334	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50329443	50330313	50330025	Y	TUBGCP6,TRABD,PIM3,PANX2,HDAC10,BRD1	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	19337	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50608010	50608409	50608105	Y	MLC1,MOV10L1,MAPK8IP2,MAPK8IP2,FAM116B,SELO,PANX2	PANX2,TRABD,SELO	NA	NA	NA	NA	PANX2	850	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	50667232	50667412	50667320	Y	NA	TRABD,SELO,TUBGCP6,HDAC10,MAPK12,MAPK11	NA	NA	NA	NA	TUBGCP6	14009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50710173	50710402	50710310	Y	MLC1,MOV10L1,MOV10L1,MOV10L1,SHANK3,SBF1,PPP6R2,MAPK8IP2,MAPK8IP2,FAM116B,ACR,MAPK11	TUBGCP6,HDAC10,MAPK12,MAPK11,PLXNB2	NA	NA	NA	NA	MAPK11	2977	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	50741057	50741253	50741136	Y	PIM3,TRABD	MAPK12,MAPK11,PLXNB2,PPP6R2	NA	NA	NA	NA	PLXNB2	2803	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr22	50744748	50744986	50744827	Y	PIM3,TRABD,TYMP,TYMP,ODF3B,PLXNB2	MAPK12,MAPK11,PLXNB2,PPP6R2	NA	NA	NA	NA	PLXNB2	692	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	50784754	50785397	50785059	Y	PPP6R2	PLXNB2,PPP6R2	NA	NA	NA	NA	PPP6R2	5021	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr22	50815545	50815813	50815668	Y	MOV10L1,MOV10L1,SELO,MAPK8IP2,FAM116B	PPP6R2	NA	NA	NA	NA	PPP6R2	35812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50912071	50912698	50912340	Y	NA	SBF1,ADM2,LMF2,NCAPH2	NA	NA	NA	NA	SBF1	617	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr22	50976592	50977006	50976816	Y	PANX2,TRABD,HDAC10,CHKB,SCO2,SCO2,TYMP,TYMP,ODF3B	LMF2,NCAPH2,SCO2,TYMP,ODF3B,SYCE3,CHKB-CPT1B	NA	NA	NA	NA	ODF3B	7583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	2938260	2938635	2938449	Y	NA	NA	NA	NA	NA	NA	TRNT1	227965	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	3177157	3177268	3177188	Y	CRBN	TRNT1,CRBN	NA	NA	NA	NA	TRNT1	10557	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	3975411	3975745	3975578	Y	NA	NA	NA	NA	NA	NA	LRRN1	136290	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	4870806	4870892	4870849	Y	NA	NA	NA	NA	NA	NA	BHLHE40	147909	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	4949670	4949798	4949744	Y	BHLHE40	NA	NA	NA	NA	NA	BHLHE40	69003	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	5028534	5029013	5028702	Y	ITPR1,EDEM1,ARL8B,BHLHE40	BHLHE40	NA	NA	NA	NA	BHLHE40	9733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	5934139	5934433	5934284	Y	NA	NA	NA	NA	NA	NA	EDEM1	706808	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	7393024	7393352	7393188	Y	NA	NA	NA	NA	NA	NA	LMCD1	1148041	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	8508405	8508565	8508485	Y	NA	LMCD1	NA	NA	NA	NA	LMCD1	32828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	9422978	9423353	9423146	Y	SETD5,RAD18,THUMPD3	THUMPD3,SRGAP3,RP11-380O24.1,SETD5,SETD5-AS1	NA	NA	NA	NA	SETD5	13946	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	9749509	9749829	9749669	Y	NA	CPNE9,BRPF1,OGG1	NA	NA	NA	NA	CPNE9	6018	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	11314967	11316155	11315793	Y	HRH1,ATG7	ATG7	NA	NA	NA	NA	ATG7	2972	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	11588161	11588276	11588219	Y	NA	NA	NA	NA	NA	NA	VGLL4	171944	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	11609664	11609798	11609746	Y	NA	NA	NA	NA	NA	NA	VGLL4	150422	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	11688028	11688035	11688032	Y	NA	NA	NA	NA	NA	NA	VGLL4	72185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	11812040	11812191	11812115	Y	NA	NA	NA	NA	NA	NA	VGLL4	51820	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	12137205	12137457	12137242	Y	NA	NA	NA	NA	NA	NA	SYN2	93329	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	12211698	12212069	12211921	Y	PPARG,PPARG	NA	NA	NA	NA	NA	PPARG	114798	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	12229937	12230151	12230065	Y	RAF1	NA	NA	NA	NA	NA	PPARG	96716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	12910559	12910807	12910643	Y	MKRN2	RPL32	CAND2,IQSEC1,RPL32	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL32	29472	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	12917586	12917878	12917745	Y	NA	RPL32	IQSEC1	IMR90	Hi-C	24141950	RPL32	36499	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	13457131	13457321	13457226	Y	NUP210	NUP210	NA	NA	NA	NA	NUP210	2488	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	13493281	13493606	13493395	Y	NA	NUP210,HDAC11,HDAC11-AS1	IQSEC1,NUP210	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HDAC11	25618	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	13526767	13526807	13526787	Y	NA	HDAC11,HDAC11-AS1,FBLN2	NA	NA	NA	NA	HDAC11-AS1	7214	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	14167210	14167731	14167391	Y	TMEM43,XPC	CHCHD4,TMEM43	NA	NA	NA	NA	TMEM43	2770	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	15060728	15061023	15060876	Y	NR2C2	MRPS25	NA	NA	NA	NA	MRPS25	43819	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	15109564	15109704	15109605	Y	ZFYVE20	MRPS25,ZFYVE20	NA	NA	NA	NA	MRPS25	4722	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15443040	15443420	15443273	Y	ANKRD28,METTL6,EAF1,COLQ,SH3BP5,SH3BP5	EAF1,METTL6	NA	NA	NA	NA	EAF1	23442	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15453852	15454017	15453935	Y	NA	EAF1,METTL6	NA	NA	NA	NA	EAF1	12845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15599049	15599493	15599306	Y	ANKRD28,SH3BP5,METTL6,EAF1,COLQ	BTD,HACL1	NA	NA	NA	NA	BTD	41355	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15677848	15678314	15678139	Y	ANKRD28,SH3BP5,SH3BP5,EAF1	BTD,HACL1	NA	NA	NA	NA	HACL1	36510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15704167	15704382	15704274	Y	ANKRD28,CAPN7	NA	NA	NA	NA	NA	HACL1	62829	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	15783171	15783247	15783208	Y	NA	NA	NA	NA	NA	NA	ANKRD28	116031	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15813744	15814005	15813933	Y	SH3BP5,SH3BP5,EAF1,ANKRD28	NA	BTD	IMR90	Hi-C	24141950	ANKRD28	85273	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	15901875	15902313	15902310	Y	METTL6,ANKRD28	ANKRD28	NA	NA	NA	NA	ANKRD28	2597	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	16352603	16353027	16352777	Y	RFTN1,OXNAD1	DPH3,OXNAD1	NA	NA	NA	NA	OXNAD1	47897	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	16373323	16373612	16373405	Y	ANKRD28,OXNAD1	NA	NA	NA	NA	NA	OXNAD1	68617	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17063194	17063491	17063326	Y	NA	NA	NA	NA	NA	NA	PLCL2	221035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17064555	17064748	17064639	Y	NA	NA	NA	NA	NA	NA	PLCL2	222396	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17229616	17229788	17229702	Y	NA	NA	NA	NA	NA	NA	PLCL2	387457	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17248138	17248312	17248225	Y	NA	NA	NA	NA	NA	NA	PLCL2	405979	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17307041	17307245	17307143	Y	NA	NA	NA	NA	NA	NA	PLCL2	464882	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17378312	17378639	17378476	Y	NA	NA	NA	NA	NA	NA	PLCL2	536153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17404652	17404912	17404782	Y	NA	NA	NA	NA	NA	NA	PLCL2	562493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17441926	17442172	17442040	Y	PLCL2	NA	NA	NA	NA	NA	PLCL2	599767	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17542863	17543019	17542979	Y	NA	NA	NA	NA	NA	NA	PLCL2	700704	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17543312	17543623	17543461	Y	NA	NA	NA	NA	NA	NA	PLCL2	701153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17674085	17674191	17674137	Y	NA	NA	NA	NA	NA	NA	TBC1D5	810118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	17913596	17913897	17913750	Y	NA	NA	NA	NA	NA	NA	TBC1D5	570412	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	18278854	18279224	18279039	Y	NA	NA	NA	NA	NA	NA	TBC1D5	205085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	18580242	18580387	18580280	Y	NA	RAD23BP1	NA	NA	NA	NA	RAD23BP1	2077	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr3	19188369	19188866	19188531	Y	NA	KCNH8	NA	NA	NA	NA	KCNH8	423	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	19993428	19993925	19993635	Y	KAT2B,RAB5A	EFHB,RAB5A	NA	NA	NA	NA	RAB5A	6857	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	20098670	20099049	20098920	Y	RAB5A	KAT2B	NA	NA	NA	NA	KAT2B	19155	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	20190984	20191185	20191115	Y	SGOL1,SGOL1	SGOL1-AS1,SGOL1	NA	NA	NA	NA	SGOL1-AS1	22551	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	20205868	20206079	20206039	Y	SGOL1,SGOL1	SGOL1-AS1,SGOL1	NA	NA	NA	NA	SGOL1-AS1	7657	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	21722785	21723001	21722895	Y	NA	NA	NA	NA	NA	NA	ZNF385D	689811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	23206478	23206499	23206488	Y	NA	UBE2E2	UBE2E1,UBE2E2	IMR90	Hi-C	24141950	UBE2E2	36012	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	23700744	23701062	23700980	Y	NA	NA	UBE2E2,UBE2E1	IMR90	Hi-C	24141950	UBE2E1	144332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	23935594	23935945	23935770	Y	NA	RPL15,NR1D2	NA	NA	NA	NA	RPL15	20091	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	27448684	27449023	27448831	Y	NA	NEK10	NEK10	IMR90	Hi-C	24141950	NEK10	39733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	27524458	27524952	27524717	Y	NA	SLC4A7,RNU1-96P	NA	NA	NA	NA	SLC4A7	547	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	27674607	27674970	27674793	Y	NA	AC098614.2	SLC4A7,NEK10	IMR90	Hi-C	24141950	AC098614.2	2140	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr3	28713649	28713858	28713754	Y	ZCWPW2	NA	NA	NA	NA	NA	LINC00693	99367	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	29214475	29214634	29214556	Y	NA	NA	RBMS3	IMR90	Hi-C	24141950	RBMS3	105839	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	29288264	29288669	29288439	Y	NA	RBMS3	RBMS3	IMR90	Hi-C	24141950	RBMS3	31804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	29568670	29568984	29568828	Y	RBMS3	NA	NA	NA	NA	NA	RBMS3	248197	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	29660032	29660218	29660060	Y	NA	NA	NA	NA	NA	NA	RBMS3	339559	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	29725037	29725420	29725261	Y	NA	NA	NA	NA	NA	NA	RBMS3	404564	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	31055934	31056092	31056013	Y	NA	NA	NA	NA	NA	NA	TGFBR2	409940	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	31584966	31585359	31585050	Y	NA	STT3B	NA	NA	NA	NA	STT3B	12836	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	31690891	31691368	31691073	Y	ZNF860,OSBPL10	NA	NA	NA	NA	NA	STT3B	118761	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	31737462	31737733	31737598	Y	NA	NA	NA	NA	NA	NA	STT3B	165332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	32443431	32443555	32443473	Y	CMTM7	CMTM7	NA	NA	NA	NA	CMTM7	12268	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	32526070	32526309	32526138	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	16591	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	32535422	32535827	32535806	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	7073	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	32549205	32549429	32549313	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	6305	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	32857811	32858132	32857909	Y	NA	AC139452.2	NA	NA	NA	NA	AC139452.2	32673	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	33040516	33040939	33040781	Y	NA	SEC13P1	NA	NA	NA	NA	SEC13P1	32416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	33081513	33081785	33081661	Y	NA	SEC13P1	NA	NA	NA	NA	SEC13P1	8158	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	33086079	33086426	33086309	Y	CCR4	SEC13P1,TMPPE	NA	NA	NA	NA	SEC13P1	12724	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	33554713	33555077	33554895	Y	NA	NA	NA	NA	NA	NA	UBP1	73850	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	33590851	33591213	33591209	Y	NA	NA	NA	NA	NA	NA	UBP1	109988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	33599519	33599564	33599543	Y	NA	NA	NA	NA	NA	NA	UBP1	118656	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	33638872	33639200	33639124	Y	NA	NA	NA	NA	NA	NA	CLASP2	118648	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	33837400	33837658	33837523	Y	CLASP2,PDCD6IP	PDCD6IP	NA	NA	NA	NA	PDCD6IP	186	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	36805780	36806178	36806113	Y	NA	NA	NA	NA	NA	NA	TRANK1	178370	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	37011455	37011827	37011685	Y	LRRFIP2,ITGA9,GOLGA4,MLH1,MLH1,EPM2AIP1	TRANK1,EPM2AIP1,MLH1,RPL29P11	NA	NA	NA	NA	EPM2AIP1	20968	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	37164159	37164535	37164493	Y	NA	NA	MLH1	IMR90	Hi-C	24141950	LRRFIP2	58645	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	37901883	37902306	37902042	Y	CTDSPL	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	432	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	37904355	37904605	37904570	Y	NA	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	2904	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	38072885	38073008	38072928	Y	PLCD1	VILL,PLCD1	NA	NA	NA	NA	PLCD1	3632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	38210566	38210752	38210690	Y	VILL,MYD88,OXSR1	ACAA1,MYD88,OXSR1	NA	NA	NA	NA	OXSR1	5986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	38497232	38497482	38497354	Y	NA	ACVR2B,EXOG	NA	NA	NA	NA	ACVR2B	3890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	38568637	38569221	38568871	Y	SCN10A,SCN11A,SLC22A14,EXOG	EXOG	NA	NA	NA	NA	EXOG	33019	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	39193999	39194528	39194467	Y	NA	TTC21A,GORASP1	NA	NA	NA	NA	CSRNP1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	39222162	39222653	39222434	Y	NA	CSRNP1	NA	NA	NA	NA	CSRNP1	28109	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	39712999	39713450	39713220	Y	NA	NA	NA	NA	NA	NA	MYRIP	134955	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	40491258	40491489	40491375	Y	NA	ENTPD3-AS1,RPL14,ZNF619	NA	NA	NA	NA	ENTPD3-AS1	1331	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	40657038	40657268	40657076	Y	NA	EEF1GP3	ULK4	IMR90	Hi-C	24141950	EEF1GP3	20053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	42067110	42067525	42067205	Y	ULK4	TRAK1	TRAK1	IMR90	Hi-C	24141950	TRAK1	13816	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	42237448	42237989	42237678	Y	NA	NA	NA	NA	NA	NA	CCK	67710	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	42725997	42726123	42726060	Y	NA	NA	NA	NA	NA	NA	SEC22C	85425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	43368782	43368949	43368860	Y	NA	SNRK	NA	NA	NA	NA	SNRK	42778	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	43427917	43428246	43428244	Y	NA	NA	NA	NA	NA	NA	RP11-353H3.1	97126	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	44040259	44040834	44040651	Y	NA	NA	ANO10	IMR90	Hi-C	24141950	ANO10	309173	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr3	44092844	44093119	44092982	Y	NA	NA	FAM198A	IMR90	Hi-C	24141950	ANO10	361758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	44621262	44622718	44622436	Y	NA	ZNF660,ZNF197	NA	NA	NA	NA	ZNF197	1662	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	44652575	44652865	44652702	Y	ZNF445,ZNF502,ZNF501,ZNF167,ZNF660,ZNF197	ZNF660,ZNF197,ZNF35	NA	NA	NA	NA	ZNF197	28195	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	44654573	44654874	44654724	Y	ZNF445,ZNF501,ZNF167,ZNF660,ZNF197	ZNF660,ZNF197,ZNF35	NA	NA	NA	NA	ZNF197	30193	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	44697594	44698203	44697878	Y	NA	ZNF35	NA	NA	NA	NA	ZNF35	9375	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	45175300	45175656	45175542	Y	NA	CDCP1,RPS24P8	NA	NA	NA	NA	CDCP1	10258	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	45512532	45512880	45512706	Y	NA	NA	NA	NA	NA	NA	LIMD1	82006	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	45681547	45681721	45681608	Y	LIMD1	SACM1L	NA	NA	NA	NA	SACM1L	46827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	45684271	45684561	45684439	Y	NA	SACM1L	NA	NA	NA	NA	SACM1L	43987	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	46029485	46029815	46029641	Y	CCR5,CCRL2,CCRL2,CCR1,FYCO1	FYCO1	NA	NA	NA	NA	FYCO1	5501	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	46253735	46253871	46253786	Y	NA	NA	SLC6A20,CCR1,CCR5,CCRL2	IMR90	Hi-C	24141950	FYCO1	218419	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	47002825	47003246	47003204	Y	NA	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	15927	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	47704557	47705253	47705047	Y	SETD2	NA	NA	NA	NA	NA	CSPG5	84275	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	47845454	47845505	47845480	Y	DHX30	SMARCC1,DHX30	NA	NA	NA	NA	DHX30	3055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	47879431	47879730	47879653	Y	SPINK8	DHX30	NA	NA	NA	NA	DHX30	37032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	47991974	47992099	47992083	Y	CCDC51,ATRIP,SMARCC1,CDC25A	NA	NA	NA	NA	NA	MAP4	136670	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	48332679	48332937	48332732	Y	SPINK8	NME6	NA	NA	NA	NA	NME6	8238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	48469321	48469953	48469633	Y	NA	CCDC51,ATRIP,TREX1	NA	NA	NA	NA	PLXNB1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	48967045	48967316	48967140	Y	NA	SLC25A20,ARIH2	NA	NA	NA	NA	ARIH2	12791	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	49123301	49123671	49123633	Y	NA	QRICH1,QARS,USP19,LAMB2	NA	NA	NA	NA	QRICH1	6125	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	49358291	49358883	49358713	Y	ARIH2,C3orf71,NDUFAF3,DALRD3,QRICH1,USP19,UBA7,IP6K1,USP4	USP4,GPX1	NA	NA	NA	NA	USP4	17262	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	49696171	49696492	49696217	Y	NA	APEH,RNF123,MST1	APEH,MST1,RNF123	IMR90	Hi-C	24141950	APEH	12943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	50204844	50205012	50204945	Y	NA	SEMA3F,SLC38A3	NA	NA	NA	NA	SEMA3F	14366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	50243484	50243685	50243589	Y	HYAL1,SLC38A3	SLC38A3,GNAI2	NA	NA	NA	NA	SLC38A3	2805	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	50264852	50265230	50265012	Y	TUSC2,IP6K1,GNAI2,GNAI2	SLC38A3,GNAI2	NA	NA	NA	NA	GNAI2	3128	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	50983523	50983672	50983598	Y	NA	NA	NA	NA	NA	NA	DOCK3	272851	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	51573530	51573858	51573781	Y	VPRBP,RAD54L2	VPRBP	NA	NA	NA	NA	VPRBP	41520	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	52009750	52010220	52010093	Y	NA	RRP9,PARP3,PCBP4,ABHD14A,ABHD14A-ACY1,ACY1,ABHD14B,RPL29	NA	NA	NA	NA	ABHD14A-ACY1,ACY1	2684	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	52079728	52079827	52079778	Y	DUSP7	DUSP7	NA	NA	NA	NA	DUSP7	8739	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	52091161	52091675	52091445	Y	TWF2,DUSP7	DUSP7	NA	NA	NA	NA	DUSP7	2595	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	52502448	52502781	52502494	Y	ABHD14B,NISCH	NISCH	NA	NA	NA	NA	NISCH	15314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	52503087	52503472	52503331	Y	ABHD14B,NISCH	NISCH	NA	NA	NA	NA	NISCH	15953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	52590623	52590962	52590793	Y	NA	NT5DC2	NA	NA	NA	NA	NT5DC2	23553	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	52625235	52625395	52625315	Y	DNAH1,PBRM1	NA	NA	NA	NA	NA	NT5DC2	58165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	52926819	52927340	52927162	Y	PBRM1,SFMBT1,SFMBT1,PRKCD,DCP1A,TMEM110	TMEM110-MUSTN1,TMEM110	NA	NA	NA	NA	TMEM110-MUSTN1	2238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	53136597	53136930	53136874	Y	PBRM1,PBRM1,TMEM110,DCP1A,PRKCD	RFT1	NA	NA	NA	NA	RFT1	25548	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	53362706	53362961	53362819	Y	NA	DCP1A	NA	NA	NA	NA	DCP1A	16693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	53897423	53897785	53897604	Y	NA	CHDH,IL17RB,ACTR8,SELK	NA	NA	NA	NA	ACTR8	16444	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	55255839	55256126	55255983	Y	NA	NA	WNT5A,CACNA2D3,ERC2	IMR90	Hi-C	24141950	WNT5A	265847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	55364571	55364745	55364625	Y	NA	NA	CACNA2D3,WNT5A,ERC2,C3orf51	IMR90	Hi-C	24141950	WNT5A	157228	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	56106137	56106188	56106158	Y	NA	NA	NA	NA	NA	NA	ERC2	394203	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	57102609	57102968	57102819	Y	ARHGEF3	ARHGEF3	NA	NA	NA	NA	ARHGEF3	8389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	57555554	57555589	57555572	Y	FAM116A,PDE12	DNAH12,PDE12,ARF4	NA	NA	NA	NA	PDE12	15551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	57566206	57566518	57566262	Y	NA	DNAH12,PDE12,ARF4	NA	NA	NA	NA	ARF4	15429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	57572232	57572342	57572306	Y	NA	DNAH12,PDE12,ARF4	NA	NA	NA	NA	ARF4	9605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	57639210	57639572	57639391	Y	SLMAP,FAM116A	RP11-755B10.3	NA	NA	NA	NA	RP11-755B10.3	37360	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	57874517	57874643	57874579	Y	NA	NA	NA	NA	NA	NA	FLNB	117484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	58162589	58162663	58162637	Y	KCTD6	NA	NA	NA	NA	NA	ABHD6	58570	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	58321418	58321818	58321477	Y	NA	RPP14,PXK	NA	NA	NA	NA	PXK	4811	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	58339773	58340193	58340113	Y	NA	RPP14,PXK	NA	NA	NA	NA	PXK	23166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	58412465	58412623	58412544	Y	NA	PDHB	NA	NA	NA	NA	PDHB	4961	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	59851860	59851984	59851945	Y	NA	NA	NA	NA	NA	NA	C3orf67	818050	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	60392594	60392829	60392710	Y	NA	NA	NA	NA	NA	NA	FHIT	842304	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	60715683	60716344	60716091	Y	NA	NA	NA	NA	NA	NA	FHIT	518789	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	61548977	61549431	61549203	Y	NA	PTPRG	NA	NA	NA	NA	PTPRG	3734	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	61579072	61579152	61579112	Y	PTPRG	PTPRG	NA	NA	NA	NA	PTPRG	33829	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	61828479	61828865	61828501	Y	PTPRG	NA	NA	NA	NA	NA	RPL10AP6	101699	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	62008406	62008528	62008467	Y	NA	NA	NA	NA	NA	NA	RPL10AP6	281626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	62214246	62214436	62214339	Y	NA	NA	NA	NA	NA	NA	RPL10AP6	487466	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	62495462	62495656	62495561	Y	FEZF2,CADPS	NA	NA	NA	NA	NA	LINC00698	438449	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	62572991	62573174	62573036	Y	NA	NA	NA	NA	NA	NA	LINC00698	360931	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	63848274	63848561	63848418	Y	NA	THOC7,ATXN7	NA	NA	NA	NA	ATXN7	41	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	64176913	64177146	64177006	Y	NA	NA	LOC100652759	IMR90	Hi-C	24141950	PSMD6	169255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	65909802	65910182	65909992	Y	NA	NA	NA	NA	NA	NA	MAGI1	112327	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	66467141	66467203	66467172	Y	LRIG1	NA	NA	NA	NA	NA	LRIG1	82484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	66491612	66491762	66491706	Y	NA	NA	NA	NA	NA	NA	LRIG1	57925	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	66543351	66543557	66543448	Y	NA	LRIG1	NA	NA	NA	NA	LRIG1	6130	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	67512199	67512308	67512254	Y	NA	NA	NA	NA	NA	NA	SUCLG2	190730	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	67938562	67938814	67938688	Y	NA	NA	NA	NA	NA	NA	RP11-81N13.1	235441	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	69135158	69135511	69135504	Y	NA	TMF1,UBA3,ARL6IP5	NA	NA	NA	NA	ARL6IP5	3063	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	69790676	69790712	69790690	Y	MITF	MITF	NA	NA	NA	NA	MITF	4090	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	70175230	70175612	70175604	Y	NA	NA	NA	NA	NA	NA	MITF	388644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71255455	71255729	71255602	Y	NA	NA	NA	NA	NA	NA	FOXP1	375411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71298409	71298581	71298470	Y	EIF4E3	NA	NA	NA	NA	NA	FOXP1	332559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71389278	71389380	71389331	Y	NA	NA	NA	NA	NA	NA	FOXP1	241760	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71445520	71445701	71445627	Y	EIF4E3	NA	NA	NA	NA	NA	FOXP1	185439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71465988	71466289	71466193	Y	NA	NA	NA	NA	NA	NA	FOXP1	164851	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71628829	71629563	71629383	Y	EIF4E3	FOXP1	NA	NA	NA	NA	FOXP1	1577	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	71892336	71892649	71892448	Y	FOXP1,EIF4E3,GPR27,EIF4E3,EIF4E3,PROK2	NA	SHQ1	IMR90	Hi-C	24141950	EIF4E3	90412	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	72977666	72978074	72977791	Y	RYBP	GXYLT2,FTH1P23	NA	NA	NA	NA	FTH1P23	1471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	73159773	73160145	73159855	Y	EBLN2	NA	PDZRN3,CACNA1D	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CCDC75P1	70297	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	75765975	75766371	75766287	Y	NA	NA	NA	NA	NA	NA	ZNF717	66363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	78848211	78848429	78848320	Y	NA	NA	NA	NA	NA	NA	ROBO1	966536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	78934560	78934824	78934693	Y	NA	NA	NA	NA	NA	NA	ROBO1	880141	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	85071263	85071596	85071400	Y	NA	NA	NA	NA	NA	NA	CADM2	65131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	86999128	86999300	86999212	Y	CHMP2B	VGLL3	NA	NA	NA	NA	VGLL3	38969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	87101402	87101690	87101545	Y	NA	NA	NA	NA	NA	NA	VGLL3	63133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	88151728	88152092	88151734	Y	NA	C3orf38,CGGBP1	NA	NA	NA	NA	C3orf38	44801	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	88208920	88209337	88209164	Y	CGGBP1,C3orf38	C3orf38,CGGBP1	NA	NA	NA	NA	CGGBP1	11885	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	88255753	88255858	88255769	Y	HTR1F	NA	NA	NA	NA	NA	CGGBP1	58718	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	96336052	96336669	96336607	Y	NA	NA	NA	NA	NA	NA	EPHA6	194756	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr3	97211520	97211837	97211678	Y	NA	NA	NA	NA	NA	NA	ARL6	269528	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	97387840	97388118	97387927	Y	OR5AC2,EPHA6	NA	NA	NA	NA	NA	ARL6	93247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	98291884	98292296	98292041	Y	OR5H6,OR5H2,CLDND1	CPOX	NA	NA	NA	NA	CPOX	18271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	98414776	98414949	98414863	Y	ST3GAL6	NA	ST3GAL6	IMR90	Hi-C	24141950	CPOX	104209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	98504725	98505044	98504856	Y	OR5K4,ST3GAL6	NA	NA	NA	NA	NA	DCBLD2	113489	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	98509261	98509585	98509483	Y	NA	NA	NA	NA	NA	NA	DCBLD2	108948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	98572463	98572830	98572744	Y	NA	DCBLD2	NA	NA	NA	NA	DCBLD2	45703	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	99224992	99225368	99225241	Y	NA	NA	MIR548G,COL8A1	IMR90	Hi-C	24141950	COL8A1	129951	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	99581173	99581391	99581282	Y	NA	NA	NA	NA	NA	NA	COL8A1	225854	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	99587238	99587483	99587373	Y	NA	NA	NA	NA	NA	NA	COL8A1	231919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	100079179	100079422	100079420	Y	NA	NIT2,LNP1,TOMM70A	NA	NA	NA	NA	NIT2	27634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	100088429	100088702	100088566	Y	NA	NIT2,LNP1,TOMM70A	NA	NA	NA	NA	LNP1	29335	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	100244695	100244934	100244873	Y	NA	TMEM45A	NA	NA	NA	NA	TMEM45A	35232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	100418212	100418409	100418233	Y	GPR128	TFG	NA	NA	NA	NA	TFG	7796	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	100784871	100785104	100785043	Y	ABI3BP	NA	ABI3BP	IMR90	Hi-C	24141950	ABI3BP	74512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	101046086	101046265	101046174	Y	ZBTB11,SENP7,CEP97	IMPG2	NA	NA	NA	NA	IMPG2	8682	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	101146332	101146443	101146386	Y	NA	NA	NA	NA	NA	NA	SENP7	83642	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	101403455	101403770	101403678	Y	SENP7,RG9MTD1,PCNP,NFKBIZ,ZBTB11,RPL24	ZBTB11,CEP97	NA	NA	NA	NA	RPL24	0	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr3	101444542	101444901	101444615	Y	FAM55C,FAM55C,CEP97	RPL24,CEP97	NA	NA	NA	NA	CEP97	3773	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	101609607	101609840	101609738	Y	ZBTB11,NFKBIZ,NFKBIZ	NA	FAM55C	IMR90	Hi-C	24141950	NFKBIZ	64772	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	101953360	101953524	101953443	Y	NA	NA	FAM55C,NFKBIZ,LOC152225	IMR90	Hi-C	24141950	NFKBIZ	408525	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	105316935	105317233	105317084	Y	NA	NA	NA	NA	NA	NA	ALCAM	233182	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	105395533	105395739	105395657	Y	NA	NA	NA	NA	NA	NA	CBLB	190657	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	105416337	105416655	105416542	Y	NA	NA	NA	NA	NA	NA	CBLB	169741	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	106632759	106633104	106632932	Y	NA	NA	NA	NA	NA	NA	LINC00883	324435	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	107376610	107376921	107376801	Y	NA	NA	NA	NA	NA	NA	BBX	136827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	107503481	107503523	107503501	Y	NA	NA	NA	NA	NA	NA	BBX	263698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	107504411	107504731	107504449	Y	NA	NA	NA	NA	NA	NA	BBX	264628	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	107877189	107877419	107877316	Y	MYH15,CD47	NA	NA	NA	NA	NA	IFT57	61998	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	110800210	110800608	110800220	Y	NA	PVRL3	NA	NA	NA	NA	PVRL3	13292	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	112182390	112182567	112182476	Y	NA	NA	NA	NA	NA	NA	SLC35A5	95989	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	112436805	112436974	112436889	Y	NA	NA	CD200R1	IMR90	Hi-C	24141950	CCDC80	70428	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	112494891	112495176	112495106	Y	ATG3	NA	GTPBP8	IMR90	Hi-C	24141950	CCDC80	128514	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	112531892	112532184	112532038	Y	NA	NA	NA	NA	NA	NA	CCDC80	165515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	112543206	112543267	112543237	Y	C3orf17	NA	NA	NA	NA	NA	GTPBP8	164498	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	112577470	112577712	112577653	Y	NA	NA	CD200R1L,CD200R1	IMR90	Hi-C	24141950	GTPBP8	130053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	112885717	112885943	112885795	Y	NA	BOC	BOC,WDR52,KIAA2018,SIDT1	IMR90	Hi-C	24141950	BOC	41907	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	113254837	113255012	113254902	Y	NA	SPICE1,SIDT1	NA	NA	NA	NA	SIDT1	5694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	113701770	113701838	113701802	Y	KIAA1407,DRD3,ZDHHC23	QTRTD1	NA	NA	NA	NA	QTRTD1	20842	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	113704407	113704728	113704558	Y	SIDT1,KIAA2018,KIAA1407,ZDHHC23	QTRTD1	NA	NA	NA	NA	QTRTD1	17952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	114144881	114145214	114145066	Y	ZBTB20	NA	NA	NA	NA	NA	KIAA1407	371421	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	114229118	114229529	114229296	Y	ZBTB20	NA	NA	NA	NA	NA	KIAA1407	455658	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	114500516	114500693	114500605	Y	NA	NA	NA	NA	NA	NA	ZBTB20	363425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	114784892	114785127	114785010	Y	NA	NA	NA	NA	NA	NA	ZBTB20	78991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	115502758	115503253	115502970	Y	NA	NA	NA	NA	NA	NA	GAP43	162587	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	115503263	115503751	115503546	Y	NA	NA	NA	NA	NA	NA	GAP43	163092	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	115558428	115558819	115558693	Y	GAP43	NA	NA	NA	NA	NA	GAP43	218257	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	115696572	115696769	115696673	Y	NA	NA	NA	NA	NA	NA	GAP43	356401	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	115717910	115718046	115717986	Y	NA	NA	NA	NA	NA	NA	GAP43	377739	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	115790074	115790198	115790193	Y	NA	NA	NA	NA	NA	NA	GAP43	449903	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	115863058	115863426	115863241	Y	LSAMP	NA	NA	NA	NA	NA	GAP43	522887	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	115941110	115941531	115941311	Y	NA	NA	NA	NA	NA	NA	GAP43	600939	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	116000360	116000729	116000671	Y	NA	NA	NA	NA	NA	NA	GAP43	660189	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	116060787	116061142	116061019	Y	NA	NA	NA	NA	NA	NA	PTMAP8	682403	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	116064864	116065195	116065030	Y	LSAMP	NA	NA	NA	NA	NA	PTMAP8	678350	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	116118770	116119229	116119052	Y	NA	NA	NA	NA	NA	NA	PTMAP8	624316	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	116138506	116138899	116138890	Y	LSAMP	NA	NA	NA	NA	NA	PTMAP8	604646	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	116145742	116145918	116145863	Y	NA	NA	NA	NA	NA	NA	PTMAP8	597627	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr3	117441288	117441601	117441524	Y	NA	NA	NA	NA	NA	NA	LSAMP	272494	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	117568330	117568637	117568613	Y	NA	NA	NA	NA	NA	NA	LSAMP	145458	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	117626867	117627207	117627037	Y	NA	NA	NA	NA	NA	NA	LSAMP	86888	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	118626838	118627009	118626961	Y	NA	NA	NA	NA	NA	NA	IGSF11	235906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	119144576	119144994	119144966	Y	ARHGAP31,COX17,ADPRH	TMEM39A,POGLUT1	NA	NA	NA	NA	TMEM39A	40683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	119237356	119237846	119237595	Y	ARHGAP31,COX17,CD80,ADPRH,TMEM39A,POGLUT1	TIMMDC1	NA	NA	NA	NA	TIMMDC1	21977	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	119238487	119238668	119238501	Y	NA	TIMMDC1	NA	NA	NA	NA	TIMMDC1	23108	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	119644387	119644860	119644721	Y	NA	NA	NA	NA	NA	NA	GSK3B	166404	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	119798224	119798287	119798255	Y	NA	GSK3B,RP11-18H7.1	NA	NA	NA	NA	GSK3B	12977	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	120065370	120065692	120065535	Y	NA	LRRC58	NA	NA	NA	NA	LRRC58	494	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	120167583	120167922	120167648	Y	NA	FSTL1	NA	NA	NA	NA	FSTL1	178	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	120277715	120278240	120277932	Y	NA	NDUFB4	FSTL1,GPR156,LRRC58,NR1I2,NDUFB4,GTF2E1	IMR90	Hi-C	24141950	NDUFB4	34916	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	120492875	120493095	120492951	Y	NA	GTF2E1,RABL3	NA	NA	NA	NA	RABL3	33035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	120493479	120494008	120493729	Y	NA	GTF2E1,RABL3	NA	NA	NA	NA	RABL3	33639	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	120819033	120819273	120819055	Y	NA	NA	NA	NA	NA	NA	STXBP5L	194114	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	120963354	120963782	120963547	Y	STXBP5L	NA	NA	NA	NA	NA	RPL7AP11	247175	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	121149194	121149225	121149210	Y	NA	NA	NA	NA	NA	NA	RPL7AP11	61732	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	121520314	121520680	121520641	Y	NA	IQCB1,EAF2	NA	NA	NA	NA	IQCB1	31246	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	121550824	121551193	121550988	Y	NA	IQCB1,EAF2	NA	NA	NA	NA	IQCB1	733	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	121714355	121714445	121714384	Y	HCLS1,CSTA,CD86	NA	NA	NA	NA	NA	EAF2	162325	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	122208819	122209075	122208974	Y	NA	KPNA1	NA	NA	NA	NA	KPNA1	22717	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	122295052	122295483	122295147	Y	CD86,PARP9,DTX3L,PARP9,PARP9,HSPBAP1,DIRC2,PARP15,PARP15,PARP14	DTX3L,PARP9	NA	NA	NA	NA	PARP9	13628	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	122467278	122467457	122467368	Y	NA	HSPBAP1,DIRC2	NA	NA	NA	NA	HSPBAP1	43214	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	122476470	122476801	122476636	Y	NA	HSPBAP1,DIRC2	NA	NA	NA	NA	HSPBAP1	33870	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	122493180	122493752	122493620	Y	CSTA,KPNA1,PARP9,DTX3L,PARP9,PARP9,PARP14,HSPBAP1,DIRC2	HSPBAP1,DIRC2	NA	NA	NA	NA	HSPBAP1	16919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	123131610	123131782	123131703	Y	MYLK,ADCY5,ADCY5	NA	NA	NA	NA	NA	PTPLB	170250	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	123229622	123229815	123229688	Y	NA	NA	NA	NA	NA	NA	PTPLB	72217	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	123263878	123263964	123263921	Y	ADCY5,ADCY5	PTPLB,MYLK-AS1	NA	NA	NA	NA	PTPLB	38068	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	123371138	123371512	123371325	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	68749	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	123407272	123407514	123407399	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	104883	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	123756806	123757178	123756992	Y	NA	KALRN	KALRN,CCDC14	IMR90	Hi-C	24141950	KALRN	39692	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	123824591	123825032	123824690	Y	NA	KALRN	NA	NA	NA	NA	KALRN	27721	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	123976892	123977339	123977059	Y	NA	NA	NA	NA	NA	NA	KALRN	180022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	124419861	124420177	124419915	Y	KALRN	UMPS	NA	NA	NA	NA	UMPS	27036	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	125200225	125200611	125200423	Y	NA	SNX4	NA	NA	NA	NA	SNX4	36430	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	125235229	125235600	125235483	Y	NA	SNX4	NA	NA	NA	NA	SNX4	1441	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	125709142	125709481	125709414	Y	ZXDC,CCDC37	NA	NA	NA	NA	NA	RP11-124N2.1	91582	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr3	126074775	126075511	126074965	Y	ALDH1L1,UROC1,CCDC37,KLF15	CCDC37	NA	NA	NA	NA	CCDC37	36271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	126359707	126359720	126359714	Y	NA	TXNRD3NB,TXNRD3	NA	NA	NA	NA	TXNRD3	12278	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	126391611	126391660	126391640	Y	NA	TXNRD3,CHCHD6	NA	NA	NA	NA	TXNRD3	19613	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	126854229	126854593	126854376	Y	TXNRD3	NA	NUP210P1,CHCHD6	IMR90	Hi-C	24141950	PLXNA1	148792	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	127265985	127266382	127266013	Y	NA	MCM2,TPRA1	CHCHD6	IMR90	Hi-C	24141950	MCM2	48684	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	127404993	127405883	127405741	Y	MGLL	ABTB1	NA	NA	NA	NA	ABTB1	15215	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	127416375	127416550	127416435	Y	NA	ABTB1	NA	NA	NA	NA	ABTB1	26597	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	127453672	127453937	127453742	Y	TPRA1,TPRA1,TPRA1,MGLL,MGLL	NA	NA	NA	NA	NA	ABTB1	63894	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	127487223	127487760	127487461	Y	TPRA1,TPRA1,TPRA1,MGLL,MGLL	NA	NA	NA	NA	NA	MGLL	52291	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	127539467	127539812	127539513	Y	MGLL,MGLL	MGLL	NA	NA	NA	NA	MGLL	239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	128135736	128135843	128135790	Y	GATA2,GATA2,GATA2,C3orf27,DNAJB8	NA	NA	NA	NA	NA	RP11-475N22.4	70212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	128216520	128216923	128216625	Y	EEFSEC,DNAJB8,GATA2,GATA2,GATA2	RP11-475N22.4	GATA2,C3orf27,RUVBL1,EEFSEC,DNAJB8,DNAJB8-AS1	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-475N22.4	10465	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	128366732	128367045	128366901	Y	NA	RPN1	NA	NA	NA	NA	RPN1	30873	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	128446542	128446927	128446583	Y	NA	RPN1,RAB7A,FTH1P4	NA	NA	NA	NA	RAB7A	3577	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	128564550	128565114	128564776	Y	DNAJB8,KIAA1257	ACAD9	NA	NA	NA	NA	ACAD9	31325	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	128745839	128746109	128746044	Y	NA	KIAA1257	NA	NA	NA	NA	KIAA1257	26306	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	128831103	128831496	128831287	Y	NA	RAB43,ISY1-RAB43,ISY1	NA	NA	NA	NA	RAB43	8148	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	128946609	128946967	128946881	Y	MBD4,KIAA1257,GP9,RAB43,ISY1,CNBP	CNBP	KIAA1257,CCDC48,ISY1-RAB43,CNBP,COPG1,GP9,C3orf37	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CNBP	45844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	129311648	129311919	129311783	Y	PLXND1	PLXND1	NA	NA	NA	NA	PLXND1	11742	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	129519745	129520139	129519943	Y	H1FOO	NA	NA	NA	NA	NA	TMCC1	90280	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	129543558	129543741	129543650	Y	MBD4,H1FOO,TMCC1,TMCC1	NA	NA	NA	NA	NA	TMCC1	66678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	130637982	130638444	130638066	Y	NA	NA	NA	NA	NA	NA	ATP2C1	70543	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	131197540	131197572	131197556	Y	NA	MRPL3	NA	NA	NA	NA	MRPL3	22255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	133295128	133295300	133295215	Y	NA	CDV3	NA	NA	NA	NA	CDV3	4554	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	133646484	133646682	133646583	Y	NA	RAB6B	NA	NA	NA	NA	RAB6B	33804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	135827453	135827844	135827484	Y	PPP2R3A	NA	NA	NA	NA	NA	MSL2	86239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	136153802	136154197	136154172	Y	NA	NA	NA	NA	NA	NA	PCCB	186654	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	136448168	136448437	136448423	Y	NA	STAG1	NA	NA	NA	NA	STAG1	20783	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	136466232	136466235	136466234	Y	NA	STAG1	NA	NA	NA	NA	STAG1	2985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	136563637	136563997	136563817	Y	NA	RP11-85F14.5,NCK1	NA	NA	NA	NA	RP11-85F14.5	14899	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	136571906	136572239	136572061	Y	TMEM22	RP11-85F14.5,NCK1	NA	NA	NA	NA	RP11-85F14.5	6657	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	136631651	136631818	136631718	Y	NA	NA	NA	NA	NA	NA	NCK1	52601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	137768870	137769254	137769106	Y	NA	NA	NA	NA	NA	NA	DZIP1L	63406	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	138582294	138582582	138582441	Y	MRPS22	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	30514	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	139064285	139064552	139064299	Y	NA	COPB2,RP11-319G6.1	NA	NA	NA	NA	COPB2	42022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	139082145	139082521	139082356	Y	PRR23A,PRR23B,PRR23C	COPB2,RP11-319G6.1	NA	NA	NA	NA	COPB2	24053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	139715933	139715982	139715958	Y	NA	NA	NA	NA	NA	NA	CLSTN2	63906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	141217752	141218175	141217834	Y	ATP1B3,RASA2	RASA2	NA	NA	NA	NA	RASA2	13863	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	141230074	141230471	141230125	Y	NA	RASA2	NA	NA	NA	NA	RASA2	26185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	141610914	141611173	141610928	Y	NA	ATP1B3	NA	NA	NA	NA	ATP1B3	17948	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	141659994	141660128	141660061	Y	NA	NA	NA	NA	NA	NA	ATP1B3	67028	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	141746457	141746834	141746789	Y	NA	RP11-343B5.1	NA	NA	NA	NA	RP11-343B5.1	14206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	141758636	141758867	141758743	Y	NA	RP11-343B5.1	NA	NA	NA	NA	RP11-343B5.1	2173	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	142130035	142130079	142130067	Y	NA	XRN1	NA	NA	NA	NA	XRN1	34825	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	143853302	143853504	143853403	Y	NA	NA	NA	NA	NA	NA	C3orf58	164662	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	144134299	144134312	144134306	Y	NA	NA	NA	NA	NA	NA	C3orf58	445659	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	145785304	145785639	145785521	Y	NA	RP11-274H2.3	NA	NA	NA	NA	RP11-274H2.3	332	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	146955604	146955955	146955778	Y	NA	NA	NA	NA	NA	NA	PLSCR1	694953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	148704982	148705163	148705084	Y	NA	GYG1	HLTF,GYG1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GYG1	1965	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	148781933	148782210	148782183	Y	NA	HLTF	NA	NA	NA	NA	HLTF	20131	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	149356424	149356747	149356622	Y	NA	NA	NA	NA	NA	NA	WWTR1	95754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	149499134	149499345	149499187	Y	NA	WWTR1,COMMD2,RNF13	COMMD2	IMR90	Hi-C	24141950	RNF13	29150	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	149657313	149657850	149657694	Y	TSC22D2,RNF13	ANKUB1	NA	NA	NA	NA	ANKUB1	26322	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	149665014	149665210	149665089	Y	NA	ANKUB1	NA	NA	NA	NA	ANKUB1	18962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	149668313	149668642	149668480	Y	NA	ANKUB1	NA	NA	NA	NA	ANKUB1	15530	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	149967725	149967887	149967784	Y	NA	NA	TSC22D2,RNF13,PFN2,EIF2A,SERP1	IMR90	Hi-C	24141950	TSC22D2	156235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	150417166	150417289	150417212	Y	NA	RP11-103G8.2,FAM194A	NA	NA	NA	NA	RP11-103G8.2	2062	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	150478267	150478712	150478564	Y	TSC22D2,SERP1,SELT,GPR171,SIAH2	SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2-AS1	543	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	150990274	150990572	150990423	Y	NA	NA	NA	NA	NA	NA	MED12L	188790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	151514227	151514622	151514246	Y	NA	NA	NA	NA	NA	NA	MBNL1	444995	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	151993494	151994006	151993570	Y	NA	MBNL1,MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	8150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	152026905	152027295	152026911	Y	NA	MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	41561	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	152030036	152030551	152030147	Y	MBNL1,MBNL1	MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	44692	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	155464601	155464622	155464613	Y	NA	PLCH1	NA	NA	NA	NA	PLCH1	3745	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	158431050	158431280	158431158	Y	NA	MFSD1,RARRES1	NA	NA	NA	NA	MFSD1	16707	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	158491929	158492257	158492161	Y	NA	MFSD1,RARRES1	RARRES1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RARRES1	43444	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	159540179	159540477	159540438	Y	NA	SCHIP1	NA	NA	NA	NA	SCHIP1	15173	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	159542121	159542517	159542198	Y	NA	SCHIP1	NA	NA	NA	NA	SCHIP1	13133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	159572503	159572920	159572729	Y	NA	SCHIP1	NA	NA	NA	NA	SCHIP1	16853	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	159597816	159598076	159597925	Y	NA	SCHIP1	NA	NA	NA	NA	SCHIP1	42166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	159647586	159647883	159647684	Y	NA	NA	IQCJ-SCHIP1,IL12A,IFT80,SMC4	IMR90	Hi-C	24141950	IL12A	56654	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	160267928	160268193	160268163	Y	NA	SCARNA7,KPNA4	NA	NA	NA	NA	KPNA4	13183	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	160627332	160627671	160627502	Y	NA	NA	NA	NA	NA	NA	PPM1L	155942	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	160735129	160735256	160735193	Y	NA	NA	NA	NA	NA	NA	NMD3	85228	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	164519271	164519618	164519445	Y	NA	NA	NA	NA	NA	NA	BCHE	1033642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	165535017	165535196	165535158	Y	NA	BCHE	NA	NA	NA	NA	BCHE	18064	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	167737805	167738014	167737910	Y	NA	NA	NA	NA	NA	NA	GOLIM4	73749	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	169075984	169076327	169076322	Y	NA	NA	NA	NA	NA	NA	MECOM	303079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	169508571	169508792	169508647	Y	NA	TERC,MYNN	NA	NA	NA	NA	MYNN	19952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	170584649	170585013	170584680	Y	NA	RPL22L1,EIF5A2	NA	NA	NA	NA	RPL22L1	1259	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	171789788	171790157	171789907	Y	PLD1,FNDC3B	FNDC3B	NA	NA	NA	NA	FNDC3B	34370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	171816708	171816982	171816800	Y	NA	NA	NA	NA	NA	NA	FNDC3B	61290	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	171847438	171848726	171847798	Y	PLD1,FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	92020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	171858231	171859026	171858504	Y	PLD1,FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	102813	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	171863188	171863575	171863224	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	107770	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	171878014	171878468	171878150	Y	PLD1,FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	122596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	171948409	171948713	171948561	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	192991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	173212141	173212152	173212147	Y	NA	NA	NA	NA	NA	NA	NLGN1	100067	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	173457450	173457753	173457673	Y	NA	NA	NA	NA	NA	NA	NLGN1	345376	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	173580437	173580663	173580550	Y	NLGN1	NA	NA	NA	NA	NA	NLGN1	468363	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	173650294	173650720	173650491	Y	NA	NA	NA	NA	NA	NA	RP11-393N4.2	442314	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	173767282	173767499	173767320	Y	NA	NA	NA	NA	NA	NA	RP11-393N4.2	325535	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	174949841	174950235	174950187	Y	NA	NA	NA	NA	NA	NA	RNU4-91P	375032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	176774167	176774584	176774367	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	138677	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	176776147	176776153	176776150	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	137108	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	177076157	177076922	177076435	Y	TBL1XR1	NA	TBL1XR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	162896	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	177077500	177078084	177077832	Y	NA	NA	TBL1XR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	164239	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	177170399	177170552	177170483	Y	NA	NA	TBL1XR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	257138	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	177293593	177293900	177293627	Y	NA	NA	TBL1XR1	IMR90	Hi-C	24141950	TBL1XR1	380332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	178435674	178435882	178435779	Y	NA	NA	NA	NA	NA	NA	ZMAT3	352185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	178699167	178699475	178699434	Y	NA	NA	NA	NA	NA	NA	ZMAT3	88592	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	178978348	178978737	178978528	Y	PIK3CA,MFN1,GNB4	LRRFIP1P1	NA	NA	NA	NA	LRRFIP1P1	1287	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr3	179550123	179550276	179550202	Y	PEX5L	NA	NA	NA	NA	NA	USP13	181580	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	181367894	181368046	181367970	Y	SOX2	NA	NA	NA	NA	NA	DNAJC19	662332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	183003579	183004143	183003750	Y	ATP11B,B3GNT5,KLHL6,KLHL24	B3GNT5	NA	NA	NA	NA	B3GNT5	34547	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	184078263	184078665	184078465	Y	NA	EIF4G1,FAM131A,CLCN2,POLR2H,CHRD	NA	NA	NA	NA	POLR2H	757	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	184560038	184560430	184560098	Y	VPS8	VPS8	NA	NA	NA	NA	VPS8	32107	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	186490704	186490868	186490793	Y	ST6GAL1,TBCCD1,TBCCD1,EIF4A2	EIF4A2,RFC4	NA	NA	NA	NA	EIF4A2	8126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	186746012	186746360	186746185	Y	RTP1,ST6GAL1	NA	NA	NA	NA	NA	ST6GAL1	99738	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	186784569	186784773	186784671	Y	NA	NA	NA	NA	NA	NA	RPL39L	111923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	187459288	187459644	187459469	Y	RTP4,BCL6,BCL6,BCL6	BCL6	NA	NA	NA	NA	BCL6	1871	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	187607399	187607588	187607479	Y	BCL6	NA	BCL6,LPP	IMR90	Hi-C	24141950	BCL6	145884	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	187841029	187841328	187841153	Y	BCL6,BCL6	LPP,LPP-AS2	BCL6,LPP	IMR90	Hi-C	24141950	LPP	27744	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	187904912	187905263	187905013	Y	BCL6,BCL6	LPP,LPP-AS2	NA	NA	NA	NA	LPP-AS2	35067	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	187980692	187981197	187980748	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	110847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188017658	188018009	188017791	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	147813	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188065570	188065751	188065619	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	195725	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188103161	188103345	188103235	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	233316	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188223633	188224028	188223838	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	353788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188405130	188405536	188405435	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	535285	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188535836	188535994	188535916	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	665991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188667737	188668123	188668016	Y	NA	NA	LPP,BCL6,LPP-AS2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LPP-AS2	797892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	188816884	188817275	188817066	Y	NA	NA	BCL6	IMR90	Hi-C	24141950	LPP-AS2	947039	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	189793562	189793947	189793945	Y	LEPREL1	LEPREL1	NA	NA	NA	NA	LEPREL1	44279	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	192873675	192873788	192873739	Y	NA	NA	NA	NA	NA	NA	HRASLS	83126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	193851636	193853009	193852912	Y	ATP13A3,HES1	NA	NA	NA	NA	NA	HES1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	193858651	193858843	193858731	Y	NA	HES1	NA	NA	NA	NA	HES1	6717	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	193859199	193859624	193859359	Y	TMEM44	HES1	NA	NA	NA	NA	HES1	7265	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr3	194048965	194049014	194048990	Y	NA	NA	NA	NA	NA	NA	ATP13A3	168079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194239482	194239862	194239672	Y	NA	ATP13A3	TMEM44,ATP13A3,GP5,FLJ34208	IMR90	Hi-C	24141950	ATP13A3	22389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194247870	194248550	194248205	Y	HES1,ATP13A3	ATP13A3	ATP13A3,GP5,TMEM44,FLJ34208	IMR90	Hi-C	24141950	ATP13A3	30777	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194277383	194277706	194277514	Y	NA	TMEM44-AS1	ATP13A3,TMEM44,LRRC15,CPN2,FLJ34208,GP5	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TMEM44-AS1	25034	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194820742	194820949	194820800	Y	PPP1R2,ACAP2	NA	NA	NA	NA	NA	XXYLT1	168947	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194821602	194822296	194821841	Y	PPP1R2,ACAP2	NA	NA	NA	NA	NA	XXYLT1	167600	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194898663	194899282	194898930	Y	NA	NA	NA	NA	NA	NA	XXYLT1	90614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194909017	194909237	194909137	Y	NA	NA	NA	NA	NA	NA	XXYLT1	80659	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	194925332	194925664	194925571	Y	NA	NA	NA	NA	NA	NA	XXYLT1	64232	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr3	194973636	194973680	194973658	Y	NA	XXYLT1	NA	NA	NA	NA	XXYLT1	16216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	195258657	195259038	195258847	Y	ACAP2,TNK2,PPP1R2	PPP1R2	NA	NA	NA	NA	PPP1R2	9171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	195264699	195265107	195264994	Y	ACAP2,TNK2,PPP1R2	PPP1R2,APOD	NA	NA	NA	NA	PPP1R2	3102	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	196071529	196071904	196071800	Y	UBXN7,RNF168,LRRC33,PCYT1A,TM4SF19	TCTEX1D2	TM4SF19-TCTEX1D2	IMR90	Hi-C	24141950	TCTEX1D2	28359	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	196255741	196255873	196255820	Y	NA	RNF168,FBXO45,WDR53	UBXN7,MUC20,RNF168,C3orf43,PCYT1A,TM4SF19-TCTEX1D2,WDR53,FBXO45,CEP19	IMR90	Hi-C	24141950	RNF168	27102	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	196437709	196437842	196437776	Y	NA	CEP19,PAK2	NA	NA	NA	NA	CEP19	545	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	197190389	197190580	197190458	Y	NA	NA	DLG1,BDH1,LOC100507086,MFI2,MFI2-AS1	IMR90	Hi-C	24141950	BDH1	107614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	197264445	197264691	197264611	Y	NA	BDH1	NA	NA	NA	NA	BDH1	33503	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr3	197838995	197839386	197839068	Y	NA	NA	LMLN,ANKRD18DP	IMR90	Hi-C	24141950	LMLN	153924	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	47637	47939	47761	Y	ZNF141	ZNF595	ZNF718	IMR90	Hi-C	24141950	ZNF595	3240	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1036795	1036974	1036954	Y	CRIPAK,SLC26A1	FGFRL1	NA	NA	NA	NA	FGFRL1	35071	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1237849	1238004	1237927	Y	NA	SPON2,CTBP1,MAEA	NA	NA	NA	NA	CTBP1	3737	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1339592	1340250	1339850	Y	NA	NA	NA	NA	NA	NA	MAEA	57953	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	1710531	1710811	1710671	Y	NA	SLBP,TMEM129,TACC3	NA	NA	NA	NA	SLBP	1471	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1712467	1712893	1712787	Y	WHSC1	SLBP,TMEM129,TACC3	NA	NA	NA	NA	SLBP	185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1796551	1796852	1796752	Y	NA	FGFR3	NA	NA	NA	NA	FGFR3	3517	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1838846	1839065	1839018	Y	FGFR3,NAT8L	FGFR3,LETM1,WHSC1	NA	NA	NA	NA	LETM1	16909	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1874737	1875082	1874826	Y	WHSC1	LETM1,WHSC1	NA	NA	NA	NA	WHSC1	3586	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1875191	1875366	1875328	Y	NA	LETM1,WHSC1	NA	NA	NA	NA	WHSC1	4040	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	1966776	1967112	1967086	Y	WHSC1,WHSC1	SCARNA22	NA	NA	NA	NA	SCARNA22	7251	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	1968542	1968629	1968571	Y	WHSC1,WHSC1	SCARNA22	NA	NA	NA	NA	SCARNA22	5734	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	1970462	1970680	1970571	Y	NA	SCARNA22	NA	NA	NA	NA	SCARNA22	3683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	2355187	2355295	2355232	Y	NAT8L,ZFYVE28	NA	NA	NA	NA	NA	ZFYVE28	63095	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	2537711	2538436	2538089	Y	NA	NA	NA	NA	NA	NA	RNF4	75764	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	2538945	2539718	2539367	Y	NA	NA	NA	NA	NA	NA	RNF4	76998	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	2574508	2574529	2574516	Y	NA	NA	POLN,MXD4,LOC402160,RNF4,FAM193A,TNIP2,ADD1	IMR90	Hi-C	24141950	RNF4	112561	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	3127770	3127782	3127776	Y	RGS12,SH3BP2	NA	NA	NA	NA	NA	HTT	53362	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	3293872	3294174	3294028	Y	NA	RGS12	RGS12	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RGS12	1117	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	3357519	3357800	3357660	Y	NA	NA	NA	NA	NA	NA	RGS12	64764	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	3493312	3493795	3493528	Y	NA	LRPAP1	NA	NA	NA	NA	LRPAP1	38491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	4577048	4577566	4577357	Y	NA	STX18-AS1,STX18	NA	NA	NA	NA	STX18	34975	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	4679221	4679437	4679332	Y	NA	NA	NA	NA	NA	NA	STX18	137148	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	5640113	5640289	5640201	Y	NA	NA	NA	NA	NA	NA	EVC2	68986	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	6172675	6172972	6172793	Y	NA	JAKMIP1	NA	NA	NA	NA	JAKMIP1	27346	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	6223621	6224023	6223692	Y	PPP2R2C,PPP2R2C,MRFAP1L1,CRMP1,CRMP1,JAKMIP1	JAKMIP1,WFS1	NA	NA	NA	NA	JAKMIP1	23303	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	6565985	6566385	6566254	Y	JAKMIP1,TBC1D14,PPP2R2C,PPP2R2C	PPP2R2C,MAN2B2	NA	NA	NA	NA	PPP2R2C	2658	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	6592942	6593078	6593012	Y	NA	PPP2R2C,MAN2B2,MRFAP1	NA	NA	NA	NA	MAN2B2	18040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	6785099	6785509	6785391	Y	TBC1D14,TBC1D14,TADA2B,KIAA0232	KIAA0232	NA	NA	NA	NA	KIAA0232	3997	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	6934348	6934486	6934417	Y	NA	TBC1D14	NA	NA	NA	NA	TBC1D14	25379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	6959680	6959690	6959685	Y	NA	NA	NA	NA	NA	NA	TBC1D14	50711	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	7807485	7807548	7807490	Y	NA	NA	NA	NA	NA	NA	AFAP1	132105	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	7868592	7868926	7868734	Y	NA	NA	NA	NA	NA	NA	AFAP1	70727	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	7877911	7878253	7878055	Y	NA	NA	NA	NA	NA	NA	AFAP1	61400	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	9154755	9155069	9154900	Y	NA	FAM86KP	NA	NA	NA	NA	FAM86KP	1733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	9693091	9693174	9693121	Y	NA	NA	NA	NA	NA	NA	WDR1	423399	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	10182011	10182277	10182105	Y	WDR1	NA	WDR1,CLNK,ZNF518B	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	WDR1	65438	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	11410203	11410376	11410250	Y	HS3ST1	MIR572,RNPS1P1,HS3ST1	NA	NA	NA	NA	HS3ST1	19013	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	12642016	12642195	12642111	Y	NA	RP11-352E6.2	NA	NA	NA	NA	RP11-352E6.2	1755	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	13329661	13329866	13329822	Y	NA	NA	HSP90AB2P	IMR90	Hi-C	24141950	RAB28	154123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	13483063	13483398	13483224	Y	NA	RAB28	NA	NA	NA	NA	RAB28	591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	13484540	13485001	13484899	Y	NA	RAB28	NA	NA	NA	NA	RAB28	551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	15074859	15075210	15075035	Y	NA	NA	NA	NA	NA	NA	CPEB2	72561	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	15297006	15297030	15297019	Y	NA	NA	C1QTNF7	IMR90	Hi-C	24141950	CC2D2A	172459	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	15418390	15418789	15418765	Y	NA	NA	NA	NA	NA	NA	CC2D2A	50700	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	15422456	15422482	15422468	Y	C1QTNF7	CC2D2A	NA	NA	NA	NA	CC2D2A	47007	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	15485746	15486124	15486037	Y	CC2D2A	CC2D2A	NA	NA	NA	NA	CC2D2A	16257	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	15488697	15488958	15488934	Y	NA	CC2D2A	NA	NA	NA	NA	CC2D2A	19208	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr4	15536628	15536631	15536630	Y	NA	NA	FBXL5	IMR90	Hi-C	24141950	CC2D2A	67139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	15553738	15553982	15553851	Y	NA	NA	NA	NA	NA	NA	CC2D2A	84249	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	15590411	15590648	15590624	Y	FBXL5	NA	NA	NA	NA	NA	FAM200B	90637	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	15594702	15595080	15594956	Y	FBXL5	NA	NA	NA	NA	NA	FAM200B	86205	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	15655935	15656313	15656300	Y	FBXL5,BST1	FAM200B,FBXL5,BST1	NA	NA	NA	NA	FAM200B	24972	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	16003610	16004023	16003987	Y	NA	FGFBP2	NA	NA	NA	NA	FGFBP2	34678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	17642152	17642177	17642165	Y	CLRN2	MED28	NA	NA	NA	NA	MED28	27898	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	17829390	17829398	17829394	Y	CLRN2,NCAPG	DCAF16,NCAPG	NA	NA	NA	NA	NCAPG	18865	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	19572039	19572379	19572208	Y	NA	NA	NA	NA	NA	NA	RP11-3J1.1	115422	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	19620943	19621209	19621076	Y	NA	NA	NA	NA	NA	NA	RP11-3J1.1	164326	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	19825132	19825140	19825136	Y	NA	NA	NA	NA	NA	NA	RP11-3J1.1	368515	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	20340711	20340985	20340805	Y	NA	NA	NA	NA	NA	NA	SLIT2	87828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	20780664	20780780	20780767	Y	KCNIP4,KCNIP4	NA	NA	NA	NA	NA	PACRGL	84759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	21523815	21524208	21524014	Y	KCNIP4,KCNIP4,KCNIP4	NA	NA	NA	NA	NA	KCNIP4	424214	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	21554604	21554992	21554968	Y	NA	NA	NA	NA	NA	NA	KCNIP4	393430	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	21602576	21603408	21603328	Y	KCNIP4,KCNIP4,KCNIP4	NA	NA	NA	NA	NA	KCNIP4	345014	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	21678631	21679026	21678848	Y	NA	NA	NA	NA	NA	NA	KCNIP4	269396	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	21714034	21714408	21714405	Y	NA	NA	NA	NA	NA	NA	KCNIP4	234014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	21792715	21792997	21792947	Y	NA	NA	NA	NA	NA	NA	KCNIP4	155425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	21930853	21931229	21931116	Y	KCNIP4,KCNIP4,KCNIP4	KCNIP4	NA	NA	NA	NA	KCNIP4	17193	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	23890635	23890864	23890849	Y	NA	PPARGC1A	NA	NA	NA	NA	PPARGC1A	12848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	24079320	24079729	24079712	Y	NA	NA	PPARGC1A	IMR90	Hi-C	24141950	PPARGC1A	175608	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	25522149	25522297	25522223	Y	NA	NA	NA	NA	NA	NA	ANAPC4	145314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	26073475	26073565	26073520	Y	RBPJ,RBPJ	NA	RBPJ	IMR90	Hi-C	24141950	RBPJ	89512	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	26343884	26344230	26344058	Y	NA	NA	NA	NA	NA	NA	RBPJ	180807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	26449466	26449471	26449469	Y	NA	NA	NA	NA	NA	NA	TBC1D19	126588	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	30718904	30719447	30718947	Y	PCDH7,PCDH7	PCDH7	NA	NA	NA	NA	PCDH7	590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	30719661	30720023	30719741	Y	PCDH7,PCDH7	PCDH7	NA	NA	NA	NA	PCDH7	14	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	30954313	30954516	30954336	Y	NA	NA	NA	NA	NA	NA	PCDH7	234276	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	36314989	36315291	36315111	Y	ARAP2	NA	NA	NA	NA	NA	ARAP2	70858	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	37581972	37582372	37582240	Y	NA	NA	NA	NA	NA	NA	RELL1	103626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	38102941	38103486	38103298	Y	NA	NA	NA	NA	NA	NA	PTTG2	142885	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	38320550	38320897	38320770	Y	NA	NA	FLJ13197,KLF3,TBC1D1,TLR10	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF3	342920	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	38668617	38669179	38668850	Y	KLF3	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	4113	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	38697805	38697826	38697816	Y	NA	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	33301	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	38735219	38735515	38735398	Y	NA	NA	KLF3,TBC1D1,FLJ13197	IMR90	Hi-C	24141950	RP11-617D20.1	70715	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	39152863	39152994	39152905	Y	NA	WDR19	TLR10,FAM114A1,KLB	IMR90	Hi-C	24141950	WDR19	29030	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	39894546	39894889	39894718	Y	NA	NA	NA	NA	NA	NA	PDS5A	82687	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	39933245	39933555	39933419	Y	NA	PDS5A	NA	NA	NA	NA	PDS5A	44021	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	40200608	40201022	40200625	Y	NA	NA	NA	NA	NA	NA	N4BP2	144162	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	40910052	40910602	40910542	Y	NA	NA	NA	NA	NA	NA	NSUN7	160138	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	41162074	41162440	41162321	Y	APBB2	NA	NA	NA	NA	NA	APBB2	54291	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	41363966	41364137	41364015	Y	LIMCH1,LIMCH1	LIMCH1	NA	NA	NA	NA	LIMCH1	4342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	41365078	41365459	41365240	Y	NA	LIMCH1	NA	NA	NA	NA	LIMCH1	5454	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	41384257	41384615	41384267	Y	NA	LIMCH1	NA	NA	NA	NA	LIMCH1	24633	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	41413971	41414162	41414067	Y	NA	NA	NA	NA	NA	NA	LIMCH1	54347	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	41454099	41454301	41454195	Y	NA	NA	NA	NA	NA	NA	LIMCH1	94475	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	41469951	41470276	41469966	Y	NA	NA	NA	NA	NA	NA	LIMCH1	110327	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	41573569	41573937	41573753	Y	NA	NA	NA	NA	NA	NA	LIMCH1	213945	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	41886373	41886653	41886561	Y	PHOX2B	TMEM33	PHOX2B,LIMCH1	IMR90	Hi-C	24141950	TMEM33	48484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	42073690	42073968	42073740	Y	NA	NA	NA	NA	NA	NA	BEND4	78927	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	47327449	47327499	47327454	Y	NA	NA	NA	NA	NA	NA	COMMD8	136237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	48532180	48532355	48532269	Y	NA	SLC10A4	NA	NA	NA	NA	SLC10A4	48820	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	48840387	48840419	48840403	Y	NA	OCIAD1	NA	NA	NA	NA	OCIAD1	35158	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	48851417	48851730	48851443	Y	ZAR1,FRYL	OCIAD1	NA	NA	NA	NA	OCIAD1	46188	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	52725801	52726193	52725998	Y	NA	DCUN1D4	NA	NA	NA	NA	DCUN1D4	18635	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	52873079	52873103	52873091	Y	NA	SGCB,SPATA18	NA	NA	NA	NA	SGCB	29545	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	54172916	54173263	54173102	Y	SCFD2	NA	NA	NA	NA	NA	SCFD2	56979	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	54338842	54339193	54339023	Y	NA	NA	NA	NA	NA	NA	FIP1L1	97032	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	54929171	54929915	54929573	Y	CHIC2	CHIC2	NA	NA	NA	NA	CHIC2	314	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	55093024	55093294	55093182	Y	PDGFRA	NA	NA	NA	NA	NA	PDGFRA	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	55100480	55100923	55100634	Y	PDGFRA	PDGFRA	NA	NA	NA	NA	PDGFRA	7216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	55250871	55251023	55250942	Y	KIT	NA	KIT	IMR90	Hi-C	24141950	PDGFRA	157607	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	57313900	57314193	57314047	Y	NA	PPAT,PAICS,SRP72	NA	NA	NA	NA	PAICS	13993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	57381480	57381484	57381482	Y	ARL9	NA	NA	NA	NA	NA	SRP72	50399	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	62212497	62212753	62212605	Y	NA	NA	NA	NA	NA	NA	LPHN3	147521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	66533536	66533932	66533732	Y	EPHA5	EPHA5	NA	NA	NA	NA	RP11-807H7.1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	71638038	71638166	71638102	Y	NA	NA	NA	NA	NA	NA	GRSF1	65496	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	71677284	71677574	71677429	Y	NA	GRSF1	NA	NA	NA	NA	GRSF1	26088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	72459056	72459408	72459224	Y	NA	NA	NA	NA	NA	NA	SLC4A4	408053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	74055104	74055142	74055123	Y	ANKRD17,ALB,AFM	NA	NA	NA	NA	NA	ANKRD17	67373	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	74583240	74583435	74583319	Y	ANKRD17,CXCL3,CXCL2,IL8	IL8	MTHFD2L,CXCL3	IMR90	Hi-C	24141950	IL8	20788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	74688679	74689024	74688851	Y	MTHFD2L,CXCL3,CXCL2,IL8	NA	CXCL2,RASSF6,PF4V1,CXCL1,PPBPL2	IMR90	Hi-C	24141950	IL8	84456	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	74946881	74947010	74946944	Y	IL8,MTHFD2L,EREG,CXCL3,CXCL2	CXCL2,MTHFD2L	NA	NA	NA	NA	CXCL2	16000	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	75859868	75860329	75860092	Y	BTC,PARM1	PARM1	NA	NA	NA	NA	PARM1	3563	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	75886267	75886485	75886344	Y	PARM1	PARM1	NA	NA	NA	NA	PARM1	29962	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	75886600	75886871	75886736	Y	PARM1	PARM1	NA	NA	NA	NA	PARM1	30295	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	75945312	75945392	75945352	Y	PARM1	NA	NA	NA	NA	NA	PARM1	89007	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	76611672	76611775	76611733	Y	RCHY1	G3BP2,USO1	NA	NA	NA	NA	G3BP2	35934	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77041502	77041599	77041551	Y	NA	NUP54	NA	NA	NA	NA	NUP54	26069	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77121153	77121281	77121217	Y	NA	SCARB2,FAM47E	NA	NA	NA	NA	SCARB2	11765	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77133814	77134170	77133987	Y	NAAA,CXCL10,CXCL11	SCARB2,FAM47E	NA	NA	NA	NA	FAM47E	621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77173424	77173631	77173514	Y	ART3,CCDC158	SCARB2,FAM47E	NA	NA	NA	NA	FAM47E	40231	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77546849	77546886	77546883	Y	NA	NA	NA	NA	NA	NA	SHROOM3	192596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77928518	77929121	77928831	Y	CCNI,CCNG2	NA	NA	NA	NA	NA	SEPT11	59662	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	77931984	77932418	77932077	Y	NA	NA	NA	NA	NA	NA	CCNI	62740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	77974492	77974926	77974738	Y	CCNI	CCNI	NA	NA	NA	NA	CCNI	20232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	78711096	78711128	78711114	Y	NA	CNOT6L	NA	NA	NA	NA	CNOT6L	27641	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	79083838	79083918	79083865	Y	NA	NA	NA	NA	NA	NA	FRAS1	107114	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	79253143	79253310	79253148	Y	NA	NA	NA	NA	NA	NA	ANXA3	217363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	79859042	79859275	79859190	Y	PAQR3	PAQR3,LINC01088	NA	NA	NA	NA	PAQR3	450	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	79913129	79913325	79913227	Y	NA	LINC01088	NA	NA	NA	NA	LINC01088	22227	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	80900549	80900754	80900650	Y	NA	NA	NA	NA	NA	NA	ANTXR2	143854	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	81119203	81119473	81119338	Y	PRDM8,PRDM8	PRDM8	NA	NA	NA	NA	PRDM8	16170	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	82425681	82426156	82426003	Y	NA	NA	NA	NA	NA	NA	RASGEF1B,RP11-689K5.3	537241	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	83659208	83659576	83659392	Y	SCD5	NA	NA	NA	NA	NA	SCD5	58434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	83680712	83680815	83680808	Y	NA	SCD5	NA	NA	NA	NA	SCD5	37195	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	83681282	83681423	83681411	Y	NA	SCD5	NA	NA	NA	NA	SCD5	36587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	83912303	83912539	83912423	Y	NA	LIN54,COPS4	NA	NA	NA	NA	LIN54	19540	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	84236675	84236765	84236710	Y	THAP9,PLAC8,HELQ,AGPAT9,COQ2,HPSE,HPSE,HPSE	COQ2,HPSE	NA	NA	NA	NA	HPSE	17541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	85420434	85420908	85420714	Y	NA	NA	NA	NA	NA	NA	CDS1	81224	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	85873236	85873576	85873407	Y	NA	WDFY3-AS2,WDFY3	NA	NA	NA	NA	WDFY3-AS2	11962	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	86410493	86410688	86410582	Y	NA	ARHGAP24	NA	NA	NA	NA	ARHGAP24	16226	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	86647112	86647286	86647162	Y	NA	NA	NA	NA	NA	NA	ARHGAP24	252845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	86927841	86928538	86928361	Y	MAPK10,MAPK10,MAPK10	NA	NA	NA	NA	NA	ARHGAP24	533574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	87048261	87048368	87048363	Y	NA	NA	NA	NA	NA	NA	MAPK10	464916	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	87193959	87194066	87194010	Y	NA	NA	NA	NA	NA	NA	MAPK10	319218	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	87204498	87204708	87204603	Y	NA	NA	NA	NA	NA	NA	MAPK10	308576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	87251567	87251761	87251670	Y	NA	NA	NA	NA	NA	NA	MAPK10	261523	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	87615730	87616123	87615813	Y	PTPN13,SLC10A6	NA	NA	NA	NA	NA	PTPN13	102262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	87700627	87700837	87700672	Y	PTPN13	NA	NA	NA	NA	NA	AFF1	153317	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	88130914	88131113	88130991	Y	AFF1,HSD17B11	KLHL8	NA	NA	NA	NA	KLHL8	28353	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	88408034	88408084	88408060	Y	SPARCL1	SPARCL1	NA	NA	NA	NA	SPARCL1	42129	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	88943044	88943294	88943160	Y	NA	SPP1,RNU1-36P,PKD2	NA	NA	NA	NA	PKD2	16224	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	89202679	89202817	89202765	Y	NA	PPM1K	NA	NA	NA	NA	PPM1K	1104	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	89667506	89667617	89667562	Y	NA	NA	NA	NA	NA	NA	NAP1L5	50120	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	90211830	90212216	90212109	Y	GPRIN3	GPRIN3	NA	NA	NA	NA	GPRIN3	14945	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	90215736	90216024	90215874	Y	GPRIN3	GPRIN3	NA	NA	NA	NA	GPRIN3	11137	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	90220005	90220418	90220105	Y	GPRIN3	GPRIN3	NA	NA	NA	NA	GPRIN3	6743	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	91049597	91049943	91049669	Y	FAM190A	NA	NA	NA	NA	NA	SNCA	292131	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	91110369	91110717	91110466	Y	NA	NA	NA	NA	NA	NA	SNCA	352903	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	91238961	91239218	91239076	Y	NA	NA	NA	NA	NA	NA	SNCA	481495	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	92218724	92218762	92218742	Y	NA	NA	NA	NA	NA	NA	GRID2	1004788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	93226746	93226922	93226838	Y	GRID2	GRID2	NA	NA	NA	NA	GRID2	3196	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	95373822	95374139	95373960	Y	PDLIM5	PDLIM5	NA	NA	NA	NA	PDLIM5	2785	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	96100940	96101127	96101035	Y	BMPR1B	NA	NA	NA	NA	NA	UNC5C	367230	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	99469455	99469759	99469656	Y	NA	NA	NA	NA	NA	NA	TSPAN5	108021	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	99580316	99580421	99580372	Y	NA	TSPAN5	NA	NA	NA	NA	TSPAN5	2536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	99984592	99984944	99984751	Y	NA	ADH5	NA	NA	NA	NA	ADH5	23008	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	100861794	100861850	100861822	Y	NA	LAMTOR3,DNAJB14,RP11-15B17.1,H2AFZ	NA	NA	NA	NA	DNAJB14	4033	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	101898965	101899196	101899087	Y	NA	NA	NA	NA	NA	NA	AP001816.1	367741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	101977991	101978172	101977999	Y	NA	NA	NA	NA	NA	NA	AP001816.1	288765	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102113415	102113532	102113437	Y	NA	NA	NA	NA	NA	NA	AP001816.1	153405	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102131266	102131303	102131283	Y	NA	NA	NA	NA	NA	NA	AP001816.1	135634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102153053	102153484	102153407	Y	NA	NA	NA	NA	NA	NA	AP001816.1	113453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102173679	102174077	102173884	Y	NA	NA	NA	NA	NA	NA	AP001816.1	92860	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102200557	102200885	102200839	Y	PPP3CA	NA	NA	NA	NA	NA	AP001816.1	66052	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102237823	102238346	102238192	Y	NA	AP001816.1,PPP3CA	NA	NA	NA	NA	AP001816.1	28591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	102254740	102255090	102255043	Y	NA	AP001816.1,PPP3CA	NA	NA	NA	NA	AP001816.1	11847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	103608721	103609347	103609253	Y	NHEDC1,SLC39A8,SLC39A8,SLC39A8,SLC39A8,NFKB1,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA	NA	NA	NA	NA	NA	MANBA	70804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	103679962	103680312	103680150	Y	NHEDC1,SLC39A8,SLC39A8,SLC39A8,SLC39A8,NFKB1,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA	NA	NA	NA	NA	NA	MANBA	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	103781884	103782294	103782163	Y	MANBA	RP11-10L12.4,UBE2D3,CISD2	NA	NA	NA	NA	UBE2D3	5759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	105475042	105475179	105475125	Y	NA	NA	NA	NA	NA	NA	CXXC4	60984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	106305912	106306089	106306001	Y	NA	NA	NA	NA	NA	NA	PPA2	87149	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	106841550	106841937	106841687	Y	TBCK,LOC100507096	NPNT,INTS12	NA	NA	NA	NA	INTS12	26407	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	106846669	106847134	106846803	Y	NA	NPNT,INTS12	NA	NA	NA	NA	INTS12	31526	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	108544740	108545114	108544927	Y	SGMS2	NA	NA	NA	NA	NA	PAPSS1	94494	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	109318263	109318610	109318312	Y	NA	NA	NA	NA	NA	NA	RPL34-AS1	221006	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	110361567	110361723	110361645	Y	NA	SEC24B,SEC24B-AS1	NA	NA	NA	NA	SEC24B-AS1	8594	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	110464231	110464470	110464351	Y	NA	CCDC109B	NA	NA	NA	NA	CCDC109B	14891	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	110469853	110470280	110470027	Y	SEC24B,CCDC109B	CCDC109B	NA	NA	NA	NA	CCDC109B	9081	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	111114926	111115298	111115104	Y	GAR1,ELOVL6,ELOVL6	ELOVL6	NA	NA	NA	NA	ELOVL6	3057	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr4	111117471	111117868	111117585	Y	NA	ELOVL6	NA	NA	NA	NA	ELOVL6	487	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr4	113067380	113067784	113067656	Y	LARP7,LARP7,TIFA,AP1AR,C4orf32	C4orf32	NA	NA	NA	NA	C4orf32	2827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	113181018	113181306	113181029	Y	AP1AR,TIFA	AP1AR,ALPK1,TIFA	NA	NA	NA	NA	ALPK1	23359	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr4	113547591	113547910	113547748	Y	NA	LARP7,C4orf21	NA	NA	NA	NA	LARP7	8210	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	113956940	113957168	113957054	Y	NA	NA	NA	NA	NA	NA	ANK2	219675	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	114104327	114104616	114104364	Y	ANK2,ANK2	NA	NA	NA	NA	NA	RNU1-138P	234863	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	114355245	114355627	114355568	Y	NA	RNU1-138P	NA	NA	NA	NA	RNU1-138P	15766	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	114382932	114383313	114383209	Y	NA	RNU1-138P	NA	NA	NA	NA	RNU1-138P	43453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	114554794	114555018	114554909	Y	NA	NA	NA	NA	NA	NA	CAMK2D	126065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	114820974	114821152	114821063	Y	NA	NA	NA	NA	NA	NA	ARSJ	77731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	118953861	118954102	118953937	Y	NDST3	NDST3	NA	NA	NA	NA	NDST3	1088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	119629667	119629850	119629760	Y	NA	METTL14	NA	NA	NA	NA	METTL14	25144	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	119756174	119756657	119756269	Y	NA	SEC24D	NA	NA	NA	NA	SEC24D	1181	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	120439031	120439404	120439161	Y	PDE5A,PDE5A	NA	NA	NA	NA	NA	RP11-33B1.1	65085	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	120458820	120459280	120459019	Y	PDE5A,PDE5A,PDE5A	NA	NA	NA	NA	NA	RP11-33B1.1	84874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	120476359	120476426	120476393	Y	PDE5A	NA	NA	NA	NA	NA	PDE5A	71720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	120531384	120531610	120531497	Y	NA	PDE5A	NA	NA	NA	NA	PDE5A	16536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	121482847	121483145	121483113	Y	NA	NA	NA	NA	NA	NA	PRDM5	358880	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	121812608	121812671	121812657	Y	NA	PRDM5	NA	NA	NA	NA	PRDM5	29354	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	122606332	122606884	122606598	Y	ANXA5	ANXA5	NA	NA	NA	NA	ANXA5	9384	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	125634465	125634726	125634691	Y	NA	ANKRD50	NA	NA	NA	NA	ANKRD50	2578	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	129733811	129733921	129733891	Y	NA	NA	NA	NA	NA	NA	C4orf33	278551	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	129834414	129834678	129834574	Y	PHF17,SCLT1,C4orf33,C4orf33	NA	NA	NA	NA	NA	C4orf33	177794	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	129847015	129847068	129847042	Y	NA	NA	NA	NA	NA	NA	C4orf33	165404	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	129965980	129966229	129966106	Y	NA	C4orf33,SCLT1	NA	NA	NA	NA	C4orf33	46243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	130012970	130013118	130013063	Y	PHF17,SCLT1,C4orf33	C4orf33,SCLT1	NA	NA	NA	NA	SCLT1	206	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	134077378	134077602	134077486	Y	NA	RP11-9G1.3,PCDH10	NA	NA	NA	NA	PCDH10	8908	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	140003738	140004448	140004114	Y	CCRN4L,RAB33B,ELF2,ELF2	NA	CCRN4L	K562	ChIA-PET	22265404	CCRN4L	68795	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	140017684	140017800	140017744	Y	RAB33B,ELF2	NA	NA	NA	NA	NA	ELF2	78572	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	140096766	140097018	140096889	Y	CCRN4L,RAB33B,ELF2	ELF2	ELF2,NAA15	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ELF2	394	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	140235316	140235657	140235500	Y	ELF2,RAB33B	NAA15,NDUFC1	NA	NA	NA	NA	NDUFC1	13611	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	140321405	140321719	140321434	Y	ELF2,NAA15,RAB33B	NA	NA	NA	NA	NA	RAB33B	50667	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr4	140331152	140331480	140331316	Y	NA	RAB33B	NA	NA	NA	NA	RAB33B	40906	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	140793640	140793753	140793693	Y	MAML3	NA	NA	NA	NA	NA	MGST2	208718	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	140868265	140868315	140868290	Y	MAML3	NA	NA	NA	NA	NA	MAML3	205023	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	140967961	140968185	140967999	Y	NA	NA	NA	NA	NA	NA	MAML3	105153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	140970177	140970718	140970535	Y	NA	NA	NA	NA	NA	NA	MAML3	102620	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	140986447	140986603	140986580	Y	NA	NA	NA	NA	NA	NA	MAML3	86735	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	141016837	141017139	141016990	Y	MAML3	NA	NA	NA	NA	NA	MAML3	56199	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	141071687	141072625	141072041	Y	MAML3	MAML3	NA	NA	NA	NA	MAML3	713	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	141207513	141207988	141207940	Y	MAML3,SCOC	SCOC	NA	NA	NA	NA	SCOC	31073	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	141801657	141801765	141801711	Y	RNF150	NA	NA	NA	NA	NA	TBC1D9	126383	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	143906579	143906606	143906593	Y	NA	NA	NA	NA	NA	NA	INPP4B	139994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	144271294	144271615	144271412	Y	NA	GAB1	NA	NA	NA	NA	GAB1	15379	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	145975837	145976119	145976108	Y	NA	ABCE1,ANAPC10	NA	NA	NA	NA	ABCE1	40965	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	147379746	147379894	147379845	Y	LSM6	NA	NA	NA	NA	NA	SLC10A7	61229	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	151264145	151264674	151264371	Y	NA	NA	NA	NA	NA	NA	DCLK2	266719	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	151314417	151314500	151314459	Y	NA	NA	NA	NA	NA	NA	DCLK2	316991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	151405544	151405555	151405550	Y	NA	NA	NA	NA	NA	NA	DCLK2	408118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	151641898	151642513	151641954	Y	NA	NA	NA	NA	NA	NA	LRBA	292366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	151681778	151681989	151681952	Y	NA	NA	NA	NA	NA	NA	LRBA	252890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	152033251	152033470	152033361	Y	NA	RPS3A	NA	NA	NA	NA	RPS3A	14526	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	152047125	152047385	152047255	Y	NA	RPS3A	NA	NA	NA	NA	RPS3A	28400	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	153717992	153718074	153718038	Y	NA	TIGD4,ARFIP1	NA	NA	NA	NA	ARFIP1	18903	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	154035952	154036270	154036100	Y	KIAA0922,TIGD4	NA	KIAA0922,ARFIP1	IMR90	Hi-C	24141950	FHDC1	180448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	154170296	154170804	154170469	Y	TIGD4,KIAA0922	NA	NA	NA	NA	NA	MND1	92997	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	154408922	154409996	154409474	Y	NA	KIAA0922	NA	NA	NA	NA	KIAA0922	23424	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	154429389	154429734	154429551	Y	NA	KIAA0922	NA	NA	NA	NA	KIAA0922	43891	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	154463481	154463580	154463534	Y	NA	NA	NA	NA	NA	NA	KIAA0922	77983	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	155335642	155335663	155335653	Y	NA	NA	NA	NA	NA	NA	DCHS2	75267	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	157863056	157863372	157863345	Y	PDGFC	PDGFC	NA	NA	NA	NA	PDGFC	27174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	157889828	157890031	157889884	Y	PDGFC	PDGFC	NA	NA	NA	NA	PDGFC	515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	159101630	159101785	159101708	Y	NA	RP11-597D13.9,FAM198B	NA	NA	NA	NA	FAM198B	9160	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	159641149	159641258	159641192	Y	NA	ETFDH,C4orf46,PPID,FNIP2	NA	NA	NA	NA	PPID	1290	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	159696369	159696741	159696680	Y	PPID,RAPGEF2,FNIP2	FNIP2	NA	NA	NA	NA	FNIP2	8079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	159741404	159741764	159741424	Y	NA	NA	NA	NA	NA	NA	FNIP2	53114	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	160195976	160196239	160196029	Y	RAPGEF2	NA	NA	NA	NA	NA	FNIP2	507686	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr4	161240057	161240222	161240140	Y	NA	NA	NA	NA	NA	NA	RP11-234O6.2	1057883	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	162565757	162566134	162565946	Y	NA	NA	NA	NA	NA	NA	RP11-234O6.2	267652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	162851108	162851373	162851241	Y	NA	NA	NA	NA	NA	NA	FSTL5	231814	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	162978202	162978421	162978312	Y	FSTL5	NA	NA	NA	NA	NA	FSTL5	104766	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	164464203	164464350	164464219	Y	NPY1R,NPY5R,MARCH1	NA	NA	NA	NA	NA	NPY1R	200219	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	164471489	164471679	164471583	Y	NA	NA	NA	NA	NA	NA	NPY1R	207505	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	164688247	164688444	164688347	Y	NA	NA	NA	NA	NA	NA	NPY1R	424263	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	164876357	164876532	164876526	Y	NA	NA	NA	NA	NA	NA	NPY1R	612373	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	166360716	166361077	166360721	Y	C4orf39,CPE	NA	NA	NA	NA	NA	CPE	80370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	166966668	166966941	166966822	Y	NA	NA	NA	NA	NA	NA	TLL1	174258	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	167969514	167970188	167969851	Y	NA	NA	NA	NA	NA	NA	SPOCK3	183759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	167990376	167990675	167990526	Y	NA	NA	NA	NA	NA	NA	SPOCK3	163272	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	169718415	169718594	169718475	Y	DDX60,DDX60L	NA	NA	NA	NA	NA	CBR4	210832	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	169791118	169791499	169791286	Y	NA	NA	NA	NA	NA	NA	CBR4	137927	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	169802596	169802736	169802661	Y	PALLD	NA	NA	NA	NA	NA	CBR4	126690	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	169853850	169854103	169853858	Y	PALLD	NA	NA	NA	NA	NA	CBR4	75323	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	169991170	169991417	169991322	Y	NA	NA	SH3RF1,NEK1	IMR90	Hi-C	24141950	CBR4	61744	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	170692148	170692387	170692244	Y	NA	C4orf27	NA	NA	NA	NA	C4orf27	15044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	174337339	174338040	174337759	Y	SAP30	SAP30,SCRG1	HMGB2,GALNT7,SAP30	MCF7,K562	ChIA-PET	22265404	SCRG1	11808	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	174443232	174443552	174443433	Y	HAND2	HAND2	NA	NA	NA	NA	HAND2	5828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	174443845	174444302	174443959	Y	HAND2	HAND2	NA	NA	NA	NA	HAND2	5078	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	177011365	177011620	177011493	Y	NA	WDR17	NA	NA	NA	NA	WDR17	26380	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	183397757	183397986	183397872	Y	NA	NA	NA	NA	NA	NA	AC108142.1	333355	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	183439666	183439879	183439717	Y	NA	NA	NA	NA	NA	NA	AC108142.1	375264	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr4	183536176	183536411	183536208	Y	NA	NA	NA	NA	NA	NA	DCTD	300678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	183568083	183568352	183568218	Y	NA	NA	NA	NA	NA	NA	DCTD	268737	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	184270914	184271169	184271084	Y	NA	NA	CLDN24,CLDN22	IMR90	Hi-C	24141950	CDKN2AIP	92575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	184390171	184390713	184390483	Y	NA	CDKN2AIP,ING2	NA	NA	NA	NA	CDKN2AIP	26427	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr4	185298493	185298859	185298858	Y	NA	NA	NA	NA	NA	NA	IRF2	94875	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	185324238	185324411	185324337	Y	ACSL1,IRF2,CASP3	NA	NA	NA	NA	NA	IRF2	69323	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	185393561	185393895	185393573	Y	ACSL1,CASP3,IRF2	NA	NA	NA	NA	NA	IRF2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	185573558	185573933	185573744	Y	NA	CASP3	NA	NA	NA	NA	CASP3	4895	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	185609676	185609967	185609740	Y	NA	CASP3	NA	NA	NA	NA	CASP3	41013	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr4	186007389	186007737	186007420	Y	LRP2BP,CCDC110	NA	CASP3,SLC25A4	IMR90	Hi-C	24141950	SLC25A4	54658	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	190577773	190578241	190577957	Y	NA	NA	NA	NA	NA	NA	RNU1-51P	50627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr4	190942271	190942591	190942322	Y	NA	NA	NA	NA	NA	NA	FRG1	82328	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr5	325619	325847	325735	Y	NA	AHRR	NA	NA	NA	NA	AHRR	23328	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	333938	334337	334088	Y	NA	AHRR	NA	NA	NA	NA	AHRR	31647	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	373695	374160	373984	Y	EXOC3	NA	NA	NA	NA	NA	C5orf55	67098	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	378611	379250	378849	Y	EXOC3	NA	NA	NA	NA	NA	C5orf55	62008	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	392668	393182	392808	Y	EXOC3	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	48076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	394851	394874	394864	Y	NA	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	46384	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	399875	400445	400189	Y	EXOC3	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	40813	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr5	426647	427011	426980	Y	NA	C5orf55,EXOC3,CTD-2228K2.5	NA	NA	NA	NA	C5orf55	14247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	672861	673336	673024	Y	NA	TPPP	NA	NA	NA	NA	TPPP	18174	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr5	759096	759567	759320	Y	TPPP	NA	SLC9A3,ZDHHC11,CEP72,BRD9,TRIP13	IMR90	Hi-C	24141950	TPPP	67586	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	784651	785023	784908	Y	ZDHHC11,TPPP	NA	NA	NA	NA	NA	TPPP	93141	CAGE	JHUCS-1	hg19	FANTOM5	6.33244241357429
chr5	1022145	1022187	1022166	Y	SLC6A18,NKD2	RP11-43F13.3,NKD2	NA	NA	NA	NA	NKD2	15201	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	1041596	1043550	1041859	Y	NA	RP11-43F13.3,NKD2	NA	NA	NA	NA	NKD2	34652	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	1106623	1107163	1106965	Y	NA	SLC12A7	NA	NA	NA	NA	SLC12A7	2987	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	1485196	1485502	1485375	Y	SLC12A7,LPCAT1	LPCAT1	SLC6A3	IMR90	Hi-C	24141950	LPCAT1	36590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	1490323	1490754	1490675	Y	SLC12A7,LPCAT1	LPCAT1	NA	NA	NA	NA	LPCAT1	31338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	1506387	1506607	1506390	Y	NA	LPCAT1	SLC6A3	IMR90	Hi-C	24141950	LPCAT1	15485	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	1522529	1522699	1522639	Y	NA	LPCAT1	NA	NA	NA	NA	LPCAT1	437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	2594554	2594649	2594602	Y	NA	NA	NA	NA	NA	NA	NDUFS6	795040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	5423578	5423857	5423693	Y	KIAA0947	KIAA0947	NA	NA	NA	NA	KIAA0947	4801	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	6267686	6267805	6267746	Y	NA	NA	NA	NA	NA	NA	MED10	108902	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	6712873	6713977	6713364	Y	NA	NA	NA	NA	NA	NA	SRD5A1	81417	CAGE	JHUCS-1	hg19	FANTOM5	8.99873395613188
chr5	6927514	6927543	6927527	Y	NA	NA	NA	NA	NA	NA	SRD5A1	296058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	7397224	7397590	7397441	Y	C5orf49,ADCY2	ADCY2	NA	NA	NA	NA	ADCY2	2903	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr5	7662909	7663198	7663053	Y	ADCY2,C5orf49	NA	NA	NA	NA	NA	MTRR	186101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	7742239	7742282	7742261	Y	NA	NA	NA	NA	NA	NA	MTRR	107017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	9544480	9544834	9544772	Y	SEMA5A	SEMA5A,SNHG18	NA	NA	NA	NA	SNHG18	168	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	9681641	9681655	9681648	Y	NA	NA	TAS2R1	IMR90	Hi-C	24141950	SNHG18	137329	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	9999886	10000242	10000064	Y	NA	NA	LOC285692	IMR90	Hi-C	24141950	FAM173B	247767	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	10352620	10352938	10352732	Y	NA	CMBL,MARCH6	NA	NA	NA	NA	MARCH6	805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	10422961	10423316	10423021	Y	NA	ROPN1L	NA	NA	NA	NA	ROPN1L	16320	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	10996392	10996605	10996573	Y	NA	NA	NA	NA	NA	NA	DAP	237008	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	11125270	11125336	11125303	Y	NA	NA	NA	NA	NA	NA	DAP	365886	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	11324017	11324157	11324081	Y	NA	NA	NA	NA	NA	NA	DAP	564633	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	11328840	11329134	11329023	Y	NA	NA	NA	NA	NA	NA	DAP	569456	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	11487050	11487322	11487183	Y	NA	NA	NA	NA	NA	NA	CTNND2	414833	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	11591848	11592143	11592119	Y	CTNND2	NA	NA	NA	NA	NA	CTNND2	310012	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	14142803	14143164	14142969	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	992	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	14250238	14250405	14250312	Y	NA	NA	NA	NA	NA	NA	TRIO	108427	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	14264855	14265210	14264930	Y	TRIO	NA	NA	NA	NA	NA	TRIO	123044	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	14639692	14640047	14639871	Y	NA	EEF1A1P13,FAM105B	TRIO,FAM105A	IMR90	Hi-C	24141950	EEF1A1P13	11391	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	14673178	14673249	14673214	Y	NA	EEF1A1P13,FAM105B	NA	NA	NA	NA	FAM105B	10405	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	14809867	14810211	14810035	Y	FAM105A,FAM105B	RBBP4P1	NA	NA	NA	NA	RBBP4P1	13358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	14817188	14817452	14817373	Y	NA	RBBP4P1	NA	NA	NA	NA	RBBP4P1	20679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	15008718	15008950	15008809	Y	ANKH	NA	FAM105B,ANKH,LOC100130744	IMR90	Hi-C	24141950	ANKH	138831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	16736297	16736738	16736539	Y	NA	NA	NA	NA	NA	NA	FAM134B	121130	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	17154796	17154999	17154850	Y	BASP1	NA	NA	NA	NA	NA	AC091878.1	60157	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	17177639	17177702	17177672	Y	NA	AC091878.1	NA	NA	NA	NA	AC091878.1	37454	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	17224986	17225514	17225115	Y	BASP1	AC091878.1	NA	NA	NA	NA	AC091878.1	9830	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	17252511	17253031	17252811	Y	BASP1	AC091878.1	NA	NA	NA	NA	AC091878.1	37355	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	17282496	17282827	17282587	Y	BASP1	NA	NA	NA	NA	NA	RN7SKP133	60898	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	19735118	19735431	19735276	Y	NA	NA	NA	NA	NA	NA	CDH18	838551	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	19929233	19929395	19929314	Y	NA	NA	NA	NA	NA	NA	CDH18	644587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	21539943	21540207	21540075	Y	NA	NA	NA	NA	NA	NA	GUSBP1	200001	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	21551190	21551442	21551193	Y	NA	NA	NA	NA	NA	NA	GUSBP1	211248	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	24567114	24567132	24567123	Y	NA	RP11-116O11.1	NA	NA	NA	NA	RP11-116O11.1	14987	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	24614672	24615059	24614866	Y	NA	CDH10	NA	NA	NA	NA	CDH10	28028	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	32164142	32164348	32164245	Y	ZFR	GOLPH3	NA	NA	NA	NA	GOLPH3	8108	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	32349231	32349269	32349250	Y	NA	MTMR12	NA	NA	NA	NA	MTMR12	38116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	32366924	32367006	32366965	Y	NA	NA	NA	NA	NA	NA	MTMR12	55809	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	33442170	33442454	33442303	Y	NA	CTD-2203K17.1,TARS	NA	NA	NA	NA	TARS	3368	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	33671500	33671855	33671579	Y	NA	NA	NA	NA	NA	NA	TARS	232698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	34048471	34048803	34048799	Y	NA	AMACR	NA	NA	NA	NA	AMACR	42251	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	34715239	34715402	34715248	Y	NA	NA	NA	NA	NA	NA	RAI14	60897	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	34717862	34718081	34717968	Y	RAI14,RAI14	NA	NA	NA	NA	NA	RAI14	63520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	36119586	36119746	36119728	Y	SLC1A3,SLC1A3,C5orf33,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	LMBRD2	30317	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	36151218	36151404	36151252	Y	C5orf33,C5orf33,SKP2,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	1127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	36174356	36174616	36174412	Y	SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	24265	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr5	36277104	36277309	36277165	Y	NA	NA	NA	NA	NA	NA	SKP2	127013	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	36277859	36278299	36278119	Y	NA	NA	NA	NA	NA	NA	SKP2	127768	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	36854982	36855055	36855019	Y	NA	NIPBL	NA	NA	NA	NA	NIPBL	19806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	36898243	36898633	36898363	Y	NIPBL	NIPBL	NA	NA	NA	NA	NIPBL	23382	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	37029618	37029862	37029736	Y	NA	NA	NA	NA	NA	NA	RPS4XP6	53296	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	37209037	37209204	37209072	Y	C5orf42	C5orf42	NA	NA	NA	NA	C5orf42	38326	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	37615302	37615631	37615482	Y	NA	NA	NA	NA	NA	NA	WDR70	237988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	38660472	38660667	38660594	Y	LIFR	NA	EGFLAM,LIFR	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LIFR	54016	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	38846956	38846992	38846979	Y	OSMR,OSMR	CTD-2127H9.1,OSMR	NA	NA	NA	NA	OSMR	2996	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	39072904	39073873	39073587	Y	FYB,RICTOR	RICTOR	NA	NA	NA	NA	RICTOR	394	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	39721328	39721512	39721418	Y	NA	NA	TTC33,PTGER4	IMR90	Hi-C	24141950	DAB2	260926	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	40258590	40258730	40258690	Y	NA	NA	PTGER4,TTC33	IMR90	Hi-C	24141950	PTGER4	418870	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	40480472	40480786	40480623	Y	NA	NA	PTGER4	IMR90	Hi-C	24141950	PTGER4	196814	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	41446274	41446654	41446465	Y	NA	NA	NA	NA	NA	NA	OXCT1	421967	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	41845041	41845055	41845050	Y	OXCT1,FBXO4	OXCT1	NA	NA	NA	NA	OXCT1	23566	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	41856929	41857024	41856977	Y	NA	OXCT1,C5orf51	NA	NA	NA	NA	OXCT1	11597	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	42994649	42995346	42995172	Y	NA	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	21185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	43007637	43008177	43007831	Y	NA	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	8354	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	43009341	43009652	43009530	Y	ZNF131,C5orf39	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	6879	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	43480579	43480813	43480696	Y	NA	C5orf28,RP11-159F24.3,C5orf34	NA	NA	NA	NA	C5orf28	1182	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	44805965	44806268	44806131	Y	NA	RP11-53O19.1,MRPS30	NA	NA	NA	NA	RP11-53O19.1	611	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	45599934	45599939	45599937	Y	HCN1	NA	NA	NA	NA	NA	MRPS30	792907	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	49989954	49990143	49990051	Y	EMB,PARP8	PARP8	NA	NA	NA	NA	PARP8	30221	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	53358665	53359272	53358974	Y	NA	NA	NA	NA	NA	NA	ARL15	245140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	54433990	54434008	54434000	Y	CDC20B	GPX8,CDC20B	NA	NA	NA	NA	GPX8	19938	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	54472215	54472598	54472476	Y	NA	GPX8,CDC20B	NA	NA	NA	NA	CDC20B	5210	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	54622279	54622499	54622328	Y	NA	DHX29,SKIV2L2	NA	NA	NA	NA	SKIV2L2	20691	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	54729958	54730125	54730050	Y	SKIV2L2,DDX4	NA	NA	NA	NA	NA	RNF138P1	94404	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	55597915	55598317	55598114	Y	NA	NA	MAP3K1	IMR90	Hi-C	24141950	AC022431.1	200582	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	55756528	55756674	55756600	Y	NA	AC022431.1	MAP3K1	IMR90	Hi-C	24141950	AC022431.1	42225	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	57953324	57953469	57953397	Y	NA	NA	NA	NA	NA	NA	RAB3C	77276	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	58050203	58050468	58050292	Y	PDE4D	NA	NA	NA	NA	NA	RAB3C	174155	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	58134614	58134758	58134713	Y	NA	NA	NA	NA	NA	NA	RAB3C	258566	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58317891	58318186	58317997	Y	NA	NA	NA	NA	NA	NA	RAB3C	441843	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58358500	58358548	58358538	Y	PDE4D	NA	NA	NA	NA	NA	RAB3C	482452	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	58359884	58360252	58360059	Y	RAB3C,PDE4D,PDE4D,PDE4D	NA	NA	NA	NA	NA	RAB3C	483836	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	58395760	58396044	58395902	Y	NA	NA	NA	NA	NA	NA	RAB3C	519712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58408149	58408473	58408383	Y	NA	NA	NA	NA	NA	NA	RAB3C	532101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58418380	58418697	58418552	Y	NA	NA	NA	NA	NA	NA	RAB3C	542332	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	58422372	58422713	58422580	Y	PDE4D,PDE4D,PDE4D	NA	NA	NA	NA	NA	RAB3C	546324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58423022	58423147	58423096	Y	PDE4D,PDE4D,PDE4D	NA	NA	NA	NA	NA	RAB3C	546974	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58423311	58423752	58423511	Y	NA	NA	NA	NA	NA	NA	RAB3C	547263	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	58445128	58445519	58445324	Y	PDE4D,PDE4D	NA	NA	NA	NA	NA	RAB3C	569080	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	58508843	58508938	58508881	Y	PDE4D,PDE4D,PDE4D,PDE4D	NA	NA	NA	NA	NA	RAB3C	632795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58575824	58576193	58576112	Y	NA	NA	NA	NA	NA	NA	RAB3C	699776	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	58798066	58798450	58798258	Y	PDE4D,PDE4D,PDE4D,PDE4D	NA	NA	NA	NA	NA	RAB3C	922018	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	58816932	58817290	58817225	Y	NA	NA	NA	NA	NA	NA	RAB3C	940884	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58866470	58866828	58866806	Y	NA	NA	NA	NA	NA	NA	PART1	914712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58874550	58874813	58874554	Y	NA	NA	NA	NA	NA	NA	PART1	906727	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	58952543	58952885	58952791	Y	NA	NA	NA	NA	NA	NA	PART1	828655	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	59042319	59042506	59042428	Y	PDE4D	NA	NA	NA	NA	NA	PART1	739034	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	59057056	59057135	59057102	Y	NA	NA	NA	NA	NA	NA	PART1	724405	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	59070253	59070532	59070393	Y	PDE4D	NA	NA	NA	NA	NA	PART1	711008	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	59171284	59171310	59171298	Y	NA	NA	NA	NA	NA	NA	PART1	610230	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	59173236	59173442	59173374	Y	NA	NA	NA	NA	NA	NA	PART1	608098	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	59183388	59183889	59183871	Y	NA	NA	NA	NA	NA	NA	PART1	597651	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	59618984	59619244	59619114	Y	PDE4D	NA	NA	NA	NA	NA	PART1	162296	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	59630308	59630442	59630415	Y	NA	NA	NA	NA	NA	NA	PART1	151098	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	59735221	59735571	59735396	Y	PDE4D	PART1	NA	NA	NA	NA	PART1	45969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	59836852	59837180	59836950	Y	ELOVL7	PDE4D	NA	NA	NA	NA	PDE4D	20905	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	60600910	60601202	60601013	Y	ZSWIM6	ZSWIM6	ZSWIM6,C5orf43,NDUFAF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZSWIM6	24898	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	60626321	60626538	60626370	Y	ZSWIM6	ZSWIM6	NA	NA	NA	NA	ZSWIM6	221	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	60629701	60630027	60629731	Y	ZSWIM6	ZSWIM6	NA	NA	NA	NA	ZSWIM6	3601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	61661747	61661797	61661772	Y	NA	DIMT1,IPO11	NA	NA	NA	NA	DIMT1	35969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	61843905	61844215	61843940	Y	NA	CKS1B	NA	NA	NA	NA	CKS1B	37596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	64062074	64062237	64062149	Y	NA	SREK1IP1,CWC27	NA	NA	NA	NA	SREK1IP1	275	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	64331292	64332267	64331637	Y	NA	NA	NA	NA	NA	NA	CWC27	268535	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	64372561	64372759	64372749	Y	FAM159B	NA	CWC27,ADAMTS6	IMR90	Hi-C	24141950	CWC27	309804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	64398874	64399506	64398924	Y	NA	NA	ADAMTS6,CWC27,PPWD1,CENPK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CWC27	336117	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	64796548	64796879	64796719	Y	PPWD1,CENPK	NA	NA	NA	NA	NA	CENPK	60119	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	64809602	64809952	64809754	Y	NA	CENPK,PPWD1	NA	NA	NA	NA	CENPK	47046	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	64947553	64947709	64947631	Y	NA	CTC-534A2.2,TRIM23	NA	NA	NA	NA	TRIM23	27751	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	65015496	65015671	65015598	Y	CENPK,PPWD1,TRIM23,C5orf44,SREK1,SGTB	NLN,SGTB	NA	NA	NA	NA	NLN	352	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	66145750	66145926	66145797	Y	NA	NA	CD180	IMR90	Hi-C	24141950	MAST4	255574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	66641373	66641711	66641542	Y	NA	NA	PIK3R1	IMR90	Hi-C	24141950	MAST4	751197	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	67875476	67875860	67875665	Y	PIK3R1	NA	NA	NA	NA	NA	PIK3R1	365928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71310073	71310274	71310173	Y	MAP1B	NA	PTCD2,MRPS27	IMR90	Hi-C	24141950	MAP1B	90787	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	71404360	71404518	71404455	Y	MAP1B	MAP1B	NA	NA	NA	NA	MAP1B	3299	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71424352	71424432	71424374	Y	NA	MAP1B	NA	NA	NA	NA	MAP1B	23291	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	71462643	71462861	71462688	Y	NA	NA	NA	NA	NA	NA	MAP1B	61582	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr5	71481497	71481884	71481610	Y	MAP1B	NA	NA	NA	NA	NA	MAP1B	80436	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71505945	71506221	71506083	Y	NA	NA	NA	NA	NA	NA	MAP1B	104884	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71597463	71597663	71597590	Y	NA	PTCD2,MRPS27	NA	NA	NA	NA	PTCD2	16531	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71643596	71644131	71643868	Y	NA	PTCD2,MRPS27	NA	NA	NA	NA	MRPS27	29123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71748206	71748633	71748536	Y	NA	NA	NA	NA	NA	NA	MRPS27	133733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71804159	71804292	71804254	Y	ZNF366	NA	NA	NA	NA	NA	MRPS27	189686	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	71852712	71853181	71852905	Y	TNPO1	NA	TNPO1,ZNF366,PTCD2	IMR90	Hi-C	24141950	MRPS27	238239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	72118223	72118546	72118402	Y	TNPO1	TNPO1	NA	NA	NA	NA	TNPO1	8084	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	72607592	72607820	72607706	Y	NA	NA	FCHO2,FOXD1,TMEM171,BTF3	IMR90	Hi-C	24141950	FOXD1	134532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	72880420	72880664	72880571	Y	NA	UTP15,ANKRA2	NA	NA	NA	NA	ANKRA2	20909	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	74616844	74617109	74616992	Y	COL4A3BP,COL4A3BP	HMGCR,CTD-2235C13.2	NA	NA	NA	NA	HMGCR	13045	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	74883919	74884208	74884013	Y	NA	NA	NA	NA	NA	NA	COL4A3BP	77956	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77140620	77140840	77140736	Y	NA	TBCA	NA	NA	NA	NA	TBCA	21764	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	77147501	77147797	77147637	Y	NA	TBCA	NA	NA	NA	NA	TBCA	14807	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr5	77289736	77289928	77289813	Y	NA	NA	NA	NA	NA	NA	TBCA	127132	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77589539	77589820	77589680	Y	AP3B1	AP3B1	NA	NA	NA	NA	AP3B1	960	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77792703	77793028	77792954	Y	NA	NA	NA	NA	NA	NA	SCAMP1	138364	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	77803150	77803526	77803443	Y	AP3B1,LHFPL2,ARSB	NA	NA	NA	NA	NA	SCAMP1	148811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77807354	77807759	77807583	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	153015	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77810178	77810481	77810268	Y	AP3B1	NA	NA	NA	NA	NA	SCAMP1	155839	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77814404	77814787	77814528	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	160065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77826174	77826769	77826484	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	171835	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77890894	77891278	77891114	Y	LHFPL2	NA	NA	NA	NA	NA	LHFPL2	172566	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	77940704	77941073	77940964	Y	NA	NA	NA	NA	NA	NA	LHFPL2	122771	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	78435267	78435371	78435319	Y	NA	NA	NA	NA	NA	NA	DMGDH	94490	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	79376408	79376431	79376418	Y	THBS4	NA	NA	NA	NA	NA	THBS4	91274	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	80564528	80564843	80564784	Y	NA	CKMT2,CKMT2-AS1,ZCCHC9	NA	NA	NA	NA	CKMT2-AS1	30536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	80989989	80990372	80990282	Y	NA	NA	NA	NA	NA	NA	SSBP2	55244	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	81147637	81148063	81147790	Y	NA	CTD-2249K22.1	ATG10,SSBP2,ACOT12	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2249K22.1	2217	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	81149415	81149815	81149554	Y	NA	CTD-2249K22.1	ATG10,SSBP2,ACOT12	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2249K22.1	3995	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	82159039	82159271	82159156	Y	NA	NA	NA	NA	NA	NA	XRCC4	212046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	82768927	82769141	82769084	Y	VCAN	VCAN	NA	NA	NA	NA	VCAN	3643	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	82769254	82769739	82769524	Y	VCAN	VCAN	NA	NA	NA	NA	VCAN	3970	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	82769870	82770125	82769934	Y	TMEM167A,VCAN	VCAN	NA	NA	NA	NA	VCAN	4586	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	82770174	82770695	82770300	Y	NA	VCAN	NA	NA	NA	NA	VCAN	4890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	83677578	83677928	83677708	Y	EDIL3	EDIL3	NA	NA	NA	NA	EDIL3	683	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86275506	86275814	86275708	Y	CCNH,CCNH	NA	NA	NA	NA	NA	CTD-2161E19.1	96808	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86524222	86524964	86524759	Y	RASA1,RASA1	RASA1	MIR4280,RASA1	IMR90	Hi-C	24141950	RASA1	36741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86604017	86604207	86604034	Y	RASA1,RASA1	RASA1	NA	NA	NA	NA	RASA1	42312	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	86610420	86610785	86610768	Y	NA	RASA1	NA	NA	NA	NA	RASA1	48715	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86611168	86611502	86611258	Y	NA	RASA1	NA	NA	NA	NA	RASA1	49463	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86619148	86619498	86619336	Y	NA	NA	NA	NA	NA	NA	RASA1	57443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86619927	86620237	86620117	Y	NA	NA	NA	NA	NA	NA	RASA1	58222	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	86620547	86620785	86620574	Y	NA	NA	NA	NA	NA	NA	RASA1	58842	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	86649300	86650123	86649885	Y	NA	NA	NA	NA	NA	NA	CCNH	56713	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	86653612	86653965	86653789	Y	NA	NA	NA	NA	NA	NA	CCNH	52871	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	86663167	86663443	86663248	Y	NA	CCNH	NA	NA	NA	NA	CCNH	43393	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	86667091	86667409	86667357	Y	NA	CCNH	NA	NA	NA	NA	CCNH	39427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	87553177	87553334	87553293	Y	NA	TMEM161B-AS1,TMEM161B	NA	NA	NA	NA	TMEM161B-AS1	9378	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	87798983	87799105	87799057	Y	NA	NA	NA	NA	NA	NA	RPS3AP22	123209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	87956632	87957169	87956907	Y	MEF2C,MEF2C	CTC-467M3.1,LINC00461	NA	NA	NA	NA	CTC-467M3.1	12867	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	87967371	87967797	87967486	Y	MEF2C	CTC-467M3.1,LINC00461	NA	NA	NA	NA	CTC-467M3.1	2239	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	88031441	88031631	88031536	Y	MEF2C	LINC00461	NA	NA	NA	NA	LINC00461	46583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	88120689	88121105	88120942	Y	MEF2C	NA	NA	NA	NA	NA	MEF2C-AS1	56040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	88171082	88171456	88171409	Y	MEF2C	MEF2C-AS1,MEF2C	NA	NA	NA	NA	MEF2C-AS1	5689	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	89259292	89259660	89259475	Y	NA	NA	NA	NA	NA	NA	CETN3	443943	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	90349641	90349828	90349782	Y	ARRDC3	NA	NA	NA	NA	NA	RNU4-90P	214716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	92593669	92593984	92593827	Y	NA	NA	FLJ42709	IMR90	Hi-C	24141950	NR2F1	323059	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	92940140	92940350	92940245	Y	NR2F1	NR2F1	NA	NA	NA	NA	NR2F1	23097	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	92958001	92958327	92958133	Y	NA	NR2F1	NA	NA	NA	NA	NR2F1	40958	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	93256507	93256894	93256879	Y	NA	NA	NA	NA	NA	NA	FAM172A	188510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	93304446	93304744	93304683	Y	NA	NA	NA	NA	NA	NA	FAM172A	140660	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	95094861	95094991	95094889	Y	NA	RHOBTB3	GLRX	IMR90	Hi-C	24141950	RHOBTB3	47635	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	95113820	95114121	95113969	Y	NA	GLRX	NA	NA	NA	NA	GLRX	42588	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	95295681	95296335	95296056	Y	ELL2	NA	NA	NA	NA	NA	ELL2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	95845653	95846023	95845804	Y	NA	CAST	NA	NA	NA	NA	CAST	12948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	98175322	98175662	98175493	Y	NA	NA	NA	NA	NA	NA	RGMB-AS1	68149	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	98253335	98253735	98253703	Y	CHD1	CTD-2007H13.3	NA	NA	NA	NA	CTD-2007H13.3	9140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	99382569	99383254	99382906	Y	NA	NA	NA	NA	NA	NA	CTD-2001C12.1	485712	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	99386410	99387139	99386777	Y	NA	NA	NA	NA	NA	NA	CTD-2001C12.1	481827	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	100163819	100164102	100163976	Y	ST8SIA4,ST8SIA4	NA	NA	NA	NA	NA	ST8SIA4	72868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	100177018	100177251	100177133	Y	ST8SIA4,ST8SIA4	NA	NA	NA	NA	NA	ST8SIA4	59719	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	102121468	102121525	102121497	Y	PPIP5K2	PAM	NA	NA	NA	NA	PAM	33783	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	102304978	102305194	102305031	Y	NA	NA	NA	NA	NA	NA	PPIP5K2	148659	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	105752390	105752961	105752697	Y	NA	NA	NA	NA	NA	NA	EFNA5	1251635	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	106803068	106803432	106803267	Y	NA	NA	NA	NA	NA	NA	EFNA5	201164	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	106805205	106805528	106805416	Y	NA	NA	NA	NA	NA	NA	EFNA5	199068	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	106878561	106878904	106878854	Y	EFNA5	NA	NA	NA	NA	NA	EFNA5	125692	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	106900103	106900354	106900202	Y	NA	NA	NA	NA	NA	NA	EFNA5	104242	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	106967635	106967784	106967710	Y	NA	EFNA5	NA	NA	NA	NA	EFNA5	36812	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	107004755	107005118	107004922	Y	NA	EFNA5	NA	NA	NA	NA	EFNA5	159	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	108391550	108391948	108391605	Y	NA	NA	NA	NA	NA	NA	FER	310027	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	108749269	108749562	108749418	Y	NA	PJA2	NA	NA	NA	NA	PJA2	5574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	109784078	109784096	109784087	Y	NA	NA	NA	NA	NA	NA	SLC25A46	287741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	110561753	110562145	110561768	Y	CAMK4	AC010468.1,CAMK4	NA	NA	NA	NA	CAMK4	4402	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	110790342	110790723	110790533	Y	NA	NA	NA	NA	NA	NA	STARD4	55565	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	110797509	110797845	110797534	Y	NA	STARD4	NA	NA	NA	NA	STARD4	48443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	110846985	110847356	110847238	Y	WDR36,STARD4	STARD4	NA	NA	NA	NA	STARD4	697	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	111018976	111019194	111019085	Y	C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	NA	NA	NA	NA	NA	STARD4	172688	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	111054290	111054596	111054444	Y	C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	NA	NA	NA	NA	NA	STARD4	208002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	111502817	111502914	111502867	Y	C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,EPB41L4A	EPB41L4A-AS1	NA	NA	NA	NA	EPB41L4A-AS1	8594	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	112054250	112054372	112054293	Y	NA	APC	NA	NA	NA	NA	APC	13055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	112218687	112219263	112218745	Y	APC	SRP19,REEP5	NA	NA	NA	NA	SRP19	23768	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	112219334	112219897	112219506	Y	NA	SRP19,REEP5	NA	NA	NA	NA	SRP19	24415	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	112628840	112629057	112628905	Y	MCC,MCC	NA	NA	NA	NA	NA	MCC	193470	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	112857514	112857856	112857617	Y	NA	MCC,YTHDC2	NA	NA	NA	NA	YTHDC2	10134	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	114726097	114726311	114726134	Y	NA	NA	NA	NA	NA	NA	CCDC112	95569	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	114755701	114755980	114755870	Y	PGGT1B,TICAM2,FEM1C	NA	FEM1C,TMED7-TICAM2	IMR90	Hi-C	24141950	FEM1C	122611	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	114847596	114847935	114847760	Y	NA	FEM1C	NA	NA	NA	NA	FEM1C	30656	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	114848957	114849251	114849109	Y	NA	FEM1C	NA	NA	NA	NA	FEM1C	29340	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	114913600	114913827	114913746	Y	NA	FEM1C,AC010226.4,TMED7-TICAM2,TICAM2	NA	NA	NA	NA	AC010226.4	21927	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	114959651	114959879	114959766	Y	COMMD10	AC010226.4,TMED7	NA	NA	NA	NA	TMED7-TICAM2,TICAM2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	115236990	115237113	115237051	Y	NA	NA	NA	NA	NA	NA	ATG12	61435	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	115412236	115412448	115412328	Y	NA	CTD-2287O16.1,COMMD10	NA	NA	NA	NA	COMMD10	6240	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	115420076	115420175	115420113	Y	LOC644100	CTD-2287O16.1,COMMD10	NA	NA	NA	NA	COMMD10	1388	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	115794810	115794877	115794844	Y	COMMD10,SEMA6A	NA	NA	NA	NA	NA	CTB-118N6.1	101381	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	115908516	115909016	115908646	Y	SEMA6A	CTB-118N6.1	NA	NA	NA	NA	SEMA6A	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	118453384	118453586	118453485	Y	NA	NA	NA	NA	NA	NA	DMXL1	81917	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	118626064	118626362	118626186	Y	DMXL1,TNFAIP8	TNFAIP8	NA	NA	NA	NA	TNFAIP8	23677	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	118667521	118667660	118667595	Y	DMXL1,TNFAIP8,TNFAIP8	NA	NA	NA	NA	NA	TNFAIP8	65134	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	118747776	118748171	118748023	Y	NA	HSD17B4	NA	NA	NA	NA	HSD17B4	37967	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	118836565	118836574	118836570	Y	NA	NA	NA	NA	NA	NA	HSD17B4	50427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	119373192	119373536	119373352	Y	NA	NA	NA	NA	NA	NA	PRR16	424437	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	119476137	119476646	119476408	Y	NA	NA	NA	NA	NA	NA	PRR16	321327	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	119573403	119573585	119573488	Y	NA	NA	NA	NA	NA	NA	PRR16	224388	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	119848516	119848911	119848640	Y	NA	NA	NA	NA	NA	NA	PRR16	50543	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	122177778	122177931	122177816	Y	NA	SNX24	NA	NA	NA	NA	SNX24	644	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	122322384	122322589	122322416	Y	NA	PPIC	NA	NA	NA	NA	PPIC	47847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	122885327	122885717	122885442	Y	CEP120,CSNK1G3	CSNK1G3	NA	NA	NA	NA	CSNK1G3	39534	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	123987356	123987539	123987440	Y	ZNF608	NA	NA	NA	NA	NA	ZNF608	94961	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	123997171	123997561	123997207	Y	ZNF608	NA	NA	NA	NA	NA	ZNF608	84939	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	124077955	124078154	124078062	Y	ZNF608	ZNF608	NA	NA	NA	NA	ZNF608	4346	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	124085012	124085124	124085092	Y	NA	ZNF608	ZNF608	IMR90	Hi-C	24141950	ZNF608	2512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	124178131	124178310	124178211	Y	NA	RP11-436H11.1	NA	NA	NA	NA	RP11-436H11.1	35205	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	124911723	124911866	124911795	Y	NA	NA	NA	NA	NA	NA	RP11-436H11.1	768797	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	126094157	126094598	126094339	Y	LMNB1,LMNB1	LMNB1	LMNB1	K562,MCF7	ChIA-PET	22265404	LMNB1	15717	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	126149471	126149945	126149720	Y	NA	LMNB1	NA	NA	NA	NA	LMNB1	39156	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	126308404	126308764	126308593	Y	NA	NA	NA	NA	NA	NA	MARCH3	55736	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	126847905	126848122	126848004	Y	NA	PRRC1	PRRC1	K562,MCF7	ChIA-PET	22265404	PRRC1	3179	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	127421091	127421133	127421112	Y	NA	SLC12A2	NA	NA	NA	NA	SLC12A2	3633	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	127849179	127849476	127849294	Y	NA	SLC27A6	NA	NA	NA	NA	SLC27A6	22230	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	128432436	128432693	128432508	Y	SLC27A6,SLC27A6,ISOC1	ISOC1	NA	NA	NA	NA	ISOC1	3992	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	129020678	129020929	129020798	Y	ADAMTS19	NA	NA	NA	NA	NA	CHSY3	217236	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	130711215	130711396	130711236	Y	NA	NA	NA	NA	NA	NA	CDC42SE2	132029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	130739357	130739526	130739407	Y	NA	NA	NA	NA	NA	NA	CDC42SE2	160171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	130976279	130976499	130976398	Y	FNIP1,CDC42SE2,RAPGEF6	RAPGEF6	NA	NA	NA	NA	RAPGEF6	7350	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	131074214	131074509	131074363	Y	NA	NA	NA	NA	NA	NA	FNIP1	56201	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	131108111	131108375	131108174	Y	NA	FNIP1	NA	NA	NA	NA	FNIP1	22335	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	131560740	131561286	131561173	Y	IL3,CSF2,PDLIM4,P4HA2,P4HA2	PDLIM4	NA	NA	NA	NA	PDLIM4	30078	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	131601385	131601782	131601639	Y	P4HA2	PDLIM4,SLC22A4,P4HA2	NA	NA	NA	NA	PDLIM4	10021	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	131629178	131629624	131629352	Y	FNIP1,IRF1,SLC22A4	PDLIM4,SLC22A4,P4HA2	NA	NA	NA	NA	P4HA2	170	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr5	131832561	131832909	131832704	Y	AFF4,SLC22A4,IRF1	IRF1	IRF1	IMR90	Hi-C	24141950	IRF1	8071	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	132323487	132323535	132323508	Y	NA	AFF4,AC010240.3,ZCCHC10	NA	NA	NA	NA	AC010240.3	1685	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	132581339	132581487	132581431	Y	ANKRD43	NA	NA	NA	NA	NA	HSPA4	195685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	133290184	133290209	133290197	Y	NA	C5orf15,VDAC1	NA	NA	NA	NA	C5orf15	12269	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	133456495	133456816	133456660	Y	UBE2B,PHF15,CDKL3,TCF7,TCF7	TCF7	NA	NA	NA	NA	TCF7	8093	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	133540709	133541017	133540863	Y	NA	SKP1,MIR3661,PPP2CA	NA	NA	NA	NA	MIR3661	18431	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	133681629	133682059	133681927	Y	NA	CDKL3,UBE2B	NA	NA	NA	NA	CDKL3	22679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	133801466	133801754	133801589	Y	NA	NA	PHF15,SKP1,CDKN2AIPNL,UBE2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CDKN2AIPNL	55877	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	133802349	133802592	133802584	Y	PPP2CA,SEC24A,UBE2B	NA	PHF15,SKP1,CDKN2AIPNL,UBE2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CDKN2AIPNL	56760	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	134259128	134259903	134259220	Y	NA	PCBD2,CTB-36O1.7,MTND6P4,MTND5P11,MTND4P12,MIR4461	NA	NA	NA	NA	MTND5P11	246	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr5	134261311	134262635	134261858	Y	NA	PCBD2,CTB-36O1.7,MTND6P4,MTND5P11	NA	NA	NA	NA	MTND4P12,MIR4461	0	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	134727973	134728292	134728105	Y	H2AFY	H2AFY	NA	NA	NA	NA	H2AFY	5312	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	134729736	134729896	134729816	Y	NA	H2AFY	NA	NA	NA	NA	H2AFY	3708	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	135547897	135548364	135548088	Y	NA	NA	NA	NA	NA	NA	SMAD5	81363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	136640603	136640888	136640744	Y	NA	NA	NA	NA	NA	NA	SPOCK1	291180	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	136900041	136900222	136900186	Y	NA	SPOCK1	TRPC7	IMR90	Hi-C	24141950	SPOCK1	31846	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	137370531	137370718	137370637	Y	PKD2L2,KDM3B,FAM53C,FAM53C,FAM13B,NME5	FAM13B	PKD2L2	IMR90	Hi-C	24141950	FAM13B	14932	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	137785775	137785891	137785836	Y	WNT8A,NME5,LRRTM2,REEP2	REEP2,EGR1	NA	NA	NA	NA	REEP2	13069	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	137799770	137800154	137799916	Y	FAM13B,FAM53C,KDM3B,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	591	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	137800317	137800564	137800421	Y	FAM13B,FAM53C,KDM3B,ETF1,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	1138	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr5	137827710	137828119	137827817	Y	EGR1	EGR1,ETF1	NA	NA	NA	NA	EGR1	28531	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	137870529	137870619	137870574	Y	FAM53C,KDM3B,ETF1	ETF1,HSPA9	NA	NA	NA	NA	ETF1	6370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	137881069	137881276	137881109	Y	WNT8A,FAM53C,ETF1	ETF1,HSPA9	NA	NA	NA	NA	ETF1	4080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	137908044	137908328	137908223	Y	NA	ETF1,HSPA9,CTNNA1	NA	NA	NA	NA	HSPA9	805	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	138248139	138248403	138248239	Y	NA	LRRTM2	NA	NA	NA	NA	LRRTM2	39082	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	138290386	138290689	138290535	Y	NA	NA	NA	NA	NA	NA	LRRTM2	81329	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	138440633	138440869	138440757	Y	LRRTM2,MATR3,MATR3,DNAJC18	NA	NA	NA	NA	NA	MATR3	166572	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	138686401	138686737	138686569	Y	NA	PAIP2	NA	NA	NA	NA	PAIP2	11125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	138897527	138897822	138897662	Y	MATR3,MATR3,DNAJC18,PSD2	TMEM173,UBE2D2	DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	UBE2D2	6194	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	138965572	138965797	138965632	Y	NA	NA	NA	NA	NA	NA	CXXC5	59087	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr5	139017086	139017541	139017145	Y	CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	7343	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139017934	139018665	139018227	Y	MZB1,CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	6219	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139022530	139022885	139022670	Y	NA	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	1999	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139023017	139023340	139023136	Y	NA	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	1544	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139031397	139032095	139031636	Y	C5orf53,PSD2,NRG2,CXXC5	CXXC5	NA	NA	NA	NA	CXXC5	6513	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139049454	139050310	139049802	Y	MATR3,MZB1,CXXC5	CXXC5	NA	NA	NA	NA	CXXC5	24570	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139090940	139091124	139091019	Y	NA	NA	CXXC5	K562	ChIA-PET	22265404	CXXC5	66056	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139167686	139167904	139167758	Y	NA	PSD2	CXXC5,UBE2D2,DNAJC18,NRG2,PSD2,CYSTM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PSD2	5502	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139636160	139636260	139636251	Y	SRA1	PFDN1	NA	NA	NA	NA	PFDN1	44446	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	139638984	139639383	139639269	Y	C5orf32,ZMAT2,SRA1,IK,HARS2,APBB3,ANKHD1	PFDN1	NA	NA	NA	NA	PFDN1	41323	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139652898	139653497	139653234	Y	SRA1,SLC35A4,HBEGF,CD14,CD14,APBB3,ANKHD1	PFDN1	NA	NA	NA	NA	PFDN1	27209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139782360	139782578	139782471	Y	NA	CTC-329D1.3,RNU4-14P,ANKHD1,ANKHD1-EIF4EBP3	NA	NA	NA	NA	ANKHD1-EIF4EBP3	2867	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139933633	139933898	139933723	Y	ANKHD1,ZMAT2,IK,HARS2,CD14,CD14,SRA1,APBB3	EIF4EBP3,SRA1,SLC35A4,APBB3	NA	NA	NA	NA	SRA1	1997	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	139975060	139975424	139975289	Y	HBEGF,ANKHD1,ZMAT2,IK,CD14,CD14,SRA1,APBB3	EIF4EBP3,SRA1,SLC35A4,APBB3,TMCO6,IK,NDUFA2	SRA1,APBB3,HARS,SLC35A4	IMR90	Hi-C	24141950	APBB3	3723	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	140090601	140091006	140090806	Y	NA	WDR55,HARS2,HARS,ZMAT2,VTRNA1-3	NA	NA	NA	NA	VTRNA1-3	12737	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	140381128	140381335	140381222	Y	NA	PCDHAC2	NA	NA	NA	NA	PCDHAC2	37308	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	140381838	140382244	140382041	Y	DND1,PCDHAC1,PCDHAC2,PCDHAC2	PCDHAC2	NA	NA	NA	NA	PCDHAC2	38018	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	140875639	140876085	140875835	Y	PCDHB16,TAF7,RELL2,DIAPH1	PCDHGC3,PCDHGC5	NA	NA	NA	NA	PCDHGC5	8831	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	140888509	140888855	140888756	Y	PCDH12,PCDHGA11,PCDHGA12	PCDHGC3,PCDHGC5	NA	NA	NA	NA	PCDHGC5	21701	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	140893513	140893891	140893828	Y	PCDH12,KIAA0141,DIAPH1	PCDHGC3,PCDHGC5	NA	NA	NA	NA	PCDHGC5	26705	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	140910138	140910894	140910494	Y	NA	PCDHGC5	NA	NA	NA	NA	PCDHGC5	43330	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	140983787	140984197	140984031	Y	PCDH12,KIAA0141,ARAP3,DIAPH1	DIAPH1,HDAC3,RELL2,FCHSD1	NA	NA	NA	NA	DIAPH1	12425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	141151294	141151412	141151353	Y	NA	NA	LOC729080,KIAA0141	IMR90	Hi-C	24141950	ARAP3	91506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	141187107	141187320	141187214	Y	PCDHGC3	NA	KIAA0141,PCDH12,RNF14,PCDH1,LOC729080	IMR90	Hi-C	24141950	PCDH1	69491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	141256552	141256862	141256814	Y	PCDHGA9,PCDHGB6,PCDHGC4,PCDHGC5,RELL2,NDFIP1,PCDH1	KIAA0141	NA	NA	NA	NA	PCDH1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	141684732	141684818	141684775	Y	PCDH1,SPRY4	AC005592.2,SPRY4	NA	NA	NA	NA	AC005592.2	18040	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	141824245	141824298	141824272	Y	NA	NA	NDFIP1,SPRY4,FGF1	IMR90	Hi-C	24141950	SPRY4	120225	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	141992944	141993173	141993092	Y	FGF1,FGF1	NA	NA	NA	NA	NA	ARHGAP26	154776	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	142541504	142541934	142541585	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	RPL7P21	168236	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	144549099	144549238	144549211	Y	NA	NA	NA	NA	NA	NA	PRELID2	663694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	145094622	145094634	145094628	Y	GRXCR2	NA	KCTD16	IMR90	Hi-C	24141950	PRELID2	118298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	145498086	145498488	145498483	Y	NA	NA	NA	NA	NA	NA	LARS	61735	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	145499175	145499563	145499369	Y	NA	NA	NA	NA	NA	NA	LARS	60660	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	146751772	146751865	146751838	Y	NA	NA	NA	NA	NA	NA	DPYSL3	135754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	146832241	146832308	146832261	Y	JAKMIP2,DPYSL3	NA	NA	NA	NA	NA	DPYSL3	55311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	146890135	146890280	146890247	Y	NA	DPYSL3	NA	NA	NA	NA	DPYSL3	2516	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	147024840	147025034	147024978	Y	DPYSL3,JAKMIP2	NA	NA	NA	NA	NA	JAKMIP2	135304	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	147160341	147160727	147160571	Y	NA	JAKMIP2	NA	NA	NA	NA	JAKMIP2	3	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	148777144	148777405	148777275	Y	NA	PCYOX1L,MIR143HG,MIR143,MIR145	IL17B,MIR143HG,CSNK1A1,ARHGEF37	IMR90	Hi-C	24141950	MIR143HG	6847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	149110836	149111455	149111198	Y	ARHGEF37,SLC26A2,CDX1,PPARGC1B	PPARGC1B	NA	NA	NA	NA	PPARGC1B	2975	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	149111581	149111664	149111645	Y	NA	PPARGC1B	NA	NA	NA	NA	PPARGC1B	3720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	149379132	149379170	149379142	Y	NA	SLC26A2,HMGXB3,TIGD6	NA	NA	NA	NA	TIGD6	402	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	149518246	149518623	149518550	Y	NA	PDGFRB	NA	NA	NA	NA	PDGFRB	14812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	149668238	149668366	149668283	Y	SYNPO,SLC6A7,CAMK2A	ARSI	NA	NA	NA	NA	ARSI	48504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	149921548	149921861	149921663	Y	NA	NA	NA	NA	NA	NA	SYNPO	56781	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	149979570	149980059	149979818	Y	NA	SYNPO	NA	NA	NA	NA	SYNPO	928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	150086779	150087134	150086956	Y	RBM22,DCTN4,DCTN4	RBM22,DCTN4	MYOZ3,RBM22	IMR90	Hi-C	24141950	RBM22	8110	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	150267218	150267533	150267276	Y	IRGM	ZNF300	NA	NA	NA	NA	ZNF300	15012	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	150474739	150475397	150475230	Y	RBM22,DCTN4,DCTN4,C5orf62,TNIP1,SLC36A1,CCDC69	TNIP1	NA	NA	NA	NA	TNIP1	3601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	151213355	151213633	151213423	Y	NA	NA	NA	NA	NA	NA	ATOX1	63262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	152022104	152022437	152022374	Y	NA	NA	NA	NA	NA	NA	GLRA1	719701	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	153569046	153569266	153569156	Y	NA	GALNT10	NA	NA	NA	NA	GALNT10	756	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	153903267	153903411	153903357	Y	HAND1	NA	NA	NA	NA	NA	SAP30L	79750	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	153939934	153940118	153940082	Y	NA	NA	FAM114A2,MFAP3,SAP30L	IMR90	Hi-C	24141950	SAP30L	116417	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	154205315	154205569	154205444	Y	KIF4B,GEMIN5	CNOT8	NA	NA	NA	NA	CNOT8	29544	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	154871450	154872048	154871744	Y	KIF4B	NA	NA	NA	NA	NA	SGCD	423306	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr5	155107244	155107656	155107286	Y	NA	NA	PPP1R2P3,TIMD4,SGCD	IMR90	Hi-C	24141950	SGCD	187698	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr5	156718541	156718931	156718583	Y	HAVCR2,ADAM19,CYFIP2,CYFIP2,CYFIP2	CYFIP2	NA	NA	NA	NA	CYFIP2	27452	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	156913799	156914134	156913967	Y	NA	NA	NA	NA	NA	NA	ADAM19	86649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	157023315	157023779	157023637	Y	HAVCR2,NIPAL4,ADAM19	ADAM19	CYFIP2,FNDC9,NIPAL4,ADAM19,SOX30,C5orf52,THG1L,LSM11	IMR90	Hi-C	24141950	ADAM19	22532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158136422	158136652	158136537	Y	NA	NA	NA	NA	NA	NA	EBF1	388117	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158154303	158154569	158154437	Y	NA	NA	NA	NA	NA	NA	EBF1	370200	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158201990	158201999	158201995	Y	NA	NA	NA	NA	NA	NA	EBF1	322770	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr5	158234948	158235431	158235135	Y	RNF145,RNF145,RNF145	NA	NA	NA	NA	NA	EBF1	289338	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158245937	158246321	158246106	Y	NA	NA	NA	NA	NA	NA	EBF1	278448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158248563	158248909	158248669	Y	EBF1	NA	NA	NA	NA	NA	EBF1	275860	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158303194	158303489	158303342	Y	NA	NA	NA	NA	NA	NA	EBF1	221280	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158364876	158365080	158364964	Y	NA	NA	NA	NA	NA	NA	EBF1	159689	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	158448175	158448456	158448348	Y	RNF145,RNF145,RNF145,RNF145,RNF145,IL12B	NA	NA	NA	NA	NA	EBF1	76313	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	158471730	158472045	158472013	Y	NA	NA	NA	NA	NA	NA	EBF1	52724	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158489129	158489509	158489418	Y	NA	EBF1,RP11-175K6.1	NA	NA	NA	NA	EBF1	35260	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	158507046	158507207	158507202	Y	NA	EBF1,RP11-175K6.1	NA	NA	NA	NA	EBF1	17562	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	158521683	158522288	158522053	Y	EBF1	EBF1,RP11-175K6.1	NA	NA	NA	NA	EBF1	2481	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr5	158605991	158606398	158606265	Y	NA	RNF145	NA	NA	NA	NA	RNF145	28663	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	158611896	158612266	158612182	Y	IL12B,RNF145,RNF145,RNF145,RNF145,RNF145	RNF145	NA	NA	NA	NA	RNF145	22795	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	158829827	158830139	158829983	Y	IL12B	NA	ADRA1B	IMR90	Hi-C	24141950	UBLCP1	141738	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	159414162	159414427	159414404	Y	NA	TTC1	NA	NA	NA	NA	TTC1	19693	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	159451021	159451194	159451125	Y	NA	TTC1	NA	NA	NA	NA	TTC1	16901	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	159480874	159481257	159481243	Y	NA	TTC1	NA	NA	NA	NA	TTC1	46754	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	159496389	159496537	159496463	Y	NA	PWWP2A	NA	NA	NA	NA	PWWP2A	47893	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	159533500	159533764	159533742	Y	NA	PWWP2A	NA	NA	NA	NA	PWWP2A	10666	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	159815159	159815328	159815245	Y	NA	CCNJL,C1QTNF2,C5orf54,SLU7,PTTG1	NA	NA	NA	NA	C5orf54	9776	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	161709354	161709556	161709455	Y	NA	NA	NA	NA	NA	NA	GABRG2	216808	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	164189701	164189961	164189831	Y	NA	NA	NA	NA	NA	NA	MAT2B	1261581	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	167197574	167197786	167197665	Y	NA	NA	NA	NA	NA	NA	WWC1	518870	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	168055373	168055394	168055384	Y	NA	CTC-575D19.1	NA	NA	NA	NA	CTC-575D19.1	14056	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	169998509	169998839	169998651	Y	NA	NA	NA	NA	NA	NA	KCNMB1	183828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	170378492	170378604	170378547	Y	RANBP17	NA	NA	NA	NA	NA	RANBP17	91618	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	170552523	170552751	170552637	Y	NA	NA	NA	NA	NA	NA	TLX3	181537	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	170906599	170906797	170906698	Y	NA	NA	NA	NA	NA	NA	NPM1	94479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	171431879	171432256	171432181	Y	UBTD2,STK10	FBXW11	NA	NA	NA	NA	FBXW11	2	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	171432610	171432692	171432660	Y	NA	FBXW11	NA	NA	NA	NA	FBXW11	733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	171834226	171834319	171834273	Y	NA	SH3PXD2B	NA	NA	NA	NA	SH3PXD2B	45208	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	171882832	171882998	171882915	Y	SH3PXD2B	SH3PXD2B	NA	NA	NA	NA	SH3PXD2B	3305	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	172127867	172128162	172128023	Y	NEURL1B	CTB-79E8.3	NA	NA	NA	NA	CTB-79E8.3	46151	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	172192263	172193766	172192583	Y	UBTD2,ERGIC1,C5orf41,DUSP1	DUSP1	NA	NA	NA	NA	DUSP1	2432	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	172313877	172314602	172314167	Y	DUSP1,C5orf41	NA	NA	NA	NA	NA	ERGIC1	54599	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	172451248	172451363	172451250	Y	NA	ATP6V0E1	NA	NA	NA	NA	ATP6V0E1	42488	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	172710965	172711353	172711102	Y	NA	STC2	ATP6V0E1,BNIP1,LOC285593,NKX2-5,NEURL1B,RPL26L1,STC2,C5orf41	IMR90	Hi-C	24141950	STC2	43153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	173199242	173199802	173199475	Y	CPEB4	NA	CPEB4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CPEB4	113481	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	173346462	173346760	173346662	Y	NA	CPEB4	NA	NA	NA	NA	CPEB4	33179	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	173572937	173573111	173573024	Y	HMP19	NA	HMP19	IMR90	Hi-C	24141950	CPEB4	259654	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr5	173738914	173739193	173739170	Y	HMP19	NA	BOD1	IMR90	Hi-C	24141950	MSX2	410343	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	173957114	173957459	173957290	Y	NA	NA	MSX2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MSX2	192077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	175180862	175181137	175181000	Y	NA	CPLX2	CPLX2,LOC643201	IMR90	Hi-C	24141950	CPLX2	40176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	176187940	176187958	176187949	Y	NA	UNC5A	CDHR2,UNC5A,HK3	IMR90	Hi-C	24141950	UNC5A	47520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	176337374	176337559	176337468	Y	NA	NA	NA	NA	NA	NA	UNC5A	101896	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	176421508	176421945	176421807	Y	UIMC1,UIMC1,UIMC1,RAB24,GRK6,HK3	UIMC1,ZNF346	NA	NA	NA	NA	UIMC1	25689	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	176526460	176526848	176526554	Y	FGFR4,FGFR4	FGFR4,NSD1	NA	NA	NA	NA	FGFR4	14573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	177042588	177043196	177042926	Y	NSD1,FAM193B	TMED9,B4GALT7	NA	NA	NA	NA	B4GALT7	17487	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	177373047	177373130	177373089	Y	PROP1	RP11-1252I4.2	NA	NA	NA	NA	RP11-1252I4.2	8424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	177541057	177541427	177541157	Y	N4BP3	N4BP3,RMND5B,NHP2	NA	NA	NA	NA	N4BP3	2613	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	177645267	177645446	177645363	Y	N4BP3,CLK4,AGXT2L2	HNRNPAB	NA	NA	NA	NA	HNRNPAB	15759	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	177645477	177646261	177645593	Y	NA	HNRNPAB	NA	NA	NA	NA	HNRNPAB	15969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	177647239	177647603	177647383	Y	CLK4,AGXT2L2	HNRNPAB	NA	NA	NA	NA	HNRNPAB	17731	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	178052813	178053238	178053128	Y	AGXT2L2,CLK4	CLK4	COL23A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CLK4	2378	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	178323440	178323622	178323554	Y	NA	ZNF354B,RNU1-39P,ZFP2	NA	NA	NA	NA	ZFP2	2545	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	178326649	178327118	178326669	Y	NA	ZNF354B,RNU1-39P,ZFP2	NA	NA	NA	NA	ZFP2	5754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	178692524	178692976	178692825	Y	ADAMTS2	NA	NA	NA	NA	NA	ADAMTS2	77455	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179038504	179038699	179038602	Y	NA	HNRNPH1	NA	NA	NA	NA	HNRNPH1	21086	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179398044	179398477	179398178	Y	RUFY1,HNRNPH1,MAML1,SQSTM1,RNF130	NA	NA	NA	NA	NA	TBC1D9B	65185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179399876	179400065	179399971	Y	RNF130,RASGEF1C	NA	NA	NA	NA	NA	TBC1D9B	67017	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179434619	179435010	179434852	Y	NA	NA	NA	NA	NA	NA	RNF130	62108	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179453285	179453637	179453562	Y	RUFY1,HNRNPH1,MAML1,SQSTM1,RNF130	RNF130	NA	NA	NA	NA	RNF130	43481	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179461499	179461900	179461782	Y	RUFY1,HNRNPH1,MAML1,SQSTM1,RNF130	RNF130	NA	NA	NA	NA	RNF130	35218	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	179465387	179465429	179465409	Y	MAML1,MGAT4B,RNF130	RNF130	NA	NA	NA	NA	RNF130	31689	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	179496400	179496705	179496553	Y	NA	RNF130	NA	NA	NA	NA	RNF130	413	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179512347	179512479	179512439	Y	MAML1,LTC4S	RNF130	NA	NA	NA	NA	RNF130	15229	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179575752	179576029	179575891	Y	NA	NA	NA	NA	NA	NA	RASGEF1C	58124	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	179718006	179718384	179718320	Y	NA	MAPK9	NA	NA	NA	NA	MAPK9	907	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr5	179967202	179967410	179967248	Y	NA	CNOT6	NA	NA	NA	NA	CNOT6	47790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	180473265	180473624	180473271	Y	BTNL9	NA	NA	NA	NA	NA	CTC-338M12.5	143300	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr5	180611137	180611357	180611292	Y	MGAT1	CTC-338M12.5,TRIM7,TRIM41,MIR4638	NA	NA	NA	NA	CTC-338M12.5	5567	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	180633694	180634117	180633980	Y	NA	CTC-338M12.5,TRIM7,TRIM41,MIR4638,SNORD96A,CTC-338M12.4,GNB2L1	NA	NA	NA	NA	TRIM7	3401	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr5	180634441	180634803	180634658	Y	NA	CTC-338M12.5,TRIM7,TRIM41,MIR4638,SNORD96A,CTC-338M12.4,GNB2L1	NA	NA	NA	NA	TRIM7	4148	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	440153	440531	440212	Y	NA	NA	IRF4	IMR90	Hi-C	24141950	DUSP22	150523	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	472688	472701	472695	Y	HUS1B,EXOC2	NA	NA	NA	NA	NA	DUSP22	183058	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	542839	543066	543064	Y	NA	NA	NA	NA	NA	NA	EXOC2	148051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	1609094	1609758	1609395	Y	FOXC1	FOXC1	NA	NA	NA	NA	FOXC1	413	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	2299603	2299973	2299788	Y	NA	NA	NA	NA	NA	NA	GMDS-AS1	55621	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	2429511	2429720	2429615	Y	NA	NA	NA	NA	NA	NA	GMDS-AS1	185529	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	2767771	2767941	2767856	Y	NA	WRNIP1	NA	NA	NA	NA	WRNIP1	4123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	3069574	3070273	3069674	Y	NA	RIPK1,BPHL	LOC100507194,WRNIP1	K562	ChIA-PET	22265404	RIPK1	7349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	3248062	3248427	3248198	Y	SLC22A23,TUBB2A,TUBB2B	PSMG4,TUBB2B	TUBB2A,BPHL,RIPK1,LOC100507194,TUBB2B	IMR90	Hi-C	24141950	TUBB2B	18098	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	3259939	3260435	3260206	Y	NA	PSMG4,TUBB2B	NA	NA	NA	NA	TUBB2B	29975	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	3426515	3426916	3426721	Y	NA	SLC22A23	NA	NA	NA	NA	SLC22A23	28340	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	3511713	3512018	3511866	Y	NA	NA	PXDC1,SLC22A23	IMR90	Hi-C	24141950	SLC22A23	56457	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	3876469	3876663	3876636	Y	NA	NA	PXDC1,FAM50B	IMR90	Hi-C	24141950	PXDC1	126209	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	4728304	4728573	4728482	Y	NA	CDYL	NA	NA	NA	NA	CDYL	23911	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	4990656	4990905	4990781	Y	NA	RPP40	NA	NA	NA	NA	RPP40	11392	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	5157743	5158129	5157936	Y	NA	NA	NA	NA	NA	NA	LYRM4	101043	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	5190782	5191184	5190977	Y	NA	NA	NA	NA	NA	NA	LYRM4	67988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	5996432	5996750	5996575	Y	NA	NRN1	NA	NA	NA	NA	NRN1	8450	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	5997075	5997523	5997169	Y	NRN1	NRN1	NA	NA	NA	NA	NRN1	7677	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	6000594	6000986	6000896	Y	NRN1	NRN1	NA	NA	NA	NA	NRN1	4214	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	6008887	6009261	6009138	Y	NRN1	NRN1	NA	NA	NA	NA	NRN1	3687	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	6151506	6151793	6151650	Y	F13A1	NA	NA	NA	NA	NA	NRN1	146306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	6928196	6928339	6928298	Y	RREB1,RREB1	NA	NA	NA	NA	NA	RREB1	177491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	7137966	7138068	7138020	Y	RIOK1,RIOK1,CAGE1,RREB1,RREB1	RREB1	NA	NA	NA	NA	RREB1	32136	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	7143191	7143555	7143322	Y	NA	RREB1	NA	NA	NA	NA	RREB1	37361	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	7157997	7158379	7158000	Y	NA	NA	NA	NA	NA	NA	RREB1	52167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	7261407	7261720	7261663	Y	NA	NA	NA	NA	NA	NA	RP11-69L16.5	76081	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	7392474	7392879	7392481	Y	NA	SSR1,RIOK1	NA	NA	NA	NA	RIOK1	4745	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	7731119	7731407	7731310	Y	TXNDC5,TXNDC5,BMP6	BMP6	NA	NA	NA	NA	BMP6	6089	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	10383571	10383981	10383824	Y	TFAP2A,TFAP2A	TFAP2A	NA	NA	NA	NA	TFAP2A	33911	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	10825104	10825395	10825250	Y	ELOVL2	MAK	NA	NA	NA	NA	MAK	11369	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	11259827	11260072	11259953	Y	TMEM170B,MAK,NEDD9	NA	NA	NA	NA	NA	NEDD9	120509	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	11270585	11270869	11270602	Y	TMEM170B,MAK,NEDD9	NA	NA	NA	NA	NA	NEDD9	109712	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	12757628	12757881	12757647	Y	PHACTR1	NA	NA	NA	NA	NA	RPL15P3	245286	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	12771306	12771602	12771454	Y	NA	NA	NA	NA	NA	NA	RPL15P3	258964	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	13373745	13373768	13373757	Y	NA	TBC1D7	NA	NA	NA	NA	TBC1D7	46930	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	13391107	13391478	13391293	Y	NA	NA	NA	NA	NA	NA	TBC1D7	64292	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	13409891	13410259	13410206	Y	NA	NA	NA	NA	NA	NA	GFOD1	75635	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	13455271	13455432	13455317	Y	NA	GFOD1	NA	NA	NA	NA	GFOD1	30462	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	13602068	13602103	13602086	Y	NA	SIRT5,NOL7	NA	NA	NA	NA	NOL7	11456	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	13649579	13649948	13649702	Y	NA	NOL7	NA	NA	NA	NA	NOL7	36020	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	13671877	13672171	13672102	Y	TBC1D7,GFOD1,GFOD1,CD83	RANBP9	NOL7,SIRT5	K562	ChIA-PET	22265404	RANBP9	37625	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	14075513	14075713	14075634	Y	RANBP9,CD83	CD83	DTNBP1,RNF182	IMR90	Hi-C	24141950	CD83	40159	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	14211061	14211714	14211398	Y	CD83	NA	JARID2,DTNBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CD83	95189	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	15436683	15436898	15436793	Y	JARID2	NA	NA	NA	NA	NA	JARID2-AS1	189818	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	15485085	15485275	15485180	Y	NA	NA	NA	NA	NA	NA	DTNBP1	176014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	15541251	15541598	15541282	Y	NA	NA	NA	NA	NA	NA	DTNBP1	119691	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	15542142	15542162	15542152	Y	JARID2	NA	NA	NA	NA	NA	DTNBP1	119127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	15616123	15616332	15616207	Y	JARID2	DTNBP1	NA	NA	NA	NA	DTNBP1	44957	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16319874	16320274	16319989	Y	MYLIP	NA	NA	NA	NA	NA	GMPR	83063	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16320322	16320626	16320375	Y	NA	NA	NA	NA	NA	NA	GMPR	83511	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16422379	16422759	16422608	Y	NA	NA	NA	NA	NA	NA	GMPR	185568	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16439523	16439703	16439580	Y	MYLIP,ATXN1	NA	NA	NA	NA	NA	GMPR	202712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16488193	16488587	16488526	Y	MYLIP	NA	NA	NA	NA	NA	GMPR	251382	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16495109	16495178	16495163	Y	NA	NA	NA	NA	NA	NA	GMPR	258298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16607418	16607798	16607611	Y	NA	NA	NA	NA	NA	NA	ATXN1	151924	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	16652450	16652671	16652543	Y	NA	NA	NA	NA	NA	NA	ATXN1	107051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	16747394	16747788	16747685	Y	NA	ATXN1	NA	NA	NA	NA	ATXN1	11934	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	17614611	17614952	17614695	Y	KIF13A,NUP153,FAM8A1	FAM8A1	NA	NA	NA	NA	FAM8A1	16025	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	17703484	17703614	17703560	Y	KDM1B,FAM8A1,NUP153	NUP153	NA	NA	NA	NA	NUP153	1042	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	18436625	18436893	18436744	Y	KDM1B,RNF144B	NA	NA	NA	NA	NA	DEK	173571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	20498349	20498567	20498410	Y	MBOAT1	CDKAL1	NA	NA	NA	NA	CDKAL1	34121	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	21098770	21098791	21098780	Y	NA	NA	NA	NA	NA	NA	SOX4	493181	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr6	21141154	21141340	21141254	Y	NA	NA	NA	NA	NA	NA	SOX4	450632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	21587723	21589288	21589205	Y	SOX4	SOX4	LINC00340,CDKAL1	MCF7	ChIA-PET	22265404	SOX4	2684	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr6	21589338	21589711	21589681	Y	SOX4	SOX4	LINC00340,CDKAL1	MCF7	ChIA-PET	22265404	SOX4	2261	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	21765300	21765398	21765349	Y	NA	NA	NA	NA	NA	NA	SOX4	173328	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	21808482	21808727	21808539	Y	NA	NA	NA	NA	NA	NA	SOX4	216510	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	22026062	22026222	22026161	Y	NA	NA	NA	NA	NA	NA	SOX4	434090	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	24834309	24834321	24834317	Y	NA	NA	NA	NA	NA	NA	GMNN	61150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	24926891	24927058	24926968	Y	TDP2	PPIAP29	FAM65B	IMR90	Hi-C	24141950	PPIAP29	47589	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	25352378	25352572	25352400	Y	NA	NA	NA	NA	NA	NA	LRRC16A	75072	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	25511627	25511972	25511799	Y	NA	NA	NA	NA	NA	NA	SCGN	138492	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	25525007	25525226	25525060	Y	NA	NA	NA	NA	NA	NA	SCGN	125238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	25992254	25993073	25992840	Y	NA	TRIM38,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB	NA	NA	NA	NA	HIST1H3A	25645	CAGE	JHUCS-1	hg19	FANTOM5	4.66601019947579
chr6	26521003	26521206	26521108	Y	HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD,HIST1H1D,BTN3A2,BTN3A2,BTN2A2,BTN2A2,BTN2A2,BTN3A1,BTN3A3,BTN2A1,BTN2A1,ABT1	HMGN4	NA	NA	NA	NA	HMGN4	15427	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	26533222	26533398	26533310	Y	NA	HMGN4	NA	NA	NA	NA	HMGN4	3235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	26537641	26538043	26537718	Y	NA	HMGN4	NA	NA	NA	NA	HMGN4	1008	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	26550694	26551000	26550826	Y	NA	HMGN4,ABT1	NA	NA	NA	NA	HMGN4	14061	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	27145729	27146130	27146023	Y	ZNF184	HIST1H2BJ,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,RP11-209A2.1	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-209A2.1	30893	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	27300679	27301026	27300902	Y	NA	ZNF204P,ZNF391	NA	NA	NA	NA	ZNF204P	36278	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	27416333	27416557	27416445	Y	NA	ZNF184	NA	NA	NA	NA	ZNF184	22340	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	27655687	27656083	27655918	Y	NA	NA	LOC100507173	MCF7,K562	ChIA-PET	22265404	HIST1H2AI	117816	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	27745629	27745723	27745700	Y	NA	HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H4J	NA	NA	NA	NA	HIST1H2AI	28176	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	27862895	27863061	27863012	Y	ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,ZKSCAN4,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO	HIST1H2AL,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO	NA	NA	NA	NA	HIST1H2BO	3692	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	28072476	28072872	28072543	Y	HIST1H4K,HIST1H2AK,ZNF165,ZSCAN16,ZNF192	ZSCAN16	NA	NA	NA	NA	ZSCAN16	17466	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	28101066	28101269	28101177	Y	OR2B2,ZNF187,ZKSCAN4,ZSCAN16	ZSCAN16	NA	NA	NA	NA	ZSCAN16	10728	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	28102608	28102781	28102677	Y	ZSCAN16	ZSCAN16	NA	NA	NA	NA	ZSCAN16	12270	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	28565127	28565440	28565259	Y	NA	SCAND3	SCAND3	MCF7	ChIA-PET	22265404	SCAND3	16549	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	28885422	28885544	28885424	Y	NA	HCG14,TRIM27	NA	NA	NA	NA	TRIM27	4222	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	29949488	29949840	29949664	Y	NA	HLA-A	NA	NA	NA	NA	HLA-A	42451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	30069810	30070038	30069951	Y	HLA-E,ABCF1,HLA-F,LOC554223,HLA-G,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,RNF39,RNF39	ZNRD1,ZNRD1-AS1,PPP1R11	NA	NA	NA	NA	PPP1R11	37324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	30177609	30178061	30177863	Y	NA	TRIM26,HLA-L	NA	NA	NA	NA	TRIM26	1143	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	30247447	30247451	30247450	Y	NA	HLA-L,TRIM39,HCG18	NA	NA	NA	NA	HLA-L	22086	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	30254050	30254472	30254356	Y	NA	HLA-L,TRIM39,HCG18	NA	NA	NA	NA	HLA-L	28689	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	30276337	30276699	30276532	Y	ATAT1,ATAT1	TRIM39,HCG18,RPP21	NA	NA	NA	NA	TRIM39	15557	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	30453844	30454132	30453996	Y	ZNRD1,TUBB	RANP1,HLA-E	HLA-E	MCF7,K562	ChIA-PET	22265404	HLA-E	1112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	30703511	30703691	30703651	Y	NA	PPP1R18,NRM,MDC1,TUBB,FLOT1,IER3	NA	NA	NA	NA	FLOT1	4819	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	31705604	31706142	31705906	Y	HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,PBX2,NEU1,HSPA1L,HSPA1B,HSPA1A,GPSM3,ATF6B,AGPAT1,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1	ABHD16A,LY6G6D,DDAH2,CLIC1,VWA7	NA	NA	NA	NA	MSH5	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	31761868	31762215	31762042	Y	LY6G5C	VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48	NA	NA	NA	NA	VARS	138	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	31789672	31790268	31789876	Y	NA	VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48,NEU1	NA	NA	NA	NA	HSPA1B	3244	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr6	32072186	32072277	32072232	Y	C2,TNXB	TNXB,ATF6B,FKBPL,PPT2,PRRT1	NA	NA	NA	NA	TNXB	8834	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	32075999	32076179	32076125	Y	LY6G6C,TNXB,RNF5,EGFL8,TNXB	TNXB,ATF6B,FKBPL,PPT2,PRRT1	NA	NA	NA	NA	TNXB	4932	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	32081652	32082042	32081917	Y	NA	TNXB,ATF6B,FKBPL,PPT2,PRRT1,EGFL8	NA	NA	NA	NA	TNXB	541	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	32789030	32789171	32789101	Y	HSD17B8,PSMB8	TAP2,TAPSAR1,PSMB9,PSMB8,TAP1	NA	NA	NA	NA	TAP2	15386	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	32819276	32819643	32819486	Y	HLA-DRA,HLA-DRB5,TAPBP,RGL2,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,B3GALT4,TAP2,PSMB8,PSMB8,TAP1,PSMB9	TAP2,TAPSAR1,PSMB9,PSMB8,TAP1	NA	NA	NA	NA	TAP1	112	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	33129390	33129479	33129402	Y	NA	SLC39A7,RXRB,HSD17B8,RING1	NA	NA	NA	NA	SLC39A7	36743	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	33159164	33159383	33159309	Y	NA	SLC39A7,RXRB,HSD17B8,RING1	NA	NA	NA	NA	SLC39A7	6839	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	33386765	33387072	33386901	Y	HLA-DMB,HLA-DMA,BRD2,HLA-DPA1,HLA-DPB1	KIFC1,PHF1,CUTA,SYNGAP1,ZBTB9	NA	NA	NA	NA	SYNGAP1	918	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	33392796	33393285	33393082	Y	SYNGAP1	KIFC1,PHF1,CUTA,SYNGAP1,ZBTB9	NA	NA	NA	NA	SYNGAP1	6949	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	33396313	33396709	33396628	Y	SYNGAP1	KIFC1,PHF1,CUTA,SYNGAP1,ZBTB9	NA	NA	NA	NA	SYNGAP1	10466	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	33538378	33538887	33538702	Y	LEMD2,LEMD2,RPS18,B3GALT4,TAPBP,PHF1	BAK1,ITPR3	NA	NA	NA	NA	BAK1	7132	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	33538911	33539356	33539169	Y	LEMD2,LEMD2,HLA-DPB1,RXRB,RPS18,B3GALT4,TAPBP,PHF1	BAK1,ITPR3	NA	NA	NA	NA	BAK1	6663	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	34110371	34110716	34110594	Y	PACSIN1,GRM4	NA	NA	NA	NA	NA	CYCSP55	74500	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	34191726	34192136	34191830	Y	C6orf1,HMGA1	CYCSP55,HMGA1,C6orf1,RPL35P2	RPS10-NUDT3,NUDT3,C6orf1	MCF7	ChIA-PET	22265404	CYCSP55	6510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	34358644	34359014	34358829	Y	NA	NUDT3,RPS10	NA	NA	NA	NA	NUDT3	193	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	35016451	35016706	35016532	Y	NA	NA	NA	NA	NA	NA	ANKS1A	161409	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	35170056	35170397	35170225	Y	NA	SCUBE3	TCP11,ANKS1A,ZNF76,SCUBE3	IMR90	Hi-C	24141950	SCUBE3	9793	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	35171617	35171779	35171698	Y	NA	SCUBE3	TCP11,ANKS1A,ZNF76,SCUBE3,UHRF1BP1	IMR90	Hi-C	24141950	SCUBE3	8411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	35561770	35562146	35562007	Y	NA	RP3-340B19.2	NA	NA	NA	NA	RP3-340B19.2	40120	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	35569141	35569999	35569809	Y	FKBP5,SLC26A8,SLC26A8,SLC26A8,MAPK14,FKBP5,FKBP5,ZNF76,DEF6	RP3-340B19.2	NA	NA	NA	NA	RP3-340B19.2	47491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	35632268	35633036	35633003	Y	NA	NA	NA	NA	NA	NA	FKBP5	61324	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	35875551	35875739	35875654	Y	SLC26A8,SLC26A8,SLC26A8,MAPK14,MAPK13,BRPF3,SRPK1	SRPK1	NA	NA	NA	NA	SRPK1	11380	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	36391024	36391283	36391227	Y	SRSF3,CDKN1A,CDKN1A,PXT1	KCTD20,PXT1	NA	NA	NA	NA	KCTD20	17261	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	36409257	36409482	36409373	Y	MAPK14,BRPF3,STK38,SRSF3,CDKN1A,CDKN1A,ETV7,ETV7,PXT1,KCTD20	KCTD20,PXT1	NA	NA	NA	NA	PXT1	591	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	36761501	36761809	36761749	Y	NA	CPNE5	NA	NA	NA	NA	CPNE5	43969	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr6	36786044	36786391	36786334	Y	NA	CPNE5	NA	NA	NA	NA	CPNE5	19387	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	36802429	36803020	36802653	Y	PI16,CPNE5	CPNE5,C6orf89,PPIL1	NA	NA	NA	NA	CPNE5	2758	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	36812029	36812445	36812409	Y	NA	CPNE5,C6orf89,PPIL1	NA	NA	NA	NA	CPNE5	6251	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	37001116	37001406	37001162	Y	NA	MTCH1	NA	NA	NA	NA	MTCH1	49042	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	37070053	37070857	37070460	Y	CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2	NA	PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	65122	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	37271813	37272101	37271931	Y	PIM1,TBC1D22B	TBC1D22B,TMEM217,RNF8	NA	NA	NA	NA	RNF8	47647	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	37464858	37465170	37465019	Y	NA	CCDC167	NA	NA	NA	NA	CCDC167	528	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	37470188	37470996	37470682	Y	NA	CCDC167	CCDC167,FTSJD2,MDGA1,RNF8,MIR4462,BTBD9	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CCDC167	4490	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	37529793	37530180	37530041	Y	NA	NA	CCDC167,TBC1D22B,RNF8,FTSJD2,MIR4462,MDGA1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CCDC167	64095	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	37673124	37673343	37673226	Y	NA	MDGA1	MDGA1	K562	ChIA-PET	22265404	MDGA1	8042	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	37673638	37673745	37673684	Y	NA	MDGA1	MDGA1	K562	ChIA-PET	22265404	MDGA1	8556	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	37751286	37751497	37751341	Y	NA	ZFAND3	BTBD9,ZFAND3,FTSJD2,CCDC167,MDGA1	IMR90	Hi-C	24141950	ZFAND3	33778	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	37892657	37892863	37892737	Y	NA	NA	NA	NA	NA	NA	ZFAND3	107382	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	38447266	38447403	38447335	Y	DNAH8,BTBD9,BTBD9	NA	NA	NA	NA	NA	BTBD9	158521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	38605801	38606040	38606032	Y	NA	NA	NA	NA	NA	NA	BTBD9	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	39850347	39850811	39850571	Y	NA	MOCS1	NA	NA	NA	NA	MOCS1	49479	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	39886697	39886822	39886760	Y	NA	MOCS1,RP1-278E11.3	NA	NA	NA	NA	MOCS1	13468	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	41246560	41247024	41246830	Y	NFYA,TFEB,TREML2,TREML4,TREM1	NA	NA	NA	NA	NA	NFYA	207876	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	41528607	41528881	41528714	Y	TAF8,CCND3,NFYA,TFEB	FOXP4,RP11-328M4.2	NA	NA	NA	NA	RP11-328M4.2	14248	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	41906927	41907077	41907010	Y	CCND3	USP49,MED20,BYSL	NA	NA	NA	NA	BYSL	20001	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42219475	42219699	42219588	Y	NA	MRPS10	NA	NA	NA	NA	MRPS10	35872	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42228452	42228568	42228527	Y	NA	MRPS10	NA	NA	NA	NA	MRPS10	44849	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42259187	42259201	42259195	Y	NA	NA	NA	NA	NA	NA	MRPS10	75584	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42283170	42283354	42283262	Y	NA	NA	NA	NA	NA	NA	MRPS10	99567	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42348376	42348588	42348501	Y	TRERF1	NA	NA	NA	NA	NA	TRERF1	69201	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42369897	42370202	42370080	Y	NA	TRERF1	NA	NA	NA	NA	TRERF1	47587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42409399	42409623	42409499	Y	NA	TRERF1	NA	NA	NA	NA	TRERF1	8166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42413186	42413554	42413522	Y	NA	TRERF1	GUCA1B,MRPS10	IMR90	Hi-C	24141950	TRERF1	4235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42420719	42421067	42420926	Y	NA	TRERF1	NA	NA	NA	NA	TRERF1	2930	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	42515407	42515543	42515467	Y	NA	UBR2	TRERF1,GUCA1A,TAF8,GUCA1B,CCND3,C6orf132,MRPS10,UBR2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UBR2	14257	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	43001164	43001472	43001318	Y	NA	MEA1,KLHDC3,RRP36,KLC4,CUL7,MRPL2,PTK7	NA	NA	NA	NA	KLC4	5043	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	43073020	43073202	43073194	Y	NA	MRPL2,PTK7	NA	NA	NA	NA	PTK7	31014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	43351423	43351855	43351784	Y	NA	ZNF318,ABCC10	TJAP1,TTBK1,DLK2,POLH,SLC22A7,ABCC10,C6orf108,CUL9,YIPF3,LRRC73,POLR1C,CRIP3,ZNF318,XPO5	IMR90	Hi-C	24141950	ZNF318	16207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	43878497	43878687	43878563	Y	GTPBP2,MRPS18A	NA	NA	NA	NA	NA	VEGFA	142576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	43894411	43894725	43894584	Y	NFKBIE,TJAP1,GTPBP2,MAD2L1BP	NA	NA	NA	NA	NA	VEGFA	158490	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	44011946	44012485	44012109	Y	NA	NA	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	TMEM63B	80166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44020614	44020967	44020695	Y	NFKBIE	NA	RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223	IMR90	Hi-C	24141950	TMEM63B	71684	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44024667	44024914	44024806	Y	SLC35B2	NA	RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TMEM63B	67737	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44070488	44070804	44070651	Y	NA	TMEM63B,MRPL14	NA	NA	NA	NA	TMEM63B	21847	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	44096308	44096658	44096594	Y	NA	TMEM63B,MRPL14	NA	NA	NA	NA	MRPL14	3114	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44205272	44205504	44205346	Y	NFKBIE	SLC29A1,HSP90AB1,MIR4647,SLC35B2,NFKBIE,TMEM151B	NA	NA	NA	NA	HSP90AB1	7320	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44205807	44206020	44205896	Y	NA	SLC29A1,HSP90AB1,MIR4647,SLC35B2,NFKBIE,TMEM151B	NA	NA	NA	NA	HSP90AB1	6804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44230828	44231731	44231363	Y	NFKBIE	SLC29A1,HSP90AB1,MIR4647,SLC35B2,TMEM151B,AARS2	NA	NA	NA	NA	NFKBIE	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	44887030	44887214	44887174	Y	NA	NA	NA	NA	NA	NA	SUPT3H	456476	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	44893195	44893513	44893382	Y	NA	NA	NA	NA	NA	NA	SUPT3H	450177	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	45313959	45314320	45314140	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	29370	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	45317803	45318343	45317888	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	25347	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	45322073	45322342	45322124	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	21348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	45392235	45392572	45392528	Y	RUNX2	SUPT3H	NA	NA	NA	NA	SUPT3H	48545	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	45409618	45409900	45409810	Y	NA	NA	NA	NA	NA	NA	SUPT3H	65928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	47102503	47102708	47102571	Y	NA	NA	TNFRSF21	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFRSF21	172933	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	47121097	47121235	47121166	Y	NA	NA	TNFRSF21	IMR90	Hi-C	24141950	TNFRSF21	154406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	48967422	48967791	48967607	Y	MUT	NA	NA	NA	NA	NA	MUT	461113	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	51275260	51275721	51275608	Y	NA	RP3-437C15.1	NA	NA	NA	NA	RP3-437C15.1	1925	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	52259035	52259232	52259147	Y	NA	PAQR8,EFHC1	NA	NA	NA	NA	EFHC1	23874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	52261634	52261809	52261784	Y	EFHC1	PAQR8,EFHC1	NA	NA	NA	NA	EFHC1	21297	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	52383934	52384018	52383972	Y	NA	NA	NA	NA	NA	NA	TRAM2	55695	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	53224045	53224723	53224315	Y	NA	ELOVL5	ELOVL5	K562	ChIA-PET	22265404	ELOVL5	12098	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	53678166	53678361	53678262	Y	NA	LRRC1	NA	NA	NA	NA	LRRC1	20871	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	55228034	55228050	55228042	Y	HMGCLL1,GFRAL	NA	NA	NA	NA	NA	COL21A1	1028842	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	56811664	56812033	56811848	Y	NA	BEND6	BEND6,KIAA1586,ZNF451,PRIM2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	BEND6	5740	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	57322945	57323108	57323027	Y	NA	NA	NA	NA	NA	NA	PRIM2	145342	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	57389697	57390070	57389732	Y	NA	NA	NA	NA	NA	NA	PRIM2	212094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	57454700	57454967	57454896	Y	NA	NA	NA	NA	NA	NA	PRIM2	277097	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	58776280	58777091	58777029	Y	NA	NA	NA	NA	NA	NA	GUSBP4	521711	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	58777244	58778438	58777771	Y	NA	NA	NA	NA	NA	NA	GUSBP4	522675	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	58778631	58779245	58778717	Y	NA	NA	NA	NA	NA	NA	GUSBP4	524062	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	62308410	62308765	62308588	Y	NA	NA	NA	NA	NA	NA	KHDRBS2	685367	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	64398084	64398491	64398303	Y	PHF3	NA	NA	NA	NA	NA	PHF3	54359	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69353902	69354407	69354113	Y	NA	BAI3	NA	NA	NA	NA	BAI3	10643	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69390302	69390390	69390344	Y	NA	BAI3	NA	NA	NA	NA	BAI3	47043	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69431654	69431887	69431658	Y	NA	NA	NA	NA	NA	NA	BAI3	88395	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69471294	69471734	69471424	Y	BAI3	NA	NA	NA	NA	NA	BAI3	128035	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr6	69543385	69543644	69543515	Y	NA	NA	NA	NA	NA	NA	BAI3	200126	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69594665	69594883	69594694	Y	NA	NA	NA	NA	NA	NA	BAI3	251406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69598127	69598365	69598163	Y	NA	NA	NA	NA	NA	NA	BAI3	254868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69630519	69630829	69630559	Y	BAI3	NA	NA	NA	NA	NA	BAI3	287260	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	69802983	69803339	69803007	Y	NA	NA	NA	NA	NA	NA	BAI3	459724	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	69803382	69803773	69803578	Y	BAI3	NA	NA	NA	NA	NA	BAI3	460123	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	69896068	69896326	69896076	Y	NA	NA	NA	NA	NA	NA	BAI3	552809	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	70479579	70479974	70479889	Y	NA	LMBRD1	NA	NA	NA	NA	LMBRD1	25029	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	71590052	71590374	71590213	Y	FAM135A	NA	NA	NA	NA	NA	B3GAT2	74367	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	71817586	71817689	71817638	Y	B3GAT2	NA	NA	NA	NA	NA	B3GAT2	152845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	72034617	72034728	72034673	Y	NA	OGFRL1	NA	NA	NA	NA	OGFRL1	38111	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	72103736	72104124	72104114	Y	NA	LINC00472	NA	NA	NA	NA	LINC00472	24348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	72598807	72598978	72598957	Y	NA	RIMS1	NA	NA	NA	NA	RIMS1	4401	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	72739447	72739560	72739504	Y	NA	NA	NA	NA	NA	NA	RIMS1	145041	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	72845513	72845515	72845514	Y	NA	NA	NA	NA	NA	NA	RIMS1	251107	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73329727	73330142	73329822	Y	NA	KCNQ5	NA	NA	NA	NA	KCNQ5	207	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73335940	73336259	73335964	Y	NA	KCNQ5	NA	NA	NA	NA	KCNQ5	6420	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73354930	73355043	73354987	Y	NA	KCNQ5	NA	NA	NA	NA	KCNQ5	25410	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73378236	73378609	73378395	Y	NA	KCNQ5	NA	NA	NA	NA	KCNQ5	48716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73504067	73504420	73504243	Y	NA	NA	NA	NA	NA	NA	KCNQ5	174547	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73524800	73525128	73524864	Y	NA	NA	NA	NA	NA	NA	KCNQ5	195280	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	73833038	73833304	73833144	Y	NA	NA	NA	NA	NA	NA	RP11-398K22.12	137634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	74186150	74186447	74186193	Y	MTO1	MB21D1,MTO1,EEF1A1,RP11-505P4.5	NA	NA	NA	NA	MTO1	16849	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	74295249	74295764	74295450	Y	MB21D1,CD109,CD109,EEF1A1	NA	NA	NA	NA	NA	RP11-505P4.5	60647	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	75641321	75641673	75641499	Y	COL12A1	NA	CD109,COL12A1	IMR90	Hi-C	24141950	COL12A1	272094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	76467215	76467333	76467230	Y	NA	MYO6	NA	NA	NA	NA	MYO6	10306	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	79758680	79758772	79758726	Y	NA	PHIP	NA	NA	NA	NA	PHIP	27181	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	79773928	79774085	79774072	Y	NA	PHIP	NA	NA	NA	NA	PHIP	11868	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	79779425	79779709	79779568	Y	NA	PHIP	NA	NA	NA	NA	PHIP	6244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	80246020	80246303	80246162	Y	NA	LCA5	NA	NA	NA	NA	LCA5	845	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	81048044	81048318	81048128	Y	NA	NA	NA	NA	NA	NA	BCKDHB	233680	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	83546132	83546541	83546207	Y	NA	NA	UBE3D,IBTK	IMR90	Hi-C	24141950	DOPEY1	228844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	83745270	83745402	83745336	Y	NA	DOPEY1	NA	NA	NA	NA	DOPEY1	29983	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	83793136	83793338	83793237	Y	PRSS35,DOPEY1	DOPEY1	NA	NA	NA	NA	DOPEY1	17751	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	84877511	84877669	84877594	Y	NA	NA	NA	NA	NA	NA	KIAA1009	57684	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	86655114	86655471	86655235	Y	NA	RNU4-12P	NA	NA	NA	NA	RNU4-12P	45406	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	87257432	87257676	87257554	Y	NA	NA	NA	NA	NA	NA	HTR1E	387348	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	88401154	88401337	88401278	Y	NA	AKIRIN2	NA	NA	NA	NA	AKIRIN2	8590	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	88408243	88408692	88408556	Y	AKIRIN2	AKIRIN2	NA	NA	NA	NA	AKIRIN2	1235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	89796215	89796534	89796231	Y	NA	PNRC1,SRSF12	NA	NA	NA	NA	PNRC1	7745	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	90527291	90527624	90527395	Y	NA	CASP8AP2	NA	NA	NA	NA	MDN1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	90550185	90550523	90550354	Y	NA	MDN1,CASP8AP2	NA	NA	NA	NA	CASP8AP2	12572	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	90937522	90937637	90937581	Y	NA	NA	NA	NA	NA	NA	BACH2	66990	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	90943674	90944075	90943895	Y	MDN1,BACH2,BACH2	NA	NA	NA	NA	NA	BACH2	60552	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	90951466	90952108	90951796	Y	NA	NA	NA	NA	NA	NA	BACH2	52519	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	90994076	90994276	90994132	Y	MDN1,BACH2,BACH2	BACH2	NA	NA	NA	NA	BACH2	10351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	91004075	91004656	91004496	Y	MDN1,BACH2,BACH2	NA	NA	NA	NA	NA	BACH2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	91004830	91005121	91005041	Y	MDN1,BACH2,BACH2	BACH2	NA	NA	NA	NA	BACH2	203	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	91320632	91321099	91320814	Y	MAP3K7,MAP3K7	MAP3K7	NA	NA	NA	NA	MAP3K7	25868	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	94037616	94037704	94037660	Y	NA	NA	NA	NA	NA	NA	EPHA7	89561	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	94127729	94128504	94127840	Y	NA	EPHA7	NA	NA	NA	NA	EPHA7	464	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	96616633	96616738	96616686	Y	FUT9	NA	NA	NA	NA	NA	FUT9	154773	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	97632369	97632997	97632691	Y	NA	NA	NA	NA	NA	NA	MMS22L	96096	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	97681036	97681361	97681334	Y	NA	MMS22L	NA	NA	NA	NA	MMS22L	47732	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	99382979	99383150	99383065	Y	NA	FBXL4	NA	NA	NA	NA	FBXL4	10699	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	99886915	99887218	99887074	Y	NA	COQ3,RP11-98I9.4,PNISR	NA	NA	NA	NA	PNISR	15708	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	99995359	99995841	99995579	Y	PNISR	USP45,CCNC	NA	NA	NA	NA	CCNC	19008	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	100002359	100002730	100002672	Y	PNISR,USP45,LOC100130890	USP45,CCNC,PRDM13	NA	NA	NA	NA	CCNC	12119	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	100007525	100007878	100007702	Y	LOC100130890	USP45,CCNC,PRDM13	NA	NA	NA	NA	CCNC	6971	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	100012296	100012415	100012356	Y	NA	USP45,CCNC,PRDM13	NA	NA	NA	NA	CCNC	2434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	100051584	100051769	100051603	Y	NA	CCNC,PRDM13	NA	NA	NA	NA	PRDM13	837	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	100584000	100584312	100584155	Y	NA	NA	SIM1,ASCC3	IMR90	Hi-C	24141950	RP1-121G13.3	391840	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	101311437	101311450	101311446	Y	NA	ASCC3	NA	NA	NA	NA	ASCC3	15798	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	101862927	101863147	101863037	Y	NA	NA	NA	NA	NA	NA	ASCC3	535679	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	101965513	101965732	101965659	Y	NA	NA	NA	NA	NA	NA	ASCC3	638265	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	102471700	102472091	102472046	Y	NA	NA	NA	NA	NA	NA	ASCC3	1144452	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	105443315	105443377	105443346	Y	HACE1,LIN28B	NA	NA	NA	NA	NA	HACE1	137521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	106433951	106434222	106434177	Y	PRDM1	NA	NA	NA	NA	NA	PRDM1	97973	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	106645133	106645598	106645505	Y	PRDM1	NA	NA	NA	NA	NA	PRDM1	112938	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	108435932	108436209	108436071	Y	NA	OSTM1	LACE1,NR2E1,ARMC2,SESN1,SEC63	IMR90,H1ESC,GM12878,HELA,K562	Hi-C,5C	24141950,22955621	OSTM1	48849	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	108879164	108879427	108879300	Y	SESN1,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	126	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	108879521	108879931	108879808	Y	SESN1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	483	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr6	109269728	109269873	109269801	Y	NA	RP11-249L21.4	SESN1	IMR90	Hi-C	24141950	RP11-249L21.4	42652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	109381114	109381226	109381160	Y	NA	SESN1,CEP57L1	NA	NA	NA	NA	SESN1	32796	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	109672770	109673128	109672949	Y	NA	CD164	NA	NA	NA	NA	CD164	28634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	110018501	110018834	110018668	Y	NA	FIG4	NA	NA	NA	NA	FIG4	8002	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	110456590	110456951	110456841	Y	WASF1,CDC40,C6orf186	WASF1,CDC40	NA	NA	NA	NA	WASF1	42256	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	111560758	111560946	111560852	Y	AMD1,AMD1,SLC16A10,TRAF3IP2,REV3L	KIAA1919	NA	NA	NA	NA	KIAA1919	17605	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	111739300	111739614	111739444	Y	SLC16A10,TRAF3IP2,REV3L	NA	NA	NA	NA	NA	TRAF3IP2-AS1	63100	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	111841823	111842197	111842010	Y	NA	TRAF3IP2-AS1,REV3L	NA	NA	NA	NA	REV3L	38905	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	111889822	111890007	111889856	Y	REV3L	TRAF3IP2	NA	NA	NA	NA	TRAF3IP2	35474	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	112072134	112072549	112072500	Y	REV3L,FYN,FYN,FYN	NA	NA	NA	NA	NA	FYN	120106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	112145008	112145393	112145362	Y	REV3L,TRAF3IP2,FYN,FYN,FYN	FYN	NA	NA	NA	NA	FYN	47262	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	112163238	112163349	112163330	Y	NA	FYN	NA	NA	NA	NA	FYN	29306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	112449250	112449618	112449554	Y	NA	TUBE1	NA	NA	NA	NA	TUBE1	42518	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	112471062	112471110	112471086	Y	NA	NA	NA	NA	NA	NA	TUBE1	64330	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	112535932	112536093	112536020	Y	NA	LAMA4	NA	NA	NA	NA	LAMA4	38048	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	112552727	112553228	112552920	Y	LAMA4	LAMA4	NA	NA	NA	NA	LAMA4	20913	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	114176108	114176553	114176196	Y	MARCKS	NA	NA	NA	NA	NA	MARCKS	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	114662587	114662962	114662866	Y	NA	HS3ST5	NA	NA	NA	NA	HS3ST5	378	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	116469368	116469398	116469382	Y	NA	NT5DC1	NA	NA	NA	NA	NT5DC1	49356	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	116550472	116550927	116550585	Y	KPNA5,TSPYL4,TSPYL1	TSPYL4,DSE,RP3-486I3.4,TSPYL1	NA	NA	NA	NA	TSPYL4	22334	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	116707738	116708095	116707832	Y	ZUFSP,DSE,FAM26F	NA	NA	NA	NA	NA	FAM26F	72438	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	116708158	116708375	116708238	Y	ZUFSP,DSE,FAM26F	NA	NA	NA	NA	NA	FAM26F	72158	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	117804575	117804878	117804739	Y	NA	DCBLD1	NA	NA	NA	NA	DCBLD1	31595	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	118241546	118241910	118241839	Y	NA	SLC35F1	NA	NA	NA	NA	SLC35F1	14857	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	118246881	118246985	118246933	Y	SLC35F1	SLC35F1	NA	NA	NA	NA	SLC35F1	20192	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	118648714	118648964	118648839	Y	NA	NA	NA	NA	NA	NA	RP11-632C17__A.1	330576	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	119166106	119166505	119166300	Y	NA	ASF1A	NA	NA	NA	NA	ASF1A	46879	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	119218988	119219366	119219177	Y	MCM9	ASF1A,MCM9	NA	NA	NA	NA	ASF1A	5604	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	119606195	119606320	119606258	Y	NA	NA	NA	NA	NA	NA	MAN1A1	62606	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	121398601	121398951	121398918	Y	NA	NA	NA	NA	NA	NA	GJA1	355887	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	121399720	121399938	121399829	Y	NA	NA	NA	NA	NA	NA	GJA1	354900	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	121758280	121758805	121758450	Y	GJA1	GJA1,RNU4-35P	NA	NA	NA	NA	GJA1	3442	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	125315315	125315695	125315334	Y	NA	RNF217	NA	NA	NA	NA	RNF217	33624	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	125622252	125622475	125622321	Y	NA	HDDC2	NA	NA	NA	NA	HDDC2	970	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	126071522	126071828	126071676	Y	NA	HEY2,NCOA7	NA	NA	NA	NA	HEY2	4712	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	126197747	126198095	126197755	Y	NA	NA	NA	NA	NA	NA	HINT3	77832	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	126241150	126241321	126241235	Y	NCOA7	HINT3	NA	NA	NA	NA	HINT3	34606	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	126579500	126579620	126579560	Y	NA	NA	NA	NA	NA	NA	CENPW	79700	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	127792743	127793007	127792875	Y	NA	RP3-403A15.1,SOGA3	NA	NA	NA	NA	RP3-403A15.1	37962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	127892310	127892704	127892511	Y	NA	NA	NA	NA	NA	NA	SOGA3	54164	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	127980874	127981174	127981075	Y	NA	NA	NA	NA	NA	NA	SOGA3	142728	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	128331151	128331455	128331303	Y	NA	NA	NA	NA	NA	NA	SOGA3	493005	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	128607751	128608140	128608092	Y	NA	NA	NA	NA	NA	NA	PTPRK	231730	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	128840669	128840970	128840936	Y	PTPRK,PTPRK	PTPRK	NA	NA	NA	NA	PTPRK	799	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	131595636	131595766	131595737	Y	MED23,AKAP7	NA	NA	NA	NA	NA	AKAP7	140830	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	131929733	131930009	131929873	Y	NA	MED23,RNU4-18P	NA	NA	NA	NA	MED23	17360	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	132811280	132811490	132811390	Y	VNN2,VNN2,VNN2,VNN1,STX7	STX7	NA	NA	NA	NA	STX7	20847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	134636367	134636606	134636545	Y	SGK1	SGK1	NA	NA	NA	NA	SGK1	644	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	135235486	135235616	135235552	Y	NA	NA	NA	NA	NA	NA	HBS1L	186578	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	135344059	135344242	135344151	Y	NA	NA	NA	NA	NA	NA	HBS1L	77952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	135636764	135637196	135637190	Y	NA	NA	NA	NA	NA	NA	MYB	136311	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	136434966	136435173	136435049	Y	BCLAF1	NA	NA	NA	NA	NA	BCLAF1	173816	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	136839838	136840084	136840036	Y	NA	MAP7	NA	NA	NA	NA	MAP7	29873	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	137227679	137227915	137227797	Y	NA	NA	NA	NA	NA	NA	PEX7	85962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138022263	138022940	138022489	Y	IFNGR1,OLIG3,TNFAIP3	NA	TNFAIP3,IFNGR1,PERP	IMR90	Hi-C	24141950	TNFAIP3	163411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138027517	138027801	138027604	Y	NA	NA	TNFAIP3,PERP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	158550	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138075692	138075815	138075736	Y	TNFAIP3	NA	TNFAIP3	IMR90	Hi-C	24141950	TNFAIP3	110536	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138133089	138133355	138133227	Y	TNFAIP3	NA	TNFAIP3	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	52996	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138216222	138216422	138216312	Y	TNFAIP3	TNFAIP3	NA	NA	NA	NA	TNFAIP3	29871	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138353138	138353418	138353320	Y	PERP	NA	PERP	MCF7	ChIA-PET	22265404	PERP	73230	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138523816	138523995	138523837	Y	NA	KIAA1244	NA	NA	NA	NA	KIAA1244	42758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138821349	138821443	138821380	Y	REPS1,NHSL1	NA	NA	NA	NA	NA	HEBP2	98681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	138876782	138877039	138876959	Y	NA	NA	NA	NA	NA	NA	NHSL1	134669	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	139209045	139209410	139209228	Y	NA	NA	NA	NA	NA	NA	REPS1	97988	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	139348964	139349250	139349073	Y	NA	REPS1	NA	NA	NA	NA	REPS1	41566	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	139350632	139351255	139350885	Y	NA	REPS1	NA	NA	NA	NA	REPS1	43234	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	139697079	139697371	139697327	Y	NA	CITED2	NA	NA	NA	NA	CITED2	3322	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	139852770	139852917	139852822	Y	NA	NA	LOC100132735,CITED2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CITED2	159013	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	141884052	141884255	141884131	Y	NA	NA	CITED2	MCF7	ChIA-PET	22265404	VTA1	582112	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	142335769	142335959	142335859	Y	NA	NA	NA	NA	NA	NA	VTA1	130408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	143117753	143118019	143117854	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	146319	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	143247398	143248213	143248022	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	16125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	143503002	143503176	143503018	Y	NA	NA	NA	NA	NA	NA	AIG1	123369	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	143864167	143864345	143864273	Y	NA	FUCA2,PHACTR2	NA	NA	NA	NA	PHACTR2	8185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	144053697	144053884	144053799	Y	STX11,PLAGL1	NA	NA	NA	NA	NA	LTV1	108597	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	144283965	144283971	144283968	Y	NA	NA	NA	NA	NA	NA	PLAGL1	99764	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	144284201	144284585	144284512	Y	NA	NA	NA	NA	NA	NA	PLAGL1	99150	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	144302032	144302409	144302359	Y	PLAGL1	NA	NA	NA	NA	NA	PLAGL1	81326	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	144657152	144657284	144657222	Y	NA	NA	NA	NA	NA	NA	TPT1P4	137050	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	144931961	144932452	144932213	Y	NA	NA	NA	NA	NA	NA	TPT1P4	411859	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	145131744	145132215	145131879	Y	NA	NA	NA	NA	NA	NA	TPT1P4	611642	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	145136843	145137199	145137021	Y	NA	NA	NA	NA	NA	NA	TPT1P4	616741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	145147432	145147802	145147573	Y	NA	NA	NA	NA	NA	NA	TPT1P4	627330	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	149080716	149081059	149080880	Y	NA	UST	NA	NA	NA	NA	UST	14252	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	150010989	150011176	150011138	Y	NA	KATNA1,LATS1	NA	NA	NA	NA	LATS1	26216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	150076607	150076998	150076645	Y	KATNA1,LATS1	LATS1,PCMT1,NUP43	NA	NA	NA	NA	NUP43	7806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	150944036	150944676	150944139	Y	PLEKHG1	PLEKHG1	NA	NA	NA	NA	PLEKHG1	25037	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	150955970	150956257	150955981	Y	PLEKHG1	PLEKHG1	NA	NA	NA	NA	PLEKHG1	36971	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	151373285	151373500	151373395	Y	NA	RP1-292B18.1	NA	NA	NA	NA	RP1-292B18.1	45165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	151730569	151730753	151730690	Y	NA	ZBTB2,RMND1,C6orf211	NA	NA	NA	NA	ZBTB2	19886	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	152495125	152495413	152495269	Y	NA	NA	NA	NA	NA	NA	SYNE1	461523	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	152889271	152889451	152889361	Y	NA	NA	NA	NA	NA	NA	SYNE1	67485	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	153358098	153358156	153358117	Y	SYNE1,RGS17	MTRF1L	NA	NA	NA	NA	MTRF1L	36278	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	153411582	153411939	153411751	Y	MTRF1L	RGS17	NA	NA	NA	NA	RGS17	38445	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	153422676	153422935	153422837	Y	MTRF1L	RGS17	NA	NA	NA	NA	RGS17	27449	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	154753926	154754309	154754118	Y	CNKSR3	NA	NA	NA	NA	NA	CNKSR3	75484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	155193821	155194059	155193913	Y	NA	TIAM2	TIAM2,TFB1M,CLDN20	IMR90	Hi-C	24141950	TIAM2	41990	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	155545212	155545590	155545426	Y	SCAF8	RP11-477D19.2	NA	NA	NA	NA	RP11-477D19.2	30268	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	155590165	155590417	155590245	Y	NA	RP11-477D19.2,TFB1M	NA	NA	NA	NA	RP11-477D19.2	14307	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	155636183	155636317	155636271	Y	NA	TFB1M	NA	NA	NA	NA	TFB1M	2556	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	157007979	157008724	157008580	Y	ARID1B	NA	MIR4466,ARID1B,NOX3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ARID1B	88339	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	157101566	157102083	157101700	Y	ARID1B	ARID1B	NA	NA	NA	NA	ARID1B	4503	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr6	157160663	157161314	157160954	Y	NA	NA	NA	NA	NA	NA	ARID1B	63600	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	157173280	157173444	157173363	Y	NA	NA	NA	NA	NA	NA	ARID1B	76217	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	157274060	157274135	157274104	Y	NA	NA	NA	NA	NA	NA	ARID1B	176997	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	157297453	157297730	157297519	Y	NA	NA	NA	NA	NA	NA	ARID1B	200390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	157342507	157343524	157343342	Y	ARID1B,ZDHHC14	NA	NA	NA	NA	NA	ARID1B	245444	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	157542479	157542718	157542566	Y	NA	NA	NA	NA	NA	NA	TMEM242	199915	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	157726321	157726550	157726459	Y	NA	TMEM242	NA	NA	NA	NA	TMEM242	16083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	157738321	157738749	157738506	Y	NA	TMEM242	NA	NA	NA	NA	TMEM242	3884	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr6	158254729	158255396	158255020	Y	NA	SNX9	NA	NA	NA	NA	SNX9	12433	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	158314373	158314686	158314419	Y	SNX9	NA	NA	NA	NA	NA	SNX9	72077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	158439513	158439767	158439649	Y	NA	SYNJ2	NA	NA	NA	NA	SYNJ2	38625	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	158981403	158981866	158981661	Y	NA	TMEM181	NA	NA	NA	NA	TMEM181	25935	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	158982051	158982465	158982168	Y	NA	TMEM181	NA	NA	NA	NA	TMEM181	26583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	159171374	159171393	159171384	Y	NA	NA	NA	NA	NA	NA	EZR	67051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	159211450	159211647	159211549	Y	TAGAP,SYTL3,EZR,EZR	EZR	NA	NA	NA	NA	EZR	26797	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	159237852	159238517	159238245	Y	TAGAP,SYTL3,EZR,EZR	NA	NA	NA	NA	NA	EZR	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	159507236	159507417	159507327	Y	TAGAP	NA	RSPH3	IMR90	Hi-C	24141950	FNDC1	81012	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	159537511	159537808	159537588	Y	TAGAP	NA	NA	NA	NA	NA	FNDC1	50621	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	159890219	159890368	159890294	Y	NA	NA	FNDC1	IMR90	Hi-C	24141950	WTAP	254249	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	160141572	160141909	160141740	Y	MAS1,IGF2R,SOD2,WTAP,WTAP	WTAP,ACAT2,SOD2	LOC100129518,ACAT2,WTAP,SOD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WTAP	2708	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	160404785	160405521	160405109	Y	SOD2,WTAP,WTAP,MAS1,IGF2R	IGF2R	NA	NA	NA	NA	IGF2R	16654	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	161545851	161546111	161545978	Y	AGPAT4	NA	NA	NA	NA	NA	MAP3K4	135092	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	162477618	162478021	162477976	Y	NA	NA	NA	NA	NA	NA	PACRG	668143	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	164758879	164759308	164759212	Y	NA	NA	PARK2,DKFZp451B082,PACRG	IMR90	Hi-C	24141950	QKI	925847	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr6	166419567	166419719	166419697	Y	PRR18	LINC00473	NA	NA	NA	NA	LINC00473	20031	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	166420168	166420416	166420184	Y	T	LINC00473	NA	NA	NA	NA	LINC00473	20632	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	167002413	167002718	167002541	Y	SFT2D1	NA	NA	NA	NA	NA	SFT2D1	248334	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	167028527	167028763	167028637	Y	NA	NA	NA	NA	NA	NA	SFT2D1	274448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	167411045	167411413	167411177	Y	NA	RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP	NA	NA	NA	NA	FGFR1OP	375	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	168216462	168216639	168216532	Y	NA	MLLT4	NA	NA	NA	NA	MLLT4	8963	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr6	169308928	169309266	169309084	Y	THBS2	NA	WDR27,LINC00574,PHF10,C6orf70,PSMB1,SMOC2,LINC00242	IMR90	Hi-C	24141950	THBS2	342873	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr6	170054470	170055295	170054892	Y	TCTE3	WDR27,C6orf120	NA	NA	NA	NA	WDR27	44864	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	170461603	170461884	170461744	Y	NA	NA	LINC00574,LOC154449	IMR90	Hi-C	24141950	DLL1	135677	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	170491997	170492052	170492021	Y	NA	NA	NA	NA	NA	NA	DLL1	105509	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	170600439	170600921	170600644	Y	NA	DLL1,FAM120B	NA	NA	NA	NA	FAM120B	2648	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr6	170692180	170692479	170692329	Y	NA	NA	NA	NA	NA	NA	FAM120B	94389	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	508827	509102	508987	Y	ADAP1	PDGFA	NA	NA	NA	NA	PDGFA	48831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	627421	627837	627508	Y	NA	NA	NA	NA	NA	NA	PDGFA	69488	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	652642	652893	652768	Y	PRKAR1B,ADAP1	NA	NA	NA	NA	NA	PDGFA	94709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	655576	655910	655797	Y	NA	NA	NA	NA	NA	NA	PDGFA	97643	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	919141	919296	919237	Y	NA	GET4	NA	NA	NA	NA	GET4	4952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	1066965	1067028	1066969	Y	NA	GPR146	NA	NA	NA	NA	GPR146	15184	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	1329910	1330257	1330187	Y	NA	NA	UNCX	IMR90	Hi-C	24141950	ZFAND2A	131515	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	1546091	1546367	1546260	Y	NA	MICALL2,INTS1,MAFK	NA	NA	NA	NA	INTS1	2602	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	1573524	1573718	1573598	Y	ZFAND2A,MAFK	INTS1,MAFK,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	5174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2081068	2081519	2081307	Y	NA	NA	NA	NA	NA	NA	MAD1L1	189359	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2124507	2124641	2124577	Y	NA	NA	NA	NA	NA	NA	MAD1L1	146237	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2143904	2144149	2144041	Y	LFNG	NA	NA	NA	NA	NA	MAD1L1	126729	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2145561	2145831	2145692	Y	NA	NA	NA	NA	NA	NA	MAD1L1	125047	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2351826	2352447	2352374	Y	SNX8	EIF3B,SNX8	NA	NA	NA	NA	EIF3B	39274	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2356665	2356933	2356799	Y	NA	EIF3B,SNX8	NA	NA	NA	NA	EIF3B	34788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2674160	2674375	2674212	Y	SNX8,TTYH3	TTYH3	NA	NA	NA	NA	TTYH3	4575	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2800822	2801226	2800961	Y	NA	NA	NA	NA	NA	NA	AC006028.11	72029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2812534	2812892	2812775	Y	SNX8,LFNG,LFNG,GNA12	NA	NA	NA	NA	NA	AC006028.11	60363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2860040	2860490	2860319	Y	LFNG,LFNG,GNA12	AC006028.11,GNA12	NA	NA	NA	NA	AC006028.11	12765	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	2875013	2875360	2875015	Y	NA	AC006028.11,GNA12	NA	NA	NA	NA	AC006028.11	1758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	3350976	3351346	3351174	Y	NA	SDK1	NA	NA	NA	NA	SDK1	11896	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	3528330	3528371	3528351	Y	NA	NA	NA	NA	NA	NA	SDK1	189250	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	3955874	3956076	3956015	Y	NA	NA	NA	NA	NA	NA	SDK1	616794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	4681329	4681565	4681443	Y	MMD2	NA	SDK1,FOXK1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXK1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	4755132	4755354	4755253	Y	NA	NA	NA	NA	NA	NA	FOXK1	73744	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	4764796	4765177	4765030	Y	KIAA0415	NA	NA	NA	NA	NA	FOXK1	83408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5231323	5231672	5231498	Y	WIPI2	WIPI2	NA	NA	NA	NA	WIPI2	3504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5379232	5379531	5379399	Y	NA	NA	NA	NA	NA	NA	SLC29A4	67232	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5419074	5419498	5419154	Y	NA	TNRC18	NA	NA	NA	NA	TNRC18	43547	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5469639	5470034	5469987	Y	NA	TNRC18	TNRC18,FBXL18,ACTB	MCF7,K562	ChIA-PET	22265404	TNRC18	6594	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5471668	5472052	5471860	Y	NA	TNRC18	WIPI2,SLC29A4,TNRC18,RNF216	IMR90	Hi-C	24141950	TNRC18	8623	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5609541	5610012	5609880	Y	SLC29A4,TNRC18,FBXL18,FSCN1	ACTB,FSCN1	RNF216,FSCN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACTB	8126	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr7	5631413	5631525	5631469	Y	NA	ACTB,FSCN1	RNF216	IMR90	Hi-C	24141950	FSCN1	974	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5650367	5650762	5650403	Y	NA	ACTB,FSCN1	NA	NA	NA	NA	FSCN1	19928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5718052	5718263	5718155	Y	USP42	NA	NA	NA	NA	NA	FSCN1	87613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	5724329	5724708	5724518	Y	NA	NA	NA	NA	NA	NA	FSCN1	93890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	6677371	6677641	6677424	Y	DAGLB,ZNF12,C7orf26	C7orf26,ZNF316,AC073343.13	NA	NA	NA	NA	ZNF316	2418	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	6682292	6682670	6682512	Y	C7orf26	ZNF316,AC073343.13	NA	NA	NA	NA	ZNF316	7339	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	6741580	6741996	6741754	Y	C7orf26,ZNF853,C7orf28B,ZNF12	AC073343.13,ZNF12,PMS2CL	NA	NA	NA	NA	ZNF12	2558	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	7759003	7759285	7759121	Y	NA	RPA3,RPL23AP51	NA	NA	NA	NA	RPA3	2765	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	8016516	8016759	8016566	Y	GLCCI1	GLCCI1	NA	NA	NA	NA	GLCCI1	10091	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	9666155	9666488	9666331	Y	NA	NA	NA	NA	NA	NA	HSPA8P8	822450	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	11293871	11294115	11293993	Y	NA	NA	NA	NA	NA	NA	PHF14	282372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	11499121	11499331	11499225	Y	NA	NA	NA	NA	NA	NA	THSD7A	370493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	11745887	11746284	11746085	Y	NA	NA	NA	NA	NA	NA	THSD7A	123540	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	11827353	11827497	11827425	Y	THSD7A	THSD7A	NA	NA	NA	NA	THSD7A	42327	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	11832549	11832888	11832860	Y	NA	THSD7A	NA	NA	NA	NA	THSD7A	36936	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	11859641	11859960	11859801	Y	THSD7A	THSD7A	NA	NA	NA	NA	THSD7A	9864	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr7	11860647	11861050	11860853	Y	THSD7A	THSD7A	NA	NA	NA	NA	THSD7A	8774	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	11867283	11867421	11867420	Y	NA	THSD7A	NA	NA	NA	NA	THSD7A	2403	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr7	11869426	11869707	11869551	Y	NA	THSD7A	NA	NA	NA	NA	THSD7A	117	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	13694099	13694114	13694107	Y	NA	NA	NA	NA	NA	NA	ETV1	334936	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	16707771	16707941	16707875	Y	NA	ANKMY2,BZW2	NA	NA	NA	NA	BZW2	24015	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	18161165	18161355	18161260	Y	NA	HDAC9	NA	NA	NA	NA	HDAC9	36593	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	18264800	18264892	18264864	Y	HDAC9	NA	NA	NA	NA	NA	HDAC9	140228	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	18285971	18286293	18286132	Y	SNX13,HDAC9,HDAC9,HDAC9	NA	NA	NA	NA	NA	HDAC9	161399	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	18611788	18612131	18611882	Y	HDAC9	NA	NA	NA	NA	NA	HDAC9	487216	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	18678257	18678434	18678328	Y	NA	NA	NA	NA	NA	NA	TWIST1	476861	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	18688713	18688867	18688789	Y	HDAC9,HDAC9	NA	NA	NA	NA	NA	TWIST1	466428	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	18695404	18695888	18695683	Y	NA	NA	NA	NA	NA	NA	TWIST1	459407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	18828374	18828759	18828502	Y	NA	NA	NA	NA	NA	NA	TWIST1	326536	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	19024350	19024628	19024489	Y	NA	NA	NA	NA	NA	NA	TWIST1	130667	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	20254261	20255002	20254926	Y	MACC1	NA	NA	NA	NA	NA	ITGB8	113323	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	20278131	20278917	20278549	Y	NA	NA	MACC1	K562	ChIA-PET	22265404	ITGB8	89408	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	20478077	20478972	20478535	Y	ITGB8	NA	TMEM196	IMR90	Hi-C	24141950	ITGB8	109752	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	21120779	21120894	21120878	Y	NA	NA	NA	NA	NA	NA	SP4	344758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	21502446	21502711	21502550	Y	SP4	SP4	NA	NA	NA	NA	SP4	36794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	22122614	22122929	22122771	Y	NA	NA	RAPGEF5	IMR90	Hi-C	24141950	CDCA7L	138912	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	22253669	22254026	22253848	Y	NA	NA	NA	NA	NA	NA	RAPGEF5	140737	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	22861021	22861212	22861181	Y	NA	TOMM7	NA	NA	NA	NA	TOMM7	551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	22894313	22894860	22894668	Y	STEAP1B,TOMM7	TOMM7	NA	NA	NA	NA	TOMM7	33843	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr7	23348040	23348443	23348292	Y	KLHL7,KLHL7,NUPL2,IGF2BP3	NA	NA	NA	NA	NA	GPNMB	74454	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	23488792	23489118	23488955	Y	KLHL7,NUPL2,IGF2BP3	IGF2BP3,AC079780.3	NA	NA	NA	NA	IGF2BP3	18968	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	23510676	23511223	23510889	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3,AC079780.3	NA	NA	NA	NA	IGF2BP3	2590	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	23513815	23514383	23514045	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3,AC079780.3	MALSU1	K562	ChIA-PET	22265404	AC079780.3	3989	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	24626460	24626850	24626473	Y	NA	MPP6	NA	NA	NA	NA	MPP6	15573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	25009429	25009748	25009721	Y	NA	OSBPL3	NA	NA	NA	NA	OSBPL3	9505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	25894654	25894946	25894846	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	294914	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr7	25896245	25896461	25896419	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	293399	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	25896515	25897081	25896801	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	292779	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	25901745	25902114	25902023	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	287746	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr7	26460550	26460642	26460600	Y	NA	AC004540.4,AC004540.5	NA	NA	NA	NA	AC004540.5	24337	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	26815721	26816027	26815980	Y	SNX10,SNX10,SKAP2	NA	NA	NA	NA	NA	SKAP2	216831	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	27176174	27176251	27176224	Y	HOXA3,HOXA3,HOXA4,HOXA5	HOTAIRM1,HOXA1,HOXA2,HOXA-AS2,HOXA5,HOXA6,HOXA3,HOXA7,HOXA10-AS,HOXA9,RP1-170O19.20,HOXA10,HOXA11	NA	NA	NA	NA	HOXA5	5036	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	27206716	27206932	27206874	Y	HOXA7,HOXA9,HOXA13,HOXA11,HOXA10	HOXA5,HOXA6,HOXA3,HOXA7,HOXA10-AS,HOXA9,RP1-170O19.20,HOXA10,HOXA11	NA	NA	NA	NA	HOXA10-AS	478	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	27876967	27877264	27877116	Y	CREB5	NA	NA	NA	NA	NA	AC004549.6	98953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	27980070	27980278	27980209	Y	NA	NA	NA	NA	NA	NA	AC004549.6	202056	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	28194446	28194874	28194789	Y	NA	JAZF1-AS1,JAZF1	NA	NA	NA	NA	JAZF1-AS1	23067	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	28666375	28666568	28666485	Y	NA	NA	NA	NA	NA	NA	TRIL	329366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	29235795	29236387	29235996	Y	CHN2	CPVL	NA	NA	NA	NA	CPVL	2728	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	29464630	29464858	29464676	Y	WIPF3	NA	NA	NA	NA	NA	CPVL	231563	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	30212903	30212961	30212932	Y	NA	AC007036.5	NA	NA	NA	NA	AC007036.5	17756	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	30257510	30257901	30257519	Y	NA	NA	NA	NA	NA	NA	AC007036.5	62363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	30387689	30388072	30387783	Y	NOD1,ZNRF2	AC006978.6	NA	NA	NA	NA	AC006978.6	20915	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	30500037	30500161	30500099	Y	NA	NOD1	NA	NA	NA	NA	NOD1	16239	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	30636092	30636194	30636111	Y	NA	GGCT,GARS	NA	NA	NA	NA	GARS	3795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	32944853	32945232	32945065	Y	KBTBD2	KBTBD2,RP9P,FKBP9	NA	NA	NA	NA	KBTBD2	13110	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	33708733	33708947	33708840	Y	NA	NA	NA	NA	NA	NA	BBS9	541877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	36480174	36480717	36480189	Y	NA	NA	NA	NA	NA	NA	KIAA0895	52440	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	36843340	36843728	36843600	Y	ELMO1	NPM1P18	NA	NA	NA	NA	NPM1P18	12836	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	36938916	36939307	36939244	Y	NA	NA	NA	NA	NA	NA	NPM1P18	82352	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	36998037	36998382	36998290	Y	NA	NA	NA	NA	NA	NA	NPM1P18	141473	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	37866533	37866785	37866612	Y	NA	NA	NA	NA	NA	NA	EPDR1	145087	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	39661947	39662014	39661981	Y	NA	RALA	NA	NA	NA	NA	RALA	865	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	39695521	39695649	39695585	Y	NA	RALA	NA	NA	NA	NA	RALA	34439	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	40088776	40089159	40088837	Y	NA	NA	NA	NA	NA	NA	CDK13	101140	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	40946906	40947042	40946974	Y	NA	NA	C7orf10,LOC285954,INHBA	IMR90	Hi-C	24141950	CDK13	959270	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	42047614	42048012	42047844	Y	NA	NA	NA	NA	NA	NA	GLI3	227457	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	42120488	42120725	42120693	Y	NA	NA	NA	NA	NA	NA	GLI3	154744	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	42533163	42533415	42533331	Y	NA	NA	GLI3	IMR90	Hi-C	24141950	GLI3	257694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	42896548	42896903	42896642	Y	NA	NA	GLI3	IMR90	Hi-C	24141950	C7orf25	53001	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	42927750	42928726	42928340	Y	NA	C7orf25,MRPL32,PSMA2	NA	NA	NA	NA	C7orf25	21178	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	43625293	43625372	43625313	Y	URGCP,STK17A	STK17A	NA	NA	NA	NA	STK17A	4936	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43625905	43626316	43625996	Y	URGCP,STK17A	STK17A	C7orf44	IMR90	Hi-C	24141950	STK17A	5548	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43644873	43645023	43645002	Y	POLM,DBNL,STK17A	STK17A	NA	NA	NA	NA	STK17A	24516	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	43657815	43658085	43657951	Y	POLM,STK17A,URGCP	STK17A	NA	NA	NA	NA	STK17A	37458	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	43658377	43658532	43658408	Y	POLM,STK17A,URGCP	STK17A	NA	NA	NA	NA	STK17A	38020	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	43659947	43660692	43660336	Y	DBNL,STK17A	STK17A	NA	NA	NA	NA	STK17A	39590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43670120	43670185	43670135	Y	POLM,DBNL,STK17A	STK17A	NA	NA	NA	NA	STK17A	49763	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43676905	43677264	43677045	Y	POLM,DBNL,STK17A,URGCP	NA	NA	NA	NA	NA	STK17A	56548	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43732901	43733056	43732913	Y	DBNL,STK17A	NA	NA	NA	NA	NA	BLVRA	63223	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43740255	43740653	43740556	Y	GCK	NA	NA	NA	NA	NA	BLVRA	55626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	43959007	43959429	43959215	Y	NA	URGCP,UBE2D4	NA	NA	NA	NA	URGCP	4581	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	44085815	44086626	44086335	Y	STK17A,DBNL,POLM	POLR2J4,DBNL,PGAM2,POLM	NA	NA	NA	NA	DBNL	3576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	44426024	44426371	44426281	Y	NA	NA	NA	NA	NA	NA	CAMK2B	53848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	44436686	44437032	44436900	Y	NA	NA	NA	NA	NA	NA	CAMK2B	64510	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	44616133	44616490	44616314	Y	NA	DDX56,TMED4,OGDH	NA	NA	NA	NA	TMED4	3396	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	44884505	44884603	44884554	Y	NA	H2AFV,PURB	NA	NA	NA	NA	H2AFV	1079	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	45518614	45518951	45518783	Y	CCM2	NA	NA	NA	NA	NA	ADCY1	92788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	46920965	46921354	46921105	Y	NA	NA	NA	NA	NA	NA	TNS3	698802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	47391456	47391672	47391564	Y	C7orf65	NA	NA	NA	NA	NA	TNS3	228484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	47496897	47497228	47497063	Y	NA	NA	NA	NA	NA	NA	TNS3	122928	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	48031393	48031616	48031481	Y	HUS1	HUS1,C7orf57	HUS1	K562	ChIA-PET	22265404	HUS1	14215	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	50346944	50347066	50347038	Y	IKZF1	NA	NA	NA	NA	NA	FIGNL1	169022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	50615386	50615579	50615483	Y	GRB10	NA	NA	NA	NA	NA	FIGNL1	99298	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	51544453	51544703	51544577	Y	NA	NA	NA	NA	NA	NA	COBL	161938	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	55142882	55143327	55143024	Y	NA	NA	NA	NA	NA	NA	EGFR	58168	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	55322570	55322956	55322611	Y	EGFR	CALM1P2	EGFR,SEC61G	IMR90	Hi-C	24141950	CALM1P2	2993	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	55529793	55530311	55530129	Y	ZNF713,VOPP1	NA	NA	NA	NA	NA	LANCL2	98652	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	55541787	55541962	55541880	Y	NA	NA	NA	NA	NA	NA	VOPP1	96719	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	55542922	55542955	55542935	Y	VOPP1	NA	NA	NA	NA	NA	VOPP1	95726	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	55600079	55600443	55600389	Y	VOPP1	VOPP1	NA	NA	NA	NA	VOPP1	38238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	55600779	55601841	55601199	Y	VOPP1	VOPP1	NA	NA	NA	NA	VOPP1	36840	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	56606357	56606502	56606382	Y	LOC389493	NA	NA	NA	NA	NA	CHCHD2	434088	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	64072607	64072919	64072776	Y	NA	NA	NA	NA	NA	NA	ZNF680	51123	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	65613460	65613645	65613556	Y	ASL,ASL	CRCP	NA	NA	NA	NA	CRCP	35869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	65878387	65878723	65878560	Y	RABGEF1,KCTD7	NA	ASL,CRCP,TPST1,LINC00174	IMR90	Hi-C	24141950	GS1-124K5.3	77830	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr7	66152523	66152575	66152558	Y	RABGEF1,KCTD7	RP4-756H11.3,RABGEF1	KCTD7,LOC493754,RABGEF1	IMR90	Hi-C	24141950	RABGEF1	7372	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	66184244	66184571	66184390	Y	NA	RABGEF1	LOC493754,RABGEF1,LOC729156	IMR90	Hi-C	24141950	RABGEF1	39093	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	69091011	69091330	69091153	Y	NA	AUTS2	NA	NA	NA	NA	AUTS2	29106	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	69409562	69409698	69409630	Y	NA	NA	NA	NA	NA	NA	AUTS2	347657	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	70204788	70204872	70204831	Y	NA	NA	NA	NA	NA	NA	WBSCR17	390283	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	72929530	72929887	72929777	Y	NA	BAZ1B,BCL7B	NA	NA	NA	NA	BAZ1B	4721	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	73062013	73062614	73062579	Y	BAZ1B,ABHD11,MLXIPL,STX1A	WBSCR22,DNAJC30	MLXIPL,MIR4284,WBSCR22,STX1A	IMR90	Hi-C	24141950	WBSCR22	32741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	73132412	73132545	73132481	Y	LAT2,BCL7B	WBSCR22,DNAJC30,STX1A,ABHD11	NA	NA	NA	NA	STX1A	410	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	73153813	73154099	73154081	Y	FZD9,STX1A,ABHD11,CLDN4,CLDN3	STX1A,ABHD11,CLDN3	NA	NA	NA	NA	ABHD11	2616	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	73443567	73443942	73443908	Y	CLIP2,ELN	ELN	NA	NA	NA	NA	ELN	3448	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	73739145	73739306	73739226	Y	NA	CLIP2	NA	NA	NA	NA	CLIP2	37340	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	73869161	73869472	73869346	Y	NA	GTF2IRD1	NA	NA	NA	NA	GTF2IRD1	3041	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	74020929	74021149	74021053	Y	NA	GTF2I	NA	NA	NA	NA	GTF2I	48845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	74138320	74138615	74138328	Y	NA	NA	NA	NA	NA	NA	GTF2I	68326	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	75268782	75269322	75269061	Y	NA	NA	NA	NA	NA	NA	HIP1	96958	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	75465283	75465439	75465360	Y	MDH2	RHBDD2	STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR	IMR90	Hi-C	24141950	RHBDD2	4481	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	75567331	75567651	75567437	Y	POR	POR	NA	NA	NA	NA	POR	40813	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	75599122	75599360	75599199	Y	NA	TMEM120A	NA	NA	NA	NA	TMEM120A	22617	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	75675722	75675985	75675853	Y	NA	STYXL1,MDH2	NA	NA	NA	NA	MDH2	353	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	75795833	75796053	75795969	Y	RHBDD2,POR	SRRM3	SRRM3,HSPB1,MDH2,STYXL1	IMR90	Hi-C	24141950	SRRM3	33163	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	75916837	75917122	75916978	Y	NA	HSPB1	NA	NA	NA	NA	HSPB1	12739	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	75923846	75924306	75924205	Y	HSPB1	HSPB1	NA	NA	NA	NA	HSPB1	5555	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	75947305	75947626	75947472	Y	RHBDD2,SRRM3	HSPB1,YWHAG	NA	NA	NA	NA	HSPB1	17444	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	75948116	75948327	75948250	Y	RHBDD2	HSPB1,YWHAG	NA	NA	NA	NA	HSPB1	18255	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	76009173	76009680	76009431	Y	POR	YWHAG	NA	NA	NA	NA	YWHAG	22825	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	76820393	76820583	76820488	Y	NA	NA	NA	NA	NA	NA	FAM185BP	70960	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	77177634	77177834	77177685	Y	FGL2,PION,PTPN12,PTPN12	PTPN12	NA	NA	NA	NA	PTPN12	13042	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	77428722	77429286	77429067	Y	PION,PTPN12,RSBN1L,PHTF2,PHTF2	TMEM60,PHTF2	NA	NA	NA	NA	PHTF2	2600	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	77561991	77562080	77562036	Y	NA	NA	NA	NA	NA	NA	PHTF2	135869	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	77753891	77754159	77754025	Y	NA	NA	NA	NA	NA	NA	PHTF2	327769	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	80171671	80172049	80171853	Y	NA	NA	GNAT3,CD36	IMR90	Hi-C	24141950	SEMA3C	377626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	80272863	80273241	80273058	Y	NA	NA	NA	NA	NA	NA	SEMA3C	276434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	81553797	81553880	81553856	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	517234	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	81582871	81583219	81583134	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	487895	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	81584968	81585322	81585145	Y	CACNA2D1	NA	NA	NA	NA	NA	CACNA2D1	485792	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	81590210	81590492	81590289	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	480622	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	81655164	81655347	81655329	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	415767	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	81851268	81851277	81851273	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	219837	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	81894820	81895003	81894975	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	176111	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	81927516	81927685	81927601	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	143429	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	82004642	82004673	82004658	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	66441	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	82014296	82014582	82014440	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	56532	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	82063702	82063952	82063837	Y	CACNA2D1	CACNA2D1	NA	NA	NA	NA	CACNA2D1	7162	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	84613691	84613734	84613712	Y	NA	AC074183.4	NA	NA	NA	NA	AC074183.4	46130	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	84814304	84814737	84814457	Y	NA	SEMA3D	NA	NA	NA	NA	SEMA3D	133	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	86534596	86534997	86534797	Y	NA	NA	NA	NA	NA	NA	KIAA1324L	152018	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	86563227	86563622	86563425	Y	NA	NA	NA	NA	NA	NA	KIAA1324L	123393	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	86637666	86638039	86637853	Y	NA	KIAA1324L	NA	NA	NA	NA	KIAA1324L	48976	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	87389107	87389401	87389254	Y	NA	NA	NA	NA	NA	NA	DBF4	114130	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	87482976	87483203	87483077	Y	NA	DBF4,SLC25A40	NA	NA	NA	NA	DBF4	20328	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	88029071	88029091	88029081	Y	NA	NA	NA	NA	NA	NA	SRI	174763	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	90600966	90601241	90601095	Y	NA	NA	NA	NA	NA	NA	FZD1	290542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	90861359	90861732	90861539	Y	NA	FZD1	NA	NA	NA	NA	FZD1	30051	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	92053507	92053858	92053662	Y	NA	GATAD1	GATAD1,ANKIB1	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	GATAD1	20909	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	92271044	92271426	92271360	Y	SAMD9	NA	NA	NA	NA	NA	FAM133B	53336	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	93231275	93231507	93231391	Y	CCDC132	CALCR	NA	NA	NA	NA	CALCR	29233	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	93426376	93426400	93426388	Y	NA	NA	NA	NA	NA	NA	TFPI2	91903	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	94021237	94021945	94021560	Y	NA	NA	NA	NA	NA	NA	COL1A2	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	94140158	94140537	94140353	Y	CASD1	CASD1	NA	NA	NA	NA	CASD1	3627	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	94286949	94287416	94287082	Y	PPP1R9A,PPP1R9A,CASD1,PEG10,PEG10	SGCE,PEG10	NA	NA	NA	NA	PEG10	3312	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	94557636	94557931	94557784	Y	PPP1R9A	PPP1R9A	NA	NA	NA	NA	PPP1R9A	23122	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	95030354	95030375	95030365	Y	NA	PON2	NA	NA	NA	NA	PON2	32135	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	95835254	95835261	95835258	Y	NA	NA	NA	NA	NA	NA	SLC25A13	114198	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	98247636	98247817	98247690	Y	NA	NPTX2	NA	NA	NA	NA	NPTX2	3027	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	98286893	98287005	98286947	Y	NA	NPTX2	NA	NA	NA	NA	NPTX2	42284	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	98557558	98557720	98557639	Y	KPNA7	NA	NA	NA	NA	NA	MIR3609	80285	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	98650927	98651298	98651264	Y	NA	NA	NA	NA	NA	NA	SMURF1	88425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	98809347	98809684	98809536	Y	ZNF655,ZNF655,ZKSCAN5,PTCD1,PDAP1,FAM200A,CPSF4,BUD31,ATP5J2,ARPC1A,SMURF1,KPNA7	NA	SMURF1	IMR90	Hi-C	24141950	SMURF1	69624	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	98973055	98973209	98973129	Y	ZNF655,ZNF655,ZNF394,ARPC1B	ARPC1B,BUD31,PDAP1	NA	NA	NA	NA	ARPC1B	3183	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	98990795	98991133	98991082	Y	NA	ARPC1B,BUD31,PDAP1,CPSF4	NA	NA	NA	NA	BUD31	13131	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	99957855	99958254	99957887	Y	NA	PILRB,PMS2P1	NA	NA	NA	NA	PMS2P1	20324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	99962576	99962959	99962740	Y	MCM7,C7orf43,ZCWPW1,TSC22D4,SLC12A9,MEPCE,LRCH4,GNB2,GIGYF1,PILRB,PILRA	PILRB,PMS2P1	PILRA	IMR90	Hi-C	24141950	PMS2P1	25045	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	99994747	99995042	99994880	Y	ACTL6B,PILRB	MEPCE,ZCWPW1,PPP1R35	NA	NA	NA	NA	MEPCE	29371	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	101526005	101526525	101526438	Y	SH2B2,CUX1,CUX1	NA	NA	NA	NA	NA	CUX1	69046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	101929978	101930313	101930074	Y	CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2	NA	NA	NA	NA	NA	PRKRIP1	72006	CAGE	JHUCS-1	hg19	FANTOM5	2.83293476396744
chr7	101931211	101931437	101931291	Y	CUX1,CUX1,CUX1,ORAI2,SH2B2	NA	NA	NA	NA	NA	PRKRIP1	70882	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	102919685	102919710	102919698	Y	NAPEPLD	DPY19L2P2,PMPCB	NA	NA	NA	NA	DPY19L2P2	828	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	102941984	102942200	102942104	Y	NA	DPY19L2P2,PMPCB,PSMC2,DNAJC2,CTA-276O3.4	NA	NA	NA	NA	PMPCB	6115	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	104460148	104460372	104460286	Y	NA	NA	NA	NA	NA	NA	LINC01004	191119	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	104842983	104843396	104843385	Y	NA	NA	NA	NA	NA	NA	LINC01004	191492	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	104844953	104845066	104844998	Y	NA	NA	NA	NA	NA	NA	SRPK2	192689	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	104960256	104960357	104960307	Y	MLL5,SRPK2	NA	NA	NA	NA	NA	SRPK2	77398	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	104980501	104980737	104980707	Y	NA	NA	NA	NA	NA	NA	SRPK2	57018	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	105223133	105223294	105223281	Y	NA	NA	NA	NA	NA	NA	RINT1	52601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	105447208	105447599	105447347	Y	NA	CTA-351J1.1	NA	NA	NA	NA	CTA-351J1.1	10339	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	105447842	105448108	105447962	Y	NA	CTA-351J1.1	NA	NA	NA	NA	CTA-351J1.1	9830	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	105459888	105460220	105459903	Y	NA	CTA-351J1.1	NA	NA	NA	NA	CTA-351J1.1	1950	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	106007567	106007812	106007694	Y	PIK3CG,FLJ36031,NAMPT	NA	CCDC71L,SYPL1,NAMPT	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NAMPT	82795	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	106209189	106209713	106209400	Y	NAMPT	NA	CCDC71L,NAMPT,ATXN7L1,PIK3CG	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AC004917.1	89629	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	106838325	106838672	106838499	Y	NA	HBP1	NA	NA	NA	NA	HBP1	30919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	107026511	107026865	107026723	Y	NA	NA	NA	NA	NA	NA	DUS4L	175064	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	107562078	107562130	107562088	Y	NA	DLD	NA	NA	NA	NA	DLD	32663	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	107573965	107574445	107574339	Y	LAMB1	DLD	NA	NA	NA	NA	DLD	44550	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	107923246	107923634	107923440	Y	NA	NA	NA	NA	NA	NA	NRCAM	171527	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	107951870	107952225	107952048	Y	PNPLA8	NA	NA	NA	NA	NA	NRCAM	142936	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	107952376	107952906	107952758	Y	NA	NA	NA	NA	NA	NA	NRCAM	142255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	110956734	110956926	110956906	Y	NA	NA	NA	NA	NA	NA	LRRN3	227672	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	111156714	111156954	111156834	Y	NA	IMMP2L	NA	NA	NA	NA	IMMP2L	43619	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	115674649	115674964	115674858	Y	NA	NA	NA	NA	NA	NA	TES	173583	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	116232713	116233127	116232950	Y	NA	NA	MET,TES,CAV2,CAV1,CAPZA2	IMR90,H1ESC,GM12878,K562	Hi-C,5C	24141950,22955621	CAV1	69874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	116793573	116793925	116793605	Y	NA	NA	NA	NA	NA	NA	ST7-AS1	201185	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	116804623	116804954	116804811	Y	NA	NA	NA	NA	NA	NA	ST7-AS1	212235	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	117347608	117347762	117347685	Y	NA	NA	NA	NA	NA	NA	CTTNBP2	164431	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	117863844	117864014	117863854	Y	ANKRD7	NAA38	NA	NA	NA	NA	NAA38	41758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	117953120	117953279	117953191	Y	NA	NA	NA	NA	NA	NA	NAA38	131034	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	120942380	120942663	120942460	Y	NA	WNT16	NA	NA	NA	NA	WNT16	20758	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	121783025	121783385	121783205	Y	PTPRZ1,AASS	AASS	NA	NA	NA	NA	AASS	691	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	121955592	121955853	121955810	Y	NA	FEZF1-AS1,FEZF1	NA	NA	NA	NA	FEZF1	6847	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	123387767	123387941	123387854	Y	NA	WASL	NA	NA	NA	NA	WASL	646	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	123410612	123410856	123410679	Y	NA	WASL	WASL	MCF7,K562	ChIA-PET	22265404	WASL	23491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	127663304	127663714	127663503	Y	IMPDH1,GCC1,LRRC4	LRRC4	NA	NA	NA	NA	LRRC4	6446	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	127807416	127807928	127807646	Y	LRRC4	NA	SND1	IMR90	Hi-C	24141950	LRRC4	137256	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	128170830	128171695	128171212	Y	NA	RP11-212P7.1	IMPDH1,HILPDA,METTL2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-212P7.1	37047	CAGE	JHUCS-1	hg19	FANTOM5	4.33272375665609
chr7	128249599	128249637	128249625	Y	NA	RP11-212P7.1	FLJ45340,CALU,FAM71F1,IRF5	IMR90	Hi-C	24141950	RP11-212P7.1	40857	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	128471531	128472043	128471766	Y	FLNC	CCDC136,FLNC,ATP6V1F	NA	NA	NA	NA	FLNC	3100	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	129419876	129420343	129420085	Y	NA	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	NRF1	170321	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr7	129465628	129465864	129465722	Y	NA	NA	NA	NA	NA	NA	UBE2H	124925	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	129469996	129470292	129470140	Y	NA	NA	NA	NA	NA	NA	UBE2H	120497	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	129508183	129508482	129508331	Y	NA	NA	NA	NA	NA	NA	UBE2H	82307	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	130151792	130152099	130151899	Y	NA	NA	NA	NA	NA	NA	CEP41	71518	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	130589567	130590049	130589961	Y	NA	NA	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MKLN1	202806	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	130593505	130595916	130594870	Y	NA	NA	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MKLN1	196939	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	130633473	130633870	130633858	Y	NA	NA	NA	NA	NA	NA	MKLN1	158985	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	130665753	130666114	130665990	Y	NA	NA	NA	NA	NA	NA	MKLN1	126741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	130697034	130697567	130697379	Y	NA	NA	NA	NA	NA	NA	MKLN1	95288	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	130756735	130757090	130757043	Y	NA	MKLN1,LINC-PINT	NA	NA	NA	NA	MKLN1	35765	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	130910382	130910723	130910553	Y	MKLN1	AC009362.2	NA	NA	NA	NA	AC009362.2	14626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	131105085	131105454	131105312	Y	NA	NA	NA	NA	NA	NA	MKLN1-AS	94104	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	132260559	132260718	132260593	Y	PLXNA4	NA	NA	NA	NA	NA	PLXNA4	70729	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	132488555	132488726	132488642	Y	NA	NA	NA	NA	NA	NA	PLXNA4	157108	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	132656149	132656423	132656408	Y	NA	NA	NA	NA	NA	NA	CHCHD3	108425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	132954358	132954406	132954382	Y	NA	EXOC4,AC083875.2	NA	NA	NA	NA	EXOC4	18529	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	133706471	133706698	133706584	Y	NA	NA	NA	NA	NA	NA	LRGUK	103354	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134117156	134117311	134117298	Y	NA	AKR1B1	NA	NA	NA	NA	AKR1B1	24725	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	134469498	134469802	134469635	Y	CALD1	CALD1	NA	NA	NA	NA	CALD1	42495	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134475089	134475514	134475151	Y	CALD1	CALD1	NA	NA	NA	NA	CALD1	48086	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134498976	134499173	134499074	Y	CALD1	NA	NA	NA	NA	NA	CALD1	71973	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134521262	134521714	134521389	Y	NA	NA	NA	NA	NA	NA	CALD1	94259	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	134798847	134799175	134799011	Y	NA	TMEM140	NA	NA	NA	NA	TMEM140	31649	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134836328	134836759	134836549	Y	WDR91,CNOT4,TMEM140	TMEM140,C7orf49	NA	NA	NA	NA	TMEM140	5504	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134845913	134846266	134846037	Y	WDR91,CNOT4,TMEM140	TMEM140,C7orf49,WDR91	NA	NA	NA	NA	C7orf49	7281	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	134994024	134994387	134994210	Y	NA	NA	NA	NA	NA	NA	WDR91	99708	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	135120473	135120740	135120725	Y	NA	NA	NA	NA	NA	NA	CNOT4	72135	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	137211123	137211422	137211273	Y	DGKI,PTN	NA	NA	NA	NA	NA	PTN	184512	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	137346296	137346315	137346306	Y	PTN	NA	NA	NA	NA	NA	DGKI	183523	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	137673807	137674359	137674139	Y	NA	CREB3L2	NA	NA	NA	NA	CREB3L2	10454	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	138630696	138630809	138630753	Y	TRIM24,SVOPL,UBN2,LUC7L2,KIAA1549	KIAA1549	NA	NA	NA	NA	KIAA1549	33255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	139367600	139367827	139367677	Y	TBXAS1	NA	NA	NA	NA	NA	HIPK2	107750	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	139431881	139432226	139432135	Y	TBXAS1,JHDM1D,HIPK2	HIPK2	NA	NA	NA	NA	HIPK2	43351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	139930863	139931473	139931211	Y	TBXAS1,JHDM1D	NA	LOC100134229,JHDM1D	MCF7	ChIA-PET	22265404	PARP12	169342	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	140572858	140572991	140572984	Y	BRAF	BRAF	NA	NA	NA	NA	BRAF	49573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	140613036	140613224	140613135	Y	NA	BRAF	NA	NA	NA	NA	BRAF	9340	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	140774728	140775101	140774915	Y	NA	RNU4-74P	NA	NA	NA	NA	RNU4-74P	24679	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	140776370	140776415	140776407	Y	LOC100131199	RNU4-74P	NA	NA	NA	NA	RNU4-74P	26321	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	140880261	140880624	140880319	Y	LOC100131199	NA	NA	NA	NA	NA	RNU4-74P	130212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	140885436	140885795	140885618	Y	NA	NA	NA	NA	NA	NA	RNU4-74P	135387	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	141016311	141016374	141016343	Y	TAS2R3,WEE2	NA	NA	NA	NA	NA	AGK	232615	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	141285767	141286195	141285861	Y	TAS2R38,AGK	AGK	NA	NA	NA	NA	AGK	36778	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	141492164	141492415	141492290	Y	TAS2R38,OR9A4,TAS2R3,TAS2R4,TAS2R5	NA	NA	NA	NA	NA	SSBP1	56043	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	143083267	143084129	143083354	Y	TAS2R40,FAM131B,FAM131B	FAM131B,ZYX	NA	NA	NA	NA	ZYX	7094	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr7	145847092	145847701	145847439	Y	CNTNAP2	CNTNAP2	NA	NA	NA	NA	CNTNAP2	35639	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	145860816	145861156	145860986	Y	CNTNAP2	CNTNAP2	NA	NA	NA	NA	CNTNAP2	49363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	145925339	145925571	145925397	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	113886	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr7	145932628	145933064	145932806	Y	CNTNAP2	NA	NA	NA	NA	NA	CNTNAP2	121175	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	145933200	145933594	145933373	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	121747	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr7	145940282	145940834	145940467	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	128829	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr7	145943025	145943194	145943108	Y	CNTNAP2	NA	NA	NA	NA	NA	CNTNAP2	131572	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	145946351	145946582	145946467	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	134898	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	145973417	145973757	145973587	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	161964	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	145974420	145974737	145974579	Y	CNTNAP2	NA	NA	NA	NA	NA	CNTNAP2	162967	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	145996406	145996791	145996515	Y	CNTNAP2	NA	NA	NA	NA	NA	CNTNAP2	184953	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	146054322	146054858	146054524	Y	CNTNAP2	NA	NA	NA	NA	NA	CNTNAP2	242869	CAGE	JHUCS-1	hg19	FANTOM5	2.83293476396744
chr7	146086153	146086538	146086171	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	274700	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr7	146189423	146189726	146189575	Y	CNTNAP2	NA	NA	NA	NA	NA	CNTNAP2	377970	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	146230197	146230393	146230208	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	418744	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	146343004	146343369	146343187	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	531551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	146553535	146553793	146553664	Y	NA	NA	NA	NA	NA	NA	CNTNAP2	742082	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	148027495	148027904	148027865	Y	NA	NA	NA	NA	NA	NA	AC005229.5	247589	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr7	148424586	148424815	148424779	Y	NA	CUL1	NA	NA	NA	NA	CUL1	31580	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	148638273	148638633	148638462	Y	NA	RNY5	EZH2,ZNF786,ZNF398,ZNF425,CUL1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RNY5	1693	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr7	148684338	148684706	148684475	Y	NA	RNY5,PDIA4	NA	NA	NA	NA	PDIA4	39027	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	148788414	148788490	148788418	Y	CUL1,ZNF786,ZNF425,ZNF398	ZNF786,ZNF425,ZNF398	NA	NA	NA	NA	ZNF786	2540	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	148788628	148788884	148788863	Y	ZNF783,CUL1,EZH2,ZNF786,ZNF398	ZNF786,ZNF425,ZNF398	NA	NA	NA	NA	ZNF786	2754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	149280287	149280529	149280408	Y	NA	ZNF767	NA	NA	NA	NA	ZNF767	39314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	149468740	149469267	149468803	Y	NA	ZNF467	NA	NA	NA	NA	ZNF467	172	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	149745351	149745623	149745500	Y	NA	NA	NA	NA	NA	NA	ATP6V0E2-AS1	169652	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr7	151157060	151157432	151157203	Y	NA	NA	CRYGN	IMR90	Hi-C	24141950	WDR86	51247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	151184518	151184840	151184768	Y	NA	RHEB	NA	NA	NA	NA	RHEB	30366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	151193551	151193826	151193799	Y	NA	RHEB	NA	NA	NA	NA	RHEB	21380	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	151198552	151198933	151198803	Y	AGAP3,PRKAG2,PRKAG2	RHEB	CRYGN	IMR90	Hi-C	24141950	RHEB	16273	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	151502324	151502720	151502638	Y	NA	NA	NA	NA	NA	NA	PRKAG2-AS1	69407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	151806252	151806472	151806362	Y	NA	NA	NA	NA	NA	NA	GALNT11	85493	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	152105895	152106094	152106005	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	25886	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	152111667	152111916	152111792	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	20064	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	152123020	152123275	152123182	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	8705	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	152160343	152160554	152160402	Y	ACTR3B	FABP5P3	NA	NA	NA	NA	FABP5P3	28363	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	152160715	152161193	152160959	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	28735	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr7	152161348	152162014	152161594	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	29368	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr7	152338571	152338711	152338613	Y	NA	XRCC2	NA	NA	NA	NA	XRCC2	32539	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	152670161	152670279	152670220	Y	ACTR3B	NA	NA	NA	NA	NA	ACTR3B	215327	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	154742897	154743129	154742996	Y	NA	PAXIP1	NA	NA	NA	NA	PAXIP1	49665	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	155580383	155580450	155580415	Y	NA	NA	NA	NA	NA	NA	AC009403.2	144484	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	156544134	156544345	156544262	Y	NA	NA	NA	NA	NA	NA	C7orf13	112786	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	156800292	156800601	156800569	Y	MNX1,MNX1	MNX1	NA	NA	NA	NA	MNX1	744	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr7	156932490	156932855	156932681	Y	NA	UBE3C	NA	NA	NA	NA	UBE3C	2883	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157034052	157034373	157034213	Y	NA	NA	NA	NA	NA	NA	RP4-814D15.2	50990	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157070019	157070314	157070105	Y	NA	NA	NA	NA	NA	NA	DNAJB6	55761	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157131379	157131690	157131421	Y	NA	DNAJB6	NA	NA	NA	NA	DNAJB6	5304	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157366883	157367406	157367099	Y	NA	NA	NA	NA	NA	NA	DNAJB6	240808	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr7	157809172	157809538	157809355	Y	NA	NA	NA	NA	NA	NA	DNAJB6	683097	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157885320	157885690	157885593	Y	PTPRN2	NA	NA	NA	NA	NA	NCAPG2	609830	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157924006	157924393	157924072	Y	PTPRN2	NA	NA	NA	NA	NA	NCAPG2	571127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	157943729	157944143	157943925	Y	NA	NA	NA	NA	NA	NA	NCAPG2	551377	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	158110398	158110735	158110581	Y	NA	NA	NA	NA	NA	NA	NCAPG2	384785	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	158410794	158411171	158410984	Y	NA	NA	NA	NA	NA	NA	NCAPG2	84349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	158452829	158453067	158452948	Y	NA	NCAPG2	NA	NA	NA	NA	NCAPG2	42453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	158500449	158500649	158500582	Y	NA	NCAPG2	NA	NA	NA	NA	NCAPG2	4929	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	158603982	158604371	158604316	Y	NA	ESYT2,WDR60	NA	NA	NA	NA	ESYT2	16573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr7	158808159	158808606	158808258	Y	VIPR2	NA	NA	NA	NA	NA	WDR60	160890	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	637812	637858	637835	Y	NA	ERICH1	NA	NA	NA	NA	ERICH1	48248	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	638062	638589	638348	Y	ZNF596,ZNF596,ERICH1	ERICH1	NA	NA	NA	NA	ERICH1	47517	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	1452379	1452383	1452381	Y	KBTBD11	NA	NA	NA	NA	NA	CLN8	249561	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	1736486	1736690	1736554	Y	NA	CLN8,CTD-2336O2.1,ARHGEF10	NA	NA	NA	NA	CTD-2336O2.1	25818	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	1780723	1781665	1781560	Y	NA	ARHGEF10	NA	NA	NA	NA	ARHGEF10	10581	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr8	1897074	1897760	1897667	Y	NA	KBTBD11-OT1,KBTBD11,RP11-439C15.4	NA	NA	NA	NA	KBTBD11-OT1	19803	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr8	4259376	4259502	4259437	Y	NA	NA	NA	NA	NA	NA	PAICSP4	383352	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	6275449	6275723	6275483	Y	NA	MCPH1	NA	NA	NA	NA	MCPH1	13336	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	6323096	6323426	6323195	Y	NA	NA	NA	NA	NA	NA	MCPH1	60983	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	8203793	8204189	8204138	Y	NA	SGK223	NA	NA	NA	NA	SGK223	37819	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	8742026	8742246	8742225	Y	NA	MFHAS1	NA	NA	NA	NA	MFHAS1	6909	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	8746516	8746997	8746809	Y	CLDN23	MFHAS1	NA	NA	NA	NA	MFHAS1	2158	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	8878847	8879137	8878870	Y	NA	ERI1	NA	NA	NA	NA	ERI1	21190	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	9121825	9122193	9121953	Y	NA	NA	NA	NA	NA	NA	PPP1R3B	114741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	9764051	9764441	9764391	Y	MSRA	LINC00599	NA	NA	NA	NA	LINC00599	3175	CAGE	JHUCS-1	hg19	FANTOM5	4.99929664229549
chr8	9764585	9764997	9764871	Y	MSRA	LINC00599	NA	NA	NA	NA	LINC00599	3709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	9774400	9774769	9774721	Y	TNKS,MSRA	LINC00599	NA	NA	NA	NA	LINC00599	13524	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	9791185	9791439	9791249	Y	MSRA	LINC00599	LOC157627,MSRA	IMR90	Hi-C	24141950	LINC00599	30309	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	9912937	9913246	9913138	Y	NA	MSRA	NA	NA	NA	NA	MSRA	3159	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	10001455	10001759	10001620	Y	MSRA	NA	NA	NA	NA	NA	MSRA	91677	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	10079596	10079605	10079601	Y	MSRA	NA	NA	NA	NA	NA	MSRA	169818	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	10187572	10187859	10187580	Y	NA	NA	NA	NA	NA	NA	MSRA	277794	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	10192260	10192787	10192448	Y	MSRA	NA	NA	NA	NA	NA	MSRA	282482	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr8	10193189	10193473	10193425	Y	MSRA	NA	NA	NA	NA	NA	MSRA	283411	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	10676875	10677241	10677058	Y	NA	PINX1	NA	NA	NA	NA	PINX1	18153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	11013396	11013600	11013498	Y	NA	NA	NA	NA	NA	NA	MTMR9	126325	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	11032163	11032532	11032339	Y	NA	NA	NA	NA	NA	NA	MTMR9	107393	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	11312887	11313950	11313920	Y	NA	FAM167A	NA	NA	NA	NA	FAM167A	16274	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr8	11314255	11315026	11314813	Y	XKR6,MTMR9,FAM167A	FAM167A	NA	NA	NA	NA	FAM167A	15198	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	11690057	11690160	11690110	Y	NA	SUB1P1,FDFT1,RP11-297N6.4,CTSB	NA	NA	NA	NA	RP11-297N6.4	31980	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	12728574	12728753	12728653	Y	KIAA1456	NA	KIAA1456	IMR90	Hi-C	24141950	KIAA1456	72398	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	12823567	12823804	12823686	Y	LONRF1,KIAA1456	KIAA1456	NA	NA	NA	NA	KIAA1456	22416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	12856860	12857232	12856871	Y	LONRF1,KIAA1456	NA	NA	NA	NA	NA	KIAA1456	55709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	13393176	13393534	13393351	Y	DLC1	DLC1	DLC1	IMR90	Hi-C	24141950	DLC1	22009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	15546823	15547116	15546970	Y	NA	NA	NA	NA	NA	NA	TUSC3	274099	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	16185668	16185862	16185777	Y	MSR1	NA	NA	NA	NA	NA	ZDHHC2	825676	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	16489924	16490119	16489983	Y	MSR1	NA	NA	NA	NA	NA	ZDHHC2	521419	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	17165650	17166030	17165840	Y	PDGFRL	NA	NA	NA	NA	NA	CNOT7	63263	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	18722659	18722821	18722740	Y	PSD3	NA	NA	NA	NA	NA	PSD3	217419	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	19266409	19266742	19266623	Y	CSGALNACT1	NA	NA	NA	NA	NA	SH2D4A	97281	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	19533548	19533780	19533688	Y	CSGALNACT1	NA	NA	NA	NA	NA	CSGALNACT1	79760	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	21027025	21027231	21027110	Y	NA	NA	NA	NA	NA	NA	GFRA2	640638	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	21624397	21624558	21624547	Y	NPM2,GFRA2	GFRA2	NA	NA	NA	NA	GFRA2	43311	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	21775759	21776194	21775973	Y	PHYHIP,DOK2,NPM2	XPO7	NA	NA	NA	NA	XPO7	579	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	21867707	21867918	21867811	Y	PHYHIP,LGI3,EPB49,EPB49,NPM2	NPM2	NA	NA	NA	NA	NPM2	11718	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	22300361	22300587	22300487	Y	BIN3,PPP3CC	PPP3CC,RP11-382J24.2	NA	NA	NA	NA	PPP3CC	4029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	22306621	22306908	22306765	Y	NPM2,PPP3CC	PPP3CC,RP11-382J24.2	NA	NA	NA	NA	PPP3CC	10289	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	22408271	22408447	22408337	Y	NA	SORBS3,PDLIM2,C8orf58	NA	NA	NA	NA	SORBS3	7772	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	22522684	22522941	22522886	Y	NA	BIN3,EGR3	NA	NA	NA	NA	BIN3	1720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	23016406	23016568	23016458	Y	ENTPD4,ENTPD4,BIN3,TNFRSF10C	TNFRSF10D	NA	NA	NA	NA	TNFRSF10D	2975	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	23308133	23308499	23308237	Y	TNFRSF10C,ENTPD4,ENTPD4	LOXL2,ENTPD4	NA	NA	NA	NA	ENTPD4	4709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	24134954	24135036	24134995	Y	NA	NA	ADAM28	IMR90	Hi-C	24141950	RNU1-148P	202283	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	24206605	24207043	24206844	Y	ADAM28,ADAMDEC1	NA	NA	NA	NA	NA	RNU1-148P	273934	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	24858208	24858485	24858356	Y	NA	NA	NA	NA	NA	NA	DOCK5	181753	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	25348135	25348483	25348309	Y	CDCA2	KCTD9,CDCA2	NA	NA	NA	NA	CDCA2	33622	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	25904215	25904335	25904275	Y	NA	EBF2	NA	NA	NA	NA	EBF2	3302	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	26305968	26306033	26305997	Y	NA	NA	BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PNMA2	63575	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	26429509	26429959	26429867	Y	NA	NA	NA	NA	NA	NA	DPYSL2	59718	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr8	26433425	26433611	26433473	Y	NA	NA	NA	NA	NA	NA	DPYSL2	63634	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	28263906	28264152	28263987	Y	HMBOX1,HMBOX1,ZNF395	ZNF395	ZNF395	IMR90	Hi-C	24141950	ZNF395	5688	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	28269273	28269920	28269515	Y	ZNF395	ZNF395	NA	NA	NA	NA	ZNF395	11055	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr8	28569820	28569970	28569874	Y	ZNF395,FZD3,EXTL3	EXTL3-AS1	NA	NA	NA	NA	EXTL3-AS1	12839	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	29267244	29267441	29267354	Y	KIF13B	NA	C8orf75,DUSP4,LOC286135,MIR3148,TMEM66,MIR548O2,LEPROTL1	IMR90	Hi-C	24141950	DUSP4	61059	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	29631647	29631969	29631808	Y	NA	NA	C8orf75,LOC286135	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TMEM66	306754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	29946002	29946367	29946215	Y	TMEM66,LEPROTL1	TMEM66,LEPROTL1,RPS15AP24	NA	NA	NA	NA	LEPROTL1	4547	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	30015593	30015700	30015665	Y	NA	RPS15AP24,DCTN6	NA	NA	NA	NA	DCTN6	3780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	33171315	33171414	33171365	Y	NA	NA	NRG1	IMR90	Hi-C	24141950	FUT10	157526	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	33579772	33580017	33579844	Y	NA	NA	NA	NA	NA	NA	DUSP26	124148	CAGE	JHUCS-1	hg19	FANTOM5	6.16579919216444
chr8	33668021	33668356	33668148	Y	NA	RP1-273G13.1	NA	NA	NA	NA	RP1-273G13.1	47385	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	33718252	33718557	33718395	Y	NA	RP1-273G13.1	NA	NA	NA	NA	RP1-273G13.1	2511	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	34078648	34078885	34078767	Y	NA	NA	NA	NA	NA	NA	RP1-84O15.1	100275	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	35238175	35238554	35238365	Y	UNC5D	NA	NA	NA	NA	NA	LSM12P1	142727	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	35382808	35383133	35382968	Y	NA	LSM12P1	NA	NA	NA	NA	LSM12P1	1527	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr8	37000181	37000618	37000483	Y	NA	NA	KCNU1,PROSC,ZNF703,ERLIN2,LOC728024,GPR124	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF703	550651	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	37749222	37749683	37749580	Y	WHSC1L1,LETM2,LETM2,RAB11FIP1	BRF2,RAB11FIP1	NA	NA	NA	NA	RAB11FIP1	5302	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	37961561	37961954	37961758	Y	NA	ASH2L	NA	NA	NA	NA	ASH2L	801	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	38035023	38035257	38035173	Y	WHSC1L1,LETM2,LETM2,BAG4	BAG4,LSM1,DDHD2	NA	NA	NA	NA	LSM1	2775	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	38219963	38220671	38220346	Y	WHSC1L1,LETM2,LETM2	WHSC1L1,LETM2	DDHD2,PPAPDC1B	IMR90	Hi-C	24141950	WHSC1L1	17119	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	38262735	38263237	38262894	Y	TACC1,PLEKHA2,C8orf86	WHSC1L1,LETM2	NA	NA	NA	NA	LETM2	21010	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	38312135	38312514	38312441	Y	NA	FGFR1	NA	NA	NA	NA	FGFR1	11838	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	38313401	38313535	38313485	Y	NA	FGFR1	NA	NA	NA	NA	FGFR1	10817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	38491506	38491745	38491628	Y	FGFR1	RNF5P1	FGFR1,C8orf86,LETM2,WHSC1L1,PPAPDC1B,RNF5P1	IMR90	Hi-C	24141950	RNF5P1	34788	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	38627692	38628125	38628027	Y	LETM2,LETM2,C8orf86,PLEKHA2,TACC1	TACC1	NA	NA	NA	NA	TACC1	43988	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	38628365	38628436	38628401	Y	TACC1	TACC1	NA	NA	NA	NA	TACC1	44661	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	40049035	40049230	40049136	Y	NA	NA	GOLGA7,C8orf4,ZMAT4	IMR90	Hi-C	24141950	ZMAT4	704122	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	41570603	41570760	41570682	Y	NA	NA	NA	NA	NA	NA	RP11-360L9.4	136716	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	41649689	41649828	41649744	Y	NKX6-3	NA	NA	NA	NA	NA	RP11-360L9.4	215802	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	41908079	41908836	41908505	Y	POLB,IKBKB,IKBKB,AP3M2,AGPAT6,MYST3	KAT6A	NA	NA	NA	NA	KAT6A	571	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	42588467	42588706	42588587	Y	NA	NA	NA	NA	NA	NA	THAP1	107762	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48242793	48242802	48242797	Y	NA	NA	PRKDC	IMR90	Hi-C	24141950	NDUFA5P12	168300	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	48265617	48265884	48265750	Y	CEBPD	NA	NA	NA	NA	NA	NDUFA5P12	191124	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48265920	48266584	48265994	Y	NA	NA	NA	NA	NA	NA	NDUFA5P12	191427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48294076	48294490	48294332	Y	NA	NA	NA	NA	NA	NA	RP11-697N18.2	208681	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48311654	48311845	48311740	Y	CEBPD	NA	NA	NA	NA	NA	RP11-697N18.2	191326	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	48350721	48350922	48350822	Y	NA	NA	NA	NA	NA	NA	RP11-697N18.2	152249	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48434780	48435210	48435108	Y	CEBPD	NA	NA	NA	NA	NA	RP11-697N18.2	67961	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48486280	48486631	48486481	Y	NA	RP11-697N18.2	NA	NA	NA	NA	RP11-697N18.2	16540	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48580617	48580970	48580793	Y	NA	NA	NA	NA	NA	NA	CEBPD	68678	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48581816	48581989	48581954	Y	CEBPD	NA	NA	NA	NA	NA	CEBPD	67659	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	48903451	48903743	48903597	Y	NA	PRKDC,MCM4,UBE2V2	NA	NA	NA	NA	UBE2V2	15217	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	49426952	49427328	49427172	Y	SNAI2	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	131802	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	49427546	49427722	49427633	Y	SNAI2	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	132396	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	49430601	49430974	49430806	Y	NA	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	135451	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	49467466	49467648	49467542	Y	SNAI2	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	172316	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	49494192	49494425	49494282	Y	NA	NA	SNAI2,EFCAB1	IMR90	Hi-C	24141950	EFCAB1	151445	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	52809491	52809887	52809877	Y	PCMTD1	NA	NA	NA	NA	NA	PCMTD1,RP11-110G21.1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	53625473	53626379	53625848	Y	RB1CC1	RB1CC1	NA	NA	NA	NA	RB1CC1	30024	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	54798731	54798762	54798749	Y	NA	ATP6V1H	NA	NA	NA	NA	ATP6V1H	44613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	54884977	54885679	54885327	Y	NA	TCEA1	NA	NA	NA	NA	TCEA1	47410	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	54932125	54932445	54932251	Y	NA	TCEA1	NA	NA	NA	NA	TCEA1	644	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr8	56068878	56069211	56068948	Y	XKR4	NA	NA	NA	NA	NA	XKR4	55929	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	56342291	56342398	56342345	Y	NA	NA	NA	NA	NA	NA	XKR4	329342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	56354040	56354307	56354063	Y	XKR4	NA	NA	NA	NA	NA	TGS1	329394	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	56842990	56843446	56843124	Y	LYN	NA	NA	NA	NA	NA	LYN	52618	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	56876027	56876489	56876217	Y	LYN	NA	NA	NA	NA	NA	LYN	85655	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	56904632	56904847	56904684	Y	LYN	NA	NA	NA	NA	NA	SNORD54	79613	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	59499727	59499886	59499762	Y	UBXN2B,NSMAF,NSMAF,SDCBP	SDCBP	NA	NA	NA	NA	SDCBP	36244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	59821707	59822062	59821885	Y	NA	NA	NA	NA	NA	NA	RNU4-50P	96596	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	59971267	59971652	59971580	Y	NA	NA	NA	NA	NA	NA	RP11-25K19.1	57947	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	61511489	61511770	61511631	Y	NA	NA	NA	NA	NA	NA	CHD7	77567	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	61564243	61564650	61564285	Y	CA8,CHD7	CHD7	CHD7,RAB2A	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHD7	24687	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	61592861	61593584	61592948	Y	NA	CHD7	NA	NA	NA	NA	CHD7	3524	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	61850490	61850754	61850677	Y	NA	NA	CHD7	IMR90	Hi-C	24141950	CLVS1	116963	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	61850776	61851191	61851141	Y	NA	NA	CHD7	IMR90	Hi-C	24141950	CLVS1	116526	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	62445230	62445580	62445420	Y	CLVS1,ASPH	NA	NA	NA	NA	NA	ASPH	179575	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	62566892	62567143	62567071	Y	NA	NA	NA	NA	NA	NA	ASPH	58012	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	62606389	62606706	62606619	Y	NA	ASPH,MIR4470	NA	NA	NA	NA	ASPH	18449	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	62620817	62621622	62621526	Y	NA	ASPH,MIR4470	NA	NA	NA	NA	ASPH	3533	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	63602684	63603084	63602782	Y	NA	NA	NA	NA	NA	NA	GGH	346646	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	63776641	63776831	63776733	Y	NA	NA	NA	NA	NA	NA	GGH	172899	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	66641187	66641625	66641410	Y	PDE7A	NA	NA	NA	NA	NA	MTFR1	86218	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr8	66652181	66652518	66652302	Y	NA	NA	NA	NA	NA	NA	MTFR1	97212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	67424340	67424761	67424541	Y	C8orf45	NA	NA	NA	NA	NA	RRS1	85077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	67522221	67522599	67522407	Y	ADHFE1,VCPIP1,MYBL1	MYBL1	NA	NA	NA	NA	MYBL1	1883	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	68098646	68098899	68098873	Y	NA	NA	NA	NA	NA	NA	COPS5	104628	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	68105132	68105308	68105276	Y	NA	NA	NA	NA	NA	NA	COPS5	111114	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	70042378	70042779	70042585	Y	NA	NA	NA	NA	NA	NA	SULF1	334080	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	71124105	71124438	71124275	Y	NA	NA	NA	NA	NA	NA	RNU1-101P	135838	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	71149519	71149670	71149631	Y	NA	NA	NA	NA	NA	NA	RNU1-101P	161252	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	71303418	71303670	71303544	Y	NA	NCOA2,RP11-333A23.1	NA	NA	NA	NA	NCOA2	10370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	72770493	72770720	72770591	Y	MSC	RP11-383H13.1,MSC	NA	NA	NA	NA	MSC	15790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	73481000	73481171	73481085	Y	KCNB2	KCNB2	NA	NA	NA	NA	KCNB2	33374	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	73733862	73734193	73733971	Y	KCNB2	NA	NA	NA	NA	NA	TERF1	184906	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	74625237	74625516	74625377	Y	NA	STAU2	NA	NA	NA	NA	STAU2	32427	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	75515244	75515546	75515314	Y	NA	RP11-730G20.2	NA	NA	NA	NA	RP11-730G20.2	765	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	75576382	75576715	75576543	Y	NA	NA	NA	NA	NA	NA	RP11-730G20.2	61903	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	77590079	77590470	77590424	Y	ZFHX4	ZFHX4	NA	NA	NA	NA	ZFHX4	984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	77731385	77731402	77731393	Y	ZFHX4	NA	NA	NA	NA	NA	ZFHX4	139931	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	79675234	79675631	79675433	Y	NA	IL7	NA	NA	NA	NA	IL7	40127	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	80696342	80696550	80696513	Y	HEY1	HEY1	MRPS28,HEY1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HEY1	18244	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	80701258	80701483	80701350	Y	HEY1	HEY1	HEY1,MRPS28	IMR90	Hi-C	24141950	HEY1	23160	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	81615108	81615487	81615408	Y	ZNF704	NA	NA	NA	NA	NA	ZBTB10	219254	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	81639602	81640013	81639931	Y	ZNF704	NA	NA	NA	NA	NA	ZBTB10	243748	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	81695028	81695405	81695288	Y	NA	NA	NA	NA	NA	NA	ZBTB10	299174	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr8	81742521	81742946	81742703	Y	NA	NA	NA	NA	NA	NA	PAG1	279357	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	81782792	81783006	81782996	Y	ZBTB10,ZNF704	NA	NA	NA	NA	NA	PAG1	239297	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	81893837	81894122	81894063	Y	PAG1	NA	NA	NA	NA	NA	PAG1	128181	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	81938706	81938999	81938911	Y	PAG1	NA	NA	NA	NA	NA	PAG1	83304	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	82019096	82019493	82019305	Y	PAG1	PAG1	NA	NA	NA	NA	PAG1	2810	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	82167350	82167604	82167486	Y	NA	FABP5,RP11-363E6.3	ZNF704,PAG1,FABP12	IMR90	Hi-C	24141950	FABP5	22994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	85472216	85472229	85472220	Y	NA	NA	NA	NA	NA	NA	RALYL	379194	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	87484005	87484360	87484214	Y	NA	CPNE3,SLC2A3P4	NA	NA	NA	NA	CPNE3	10699	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	89124026	89124433	89124347	Y	MMP16	NA	NA	NA	NA	NA	MMP16	213821	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	90213226	90213534	90213296	Y	NA	NA	NA	NA	NA	NA	RP11-37B2.1	554421	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	90838382	90838725	90838688	Y	RIPK2,OSGIN2	NA	OSGIN2	MCF7	ChIA-PET	22265404	RIPK2	70407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	91020764	91021152	91020912	Y	NA	DECR1,NBN	NA	NA	NA	NA	NBN	7308	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	91705068	91705420	91705305	Y	NA	NA	TMEM64	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NECAB1	96358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	92337525	92337634	92337580	Y	NA	NA	NA	NA	NA	NA	OTUD6B	257101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	94592602	94592618	94592610	Y	NA	NA	NA	NA	NA	NA	FAM92A1	116171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	94728357	94728657	94728477	Y	NA	FAM92A1,LINC00535,RBM12B,TMEM67	NA	NA	NA	NA	LINC00535	17696	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	95786265	95786660	95786406	Y	RAD54B,KIAA1429	INTS8	NA	NA	NA	NA	INTS8	36879	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	95896385	95896691	95896542	Y	NA	CCNE2	NA	NA	NA	NA	CCNE2	10215	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	95943173	95943450	95943312	Y	NA	CCNE2,TP53INP1,RP11-347C18.3	NA	NA	NA	NA	TP53INP1	16189	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	95974189	95974483	95974287	Y	TP53INP1	TP53INP1,RP11-347C18.3	C8orf69	IMR90	Hi-C	24141950	RP11-347C18.3	13924	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	96146998	96147210	96147103	Y	TP53INP1,PLEKHF2	PLEKHF2	NA	NA	NA	NA	PLEKHF2	2966	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	97319675	97319761	97319753	Y	NA	MTERFD1,PTDSS1	NA	NA	NA	NA	PTDSS1	47732	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	97779129	97779296	97779215	Y	PGCP	NA	NA	NA	NA	NA	SDC2	275550	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	97919369	97919918	97919418	Y	PGCP	NA	NA	NA	NA	NA	SDC2	415790	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	97934277	97934647	97934426	Y	PGCP	NA	NA	NA	NA	NA	SDC2	430698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	97939074	97939597	97939456	Y	NA	NA	NA	NA	NA	NA	SDC2	435495	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	98843281	98843693	98843349	Y	POP1	RPS23P1,MATN2	NA	NA	NA	NA	RPS23P1	31589	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	98843865	98843962	98843914	Y	NA	RPS23P1,MATN2	NA	NA	NA	NA	RPS23P1	31320	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	99637150	99637421	99637401	Y	NA	NA	NA	NA	NA	NA	KCNS2	199900	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	99953302	99954000	99953407	Y	STK3,OSR2	STK3,OSR2	NA	NA	NA	NA	STK3	247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	100461450	100461455	100461453	Y	NA	NA	NA	NA	NA	NA	VPS13B	437956	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	101731045	101731633	101731441	Y	NA	PABPC1	NA	NA	NA	NA	PABPC1	1404	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	101912406	101912993	101912785	Y	PABPC1,ZNF706,ZNF706,YWHAZ,YWHAZ	RPS26P6	NA	NA	NA	NA	RPS26P6	6432	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	101920723	101921107	101920870	Y	NA	RPS26P6,YWHAZ	NA	NA	NA	NA	RPS26P6	14749	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr8	102110720	102110996	102110973	Y	PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706	NA	FLJ42969	MCF7	ChIA-PET	22265404	ZNF706	105425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	102185716	102186115	102186035	Y	NA	ZNF706	YWHAZ,FLJ42969,ZNF706	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF706	30306	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	102665065	102665479	102665281	Y	NA	NA	NA	NA	NA	NA	NACAP1	293043	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	103401606	103401938	103401841	Y	NA	UBR5	NA	NA	NA	NA	UBR5	21131	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	103422542	103423104	103422992	Y	NA	NA	NA	NA	NA	NA	UBR5	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	103613012	103613469	103613324	Y	KLF10,KLF10	NA	UBR5,KLF10,ODF1,AZIN1,RRM2B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF10	52661	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	104059632	104059708	104059689	Y	NA	ATP6V1C1,KB-1639H6.2	NA	NA	NA	NA	KB-1639H6.2	27976	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	104305857	104306236	104306047	Y	NA	FZD6,RP11-318M2.2	NA	NA	NA	NA	FZD6	2425	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	104308052	104308138	104308090	Y	NA	FZD6,RP11-318M2.2	NA	NA	NA	NA	FZD6	523	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	104331705	104332089	104331783	Y	RIMS2	FZD6,RP11-318M2.2,CTHRC1	NA	NA	NA	NA	RP11-318M2.2	22705	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	104553511	104553813	104553575	Y	NA	RIMS2,RP11-1C8.4,RP11-5A11.1	NA	NA	NA	NA	RP11-5A11.1	15804	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	105598029	105598284	105598149	Y	TM7SF4,LRP12	LRP12	NA	NA	NA	NA	LRP12	968	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	106411260	106411358	106411309	Y	NA	NA	NA	NA	NA	NA	ZFPM2	82340	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	106444510	106444790	106444650	Y	NA	NA	NA	NA	NA	NA	ZFPM2	115590	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	106582164	106582354	106582260	Y	NA	NA	NA	NA	NA	NA	ZFPM2	253244	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	107740443	107740789	107740616	Y	NA	TAGLN2P1	NA	NA	NA	NA	TAGLN2P1	32202	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	108280393	108280499	108280446	Y	NA	NA	NA	NA	NA	NA	ANGPT1	227784	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	109230729	109230920	109230833	Y	NA	NA	NA	NA	NA	NA	EIF3E	214642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	110288477	110288741	110288621	Y	NA	NA	NA	NA	NA	NA	ENY2	55812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	110589431	110589605	110589518	Y	NA	EBAG9	NA	NA	NA	NA	EBAG9	39491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	110602225	110602239	110602235	Y	SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,KCNV1	NA	NA	NA	NA	NA	EBAG9	52285	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr8	110647152	110647483	110647459	Y	NA	NA	NA	NA	NA	NA	SYBU	54537	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	113119329	113119491	113119407	Y	NA	NA	NA	NA	NA	NA	RP11-709P2.1	1267407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	113425784	113426043	113425914	Y	NA	NA	NA	NA	NA	NA	RP11-709P2.1	960855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	113791450	113791716	113791698	Y	NA	NA	NA	NA	NA	NA	RP11-709P2.1	595182	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	114266349	114266595	114266472	Y	NA	NA	NA	NA	NA	NA	RP11-709P2.1	120303	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	114422111	114422275	114422193	Y	CSMD3	RP11-709P2.1,CSMD3	NA	NA	NA	NA	CSMD3	25053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	114446334	114446522	114446428	Y	NA	CSMD3	NA	NA	NA	NA	CSMD3	806	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	116067507	116067816	116067663	Y	NA	NA	NA	NA	NA	NA	TRPS1	752083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	116441706	116441935	116441732	Y	TRPS1	NA	NA	NA	NA	NA	TRPS1	377964	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr8	116641527	116641923	116641875	Y	NA	NA	NA	NA	NA	NA	TRPS1	177976	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	116678291	116678885	116678654	Y	TRPS1	NA	NA	NA	NA	NA	TRPS1	141014	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	116695168	116695449	116695309	Y	NA	NA	EIF3H	IMR90	Hi-C	24141950	TRPS1	124450	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	116858854	116859170	116859022	Y	TRPS1	TRPS1	NA	NA	NA	NA	TRPS1	38955	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	117883999	117884137	117884073	Y	UTP23,RAD21	MIR3610,RAD21	NA	NA	NA	NA	MIR3610	902	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	118969079	118969407	118969255	Y	MED30	NA	NA	NA	NA	NA	EXT1	152685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	119047899	119048328	119048216	Y	NA	NA	NA	NA	NA	NA	EXT1	73764	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr8	119189481	119189499	119189490	Y	NA	NA	NA	NA	NA	NA	EXT1	67389	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	119443463	119443781	119443622	Y	NA	NA	NA	NA	NA	NA	SAMD12	188453	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	119781554	119781682	119781618	Y	NA	RPS26P35	TNFRSF11B	IMR90	Hi-C	24141950	RPS26P35	9114	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	121939165	121939179	121939172	Y	NA	NA	SNTB1,MTBP,MRPL13	IMR90	Hi-C	24141950	SNTB1	115652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	123811167	123811696	123811506	Y	C8orf76,ZHX2	ZHX2	NA	NA	NA	NA	ZHX2	19534	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124050911	124051177	124051044	Y	NA	DERL1	NA	NA	NA	NA	DERL1	1486	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124248679	124249062	124248866	Y	NA	C8orf76,ZHX1	NA	NA	NA	NA	C8orf76	2576	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	124301303	124301534	124301414	Y	NA	C8orf76,ZHX1	ATAD2,ZHX1-C8ORF76	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZHX1	15522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124363606	124363931	124363783	Y	NA	NA	NA	NA	NA	NA	ATAD2	62659	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	124407044	124407322	124407183	Y	NA	ATAD2,WDYHV1	NA	NA	NA	NA	ATAD2	19268	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124407455	124407786	124407574	Y	FAM91A1,C8orf76,ZHX1,ATAD2	ATAD2,WDYHV1	NA	NA	NA	NA	ATAD2	18804	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124462485	124463022	124462596	Y	NA	ATAD2,WDYHV1	NA	NA	NA	NA	WDYHV1	35520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124524433	124524792	124524749	Y	FBXO32,FBXO32	FBXO32	NA	NA	NA	NA	FBXO32	26654	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	124547812	124548082	124548041	Y	NA	FBXO32	NA	NA	NA	NA	FBXO32	3364	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	125466570	125466668	125466619	Y	NA	TRMT12,RNF139-AS1,RNF139	NA	NA	NA	NA	TRMT12	5522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	125672540	125672913	125672841	Y	NA	NA	NA	NA	NA	NA	MTSS1	65817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	125715093	125715423	125715328	Y	NSMCE2,KIAA0196,RNF139,MTSS1	MTSS1	NA	NA	NA	NA	MTSS1	23307	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126083515	126083743	126083629	Y	NA	NSMCE2,KIAA0196	NA	NA	NA	NA	NSMCE2	18178	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126112372	126112753	126112532	Y	TRIB1,NSMCE2	NSMCE2,KIAA0196	NA	NA	NA	NA	KIAA0196	10290	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126193275	126193543	126193371	Y	NA	NA	TRIB1	IMR90	Hi-C	24141950	KIAA0196	91193	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126195292	126195668	126195512	Y	TRIB1,KIAA0196,NSMCE2	NA	TRIB1	IMR90	Hi-C	24141950	KIAA0196	93210	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126232175	126232753	126232302	Y	MTSS1,KIAA0196,NSMCE2,TRIB1	NA	NA	NA	NA	NA	KIAA0196	130093	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	126238973	126239274	126239019	Y	NSMCE2,TRIB1	NA	NA	NA	NA	NA	KIAA0196	136891	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	126317403	126317692	126317515	Y	NA	NA	NA	NA	NA	NA	TRIB1	122871	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126398156	126398380	126398244	Y	KIAA0196,NSMCE2,TRIB1	TRIB1	NA	NA	NA	NA	TRIB1	42183	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126399593	126399657	126399625	Y	NA	TRIB1	NA	NA	NA	NA	TRIB1	40906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126400704	126400965	126400873	Y	NA	TRIB1	TRIB1	MCF7	ChIA-PET	22265404	TRIB1	39598	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126441416	126441734	126441625	Y	KIAA0196,NSMCE2,TRIB1	TRIB1	NA	NA	NA	NA	TRIB1	853	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	126938175	126938215	126938193	Y	NA	NA	NA	NA	NA	NA	TRIB1	497612	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	128112845	128113195	128113019	Y	NA	NA	NA	NA	NA	NA	FAM84B	544207	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	128265922	128266338	128266337	Y	NA	NA	PVT1	IMR90	Hi-C	24141950	MYC	479342	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	128353206	128353555	128353361	Y	NA	NA	LOC727677	IMR90	Hi-C	24141950	MYC	392125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	128684618	128684766	128684674	Y	NA	NA	MYC,PVT1	MCF7	ChIA-PET	22265404	MYC	60914	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	128888391	128888698	128888485	Y	NA	NA	NA	NA	NA	NA	PVT1	83612	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	128926432	128926732	128926619	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	94125	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	128973364	128973763	128973565	Y	MYC	RNU4-25P	NA	NA	NA	NA	RNU4-25P	47094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	129053712	129054462	129054053	Y	NA	RNU4-25P	NA	NA	NA	NA	RNU4-25P	32855	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	129252743	129253109	129252782	Y	NA	NA	MYC	MCF7	ChIA-PET	22265404	RNU4-25P	231886	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	130150064	130150272	130150167	Y	NA	NA	NA	NA	NA	NA	FAM49B	877103	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	130284402	130285105	130284786	Y	NA	NA	NA	NA	NA	NA	FAM49B	742270	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	130315048	130315337	130315217	Y	NA	NA	NA	NA	NA	NA	FAM49B	712038	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	130897837	130898360	130898140	Y	NA	NA	NA	NA	NA	NA	FAM49B	129015	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	131148484	131148822	131148654	Y	NA	NA	NA	NA	NA	NA	FAM49B	121109	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	131296023	131296343	131296248	Y	NA	NA	NA	NA	NA	NA	ASAP1	157563	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	131296989	131297286	131297259	Y	NA	NA	NA	NA	NA	NA	ASAP1	156620	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	131354482	131354860	131354810	Y	NA	NA	NA	NA	NA	NA	ASAP1	99046	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	132870393	132870759	132870576	Y	HHLA1	EFR3A	ADCY8	IMR90	Hi-C	24141950	EFR3A	43576	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	133221105	133221453	133221279	Y	NA	NA	NA	NA	NA	NA	EFR3A	306770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	133274886	133274900	133274893	Y	HHLA1,KCNQ3,KCNQ3	NA	NA	NA	NA	NA	EFR3A	360551	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	133318227	133318435	133318380	Y	NA	NA	NA	NA	NA	NA	LRRC6	367403	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	133490941	133491318	133491130	Y	NA	NA	NA	NA	NA	NA	LRRC6	194520	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	133562041	133562364	133562205	Y	HHLA1,KCNQ3,KCNQ3	NA	NA	NA	NA	NA	LRRC6	123474	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	133964232	133964569	133964404	Y	NA	NA	NA	NA	NA	NA	PHF20L1	178614	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	135512580	135513062	135513051	Y	NA	NA	NA	NA	NA	NA	ZFAT	210230	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	135843585	135843751	135843688	Y	ZFAT	MIR30D	ZFAT,MIR30D,MIR30B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MIR30D	28397	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr8	137280479	137280540	137280510	Y	NA	NA	NA	NA	NA	NA	RNU1-35P	527741	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	139799567	139799714	139799659	Y	NA	NA	NA	NA	NA	NA	FAM135B	292502	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	139925414	139925432	139925424	Y	NA	NA	NA	NA	NA	NA	FAM135B	418349	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	140710203	140710577	140710390	Y	KCNK9	NA	NA	NA	NA	NA	TRAPPC9	756101	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr8	140716297	140716707	140716660	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	749971	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr8	140830815	140831120	140830968	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	635558	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	141189770	141190115	141189943	Y	TRAPPC9,TRAPPC9	NA	NA	NA	NA	NA	TRAPPC9	276563	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	141479707	141479835	141479741	Y	NA	TRAPPC9,CHRAC1	EIF2C2,CHRAC1,TRAPPC9,PTK2	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	TRAPPC9	13029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	141604721	141605198	141605144	Y	EIF2C2	NA	NA	NA	NA	NA	CHRAC1	85324	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	141655804	141656158	141655981	Y	NA	NA	NA	NA	NA	NA	CHRAC1	136407	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	142425618	142425919	142425790	Y	NA	PTP4A3,HNRNPA1P38	NA	NA	NA	NA	PTP4A3	25525	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	142426003	142426250	142426062	Y	PTP4A3	PTP4A3,HNRNPA1P38	NA	NA	NA	NA	PTP4A3	25910	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	142921200	142921430	142921369	Y	NA	NA	NA	NA	NA	NA	HNRNPA1P38	454025	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	143353648	143353818	143353814	Y	TSNARE1,BAI1	NA	NA	NA	NA	NA	TSNARE1	128783	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr8	143533998	143534621	143534303	Y	LYNX1,LYNX1,TSNARE1,BAI1	BAI1	BAI1,TSNARE1	MCF7	ChIA-PET	22265404	BAI1	5207	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr8	143757526	143757895	143757616	Y	NA	JRK,LY6K	NA	NA	NA	NA	JRK	3491	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	143758809	143759081	143758941	Y	NA	JRK,LY6K	NA	NA	NA	NA	JRK	2305	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	144360422	144361034	144360946	Y	ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT	ZFP41,GLI4,RP13-582O9.5,ZNF696	NA	NA	NA	NA	RP13-582O9.5	826	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr8	144799188	144799437	144799334	Y	MAPK15	ZNF707,MAPK15,FAM83H	NA	NA	NA	NA	MAPK15	2759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	144843026	144843252	144843141	Y	NA	MAPK15,FAM83H	SCRIB,PUF60	IMR90	Hi-C	24141950	FAM83H	29055	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	144959402	144959607	144959478	Y	C8orf73,MAPK15,EPPK1	PUF60,NRBP2,EPPK1	PLEC,NRBP2,PUF60	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	EPPK1	8770	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	145025737	145026802	145026365	Y	ZC3H3,GSDMD,NAPRT1,EEF1D,SPATC1,PLEC,PARP10	GRINA	NA	NA	NA	NA	GRINA	35424	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr8	145257344	145257608	145257476	Y	NA	NA	NA	NA	NA	NA	SHARPIN	96317	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	145549095	145549459	145549304	Y	NA	BOP1,HSF1,DGAT1,SCRT1,FBXL6,ADCK5	NA	NA	NA	NA	DGAT1	522	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	145909522	145909717	145909620	Y	NA	ARHGAP39	ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	328	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	145909879	145909957	145909931	Y	SCRT1,KIFC2,LRRC24,ARHGAP39,ZNF517,ZNF34	ARHGAP39	ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	685	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	146010487	146010786	146010731	Y	NA	ZNF251,RPL8,ZNF7	NA	NA	NA	NA	ZNF34	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr8	146125688	146125902	146125777	Y	ZNF250	COMMD5,ZNF250,ZNF16	NA	NA	NA	NA	ZNF250	135	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	969561	969923	969742	Y	NA	NA	NA	NA	NA	NA	DMRT2	78431	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	2018040	2018611	2018274	Y	SMARCA2	SMARCA2	NA	NA	NA	NA	SMARCA2	4698	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	2490043	2490145	2490094	Y	NA	NA	KIAA0020	IMR90	Hi-C	24141950	VLDLR	129689	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	3576230	3576494	3576362	Y	NA	NA	NA	NA	NA	NA	RP11-509J21.1	51507	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	3877182	3877575	3877493	Y	GLIS3	NA	NA	NA	NA	NA	RP11-509J21.1	352459	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	4296901	4297617	4297146	Y	GLIS3	GLIS3	NA	NA	NA	NA	GLIS3	48775	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	4340074	4340431	4340362	Y	NA	GLIS3	GLIS3,RFX3,GLIS3-AS1,KIAA0020	IMR90	Hi-C	24141950	GLIS3	5961	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	4738592	4738723	4738708	Y	NA	AK3	NA	NA	NA	NA	AK3	1320	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	4829866	4830028	4829909	Y	NA	RCL1	NA	NA	NA	NA	RCL1	38997	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	4864348	4864647	4864448	Y	NA	NA	NA	NA	NA	NA	RCL1	73479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	4892272	4892588	4892430	Y	NA	NA	NA	NA	NA	NA	JAK2	90445	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	5580709	5581016	5580868	Y	NA	KIAA1432	NA	NA	NA	NA	KIAA1432	46009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	5627107	5627559	5627241	Y	CD274,RANBP6,KIAA2026,KIAA1432	KIAA1432	NA	NA	NA	NA	KIAA1432	82	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	6680895	6681975	6681336	Y	UHRF2,KDM4C	RP11-106A1.2,GLDC,RP11-390F4.6,KDM4C	KDM4C,UHRF2,GLDC	K562,MCF7	ChIA-PET	22265404	KDM4C	36888	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr9	8495779	8496144	8495966	Y	NA	NA	NA	NA	NA	NA	RP11-134K1.2	215167	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	8576629	8576984	8576673	Y	NA	NA	NA	NA	NA	NA	RP11-134K1.2	134327	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	8675420	8675557	8675548	Y	NA	RP11-134K1.2	NA	NA	NA	NA	RP11-134K1.2	35754	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	8676177	8676347	8676262	Y	NA	RP11-134K1.2	NA	NA	NA	NA	RP11-134K1.2	34964	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	8771816	8771826	8771822	Y	NA	NA	NA	NA	NA	NA	RP11-134K1.2	60505	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	8925554	8925879	8925717	Y	NA	NA	NA	NA	NA	NA	RP11-75C9.1	69424	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	8950472	8950666	8950590	Y	NA	NA	NA	NA	NA	NA	RP11-75C9.1	94342	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	9912233	9912588	9912411	Y	NA	NA	NA	NA	NA	NA	PTPRD	698135	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	10027810	10028140	10027960	Y	NA	NA	NA	NA	NA	NA	PTPRD	582583	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	10094485	10094558	10094522	Y	NA	NA	NA	NA	NA	NA	PTPRD	516165	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	10322828	10323093	10322961	Y	NA	NA	NA	NA	NA	NA	PTPRD	287630	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	10514994	10514999	10514997	Y	PTPRD	NA	NA	NA	NA	NA	PTPRD	95724	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	10530768	10530969	10530965	Y	NA	NA	NA	NA	NA	NA	PTPRD	79754	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	10563880	10564197	10564091	Y	PTPRD	PTPRD,RP11-87N24.2	NA	NA	NA	NA	PTPRD	46526	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	13034069	13034552	13034397	Y	NA	NA	NFIB	IMR90	Hi-C	24141950	RP11-3L8.3	221725	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	13860061	13860338	13860200	Y	NA	NA	NFIB	IMR90	Hi-C	24141950	RP11-536O18.1	415571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	14233168	14233395	14233282	Y	NFIB	NA	NA	NA	NA	NA	NFIB	163587	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	14263032	14263410	14263221	Y	NA	NA	NA	NA	NA	NA	NFIB	133572	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	14322295	14322910	14322674	Y	ZDHHC21,NFIB	NA	NA	NA	NA	NA	NFIB	74072	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr9	14349817	14350014	14349895	Y	NA	NFIB	NA	NA	NA	NA	NFIB	46968	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	14400700	14401012	14400908	Y	ZDHHC21,NFIB	NFIB	NA	NA	NA	NA	NFIB	3718	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	14908947	14909039	14908994	Y	NA	LDHAP4	NA	NA	NA	NA	FREM1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	15306066	15306408	15306119	Y	NA	TTC39B	NA	NA	NA	NA	TTC39B	708	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16505238	16505575	16505407	Y	NA	NA	NA	NA	NA	NA	RP11-62F24.2	219237	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	16508530	16508711	16508621	Y	BNC2	NA	NA	NA	NA	NA	RP11-62F24.2	216101	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	16515842	16516452	16516406	Y	NA	NA	NA	NA	NA	NA	RP11-62F24.2	208360	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16521914	16522385	16522163	Y	BNC2	NA	NA	NA	NA	NA	RP11-62F24.2	202427	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	16526132	16526493	16526417	Y	BNC2	NA	NA	NA	NA	NA	RP11-62F24.2	198319	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	16662784	16663109	16662968	Y	NA	NA	NA	NA	NA	NA	RP11-62F24.2	61703	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16666623	16666991	16666807	Y	BNC2	NA	NA	NA	NA	NA	RP11-62F24.2	57821	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16681430	16681562	16681496	Y	NA	RP11-62F24.2	NA	NA	NA	NA	RP11-62F24.2	43250	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	16709928	16710291	16710201	Y	NA	RP11-62F24.2	NA	NA	NA	NA	RP11-62F24.2	14521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16710736	16710820	16710819	Y	NA	RP11-62F24.2	NA	NA	NA	NA	RP11-62F24.2	13992	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16729817	16729878	16729869	Y	BNC2	RP11-62F24.2	NA	NA	NA	NA	RP11-62F24.2	5005	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	16794774	16794903	16794900	Y	NA	NA	NA	NA	NA	NA	RP11-62F24.2	69962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	16854631	16854704	16854668	Y	NA	BNC2	NA	NA	NA	NA	BNC2	14137	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	16869534	16869976	16869661	Y	BNC2	BNC2	NA	NA	NA	NA	BNC2	693	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chr9	17580370	17580488	17580383	Y	NA	SH3GL2	NA	NA	NA	NA	SH3GL2	3290	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	20793724	20794222	20793867	Y	NA	NA	NA	NA	NA	NA	MLLT3	173182	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	21096394	21096639	21096525	Y	KIAA1797	NA	MLLT3,KIAA1797	IMR90	Hi-C	24141950	PTPLAD2	66759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	21695810	21696232	21696052	Y	NA	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	104310	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	21696521	21696698	21696606	Y	IFNA6,IFNA1	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	103844	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	21832056	21832478	21832164	Y	NA	MTAP	NA	NA	NA	NA	MTAP	31514	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	21964976	21965347	21965178	Y	NA	CDKN2A,CDKN2B,UBA52P6	NA	NA	NA	NA	CDKN2A	27953	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	21996110	21996456	21996153	Y	NA	CDKN2A,CDKN2B,UBA52P6	NA	NA	NA	NA	CDKN2A	2810	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	21996542	21996712	21996656	Y	MTAP,CDKN2A,CDKN2A,CDKN2A,CDKN2B	CDKN2A,CDKN2B,UBA52P6	NA	NA	NA	NA	CDKN2A	3242	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	22012524	22012846	22012594	Y	NA	CDKN2A,CDKN2B,UBA52P6	NA	NA	NA	NA	UBA52P6	2370	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	22040932	22041035	22040938	Y	NA	CDKN2A,CDKN2B,UBA52P6	NA	NA	NA	NA	UBA52P6	30778	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	26975716	26975874	26975793	Y	NA	IFT74,PLAA	NA	NA	NA	NA	PLAA	30255	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	27333351	27333416	27333383	Y	IFT74,IFT74,MOBKL2B,C9orf72,C9orf72	NA	NA	NA	NA	NA	MOB3B	194363	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	27434079	27434197	27434145	Y	NA	NA	NA	NA	NA	NA	MOB3B	93582	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	27460604	27461032	27460875	Y	C9orf72,C9orf72	NA	NA	NA	NA	NA	MOB3B	66747	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	28136230	28136568	28136399	Y	NA	NA	NA	NA	NA	NA	C9orf72	564366	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	28259858	28260256	28260250	Y	LINGO2	NA	NA	NA	NA	NA	C9orf72	687994	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	28539492	28539760	28539590	Y	LINGO2	NA	NA	NA	NA	NA	C9orf72	967628	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	28649799	28650020	28649948	Y	LINGO2	NA	NA	NA	NA	NA	C9orf72	1077935	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	28813062	28813251	28813159	Y	NA	NA	NA	NA	NA	NA	C9orf72	1241198	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	29211344	29211542	29211410	Y	NA	NA	NA	NA	NA	NA	RBMXP2	1475561	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	29826427	29826586	29826507	Y	NA	NA	NA	NA	NA	NA	RBMXP2	860517	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	32429787	32430147	32430005	Y	NA	ACO1	NA	NA	NA	NA	ACO1	47169	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	32437038	32437275	32437091	Y	NA	NA	NA	NA	NA	NA	ACO1	54420	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	32443270	32443461	32443367	Y	TOPORS,DDX58	NA	NA	NA	NA	NA	ACO1	60652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	32535412	32535514	32535462	Y	NA	DDX58,TOPORS,NDUFB6	NA	NA	NA	NA	DDX58	11090	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	32535541	32535857	32535751	Y	NA	DDX58,TOPORS,NDUFB6	NA	NA	NA	NA	DDX58	11219	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	33017262	33017602	33017524	Y	NA	APTX,DNAJA1	DNAJA1	MCF7	ChIA-PET	22265404	APTX	5564	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	33023891	33023961	33023926	Y	NA	APTX,DNAJA1	NA	NA	NA	NA	DNAJA1	682	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	33033161	33033386	33033274	Y	TOPORS,DNAJA1,NFX1,SMU1	APTX,DNAJA1,SMU1	NA	NA	NA	NA	DNAJA1	9952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	33329062	33329543	33329355	Y	NA	NFX1	NA	NA	NA	NA	NFX1	40553	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	33375284	33375639	33375462	Y	NA	NA	NA	NA	NA	NA	AQP3	69970	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	33942829	33943199	33943013	Y	NA	NA	NA	NA	NA	NA	UBAP2	103748	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	34016159	34016420	34016379	Y	NA	UBAP2	NA	NA	NA	NA	UBAP2	30527	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	34394792	34394981	34394887	Y	NA	KIAA1161,C9orf24	NA	NA	NA	NA	C9orf24	849	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	34575663	34576052	34575846	Y	ARID3C,KIAA1045,DNAJB5,DNAJB5,C9orf25,ENHO,CNTFR,CNTFR	CNTFR,DCTN3	NA	NA	NA	NA	CNTFR	12069	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	34577617	34577859	34577738	Y	ARID3C,DNAJB5,DNAJB5,CNTFR,CNTFR	CNTFR,DCTN3	NA	NA	NA	NA	CNTFR	10262	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	34681857	34682174	34682025	Y	ARID3C,IL11RA,IL11RA	SIGMAR1,GALT,IL11RA,RP11-195F19.9,RP11-195F19.5	NA	NA	NA	NA	RP11-195F19.5	17748	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	35114116	35114547	35114222	Y	DNAJB5,KIAA1539	VCP,FANCG,PIGO,STOML2,UNC13B	NA	NA	NA	NA	FAM214B	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	35153448	35153469	35153459	Y	NA	FAM214B,UNC13B	UNC13B,ATP8B5P	IMR90	Hi-C	24141950	UNC13B	6530	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	35603992	35604628	35604112	Y	TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2	TESK1	NA	NA	NA	NA	TESK1	625	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	35914292	35914707	35914657	Y	NA	NDUFA5P4	NA	NA	NA	NA	NDUFA5P4	41101	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	36040345	36040403	36040371	Y	NA	RECK	NA	NA	NA	NA	RECK	5915	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	36166552	36166755	36166690	Y	CREB3,TLN1	GLIPR2,CLTA	NA	NA	NA	NA	CLTA	22098	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	36231547	36231666	36231607	Y	NA	CLTA,GNE	NA	NA	NA	NA	CLTA	42694	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	36232002	36232125	36232063	Y	GNE	CLTA,GNE	NA	NA	NA	NA	GNE	42928	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	36232965	36233105	36233040	Y	NA	CLTA,GNE	NA	NA	NA	NA	GNE	41948	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	36471008	36471193	36471156	Y	NA	RNF38	RNF38,MELK	IMR90	Hi-C	24141950	RNF38	14352	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	36764220	36764685	36764538	Y	NA	NA	MELK	IMR90	Hi-C	24141950	MELK	193361	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	36764861	36764955	36764921	Y	RNF38	NA	MELK	IMR90	Hi-C	24141950	MELK	194002	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr9	36765862	36766252	36766147	Y	RNF38,RNF38	NA	MELK	IMR90	Hi-C	24141950	MELK	195003	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	37036641	37037011	37036829	Y	ZCCHC7,ZBTB5,PAX5	PAX5	NA	NA	NA	NA	PAX5	4538	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	37197498	37198123	37197885	Y	NA	NA	NA	NA	NA	NA	ZCCHC7	78962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	37771609	37771892	37771762	Y	NA	DCAF10,EXOSC3	NA	NA	NA	NA	DCAF10	26607	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	37773119	37773290	37773253	Y	FRMPD1	DCAF10,EXOSC3	NA	NA	NA	NA	DCAF10	25209	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	37938183	37938323	37938277	Y	SHB	NA	NA	NA	NA	NA	RP11-613M10.9	128361	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	66843628	66843847	66843730	Y	NA	NA	LOC642236	IMR90	Hi-C	24141950	RP11-764K9.4	1609528	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	68417391	68418146	68417579	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	35229	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chr9	68419808	68420298	68419990	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	33077	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	68455261	68455556	68455421	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	1886	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chr9	71336446	71336479	71336451	Y	NA	PIP5K1B	NA	NA	NA	NA	PIP5K1B	17871	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	71784003	71784073	71784064	Y	TJP2	TJP2	NA	NA	NA	NA	TJP2	49794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	71941434	71941762	71941458	Y	NA	NA	NA	NA	NA	NA	TJP2	207225	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	72710725	72710959	72710842	Y	NA	NA	NA	NA	NA	NA	MAMDC2	54228	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	72801648	72801771	72801710	Y	MAMDC2	NA	NA	NA	NA	NA	SMC5	70166	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	72805213	72805492	72805447	Y	SMC5	NA	NA	NA	NA	NA	SMC5	66445	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	72923580	72923722	72923651	Y	SMC5	NA	NA	NA	NA	NA	SMC5	51643	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	73033763	73035382	73035076	Y	SMC5,KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	6223	CAGE	JHUCS-1	hg19	FANTOM5	8.49880429190233
chr9	73035561	73035945	73035863	Y	KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	8021	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chr9	73178748	73179070	73178790	Y	SMC5	NA	NA	NA	NA	NA	KLF9	151208	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	78507446	78507579	78507560	Y	PCSK5	PCSK5	NA	NA	NA	NA	PCSK5	3886	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	81309838	81310145	81309901	Y	NA	NA	TLE4	IMR90	Hi-C	24141950	PSAT1	399779	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	81641483	81641834	81641545	Y	NA	NA	NA	NA	NA	NA	CHCHD2P9	362385	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	82226280	82226508	82226439	Y	TLE4	TLE4	NA	NA	NA	NA	TLE4	41592	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	85888522	85888919	85888721	Y	NA	NA	NA	NA	NA	NA	RP11-439K3.1	56276	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	86051693	86051979	86051837	Y	NA	NA	NA	NA	NA	NA	FRMD3	99482	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	86123071	86123201	86123136	Y	UBQLN1,KIF27,HNRNPK,HNRNPK	FRMD3	NA	NA	NA	NA	FRMD3	28260	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	86238855	86239256	86239056	Y	UBQLN1,GKAP1	NA	NA	NA	NA	NA	RP11-522I20.3	81253	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	86239584	86239974	86239757	Y	NA	NA	NA	NA	NA	NA	RP11-522I20.3	80535	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	86990965	86991174	86991070	Y	NA	NA	AGTPBP1	IMR90	Hi-C	24141950	NTRK2	290292	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	87326939	87327108	87327024	Y	NTRK2,NTRK2,NTRK2	NTRK2	NA	NA	NA	NA	NTRK2	45473	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	87370377	87370471	87370425	Y	NA	NA	NA	NA	NA	NA	NTRK2	88911	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr9	87459243	87459541	87459302	Y	NA	NA	NA	NA	NA	NA	NTRK2	177777	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	88184194	88184649	88184621	Y	NA	NA	NA	NA	NA	NA	AGTPBP1	170295	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	88264467	88264715	88264594	Y	NA	NA	NA	NA	NA	NA	AGTPBP1	90229	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	88286391	88286647	88286519	Y	NA	NA	NA	NA	NA	NA	AGTPBP1	68297	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	88298792	88299000	88298900	Y	AGTPBP1	NA	NA	NA	NA	NA	AGTPBP1	55944	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	88544402	88544561	88544480	Y	NA	NAA35	NA	NA	NA	NA	NAA35	9500	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	88902044	88902242	88902143	Y	NA	ISCA1	NA	NA	NA	NA	ISCA1	6368	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	89626902	89626982	89626949	Y	NA	CDC20P1	NA	NA	NA	NA	CDC20P1	2335	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	89759959	89760319	89760025	Y	GAS1	NA	NA	NA	NA	NA	CDC20P1	135392	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	90169791	90170300	90170098	Y	DAPK1	RP11-40C6.2	NA	NA	NA	NA	RP11-40C6.2	31574	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	90182587	90182864	90182726	Y	NA	RP11-40C6.2	NA	NA	NA	NA	RP11-40C6.2	44370	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	90279667	90279982	90279701	Y	NA	NA	NA	NA	NA	NA	RP11-40C6.2	141450	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	91125141	91125399	91125267	Y	NA	NA	SPIN1,SHC3,SECISBP2,CKS2	IMR90	Hi-C	24141950	SPIN1	123807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	91795136	91795669	91795494	Y	C9orf47,SHC3	NA	NA	NA	NA	NA	CKS2	128444	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	91841165	91841448	91841286	Y	NA	NA	SHC3,LOC286238	IMR90	Hi-C	24141950	CKS2	82665	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	92004867	92005103	92005008	Y	NA	NA	NA	NA	NA	NA	SECISBP2	73446	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	92218643	92218902	92218819	Y	GADD45G	GADD45G	NA	NA	NA	NA	GADD45G	715	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	92218967	92219282	92219262	Y	NA	GADD45G	NA	NA	NA	NA	GADD45G	1039	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chr9	92276961	92277319	92277054	Y	NA	NA	NA	NA	NA	NA	GADD45G	59033	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	92762358	92762553	92762476	Y	NA	NA	NA	NA	NA	NA	GADD45G	544430	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	92887274	92887574	92887411	Y	NA	NA	UNQ6494,SYK,DIRAS2	IMR90	Hi-C	24141950	DIRAS2	515812	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	94872861	94873095	94872978	Y	NA	SPTLC1	NA	NA	NA	NA	SPTLC1	2571	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	94993084	94993195	94993158	Y	NA	NA	NA	NA	NA	NA	IARS	60843	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	95055002	95055331	95055316	Y	IPPK	IARS,CENPP,NOL8	NA	NA	NA	NA	IARS	964	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	95383874	95384172	95384023	Y	NA	IPPK	NA	NA	NA	NA	IPPK	46375	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	95452860	95453088	95452974	Y	NA	IPPK	NA	NA	NA	NA	IPPK	22313	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	95969732	95970127	95969930	Y	NA	NA	NA	NA	NA	NA	NINJ1	75162	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	95973709	95973758	95973734	Y	NA	NA	NA	NA	NA	NA	NINJ1	79139	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	96044305	96044695	96044445	Y	NA	NA	NA	NA	NA	NA	NINJ1	149735	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	96377714	96377795	96377762	Y	PHF2	PHF2	NA	NA	NA	NA	PHF2	41025	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	96434811	96435085	96434948	Y	PHF2	NA	NA	NA	NA	NA	PHF2	98122	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	96928143	96928630	96928259	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	10486	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	96928795	96929410	96929111	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	9706	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr9	97520794	97521111	97520953	Y	C9orf3	C9orf3	FANCC	IMR90	Hi-C	24141950	C9orf3	33811	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	97622499	97622697	97622598	Y	NA	NA	NA	NA	NA	NA	C9orf3	135516	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	97966578	97966817	97966786	Y	NA	NA	NA	NA	NA	NA	FANCC	111174	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	98273012	98273438	98273114	Y	C9orf102,FANCC,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	PTCH1	NA	NA	NA	NA	PTCH1	3901	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	98273818	98274186	98273872	Y	NA	PTCH1	NA	NA	NA	NA	PTCH1	3153	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	98642406	98642593	98642483	Y	PTCH1,PTCH1,C9orf102	LINC00476	NA	NA	NA	NA	LINC00476	6147	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	98744078	98744248	98744144	Y	NA	LINC00092	NA	NA	NA	NA	LINC00092	43999	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	98768233	98768612	98768423	Y	NA	LINC00092	NA	NA	NA	NA	LINC00092	19635	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	99171138	99171308	99171256	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	RP11-172F4.2	3572	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	99181547	99181719	99181643	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	ZNF367	2936	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	99408748	99408964	99408853	Y	C9orf21	CDC14B,RP11-535M15.1	NA	NA	NA	NA	CDC14B	28636	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	99535821	99536158	99535990	Y	NA	ZNF510	NA	NA	NA	NA	ZNF510	2253	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	100264469	100265020	100264497	Y	NA	TMOD1	NA	NA	NA	NA	TMOD1	3007	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	100454693	100454853	100454773	Y	TSTD2,XPA	XPA	NA	NA	NA	NA	XPA	2786	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	100548546	100549029	100548790	Y	FOXE1	NA	FOXE1,C9orf156	IMR90	Hi-C	24141950	XPA	90907	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	100565577	100566264	100565821	Y	CORO2A,FOXE1	NA	FOXE1,C9orf156	IMR90	Hi-C	24141950	XPA	107938	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	100747732	100748046	100747912	Y	NA	ANP32B	NA	NA	NA	NA	ANP32B	4089	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	100772550	100772875	100772560	Y	NA	ANP32B,NANS	NANS,TRIM14	IMR90	Hi-C	24141950	ANP32B	28907	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	100788386	100788828	100788550	Y	NA	ANP32B,NANS	NA	NA	NA	NA	NANS	28193	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	100841115	100841498	100841123	Y	C9orf156	NANS,TRIM14	NA	NA	NA	NA	NANS	24094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	101088730	101088899	101088782	Y	NA	NA	NA	NA	NA	NA	TBC1D2	72815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	101573359	101573810	101573605	Y	NA	ANKS6,GALNT12	NA	NA	NA	NA	GALNT12	5378	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	101871896	101872113	101872024	Y	TGFBR1	TGFBR1	NA	NA	NA	NA	TGFBR1	7576	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	102120009	102120156	102120083	Y	NA	NA	NA	NA	NA	NA	SEC61B	137663	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	102580616	102580992	102580865	Y	NA	RP11-554F20.1,NR4A3	NA	NA	NA	NA	RP11-554F20.1	445	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	102621794	102622137	102621866	Y	NA	RP11-554F20.1,NR4A3,STX17	NA	NA	NA	NA	NR4A3	39657	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	103173830	103174136	103174107	Y	NA	TMEFF1	C9orf30-TMEFF1,TEX10	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TMEFF1	28424	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	103192373	103192745	103192675	Y	C9orf30	TMEFF1	C9orf30-TMEFF1	IMR90	Hi-C	24141950	TMEFF1	9815	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	103641019	103641318	103641311	Y	TMEFF1	NA	NA	NA	NA	NA	LPPR1	147673	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	103795840	103796119	103795981	Y	LPPR1	LPPR1	NA	NA	NA	NA	LPPR1	6849	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	105957487	105957816	105957647	Y	NA	NA	NA	NA	NA	NA	SMC2	896725	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	107510718	107511248	107511059	Y	ABCA1,NIPSNAP3A	NIPSNAP3A,NIPSNAP3B	NA	NA	NA	NA	NIPSNAP3A	2749	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	107668768	107669725	107669153	Y	SLC44A1,OR13C3	ABCA1	NA	NA	NA	NA	ABCA1	18793	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	107730510	107730878	107730708	Y	SLC44A1,FSD1L,FSD1L,ABCA1	ABCA1	ABCA1	IMR90	Hi-C	24141950	ABCA1	41992	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	108266303	108266427	108266370	Y	FSD1L,FSD1L,TMEM38B	NA	NA	NA	NA	NA	FKTN	51984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	108284643	108284789	108284719	Y	NA	FKTN	NA	NA	NA	NA	FKTN	33622	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	108474101	108474491	108474408	Y	TMEM38B	TMEM38B	NA	NA	NA	NA	TMEM38B	19276	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	109627297	109627657	109627483	Y	NA	ZNF462	NA	NA	NA	NA	ZNF462	3919	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	109647843	109648061	109647872	Y	NA	ZNF462	NA	NA	NA	NA	ZNF462	24465	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	111759404	111759745	111759575	Y	NA	CTNNAL1	NA	NA	NA	NA	CTNNAL1	14064	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	111774521	111775173	111774726	Y	NA	CTNNAL1	NA	NA	NA	NA	CTNNAL1	712	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	112091755	112092133	112091802	Y	PTPN3	EPB41L4B	EPB41L4B	MCF7	ChIA-PET	22265404	EPB41L4B	10511	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	112262069	112262452	112262225	Y	PTPN3	PTPN3	NA	NA	NA	NA	PTPN3	3479	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	112827300	112827392	112827326	Y	AKAP2	RP11-151F5.2	NA	NA	NA	NA	RP11-151F5.2	41662	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	112858157	112858314	112858244	Y	AKAP2	NA	NA	NA	NA	NA	RP11-151F5.2	72519	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	112937115	112937268	112937191	Y	NA	NA	NA	NA	NA	NA	TXN	79652	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	113014576	113014999	113014920	Y	AKAP2,TXN	TXN	NA	NA	NA	NA	TXN	1921	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	114585349	114585680	114585428	Y	NA	NA	MIR3134,C9orf84,SUSD1,UGCG	IMR90	Hi-C	24141950	UGCG	71366	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	114792518	114792641	114792625	Y	NA	NA	NA	NA	NA	NA	UGCG	135472	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	114805021	114805139	114805071	Y	NA	NA	NA	NA	NA	NA	SUSD1	130549	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	114809786	114810087	114810015	Y	GNG10	NA	NA	NA	NA	NA	SUSD1	125601	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	114831912	114832228	114831995	Y	GNG10,SUSD1	NA	NA	NA	NA	NA	SUSD1	103460	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	114960117	114960327	114960222	Y	NA	SUSD1	NA	NA	NA	NA	SUSD1	24429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	115067475	115067560	115067518	Y	SNX30,ROD1,KIAA1958,HSDL2	PTBP3	NA	NA	NA	NA	PTBP3	26387	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	115294232	115294441	115294354	Y	NA	KIAA1958,C9orf147	NA	NA	NA	NA	C9orf147	46748	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	115440529	115440762	115440646	Y	NA	NA	NA	NA	NA	NA	RP11-276E15.4	69974	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	115527127	115527401	115527315	Y	NA	RP11-276E15.4,SNX30	NA	NA	NA	NA	SNX30	16009	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	115982258	115982474	115982402	Y	SNX30,SLC46A2,RGS3,SLC31A2,FKBP15	FKBP15,SLC31A1	NA	NA	NA	NA	SLC31A1	450	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	116281787	116282895	116282664	Y	NA	NA	NA	NA	NA	NA	RGS3	76776	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	117080236	117080340	117080297	Y	TNFSF15,ATP6V1G1,ORM1	NA	NA	NA	NA	NA	COL27A1	164396	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	117125723	117126093	117125808	Y	DFNB31,DFNB31,AKNA	NA	NA	NA	NA	NA	DFNB31	139637	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	117137275	117137511	117137393	Y	DFNB31,DFNB31	NA	NA	NA	NA	NA	DFNB31	128219	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	117152820	117152929	117152875	Y	NA	NA	NA	NA	NA	NA	DFNB31	112801	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	117159955	117160026	117159991	Y	NA	NA	NA	NA	NA	NA	DFNB31	105704	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	117785314	117785612	117785505	Y	NA	NA	NA	NA	NA	NA	TNC	92924	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	117860552	117860777	117860665	Y	NA	TNC	NA	NA	NA	NA	TNC	17759	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	118353952	118354125	118354022	Y	TNC	NA	ASTN2,PAPPA,LOC100128505,LINC00474	IMR90	Hi-C	24141950	TNC	475416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	118434933	118435213	118435118	Y	NA	NA	ASTN2,PAPPA,LOC100128505	IMR90	Hi-C	24141950	TNC	556397	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	119404408	119404429	119404420	Y	NA	TRIM32	NA	NA	NA	NA	TRIM32	43152	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	119451109	119451442	119451274	Y	NA	TRIM32	NA	NA	NA	NA	TRIM32	3528	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	123492019	123492178	123492076	Y	TRAF1,TRAF1	MEGF9	MEGF9,FBXW2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	MEGF9	17271	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	123635278	123635355	123635317	Y	NA	PSMD5,PHF19	NA	NA	NA	NA	PHF19	2251	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	123640419	123640826	123640772	Y	NA	PSMD5,PHF19	NA	NA	NA	NA	PHF19	2813	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	124040831	124041134	124040970	Y	GSN	NA	NA	NA	NA	NA	RAB14	57539	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	124361597	124361984	124361689	Y	NA	DAB2IP	NA	NA	NA	NA	DAB2IP	34261	CAGE	JHUCS-1	hg19	FANTOM5	1.9997186569182
chr9	124463473	124463936	124463619	Y	TTLL11,DAB2IP	NA	NA	NA	NA	NA	DAB2IP	136137	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	125934200	125934213	125934207	Y	OR1L4,OR1L6,GPR21	NA	NA	NA	NA	NA	STRBP	94642	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	125956755	125956816	125956769	Y	NA	NA	NA	NA	NA	NA	STRBP	72039	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	126028834	126029635	126029406	Y	NA	NA	NA	NA	NA	NA	STRBP	0	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	126597388	126597650	126597587	Y	DENND1A	NA	NA	NA	NA	NA	DENND1A	92781	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	126644407	126644614	126644564	Y	LHX2	DENND1A	NA	NA	NA	NA	DENND1A	45817	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chr9	126760925	126761520	126761186	Y	NA	LHX2,RP11-85O21.2	DENND1A,LHX2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LHX2	429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	126780014	126780240	126780127	Y	NA	LHX2,RP11-85O21.2	NA	NA	NA	NA	RP11-85O21.2	10339	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	126780358	126780798	126780587	Y	NA	LHX2,RP11-85O21.2	NA	NA	NA	NA	RP11-85O21.2	10683	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	127621077	127621225	127621167	Y	NA	RPL35,ARPC5L,RNU4-82P	NA	NA	NA	NA	RPL35	1035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	127976903	127977044	127976974	Y	NA	PPP6C,RABEPK,HSPA5,RP11-65N13.8,GAPVD1	NA	NA	NA	NA	RABEPK	16082	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	128275898	128276280	128276126	Y	NA	NA	NA	NA	NA	NA	MAPKAP1	191233	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	128395270	128395491	128395304	Y	PPP6C,HSPA5,GAPVD1	NA	NA	NA	NA	NA	MAPKAP1	72022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	129484571	129485188	129484881	Y	NA	NA	NA	NA	NA	NA	ZBTB43	80097	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	129485609	129485808	129485757	Y	FAM125B,ZBTB34	NA	NA	NA	NA	NA	ZBTB43	79477	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	129862611	129862888	129862750	Y	NA	ANGPTL2	NA	NA	NA	NA	ANGPTL2	20274	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	130590782	130591142	130590862	Y	FAM129B,TOR2A,CDK9,FPGS,FPGS	CDK9,FPGS,AK1	NA	NA	NA	NA	FPGS	35906	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	130627836	130628198	130628079	Y	NA	AK1,ST6GALNAC6,ST6GALNAC4	NA	NA	NA	NA	AK1	9824	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	130733540	130734011	130733863	Y	SLC25A25,NAIF1,DPM2,FAM102A,FAM102A	DPM2,FAM102A	NA	NA	NA	NA	FAM102A	6781	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	130788612	130788994	130788712	Y	CDK9,SLC25A25,NAIF1,DPM2,FAM102A	FAM102A,SLC25A25,NAIF1	SLC25A25,NAIF1,FAM102A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC25A25	39486	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	130834459	130834744	130834726	Y	NA	SLC25A25,NAIF1	NA	NA	NA	NA	NAIF1	5974	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	130834970	130835273	130835056	Y	FAM129B,TOR2A,SH2D3C,CDK9,SLC25A25	SLC25A25,NAIF1	NA	NA	NA	NA	NAIF1	6485	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	131909035	131909223	131909126	Y	PHYHD1	PPP2R4,CRAT,IER5L	NA	NA	NA	NA	IER5L	29317	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	131937094	131937487	131937262	Y	PRRX2,METTL11A,ASB6,ZDHHC12,TBC1D13,ENDOG,PHYHD1,DOLK,CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L	IER5L	NA	NA	NA	NA	IER5L	1053	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132114054	132114292	132114085	Y	NA	RP11-65J3.1	PPP2R4,CRAT,IER5L,C9orf106,METTL11A,C9orf50	MCF7,HELA,K562,IMR90	ChIA-PET,5C,Hi-C	22265404,22955621,24141950	RP11-65J3.1	21475	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	132114489	132114812	132114671	Y	NA	RP11-65J3.1	PPP2R4,CRAT,IER5L,C9orf106,METTL11A,C9orf50	MCF7,HELA,K562,IMR90	ChIA-PET,5C,Hi-C	22265404,22955621,24141950	RP11-65J3.1	21910	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	132115283	132115797	132115318	Y	NA	RP11-65J3.1	PPP2R4,CRAT,IER5L,C9orf106,METTL11A,C9orf50	MCF7,HELA,K562,IMR90	ChIA-PET,5C,Hi-C	22265404,22955621,24141950	RP11-65J3.1	22704	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	132171147	132171349	132171255	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	72381	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132175926	132176326	132176076	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	67404	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr9	132223086	132223659	132223410	Y	C9orf106,TOR1B	LINC00963	PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	20071	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chr9	132244062	132244824	132244277	Y	NA	LINC00963	NA	NA	NA	NA	LINC00963	332	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132249112	132249430	132249268	Y	CRAT,IER5L,PRRX2	LINC00963	NA	NA	NA	NA	LINC00963	5382	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132257886	132258547	132258348	Y	NA	LINC00963	NA	NA	NA	NA	LINC00963	14156	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	132312044	132312247	132312152	Y	NA	NA	DOLPP1,LOC100506190,FAM73B,IER5L,CRAT,PPP2R4,C9orf106,C9orf50,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	68314	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132330057	132330508	132330201	Y	NA	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	71936	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132330921	132331424	132331168	Y	IER5L,C9orf50	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	71020	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132331590	132331738	132331651	Y	CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	70706	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132359283	132359664	132359324	Y	CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L,PTGES,METTL11A,ASB6	ASB6	NA	NA	NA	NA	ASB6	42780	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132429420	132429769	132429595	Y	C9orf50,PRRX2	ASB6,PRRX2	NA	NA	NA	NA	PRRX2	3500	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132514052	132514155	132514104	Y	NA	PTGES,TOR1B	NA	NA	NA	NA	PTGES	726	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132648080	132648314	132648193	Y	ASB6,TOR1B,C9orf78,USP20,USP20,FNBP1	NA	NA	NA	NA	NA	C9orf78	51938	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	132802902	132803300	132803100	Y	ASB6,USP20,USP20,FNBP1	FNBP1,GPR107	NA	NA	NA	NA	FNBP1	173	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	133235256	133235504	133235379	Y	NA	NA	NCS1,ASS1,FUBP3	IMR90	Hi-C	24141950	ASS1	82812	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	133342925	133343088	133343007	Y	PRDM12	ASS1	NA	NA	NA	NA	ASS1	24609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	133619181	133619471	133619230	Y	NA	ABL1	NA	NA	NA	NA	ABL1	31848	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	134157961	134158264	134158112	Y	NA	PPAPDC3	NUP214,FAM78A,PPAPDC3,PRRC2B	IMR90	Hi-C	24141950	PPAPDC3	4817	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	134248752	134249121	134248943	Y	AIF1L,POMT1,PRRC2B	PRRC2B	PRRC2B,NUP214,FAM78A	IMR90	Hi-C	24141950	PRRC2B	18359	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chr9	134573283	134574205	134573669	Y	FAM78A,RAPGEF1,RAPGEF1	RAPGEF1	NA	NA	NA	NA	RAPGEF1	39256	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	134577502	134577617	134577602	Y	NA	RAPGEF1	NA	NA	NA	NA	RAPGEF1	35844	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	134608936	134609538	134609242	Y	RAPGEF1,RAPGEF1	RAPGEF1	NA	NA	NA	NA	RAPGEF1	3923	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	134913456	134913470	134913463	Y	NA	MED27	NA	NA	NA	NA	MED27	39825	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	135197315	135197652	135197484	Y	NA	SETX	NA	NA	NA	NA	SETX	30720	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	135495171	135495179	135495175	Y	NTNG2	GTF3C4,DDX31	NA	NA	NA	NA	GTF3C4	48243	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	136022907	136023306	136022967	Y	GTF3C4,DDX31,TSC1,RALGDS	RALGDS,GBGT1	NA	NA	NA	NA	RALGDS	13995	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	136284309	136284583	136284382	Y	C9orf96	SURF4,C9orf96,REXO4	NA	NA	NA	NA	REXO4	3145	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	136292897	136293168	136293034	Y	SLC2A6,RALGDS	REXO4,SLC2A6	NA	NA	NA	NA	REXO4	11733	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	136579870	136580130	136580087	Y	NA	SARDH	NA	NA	NA	NA	SARDH	22947	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	136746393	136746610	136746453	Y	VAV2	NA	NA	NA	NA	NA	VAV2	109116	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	137030495	137030803	137030732	Y	NA	WDR5	NA	NA	NA	NA	WDR5	32008	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	137285570	137286195	137285918	Y	NA	NA	NA	NA	NA	NA	RXRA	78626	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	137667512	137667789	137667676	Y	OLFM1,OLFM1	NA	NA	NA	NA	NA	COL5A1	135892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	138016639	138016801	138016720	Y	NA	NA	NA	NA	NA	NA	OLFM1	51371	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	138348639	138348707	138348673	Y	NA	PPP1R26,MRPS2,C9orf116	NA	NA	NA	NA	PPP1R26	20218	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chr9	138624743	138624998	138624873	Y	KCNT1	NA	NA	NA	NA	NA	CAMSAP1	172076	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	138797876	138798018	138797978	Y	CAMSAP1	CAMSAP1,RP11-432J22.2	NA	NA	NA	NA	RP11-432J22.2	218	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	138986008	138986159	138986118	Y	NACC2	NACC2,C9orf69	NA	NA	NA	NA	NACC2	877	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	139123667	139124081	139124003	Y	SEC16A,NOTCH1,CARD9	LHX3,QSOX2	NA	NA	NA	NA	QSOX2	11606	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	139608163	139608561	139608378	Y	EGFL7,EGFL7,NPDC1,FAM69B	AGPAT2,FAM69B,SNHG7	NA	NA	NA	NA	FAM69B	3141	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	139826661	139826850	139826762	Y	NOTCH1,NDOR1,LCNL1,TRAF2	FBXW5	NA	NA	NA	NA	FBXW5	10298	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chr9	140023271	140023604	140023504	Y	EHMT1,ABCA2,PNPLA7,NRARP,ANAPC2	MAN1B1,DPP7,GRIN1,MIR3621	NA	NA	NA	NA	GRIN1	7238	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	140023869	140024391	140024239	Y	NA	MAN1B1,DPP7,GRIN1,MIR3621	GRIN1	K562	ChIA-PET	22265404	GRIN1	6451	CAGE	JHUCS-1	hg19	FANTOM5	6.83237207780384
chr9	140047623	140048201	140047695	Y	NA	DPP7,GRIN1,MIR3621,ANAPC2,SSNA1,TPRN,TMEM203,NDOR1	NA	NA	NA	NA	MIR3621	13521	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	140091235	140091458	140091327	Y	C8G,LCNL1,ABCA2,PNPLA7,TPRN	MIR3621,ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	TPRN	5187	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	140101916	140102100	140102008	Y	C9orf172,FUT7	MIR3621,ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	NDOR1	3769	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	140117588	140118357	140118103	Y	C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1	ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	TUBB4B	15308	CAGE	JHUCS-1	hg19	FANTOM5	1.83307543550835
chr9	140134697	140134985	140134927	Y	C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3	TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	TUBB4B	1032	CAGE	JHUCS-1	hg19	FANTOM5	2.49964832114774
chr9	140200054	140200221	140200146	Y	EXD3,NRARP	NRARP	NA	NA	NA	NA	NRARP	5351	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	140655578	140655793	140655680	Y	PNPLA7	NA	NA	NA	NA	NA	EHMT1	144134	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chr9	140689053	140689448	140689207	Y	NA	NA	NA	NA	NA	NA	EHMT1	177609	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	1479744	1480128	1479953	Y	NA	SLC25A6	NA	NA	NA	NA	SLC25A6	29489	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	1480354	1481325	1480771	Y	NA	SLC25A6	NA	NA	NA	NA	SLC25A6	28292	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	1513605	1514177	1513885	Y	NA	SLC25A6	NA	NA	NA	NA	SLC25A6	3988	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	1514556	1514901	1514870	Y	ASMTL,ASMT,AKAP17A,SLC25A6,ASMTL	SLC25A6	NA	NA	NA	NA	SLC25A6	4939	CAGE	JHUCS-1	hg19	FANTOM5	2.49964832114774
chrX	1524384	1524716	1524554	Y	CRLF2,CRLF2,CSF2RA,CSF2RA,P2RY8,ASMTL,ASMT,AKAP17A,IL3RA,SLC25A6,ASMTL	SLC25A6,ASMTL	NA	NA	NA	NA	SLC25A6	14767	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	1600679	1600951	1600851	Y	CSF2RA,CSF2RA,IL3RA,SLC25A6,ASMTL,ASMTL,ASMT,AKAP17A,P2RY8	ASMTL	NA	NA	NA	NA	ASMTL	30024	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	2067813	2068091	2068086	Y	NA	NA	NA	NA	NA	NA	ZBED1	348917	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	2243545	2243844	2243759	Y	ZBED1,ZBED1,DHRSX	NA	NA	NA	NA	NA	ZBED1	173164	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	2301315	2301326	2301321	Y	NA	NA	NA	NA	NA	NA	ZBED1	115682	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	2626302	2626463	2626390	Y	ZBED1,ZBED1,DHRSX	CD99	NA	NA	NA	NA	CD99	19082	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	2626782	2627186	2626915	Y	ZBED1,ZBED1,DHRSX,CD99	CD99	NA	NA	NA	NA	CD99	19562	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	2719389	2719617	2719532	Y	NA	GYG2	NA	NA	NA	NA	GYG2	25212	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	3263317	3263504	3263415	Y	NA	MXRA5	NA	NA	NA	NA	MXRA5	635	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chrX	3732842	3733263	3733002	Y	PRKX	NA	NA	NA	NA	NA	PRKX	103193	CAGE	JHUCS-1	hg19	FANTOM5	2.16636187832805
chrX	6137776	6138094	6138031	Y	NLGN4X,NLGN4X	NLGN4X	NA	NA	NA	NA	NLGN4X	6810	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	7901438	7901508	7901476	Y	NA	PNPLA4	NA	NA	NA	NA	PNPLA4	7658	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	8698180	8698491	8698336	Y	NA	NA	NA	NA	NA	NA	KAL1	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	8895175	8895564	8895377	Y	FAM9A,FAM9A,FAM9B	NA	NA	NA	NA	NA	KAL1	196948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	9536624	9537203	9536862	Y	TBL1X,TBL1X	NA	NA	NA	NA	NA	TBL1X	107289	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	9701264	9701389	9701313	Y	NA	NA	NA	NA	NA	NA	SHROOM2	51107	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	10161663	10162021	10162010	Y	NA	CLCN4	NA	NA	NA	NA	CLCN4	38639	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	10540681	10540690	10540686	Y	NA	NA	NA	NA	NA	NA	MID1	309083	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	10851081	10851118	10851099	Y	NA	MID1	NA	NA	NA	NA	MID1	1308	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	11460430	11460509	11460495	Y	AMELX	NA	NA	NA	NA	NA	MSL3	313769	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	13138325	13138351	13138340	Y	NA	NA	FAM9C,LOC100133123,TMSB4X	IMR90	Hi-C	24141950	TMSB4X	147098	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	13318186	13318365	13318276	Y	NA	NA	NA	NA	NA	NA	GPX1P1	77094	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	13687345	13687715	13687534	Y	TCEANC,RAB9A	TCEANC,RAB9A	NA	NA	NA	NA	RAB9A	17529	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	14262210	14262757	14262259	Y	NA	NA	NA	NA	NA	NA	GEMIN8	216198	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	15713039	15713439	15713221	Y	NA	CA5BP1	NA	NA	NA	NA	CA5BP1	21984	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	15787454	15787695	15787561	Y	NA	ZRSR2	NA	NA	NA	NA	ZRSR2	18900	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	15852343	15852548	15852528	Y	NA	ZRSR2,AP1S2	NA	NA	NA	NA	AP1S2	18506	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	16203717	16204054	16203956	Y	NA	RPL6P30	CTPS2	IMR90	Hi-C	24141950	RPL6P30	11358	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	16805192	16805460	16805250	Y	TXLNG	TXLNG	NA	NA	NA	NA	TXLNG	2642	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	16900871	16900973	16900947	Y	TXLNG	RBBP7,RNU4-6P	RBBP7,TXLNG	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	RNU4-6P	9481	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	18693104	18693424	18693141	Y	PHKA2,CDKL5	NA	NA	NA	NA	NA	CDKL5	251401	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	19701008	19701387	19701257	Y	SH3KBP1	NA	NA	NA	NA	NA	MAP3K15	169629	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	19774987	19775285	19775138	Y	NA	NA	NA	NA	NA	NA	SH3KBP1	128434	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	19815616	19815777	19815695	Y	RPS6KA3,SH3KBP1,SH3KBP1	NA	NA	NA	NA	NA	SH3KBP1	87942	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	20283183	20283718	20283506	Y	SH3KBP1,RPS6KA3	NA	NA	NA	NA	NA	RPS6KA3	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	22346680	22346767	22346724	Y	NA	NA	PHEX	IMR90	Hi-C	24141950	SMS	389989	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	22670840	22671069	22670982	Y	NA	NA	NA	NA	NA	NA	PTCHD1	679064	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	22708356	22708573	22708502	Y	NA	NA	NA	NA	NA	NA	PTCHD1	641560	CAGE	JHUCS-1	hg19	FANTOM5	1.16650254986895
chrX	23320949	23320962	23320957	Y	NA	PTCHD1	NA	NA	NA	NA	PTCHD1	29171	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	23902825	23903036	23902985	Y	ZFX,ZFX,ZFX,ZFX,ACOT9,SAT1	APOO	NA	NA	NA	NA	APOO	21021	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	23916832	23916979	23916884	Y	ZFX,ZFX,ZFX,ZFX,ACOT9,SAT1	APOO	NA	NA	NA	NA	APOO	7078	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	24044003	24044417	24044292	Y	ZFX,ZFX,ZFX,ZFX,PDK3,ACOT9,SAT1	EIF2S3	NA	NA	NA	NA	EIF2S3	26416	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	24497300	24497460	24497369	Y	ZFX,ZFX,ZFX,ZFX	PDK3	NA	NA	NA	NA	PDK3	15962	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	24534920	24535303	24535112	Y	NA	NA	NA	NA	NA	NA	PDK3	53582	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	28961310	28961674	28961353	Y	NA	NA	NA	NA	NA	NA	IL1RAPL1	357794	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	29157464	29157469	29157467	Y	NA	NA	NA	NA	NA	NA	IL1RAPL1	553948	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	29320225	29320230	29320228	Y	NA	NA	NA	NA	NA	NA	IL1RAPL1	716709	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	30675885	30676221	30676093	Y	CXorf21,GK	GK	NA	NA	NA	NA	GK	6409	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39018443	39018533	39018484	Y	NA	NA	NA	NA	NA	NA	TSPAN7	599820	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39646201	39646652	39646229	Y	NA	GAPDHP1	NA	NA	NA	NA	GAPDHP1	811	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	39865489	39865898	39865566	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	168684	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	39866067	39866462	39866265	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	168120	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39872499	39873023	39872596	Y	NA	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	161559	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39873339	39874259	39873676	Y	NA	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	160323	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	39953769	39954197	39953849	Y	BCOR	NA	NA	NA	NA	NA	BCOR	80385	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	39963356	39963613	39963579	Y	NA	NA	NA	NA	NA	NA	BCOR	70969	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39963931	39964200	39963990	Y	BCOR	NA	NA	NA	NA	NA	BCOR	70382	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39964528	39964690	39964611	Y	BCOR	NA	NA	NA	NA	NA	BCOR	69892	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	39965558	39965902	39965820	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	68680	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chrX	39968308	39968728	39968376	Y	BCOR	NA	NA	NA	NA	NA	BCOR	65854	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	40013089	40013254	40013186	Y	NA	BCOR	NA	NA	NA	NA	BCOR	21328	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	40028554	40028949	40028781	Y	NA	BCOR	NA	NA	NA	NA	BCOR	5633	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	40034694	40035505	40035056	Y	BCOR,CXorf38,ATP6AP2,BCOR	BCOR	NA	NA	NA	NA	BCOR	112	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	40869896	40870061	40869955	Y	ATP6AP2	NA	MED14,USP9X	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP9X	72827	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	40943673	40944218	40943773	Y	CXorf38,MED14,DDX3X,USP9X	USP9X	NA	NA	NA	NA	USP9X	785	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	41301456	41301878	41301579	Y	NA	NA	DDX3X	K562	ChIA-PET	22265404	DDX3X	110805	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	41480372	41480697	41480463	Y	NA	NA	NA	NA	NA	NA	DDX3X	289721	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	41759638	41759871	41759773	Y	NA	CASK	NA	NA	NA	NA	CASK	20845	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	43888590	43889088	43888779	Y	EFHC2	NA	NA	NA	NA	NA	EFHC2	311830	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	44733657	44734406	44734027	Y	KDM6A	KDM6A	NA	NA	NA	NA	KDM6A	2900	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	44774748	44775132	44774822	Y	NA	KDM6A	NA	NA	NA	NA	KDM6A	43991	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	46278987	46279293	46279130	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18856	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	46316672	46316948	46316811	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18523	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	46989082	46989431	46989227	Y	NA	RBM10,NDUFB11	NA	NA	NA	NA	RBM10	12837	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	47142532	47142862	47142593	Y	NA	NA	NA	NA	NA	NA	USP11	52443	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	47415526	47415793	47415667	Y	NA	ARAF,TIMP1	NA	NA	NA	NA	ARAF	2723	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	47423323	47423681	47423373	Y	CDK16,CFP,CFP,ARAF	ARAF,TIMP1	NA	NA	NA	NA	ARAF	4807	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	47440734	47441109	47440922	Y	CFP,CFP,ARAF	ARAF,TIMP1,SYN1	NA	NA	NA	NA	TIMP1	1022	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	48571549	48571765	48571661	Y	NA	SUV39H1	NA	NA	NA	NA	SUV39H1	19604	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	48571837	48572283	48571996	Y	TBC1D25,PQBP1,PIM2,OTUD5,GRIPAP1	SUV39H1	NA	NA	NA	NA	SUV39H1	19892	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	48643715	48644055	48643827	Y	NA	HDAC6,PCSK1N	NA	NA	NA	NA	HDAC6	13729	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	48748167	48748450	48748403	Y	NA	PQBP1,TIMM17B,SLC35A2,PIM2	NA	NA	NA	NA	PQBP1	4745	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	48748801	48749222	48749175	Y	NA	PQBP1,TIMM17B,SLC35A2,PIM2	NA	NA	NA	NA	PQBP1	3973	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	48794332	48794681	48794452	Y	PORCN,TBC1D25,WAS,PQBP1,TFE3,PPP1R3F,FOXP3,PIM2,OTUD5,OTUD5,GRIPAP1	PQBP1,TIMM17B,SLC35A2,PIM2,OTUD5,KCND1	NA	NA	NA	NA	OTUD5	18967	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	49011448	49011844	49011738	Y	GATA1,HDAC6,MAGIX	GPKOW,PLP2,SYP	MAGIX,PLP2	IMR90	Hi-C	24141950	PLP2	14429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	49012442	49012818	49012676	Y	NA	GPKOW,PLP2,SYP	MAGIX,PLP2	IMR90	Hi-C	24141950	PLP2	13455	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	49108550	49108714	49108667	Y	PIM2,PPP1R3F,FOXP3	HSPB1P2,CCDC22,PPP1R3F	NA	NA	NA	NA	PPP1R3F	15592	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	52004971	52005124	52005057	Y	NA	NA	NA	NA	NA	NA	MAGED1	460868	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	52949996	52950343	52950129	Y	TSPYL2,KDM5C,FAM156A	FAM156B	NA	NA	NA	NA	FAM156B	31660	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	52964244	52964539	52964367	Y	TSPYL2,KDM5C,IQSEC2,FAM156A	FAM156B	NA	NA	NA	NA	FAM156B	45908	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chrX	53110126	53110560	53110260	Y	NA	GPR173,TSPYL2,LINC01155	NA	NA	NA	NA	TSPYL2	577	CAGE	JHUCS-1	hg19	FANTOM5	0.666572885639399
chrX	53155305	53155690	53155322	Y	XAGE5,FAM156A,FAM156B,FAM156A,GPR173,IQSEC2,TSPYL2	TSPYL2,LINC01155	KDM5C	IMR90	Hi-C	24141950	LINC01155	33978	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	53398923	53399250	53399087	Y	NA	RIBC1,SMC1A	NA	NA	NA	NA	RIBC1	48389	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	53428419	53428681	53428625	Y	NA	RIBC1,SMC1A,HSD17B10	NA	NA	NA	NA	RIBC1	18958	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	53468564	53468782	53468716	Y	IQSEC2	RIBC1,SMC1A,HSD17B10	NA	NA	NA	NA	HSD17B10	9244	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	54665732	54666388	54666226	Y	NA	NA	ITIH6,MAGED2	MCF7	ChIA-PET	22265404	GNL3L	111088	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	56269843	56269989	56269918	Y	NA	NA	NA	NA	NA	NA	UBQLN2	318037	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	62772082	62772285	62772184	Y	NA	RP11-357C3.3	NA	NA	NA	NA	RP11-357C3.3	6666	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	67870380	67870574	67870477	Y	NA	STARD8	NA	NA	NA	NA	STARD8	4872	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	68004355	68004677	68004478	Y	NA	EFNB1	NA	NA	NA	NA	EFNB1	42163	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	70275409	70275661	70275633	Y	NA	RNU1-56P,SNX12,FOXO4	NA	NA	NA	NA	SNX12	10612	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	70401853	70402134	70401993	Y	IL2RG,MED12,TAF1,OGT,CXCR3,NONO	NLGN3	NA	NA	NA	NA	NLGN3	39172	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	70640504	70640913	70640718	Y	NA	NA	NA	NA	NA	NA	TAF1	56390	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	70838981	70839353	70839256	Y	TAF1,OGT,CXCR3	NA	NA	NA	NA	NA	OGT	88048	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	71402877	71403170	71402921	Y	NA	PIN4	NA	NA	NA	NA	PIN4	3674	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	71761722	71762003	71761864	Y	NA	HDAC8	NA	NA	NA	NA	HDAC8	28950	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	71785357	71785413	71785385	Y	NA	HDAC8	NA	NA	NA	NA	HDAC8	5540	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	73228588	73229157	73228689	Y	CHIC1	NA	NA	NA	NA	NA	JPX	66429	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	73236075	73236382	73236224	Y	CHIC1	NA	NA	NA	NA	NA	JPX	73916	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	73237406	73237798	73237506	Y	CHIC1	NA	NA	NA	NA	NA	JPX	75247	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	73246732	73246982	73246857	Y	CHIC1	NA	NA	NA	NA	NA	JPX	84573	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	73340869	73341139	73340910	Y	RLIM	NA	NA	NA	NA	NA	USMG5P1	50586	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	73350281	73350820	73350789	Y	RLIM	USMG5P1	JPX	IMR90	Hi-C	24141950	USMG5P1	40905	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	73352212	73352497	73352336	Y	NA	USMG5P1	JPX	IMR90	Hi-C	24141950	USMG5P1	39228	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	73755621	73755953	73755678	Y	RLIM	NA	NA	NA	NA	NA	RLIM	76499	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	73756210	73756567	73756298	Y	NA	NA	NA	NA	NA	NA	RLIM	75885	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	73791399	73791714	73791557	Y	RLIM	RLIM	NA	NA	NA	NA	RLIM	40738	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	74143243	74143469	74143354	Y	KIAA2022	NA	NA	NA	NA	NA	KIAA2022	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	74958533	74958836	74958643	Y	ZDHHC15,MAGEE2	TTC3P1	NA	NA	NA	NA	TTC3P1	5913	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	77226253	77226302	77226278	Y	NA	NA	NA	NA	NA	NA	ATP7A	62059	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	85145367	85145588	85145476	Y	NA	NA	NA	NA	NA	NA	CHM	154978	CAGE	JHUCS-1	hg19	FANTOM5	1.49978899268865
chrX	85278748	85279124	85278988	Y	CHM	CHM	NA	NA	NA	NA	CHM	21442	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	85280770	85281145	85280958	Y	CHM	CHM	NA	NA	NA	NA	CHM	19421	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	85339971	85340972	85340615	Y	NA	CHM	NA	NA	NA	NA	CHM	39405	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	87351546	87351899	87351791	Y	NA	NA	NA	NA	NA	NA	CHM	2050980	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	92479084	92479478	92479382	Y	NA	RP13-88F20.1	NA	NA	NA	NA	RP13-88F20.1	1070	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	99913933	99914424	99914133	Y	SYTL4,SYTL4	TSPAN6	NA	NA	NA	NA	TSPAN6	20945	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	101914784	101914936	101914847	Y	BHLHB9,GPRASP1,GPRASP1	NA	NA	NA	NA	NA	GPRASP2	50168	CAGE	JHUCS-1	hg19	FANTOM5	1.3331457712788
chrX	103120032	103120203	103120118	Y	TCEAL1,ZCCHC18,RAB9B	RAB9B	NA	NA	NA	NA	RAB9B	34874	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	103637701	103637973	103637837	Y	NA	NA	NA	NA	NA	NA	FAM199X	228400	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	106919078	106919623	106919349	Y	TSC22D3,TSC22D3	PRPS1	TSC22D3,PRPS1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PRPS1	49341	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	106920003	106920801	106920325	Y	TSC22D3,TSC22D3	NA	TSC22D3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PRPS1	50266	CAGE	JHUCS-1	hg19	FANTOM5	1.6664322140985
chrX	107070299	107070693	107070500	Y	MID2	NA	NA	NA	NA	NA	TSC22D3	51727	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	108883543	108883897	108883721	Y	NA	NA	NA	NA	NA	NA	ACSL4	90735	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	110863259	110863845	110863518	Y	NA	EIF4BP7,ALG13	NA	NA	NA	NA	EIF4BP7	542	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	115239457	115239782	115239623	Y	NA	NA	NA	NA	NA	NA	RP11-761E20.1	156035	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	118819274	118819809	118819515	Y	UBE2A,UBE2A,SEPT6	SEPT6	NA	NA	NA	NA	SEPT6	5524	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	122898767	122899176	122898998	Y	NA	THOC2	NA	NA	NA	NA	THOC2	33861	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	125606277	125607115	125606755	Y	NA	MTND4P24	NA	NA	NA	NA	MTND4P24	1409	CAGE	JHUCS-1	hg19	FANTOM5	3.83279409242654
chrX	128656237	128656454	128656444	Y	NA	SMARCA1,OCRL	NA	NA	NA	NA	SMARCA1	760	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	129118011	129118370	129118054	Y	NA	BCORL1	BCORL1,UTP14A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCORL1	4928	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	129245756	129246153	129246006	Y	NA	ELF4	NA	NA	NA	NA	ELF4	3065	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	129400519	129400680	129400638	Y	NA	ZNF280C	NA	NA	NA	NA	ZNF280C	193	CAGE	JHUCS-1	hg19	FANTOM5	0.833216107049248
chrX	130013053	130013179	130013116	Y	NA	ENOX2	NA	NA	NA	NA	ENOX2	22029	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	132089755	132090160	132089782	Y	NA	HS6ST2	NA	NA	NA	NA	HS6ST2	3263	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	133305762	133306165	133305903	Y	PHF6,CCDC160	NA	NA	NA	NA	NA	PHF6	199118	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	134048475	134048529	134048502	Y	MOSPD1	MOSPD1	NA	NA	NA	NA	MOSPD1	1178	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	135940631	135940874	135940833	Y	HTATSF1	RBMX,RP11-308D16.4	NA	NA	NA	NA	RBMX	20049	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	148334924	148335159	148335044	Y	NA	NA	NA	NA	NA	NA	IDS	278311	CAGE	JHUCS-1	hg19	FANTOM5	0.499929664229549
chrX	148595188	148595518	148595383	Y	IDS,CXorf40A	IDS,CXorf40A,LINC00893	NA	NA	NA	NA	IDS	17952	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	149533685	149533896	149533780	Y	MAMLD1	MAMLD1	NA	NA	NA	NA	MAMLD1	5996	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	149862815	149863170	149863006	Y	MTMR1	MTMR1	NA	NA	NA	NA	MTMR1	3380	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	149863384	149863571	149863479	Y	NA	MTMR1	NA	NA	NA	NA	MTMR1	3949	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	150152595	150153067	150152778	Y	NA	HMGB3,RPL19P21	NA	NA	NA	NA	HMGB3	5613	CAGE	JHUCS-1	hg19	FANTOM5	0.999859328459098
chrX	152127371	152127756	152127434	Y	NA	NA	NA	NA	NA	NA	PNMA3	95010	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	152648727	152649001	152648990	Y	SLC6A8,ZNF275	NA	NA	NA	NA	NA	ZNF275	51114	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	152951257	152951653	152951455	Y	NA	DUSP9,RPL18AP16,BCAP31,ABCD1	NA	NA	NA	NA	SLC6A8	0	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	152980497	152980777	152980637	Y	NA	SLC6A8,BCAP31,ABCD1,PLXNB3	NA	NA	NA	NA	BCAP31	7375	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	153311757	153312308	153312067	Y	NA	IRAK1,MECP2	NA	NA	NA	NA	IRAK1	28326	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	153596671	153598676	153598064	Y	NA	FLNA,EMD,RPL10,TAZ,DNASE1L1	NA	NA	NA	NA	FLNA	2330	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	153755432	153755621	153755566	Y	NA	LAGE3,UBL4A,SLC10A3,FAM3A,IKBKG,G6PD	FAM3A	MCF7,K562	ChIA-PET	22265404	IKBKG	11793	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699
chrX	153947503	153948058	153947921	Y	TEX28,TEX28,EMD,DNASE1L1,TAZ,IKBKG,IKBKG,IKBKG,F8A2,F8A1,LOC100132963,MPP1,GAB3	GAB3,DKC1	NA	NA	NA	NA	GAB3	29800	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	153966358	153966689	153966450	Y	EMD,DNASE1L1,TAZ,IKBKG,IKBKG,IKBKG,F8A2,F8A1,LOC100132963,MPP1,GAB3	GAB3,DKC1	CTAG2	IMR90	Hi-C	24141950	GAB3	11169	CAGE	JHUCS-1	hg19	FANTOM5	0.16664322140985
chrX	154365480	154365529	154365504	Y	NA	MTCP1	NA	NA	NA	NA	MTCP1	8683	CAGE	JHUCS-1	hg19	FANTOM5	0.333286442819699