chr1 1708824 1709349 1708980 Y NA NADK NA NA NA NA NADK 547 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 2140151 2140337 2140252 Y C1orf86 C1orf86 NA NA NA NA C1orf86 1822 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 2162325 2162996 2162733 Y TNFRSF14,SKI C1orf86 NA NA NA NA C1orf86 20166 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 2477415 2477971 2477660 Y NA PANK4,FAM213B NA NA NA NA PANK4 21376 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 2478276 2478817 2478474 Y SKI,PANK4,TNFRSF14 PANK4,FAM213B NA NA NA NA PANK4 22237 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 3128621 3128847 3128817 Y NA NA NA NA NA NA MEGF6 397212 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 3229711 3230157 3229865 Y NA NA NA NA NA NA MEGF6 295902 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 3634737 3634863 3634787 Y WRAP73,TP73 TP73-AS1 NA NA NA NA TP73-AS1 27037 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 7656791 7657175 7656983 Y NA NA NA NA NA NA VAMP3 172154 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 7729547 7729971 7729640 Y NA NA NA NA NA NA VAMP3 99358 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 7764543 7764931 7764717 Y PER3 NA NA NA NA NA VAMP3 64398 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 8121436 8121582 8121497 Y ERRFI1 ERRFI1 RERE,ERRFI1,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 37068 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 8858188 8858497 8858477 Y NA RERE NA NA NA NA RERE 17205 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 8933581 8933925 8933847 Y NA ENO1 NA NA NA NA ENO1 3383 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 9488839 9489227 9489154 Y NA NA SPSB1,SLC25A33,H6PD,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 108314 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 10556105 10556527 10556365 Y NA PEX14,DFFA CASZ1 IMR90 Hi-C 24141950 DFFA 25522 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 12050736 12051137 12050880 Y NPPA,NPPB,MFN2 MFN2,MIIP NA NA NA NA MFN2 12498 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 14027926 14028325 14027982 Y PRDM2,PRDM2,PRDM2 PRDM2 NA NA NA NA PRDM2 3233 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 15666999 15667145 15667070 Y NA NA CTRC,EFHD2 IMR90 Hi-C 24141950 EFHD2 67246 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 16176617 16176801 16176705 Y RSC1A1,C1orf64,SPEN RP11-169K16.8,SPEN NA NA NA NA SPEN 4258 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 16470181 16470602 16470563 Y NA EPHA2 NA NA NA NA EPHA2 9980 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 16696032 16696399 16696223 Y NA FBXO42 NA NA NA NA FBXO42 19083 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 16825333 16826291 16825792 Y NA NA SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 NECAP2 60166 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 17231253 17231704 17231392 Y PADI4,PADI2 NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 104719 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 17240188 17240783 17240515 Y NA NA CROCC K562 ChIA-PET 22265404 ATP13A2 95640 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 20204786 20204981 20204970 Y OTUD3 OTUD3 NA NA NA NA OTUD3 2025 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr1 20993397 20993558 20993485 Y NA PINK1,DDOST NA NA NA NA DDOST 7397 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 21349725 21349786 21349755 Y EIF4G3 RP11-487E1.2 NA NA NA NA RP11-487E1.2 48460 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 21401731 21402159 21402110 Y NA RP11-487E1.2 NA NA NA NA RP11-487E1.2 3485 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 21510856 21510968 21510912 Y ECE1,ECE1 EIF4G3 EIF4G3,DDOST,KIF17,HP1BP3,SH2D5 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EIF4G3 9479 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 21965161 21965473 21965377 Y RAP1GAP NA NA NA NA NA USP48 142626 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 23881180 23881765 23881497 Y NA E2F2,ID3 E2F2 IMR90 Hi-C 24141950 ID3 2520 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 25566618 25566670 25566639 Y NA SYF2 SYF2 MCF7 ChIA-PET 22265404 SYF2 9625 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 26827232 26827869 26827508 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A RP3-476K8.4,HMGN2 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 30291 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 26947342 26948198 26947481 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 72326 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 27024638 27025138 27024825 Y SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV ARID1A NA NA NA NA ARID1A 4114 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 27175784 27176273 27175984 Y C1orf172,AIM1L,ZNF683,RPS6KA1,SFN ZDHHC18,SFN,GPN2,NUDC,GPATCH3 NA NA NA NA SFN 11360 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 27191386 27191927 27191661 Y FAM46B,C1orf172,HMGN2,RPS6KA1,SFN,NUDC,GPN2 ZDHHC18,SFN,GPN2,NUDC,GPATCH3 NA NA NA NA SFN 3753 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 27353661 27353962 27353706 Y TMEM222,MAP3K6,TRNP1 RP11-344H11.4,TRNP1 FAM46B,C1orf172,SLC9A1,WDTC1,WASF2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TRNP1 35463 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 27854575 27854919 27854692 Y SYTL1,FGR,FGR,FGR,FAM76A,C1orf38 WASF2 NA NA NA NA WASF2 39906 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 29503706 29504118 29503928 Y NA SRSF4 NA NA NA NA SRSF4 2381 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 31627566 31627958 31627874 Y SDC3,HCRTR1,NKAIN1 NA SNRNP40,PUM1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 90728 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 33077721 33078012 33077949 Y FNDC5 ZBTB8OS,RBBP4 NA NA NA NA ZBTB8OS 36492 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33182280 33182513 33182368 Y KIAA1522 KIAA1522 SYNC,S100PBP,BSDC1,ZBTB8B,RBBP4,KIAA1522,YARS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA1522 22973 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 33220297 33220575 33220521 Y NA KIAA1522 NA NA NA NA KIAA1522 14811 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33232248 33232565 33232367 Y NA KIAA1522,S100PBP,YARS NA NA NA NA KIAA1522 26762 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33428474 33429020 33428770 Y NA RNF19B NA NA NA NA RNF19B 188 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33433896 33434020 33433958 Y RNF19B RNF19B NA NA NA NA RNF19B 5610 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33457914 33458607 33458311 Y RNF19B RNF19B NA NA NA NA RNF19B 29628 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33500817 33500865 33500842 Y NA AK2,ADC NA NA NA NA AK2 43732 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 33645848 33646140 33645995 Y HPCA,PHC2,TRIM62 TRIM62 NA NA NA NA TRIM62 188 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 34628613 34629024 34628705 Y NA NA NA NA NA NA GJB5 589624 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 36103028 36103196 36103152 Y NA PSMB2 TFAP2E IMR90 Hi-C 24141950 PSMB2 2249 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 38010731 38010979 38010768 Y ZC3H12A,MTF1 MEAF6,SNIP1,RP3-423B22.5,GNL2 MEAF6 IMR90 Hi-C 24141950 SNIP1 6924 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 40561233 40561752 40561648 Y SMAP2,RLF NA NA NA NA NA PPT1 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 40851431 40851768 40851472 Y CAP1,RLF,SMAP2,SMAP2,SMAP2,SMAP2 SMAP2 NA NA NA NA SMAP2 42909 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 40954031 40954187 40954167 Y ZNF684,DEM1 RP11-656D10.3,ZNF684 NA NA NA NA RP11-656D10.3 18146 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 41164800 41165075 41164899 Y ZMPSTE24,SMAP2,SMAP2,SMAP2,ZNF642,DEM1,ZNF684,CITED4,NFYC,NFYC RIMS3,NFYC NA NA NA NA NFYC 9480 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 41501908 41501999 41501966 Y SCMH1 NA NA NA NA NA CITED4 175890 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 42092770 42093067 42092919 Y NA NA NA NA NA NA FOXO6 267176 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 43388597 43388971 43388887 Y NA SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1 33559 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 43405621 43405821 43405630 Y CCDC30,CCDC23,ERMAP,SZT2,SLC2A1 SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1 16709 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 43428386 43429108 43428580 Y CLDN19,CCDC23,ERMAP,SLC2A1 SLC2A1,SLC2A1-AS1 NA NA NA NA SLC2A1-AS1 5666 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 44240162 44240471 44240217 Y ATP6V0B NA NA NA NA NA ST3GAL3 70667 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 44430681 44431060 44430788 Y NA ARTN,RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24 NA NA NA NA DPH2 2612 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 44962677 44962982 44962698 Y NA NA NA NA NA NA RNF220 93811 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 45990749 45991039 45990946 Y NA TESK2,MMACHC,PRDX1,AKR1A1 NA NA NA NA PRDX1 4030 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 47910443 47910471 47910460 Y NA NA NA NA NA NA CMPK1 112974 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 51245588 51245972 51245952 Y NA PHBP12 NA NA NA NA PHBP12 1576 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 51703075 51703494 51703244 Y OSBPL9 RNF11 NA NA NA NA RNF11 3132 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 52193179 52193464 52193255 Y NA NA NA NA NA NA NRD1 149013 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 53702100 53702340 53702220 Y NA CPT2,C1orf123 NA NA NA NA MAGOH 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 54695028 54695502 54695289 Y NA MRPL37,CYB5RL NA NA NA NA CYB5RL 31319 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 54749325 54749366 54749346 Y NA NA CYB5RL,MRPL37 IMR90 Hi-C 24141950 CYB5RL 85616 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 55327144 55327486 55327453 Y NA RP11-67L3.5,DHCR24 NA NA NA NA RP11-67L3.5 23062 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 59229881 59230252 59230003 Y NA JUN NA NA NA NA JUN 17533 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 62416847 62417238 62417043 Y INADL,USP1,KANK4 NA NA NA NA NA INADL 210698 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 68663588 68663867 68663728 Y NA WLS NA NA NA NA WLS 32936 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 70237887 70238124 70238005 Y LRRC7 NA NA NA NA NA LRRC7 205806 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 72749220 72749791 72749447 Y NEGR1 NEGR1 NA NA NA NA NEGR1 2803 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 75094879 75094982 75094978 Y NA NA NA NA NA NA TYW3 101854 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 76645391 76645540 76645467 Y NA NA NA NA NA NA SNORD45A 393817 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 77165935 77166101 77166017 Y NA TPI1P1 ST6GALNAC3 IMR90 Hi-C 24141950 TPI1P1 2461 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 77511618 77511728 77511673 Y NA NA NA NA NA NA RP4-706A16.3 81040 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 78240205 78240392 78240373 Y NA USP33,RP4-706L14.2,FAM73A USP33,ZZZ3,FAM73A IMR90 Hi-C 24141950 RP4-706L14.2 1656 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 78557346 78557710 78557476 Y NA NA NA NA NA NA DNAJB4 114487 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 79154444 79154658 79154581 Y NA IFI44 NA NA NA NA IFI44 40963 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 79215772 79216132 79215819 Y NA NA NA NA NA NA IFI44 102291 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 84710038 84710507 84710127 Y NA NA NA NA NA NA PRKACB 168293 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 85046655 85046705 85046680 Y NA CTBS CTBS MCF7,K562 ChIA-PET 22265404 CTBS 8492 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 85241214 85241288 85241250 Y SAMD13,DNASE2B,DNASE2B,SSX2IP,SSX2IP,LPAR3 NA SSX2IP,GNG5,TTLL7,UOX,MCOLN2,C1orf180,PRKACB,LPAR3,MCOLN3 IMR90 Hi-C 24141950 SSX2IP 86728 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 85695505 85695602 85695542 Y NA SYDE2,C1orf52,BCL10 NA NA NA NA C1orf52 27753 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 88716578 88716942 88716762 Y NA NA NA NA NA NA PKN2 430963 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 89339924 89340210 89340169 Y PKN2 GTF2B NA NA NA NA GTF2B 15417 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 89358212 89358439 89358316 Y PKN2,CCBL2 GTF2B NA NA NA NA GTF2B 2585 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 90274070 90274340 90274210 Y NA LRRC8D GEMIN8P4,ZNF326,LRRC8D IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC8D 10233 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr1 90319744 90319959 90319950 Y NA LRRC8D NA NA NA NA LRRC8D 35171 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 92183243 92183457 92183382 Y NA NA NA NA NA NA RP11-91I11.1 119515 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 92907492 92907607 92907552 Y NA NA NA NA NA NA GLMN 144948 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 93170902 93171289 93171144 Y NA RNU4-59P NA NA NA NA RNU4-59P 6411 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 93806739 93807078 93807070 Y NA DR1 NA NA NA NA DR1 2367 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 94007993 94008357 94008092 Y FNBP1L,BCAR3 RP5-1033H22.2 NA NA NA NA RP5-1033H22.2 47399 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 94204695 94204800 94204748 Y NA NA BCAR3,MIR760,DR1,DNTTIP2 IMR90 Hi-C 24141950 BCAR3 105906 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 94371317 94371601 94371445 Y NA DNTTIP2,GCLM NA NA NA NA GCLM 1365 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 94429275 94429464 94429371 Y GCLM NA ABCA4,ARHGAP29 IMR90 Hi-C 24141950 GCLM 56309 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 100494312 100494735 100494498 Y CDC14A,HIAT1 HIAT1 NA NA NA NA HIAT1 6918 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 100820585 100820838 100820683 Y HIAT1,CDC14A CDC14A NA NA NA NA CDC14A 12001 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 100859593 100859940 100859621 Y HIAT1,CDC14A NA NA NA NA NA CDC14A 51009 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 104641680 104641698 104641690 Y NA NA NA NA NA NA RNPC3 575367 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 109079557 109079899 109079743 Y NA FAM102B NA NA NA NA FAM102B 20812 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 109467804 109468470 109468110 Y GPSM2,WDR47,SORT1,SORT1,PSRC1,CELSR2,CLCC1 AKNAD1,CLCC1 NA NA NA NA AKNAD1 35636 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 109784080 109784425 109784202 Y NA SARS,CELSR2,PSRC1 CELSR2 IMR90 Hi-C 24141950 CELSR2 6216 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 111489179 111489247 111489213 Y NA LRIF1 NA NA NA NA LRIF1 15454 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 113932415 113932748 113932683 Y NA MAGI3 NA NA NA NA MAGI3 1044 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 114236415 114236760 114236542 Y MAGI3 NA NA NA NA NA PHTF1 63351 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 115052481 115052766 115052572 Y BCAS2,TRIM33 TRIM33 NA NA NA NA TRIM33 700 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 117610144 117610413 117610279 Y NA RP11-27K13.3,TTF2 VTCN1,TRIM45 IMR90 Hi-C 24141950 TTF2 9219 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 119401140 119401399 119401296 Y NA NA NA NA NA NA RP11-418J17.1 279620 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 121485082 121485212 121485187 Y NA NA NA NA NA NA EMBP1 225939 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 144533627 144534178 144533764 Y PDE4DIP RNU1-59P PDE4DIP,SEC22B,NOTCH2NL,HIST2H2AB,HIST2H2AC,HIST2H2BE K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNU1-59P 1589 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 145396760 145397198 145397044 Y NA RP11-458D21.1,RNVU1-6 LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNVU1-6 16003 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 146774989 146775112 146775013 Y NA NA NA NA NA NA CHD1L 62698 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 147104963 147105320 147105142 Y NA ACP6 NA NA NA NA ACP6 35298 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 147806841 147807184 147807140 Y NA RNU1-122P NA NA NA NA RNU1-122P 1955 CAGE LC-1F hg19 FANTOM5 5.78401065329647 chr1 148000699 148000802 148000795 Y NA RNVU1-13 NA NA NA NA RNVU1-13 8553 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 149222771 149223127 149223106 Y NA RNVU1-17 NBPF10,SEC22B,NBPF15 MCF7 ChIA-PET 22265404 RNVU1-17 30502 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 149820361 149820952 149820609 Y NA HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB NA NA NA NA HIST2H2AA4 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 149821015 149821647 149821349 Y NA HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB NA NA NA NA HIST2H2AA4 372 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 150185878 150186128 150186012 Y HIST2H2AC,VPS45,RPRD2,ANP32E ANP32E,RNU2-17P NA NA NA NA ANP32E 20376 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 150592182 150592667 150592572 Y CDC42SE1,PLEKHO1,ANP32E,PRPF3,FAM63A,CTSS,MCL1 MCL1,ENSA NA NA NA NA ENSA 7421 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 150600412 150600701 150600561 Y CDC42SE1,BNIPL,PLEKHO1,ANP32E,PRPF3,FAM63A,CTSS,MCL1 ENSA NA NA NA NA ENSA 324 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 150949569 150950014 150949933 Y ZNF687,TNFAIP8L2,SELENBP1,RFX5,POGZ,POGZ,PI4KB,PI4KB,CDC42SE1,MCL1,CTSS,ARNT,SETDB1,LASS2,PRUNE,FAM63A,FAM63A,FAM63A CERS2,FAM63A,PRUNE NA NA NA NA CERS2 4090 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 151255796 151256115 151256047 Y NA PSMD4,ZNF687,PI4KB NA NA NA NA ZNF687 3702 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 151422102 151422465 151422287 Y NA POGZ NA NA NA NA POGZ 7476 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 151486181 151486300 151486231 Y SELENBP1,RORC,CGN CGN,TUFT1 NA NA NA NA CGN 5195 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 151580936 151581099 151580976 Y NA SNX27,RP11-404E16.1 RIIAD1,CELF3 IMR90 Hi-C 24141950 SNX27 1442 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 151918166 151918684 151918434 Y NA S100A10 S100A10,CELF3,THEM4,RORC,S100A11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 S100A10 46182 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 151945068 151945221 151945146 Y TUFT1,S100A11,S100A10 S100A10 NA NA NA NA S100A10 19645 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 152007615 152008057 152007721 Y THEM4 S100A10,S100A11 NA NA NA NA S100A11 10326 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 152116191 152116374 152116281 Y LCE3A NA NA NA NA NA S100A11 97808 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 152140379 152140745 152140485 Y NA NA NA NA NA NA S100A11 121996 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr1 153541018 153541368 153541269 Y PGLYRP3,S100A7L2,S100A6,S100A2,S100A16,S100A14,S100A13,S100A13,S100A13 BX470102.3,S100A6,S100A2,S100A16 NA NA NA NA S100A2 2652 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 153583449 153583810 153583692 Y PGLYRP3,PGLYRP4,S100A7A,S100A7L2,S100A6,S100A2,S100A16,S100A14,S100A13,S100A13 S100A2,CHTOP,S100A13,SNAPIN NA NA NA NA S100A16 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 153584539 153584862 153584750 Y NA S100A2,S100A16,CHTOP,S100A13,SNAPIN NA NA NA NA S100A16 918 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 154405619 154406249 154405788 Y UBAP2L,C1orf43,UBAP2L,IL6R,ADAR IL6R NA NA NA NA IL6R 29950 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 154699087 154699216 154699140 Y NA NA NA NA NA NA ADAR 100612 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 154728745 154728994 154728977 Y NA NA NA NA NA NA ADAR 130270 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 154957258 154957622 154957425 Y NA PMVK,PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B NA NA NA NA FLAD1 3444 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 154973036 154973200 154973120 Y CLK2,ADAR,ADAR,PYGO2,CKS1B,ZBTB7B,DCST1 PBXIP1,PYGO2,SHC1,FLAD1,ADAM15 NA NA NA NA ZBTB7B 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 154973335 154973935 154973656 Y ADAR,ADAR,MTX1,SHC1,ZBTB7B PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15 NA NA NA NA ZBTB7B 208 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 154977099 154977253 154977190 Y ADAR,ADAR,ZBTB7B,DCST1 PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15 NA NA NA NA ZBTB7B 3972 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 155064132 155064186 155064153 Y NA ADAM15,EFNA4,EFNA3,EFNA1,SLC50A1,DPM3 NA NA NA NA EFNA3 29908 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 155098409 155098801 155098460 Y PKLR,PKLR,EFNA4,EFNA1 EFNA1,SLC50A1,DPM3,KRTCAP2 NA NA NA NA EFNA1 473 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 155164183 155164959 155164537 Y NA KRTCAP2,MTX1,THBS3,GBAP1,GBA NA NA NA NA MTX1 11531 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 155830201 155830522 155830413 Y ASH1L,MEX3A,ARHGEF2,ARHGEF2 GON4L,RIT1 ARHGEF2,RXFP4,SNORA42,RIT1,KIAA0907 IMR90 Hi-C 24141950 GON4L 3010 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156073142 156073699 156073532 Y YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,LMNA RAB25,MEX3A,LMNA LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3,MEX3A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNA 22778 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156095033 156095181 156095051 Y MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,RIT1,ARHGEF2,ARHGEF2,LMNA MEX3A,LMNA NA NA NA NA LMNA 44669 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156118146 156118395 156118328 Y MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,RIT1,ARHGEF2,ARHGEF2 SLC25A44 NA NA NA NA SLC25A44 43485 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156133837 156133883 156133860 Y C1orf182,RHBG,HAPLN2,C1orf61,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,MEX3A,PAQR6,PAQR6 SLC25A44,PMF1-BGLAP,PMF1 NA NA NA NA SLC25A44 27997 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156426931 156427503 156427197 Y ARHGEF2,ARHGEF2,LMNA,SLC25A44,PMF1,C1orf182,SH2D2A,RRNAD1,MEF2D MEF2D NA NA NA NA MEF2D 41117 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 156480721 156480806 156480764 Y NA MEF2D NA NA NA NA MEF2D 12101 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156494222 156494678 156494359 Y RRNAD1,MEF2D MEF2D,IQGAP3 NA NA NA NA MEF2D 25602 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 156629760 156630406 156629967 Y PAQR6,PAQR6,C1orf182,CCT3,ISG20L2,GPATCH4,HAPLN2 RP11-284F21.7,NES NA NA NA NA RP11-284F21.7 544 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 160377718 160378261 160377994 Y IGSF9 VANGL2 NA NA NA NA VANGL2 9342 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 160696081 160696317 160696161 Y CD48,FCER1G,CD244,SLAMF7 NA NA NA NA NA RP11-312J18.5 166453 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 160737478 160737714 160737604 Y CD48,FCER1G,CD244,SLAMF7 NA NA NA NA NA RP11-312J18.5 125056 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 160982920 160983992 160983766 Y CD84,CD48,SLAMF7,CD244,NR1I3,FCGR2A,FCER1G,DEDD,DEDD,USF1,ARHGAP30 F11R,TSTD1,USF1 NA NA NA NA F11R 5146 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 160989381 160990254 160990012 Y NDUFS2,ADAMTS4,F11R F11R,TSTD1,USF1 NA NA NA NA F11R 243 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 161369073 161369991 161369486 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 87026 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 161500608 161500899 161500816 Y USF1,ARHGAP30,FCER1G,FCGR2A,ATF6,HSPA6,FCGR3B,FCGR3A,FCGR3A NA NA NA NA NA DUSP12 216649 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 161582212 161582506 161582417 Y HSPA6,FCGR3A NA NA NA NA NA DUSP12 135042 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 164289956 164290255 164290071 Y NA HMGB3P6 NA NA NA NA HMGB3P6 33749 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 164580985 164581415 164581219 Y NA NA NA NA NA NA PBX1 58164 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 165797615 165798367 165798308 Y UCK2 UCK2,TMCO1 NA NA NA NA TMCO1 2623 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 166828089 166828463 166828188 Y POU2F1,POGK POGK,TADA1 NA NA NA NA TADA1 15101 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 167191021 167191933 167191618 Y NA POU2F1 NA NA NA NA POU2F1 2955 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 167322904 167323093 167323001 Y NA NA NA NA NA NA POU2F1 134838 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 167397572 167397954 167397828 Y CD247 NA NA NA NA NA CREG1 123050 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 167683554 167683813 167683605 Y POU2F1,CREG1 MPZL1 NA NA NA NA MPZL1 4616 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 168355862 168356010 168355936 Y NA NA NA NA NA NA TBX19 107584 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 168368318 168368620 168368438 Y TBX19 NA NA NA NA NA TBX19 120040 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 168440429 168440721 168440575 Y NA NA NA NA NA NA TBX19 192151 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 168961520 168961569 168961544 Y NA NA ATP1B1 MCF7 ChIA-PET 22265404 ATP1B1 111366 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 169443033 169443373 169443298 Y NA SLC19A2,AL021068.1 NA NA NA NA SLC19A2 9868 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 170042588 170042670 170042627 Y C1orf112 KIFAP3 NA NA NA NA KIFAP3 9679 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr1 170604086 170604323 170604205 Y NA NA KIFAP3,GORAB,METTL11B IMR90 Hi-C 24141950 GORAB 104816 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 171712214 171712716 171712399 Y FMO4,PRRC2C VAMP4,METTL13 NA NA NA NA VAMP4 2827 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 172507125 172507604 172507262 Y NA NA NA NA NA NA PIGC 95895 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 172788027 172788361 172788212 Y NA NA CENPL,DARS2,TNFSF4,LOC100506023,RC3H1,SERPINC1,TNFSF18 IMR90 Hi-C 24141950 TNFSF18 229742 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 172920935 172921277 172921095 Y NA NA TNFSF4,LOC100506023,TNFSF18 IMR90 Hi-C 24141950 TNFSF18 96826 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 178995927 178996290 178996175 Y AXDND1,RALGPS2,TOR3A FAM20B NA NA NA NA FAM20B 2988 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 179555221 179555646 179555325 Y TDRD5,TDRD5,TDRD5 NA NA NA NA NA HNRNPA1P54 130771 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 180895607 180895967 180895721 Y NA NA NA NA NA NA STX6 94080 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 181074349 181074924 181074645 Y XPR1,IER5 IER5 NA NA NA NA IER5 18711 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 181998739 181999134 181998891 Y GLUL,GLUL NA ZNF648 MCF7 ChIA-PET 22265404 GLUL 360207 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 182176105 182176350 182176203 Y NA NA CACNA1E IMR90 Hi-C 24141950 GLUL 182991 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 182764012 182764230 182764122 Y GLUL,GLUL,RNASEL,NPL NPL,DHX9 NA NA NA NA NPL 7584 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 183129116 183129507 183129296 Y LAMC2 NA LAMC2 IMR90 Hi-C 24141950 LAMC1 138521 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 183567713 183567879 183567843 Y NCF2,NCF2 ARPC5,RGL1 DKFZP564C196,SMG7,NCF2,LAMC1,NMNAT2,ARPC5,RGL1 IMR90 Hi-C 24141950 ARPC5 35013 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 183578502 183578873 183578650 Y NCF2,NCF2,ARPC5 ARPC5,RGL1 NA NA NA NA ARPC5 24019 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 184033703 184034036 184033838 Y NA TSEN15 NA NA NA NA TSEN15 14892 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 184421485 184421696 184421591 Y NA NA NA NA NA NA C1orf21 67293 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 198128112 198128944 198128293 Y PTPRC,DENND1B NEK7 NA NA NA NA NEK7 4019 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 199711776 199712042 199711895 Y NA NA NR5A2,C1orf98 IMR90 Hi-C 24141950 ZNF281 665142 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 200783735 200784105 200783920 Y NA NA NA NA NA NA C1orf106 74071 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 201139670 201140154 201139905 Y NA TMEM9 KIF21B,IGFN1,LAD1 IMR90 Hi-C 24141950 TMEM9 968 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 201445401 201445412 201445405 Y NAV1 PHLDA3,RP11-134G8.7,CSRP1 NA NA NA NA PHLDA3 9036 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 201494461 201494578 201494476 Y NA RP11-134G8.7,CSRP1 NA NA NA NA CSRP1 17877 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 202003479 202003610 202003599 Y NA ELF3,RP11-465N4.4 NA NA NA NA RP11-465N4.4 25998 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 203101073 203101246 203101163 Y NA NA NA NA NA NA TMEM183A 126559 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 203561987 203562359 203562082 Y BTG2,ZC3H11A ATP2B4 ATP2B4,OPTC,PRELP,FMOD,LAX1 IMR90 Hi-C 24141950 ATP2B4 31330 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 203965652 203965916 203965843 Y NA NA ETNK2,SNRPE,LINC00303,SOX13 IMR90 Hi-C 24141950 SOX13 74327 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 204531285 204531644 204531490 Y MDM4 MDM4 NA NA NA NA MDM4 47774 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 205283024 205283394 205283339 Y RBBP5,NUAK2 NUAK2,SNRPGP10 NA NA NA NA NUAK2 5489 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 205442172 205442546 205442359 Y CNTN2,TMEM81 NA KLHDC8A,NUAK2,MIR135B,LOC284576,LEMD1,CDK18 IMR90 Hi-C 24141950 RNU2-19P 91298 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 208136912 208137268 208137107 Y NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C1orf132 96417 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 209538127 209538433 209538258 Y LAMB3,LAMB3,IRF6,LOC642587 NA MIR205HG MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 MIR205HG 61732 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 209556903 209557123 209556922 Y LAMB3,LAMB3,IRF6,LOC642587 MIR205HG MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 43042 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 209557331 209557442 209557421 Y LAMB3,LAMB3,IRF6,LOC642587 MIR205HG MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 42723 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 209600780 209600928 209600808 Y NA MIR205HG NA NA NA NA MIR205HG 615 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 209601291 209601611 209601405 Y NA MIR205HG NA NA NA NA MIR205HG 1126 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 211035320 211035533 211035504 Y NA NA NA NA NA NA RP11-543B16.1 309286 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 211688648 211688771 211688711 Y NA NA NEK2,RCOR3,TRAF5,LINC00467,RD3,SLC30A1,INTS7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC30A1 61313 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 211786767 211786829 211786805 Y NA SLC30A1 SLC30A1,NEK2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC30A1 36683 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 212291571 212291809 212291658 Y PPP2R5A NA NA NA NA NA RPL21P28 68200 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 212513330 212513719 212513465 Y PPP2R5A,PPP2R5A,TMEM206,TMEM206 NA NA NA NA NA PPP2R5A 56451 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr1 212731490 212732709 212732386 Y NA ATF3 ATF3 K562,MCF7 ChIA-PET 22265404 ATF3 3967 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr1 215741534 215741966 215741880 Y KCTD3 KCTD3 NA NA NA NA KCTD3 2799 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 216938634 216938811 216938777 Y NA NA NA NA NA NA GPATCH2 863613 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 218550674 218551089 218550794 Y NA NA NA NA NA NA RRP15 94045 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 220427006 220427444 220427299 Y NA MORF4L1P1,RAB3GAP2 NA NA NA NA MORF4L1P1 2094 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 220868801 220868862 220868831 Y C1orf115,MOSC2,MOSC1 C1orf115 NA NA NA NA C1orf115 7614 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 221869897 221870257 221870077 Y NA DUSP10 NA NA NA NA DUSP10 43261 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 221882292 221882723 221882499 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 30795 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 221916049 221916599 221916319 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 2531 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 224180261 224180516 224180350 Y NA NA NA NA NA NA FBXO28 119273 CAGE LC-1F hg19 FANTOM5 6.94081278395577 chr1 224690718 224691054 224690869 Y WDR26 NA CNIH3 IMR90 Hi-C 24141950 WDR26 67983 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 226007337 226007385 226007361 Y NA SRP9,EPHX1 NA NA NA NA EPHX1 11543 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 226435130 226435332 226435236 Y PARP1,LIN9,SRP9,PYCR2,H3F3A NA NA NA NA NA LIN9 60238 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 226870398 226870999 226870739 Y ITPKB ITPKB-IT1 NA NA NA NA ITPKB-IT1 9630 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 226890865 226891416 226891300 Y ITPKB ITPKB-IT1,ITPKB NA NA NA NA ITPKB-IT1 30097 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 227976197 227976490 227976208 Y NA NA NA NA NA NA JMJD4 55085 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr1 228651177 228651630 228651444 Y HIST3H2A,HIST3H2BB HIST3H2A,HIST3H2BB,HIST3H2BA,RNF187 RNF187 IMR90 Hi-C 24141950 HIST3H2BA 850 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 228782602 228782886 228782775 Y NA FTH1P2 NA NA NA NA FTH1P2 38276 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 229825145 229825279 229825212 Y NA NA TAF5L,URB2,GALNT2,PGBD5 IMR90 Hi-C 24141950 URB2 65164 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 230889321 230889962 230889601 Y NA NA NA NA NA NA COG2 113086 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 231038131 231038454 231038293 Y COG2,TTC13,GNPAT,C1orf131 C1orf198 NA NA NA NA C1orf198 34796 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 232726243 232726385 232726324 Y NA NA TSNAX-DISC1,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 RNU1-74P 239548 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 232765644 232766127 232765957 Y NA NA TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 RNU1-74P 199806 CAGE LC-1F hg19 FANTOM5 13.4960248576918 chr1 234254353 234254647 234254499 Y NA NA NA NA NA NA RP5-827C21.2 236105 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 234728712 234729023 234728867 Y NA IRF2BP2 NA NA NA NA IRF2BP2 14248 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 234746093 234747674 234747395 Y IRF2BP2 IRF2BP2 NA NA NA NA IRF2BP2 2822 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 235091073 235091332 235091158 Y IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 198919 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 235805098 235806119 235805875 Y LYST,RBM34,ARID4B,ARID4B GNG4 NA NA NA NA GNG4 5935 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 235835688 235836968 235835896 Y NA GNG4 NA NA NA NA GNG4 23634 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 235927486 235927702 235927520 Y NA NA NA NA NA NA GNG4 115432 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 236431064 236431243 236431072 Y LGALS8,ERO1LB ERO1LB NA NA NA NA ERO1LB 12076 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 237007861 237008154 237008008 Y NA NA NA NA NA NA MTR 51251 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 237634251 237634535 237634324 Y NA NA NA NA NA NA RYR2 430746 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr1 240306165 240306375 240306208 Y NA ADH5P3 NA NA NA NA ADH5P3 25080 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 240306412 240306787 240306695 Y NA ADH5P3 NA NA NA NA ADH5P3 24668 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 240306890 240307603 240307416 Y NA ADH5P3 NA NA NA NA ADH5P3 23852 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 240307621 240308162 240308005 Y NA ADH5P3 NA NA NA NA ADH5P3 23293 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr1 240308207 240308537 240308375 Y NA ADH5P3 NA NA NA NA ADH5P3 22918 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 241390681 241391063 241391027 Y RGS7 NA NA NA NA NA RP11-435F13.2 230587 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 242375774 242375872 242375823 Y NA NA NA NA NA NA PLD5 310126 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 243431437 243431793 243431509 Y NA CEP170,SDCCAG8 NA NA NA NA SDCCAG8 14117 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 243997018 243997244 243997154 Y NA AKT3 NA NA NA NA AKT3 15137 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 244210956 244211944 244211575 Y NA NA NA NA NA NA AKT3 198575 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 244505125 244505457 244505330 Y AKT3,AKT3,ADSS NA C1orf100,ADSS,AKT3 IMR90 Hi-C 24141950 ADSS 107979 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 244532902 244533005 244532971 Y NA NA NA NA NA NA ADSS 80431 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr1 244535063 244535306 244535184 Y NA NA NA NA NA NA ADSS 78130 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 244613820 244614139 244614120 Y NA ADSS NA NA NA NA ADSS 384 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 246436053 246436378 246436216 Y SMYD3,SMYD3 NA NA NA NA NA SMYD3 232236 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 246469940 246470214 246470139 Y NA NA NA NA NA NA SMYD3 198400 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 247035132 247035504 247035470 Y CNST,ZNF669,AHCTF1 NA NA NA NA NA AHCTF1 57776 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 247326566 247327229 247326989 Y NA MIR3916 NA NA NA NA MIR3916 36133 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr1 247507326 247507475 247507401 Y NA ZNF496 ZNF670-ZNF695,AHCTF1,ZNF669,ZNF496 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF496 14178 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr1 247763174 247763477 247763326 Y NA NA NA NA NA NA TRIM58 255024 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 431640 432008 431824 Y TUBB8,ZMYND11,DIP2C NA NA NA NA NA ZMYND11 253235 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 4394953 4395258 4395067 Y NA NA LOC338588,LOC100216001,PITRM1,LOC100507034,KLF6 IMR90 Hi-C 24141950 AKR1E2 431563 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 5113786 5114179 5114065 Y AKR1C1,AKR1C2,AKR1C3 AKR1C3 NA NA NA NA AKR1C3 38240 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 5333644 5334212 5333929 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 118302 CAGE LC-1F hg19 FANTOM5 7.32641349417553 chr10 5334474 5334640 5334544 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 117874 CAGE LC-1F hg19 FANTOM5 6.16961136351624 chr10 5336164 5336286 5336241 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 116228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 5504427 5504665 5504478 Y NA NA NA NA NA NA NET1 51913 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 6183239 6183522 6183310 Y NA PFKFB3 NA NA NA NA PFKFB3 1359 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 6243287 6243821 6243659 Y PFKFB3,PFKFB3 NA NA NA NA NA PFKFB3 58406 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 6298563 6298686 6298625 Y NA NA NA NA NA NA PFKFB3 113682 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 6443408 6443712 6443449 Y PFKFB3,PFKFB3 NA IL2RA,PFKFB3,LOC399715,FBXO18,RBM17,IL15RA,PRKCQ IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRKCQ 176551 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 7583205 7583490 7583242 Y NA NA NA NA NA NA KIN 244500 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 8662161 8662543 8662250 Y NA NA NA NA NA NA GATA3 568594 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 11983561 11983569 11983563 Y NA NA NA NA NA NA UPF2 99600 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 12490797 12491318 12490959 Y SEC61A2,CAMK1D NA NA NA NA NA CAMK1D 101316 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 12747516 12747872 12747694 Y NA NA NA NA NA NA CAMK1D 358035 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 13924181 13924825 13924574 Y NA NA NA NA NA NA PRPF18 297254 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 21317807 21317920 21317859 Y C10orf113 NA NA NA NA NA MLLT10 503174 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 21386477 21386751 21386615 Y NA NA NA NA NA NA MLLT10 434343 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 22025175 22025497 22025336 Y NA NA NA NA NA NA RN7SKP37 194575 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 22555688 22555894 22555791 Y NA COMMD3 NA NA NA NA COMMD3 47009 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 22629825 22629981 22629966 Y DNAJC1 COMMD3,BMI1,SPAG6 NA NA NA NA SPAG6 2418 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 22817226 22817294 22817260 Y EBLN1 NA NA NA NA NA PIP4K2A 184190 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 24417752 24418035 24417894 Y NA NA NA NA NA NA KIAA1217 436077 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 24925603 24925785 24925693 Y ARHGAP21 NA NA NA NA NA ARHGAP21 84812 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 25640550 25640656 25640570 Y NA NA NA NA NA NA GPR158 178559 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 29010919 29011116 29010957 Y NA BAMBI LYZL1,BAMBI IMR90 Hi-C 24141950 BAMBI 46648 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 29228763 29229094 29228981 Y NA NA BAMBI,LOC100507605,LYZL1 IMR90 Hi-C 24141950 BAMBI 264492 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 31015875 31016223 31016049 Y NA NA ZEB1,ARHGAP12,ZEB1-AS1,KIF5B,ZNF438,ERGIC3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 MAP3K8 295009 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 31093694 31093701 31093698 Y NA NA ARHGAP12,ZEB1,ZNF438 IMR90 Hi-C 24141950 ZNF438 225165 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 31192523 31192722 31192556 Y NA NA NA NA NA NA ZNF438 126144 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 32048872 32049424 32049213 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166318 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr10 32579146 32579267 32579207 Y NA NA NA NA NA NA EPC1 86459 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 32621222 32621521 32621374 Y ARHGAP12,CCDC7,C10orf68,EPC1 EPC1 NA NA NA NA EPC1 44205 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 34907489 34907514 34907502 Y NA RP11-8L18.3 NA NA NA NA RP11-8L18.3 43515 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 35028968 35029134 35029048 Y NA NA NA NA NA NA PARD3 73119 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 35102675 35103059 35102787 Y NA PARD3 NA NA NA NA PARD3 422 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 43249248 43249682 43249506 Y NA BMS1 NA NA NA NA BMS1 26567 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 43600895 43601120 43601049 Y RASGEF1A CSGALNACT2 NA NA NA NA CSGALNACT2 30814 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 44100382 44100859 44100681 Y CSGALNACT2 CAP1P2,ZNF485,ZNF32 NA NA NA NA ZNF485 527 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 44185624 44185942 44185694 Y NA ZNF32 NA NA NA NA ZNF32 43320 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 50742859 50743547 50743006 Y NA PGBD3,ERCC6 NA NA NA NA PGBD3 1539 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 52081951 52082279 52082036 Y FAM21A NA NA NA NA NA DYNC1I2P1 59213 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 52385542 52385659 52385602 Y NA SGMS1 NA NA NA NA SGMS1 2619 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 60674120 60674133 60674127 Y BICC1 NA NA NA NA NA PHYHIPL 260217 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 62185134 62185430 62185353 Y NA NA NA NA NA NA CDK1 350659 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 63753079 63753613 63753266 Y ARID5B NA NA NA NA NA RTKN2 272853 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 64300187 64300318 64300222 Y EGR2,EGR2 NA NA NA NA NA ADO 262198 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 65269177 65269730 65269542 Y NA JMJD1C,REEP3 REEP3,JMJD1C,LOC84989 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 REEP3 9393 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 66294853 66295258 66294869 Y NA NA NA NA NA NA ANXA2P3 288071 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 69658139 69658146 69658142 Y HNRNPH3,SIRT1,SIRT1 SIRT1 HERC4 IMR90 Hi-C 24141950 SIRT1 15712 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 70088080 70088572 70088236 Y SIRT1,PBLD,HNRNPH3 HNRNPH3,PBLD NA NA NA NA HNRNPH3 359 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 70884620 70884824 70884718 Y DDX21,SUPV3L1,SRGN VPS26A NA NA NA NA VPS26A 3352 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 72592079 72592231 72592146 Y SGPL1 SGPL1 NA NA NA NA SGPL1 18362 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 73526437 73526878 73526654 Y CDH23,C10orf54,C10orf105 NA NA NA NA NA PSAP 82248 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 73620184 73620641 73620392 Y DNAJB12,DDIT4,C10orf54,PSAP PSAP PSAP,C10orf54,CDH23,CHST3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PSAP 11058 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 73745585 73745830 73745708 Y NA CHST3 NA NA NA NA CHST3 23462 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 73946489 73946835 73946688 Y NA RP11-570G20.1,ANAPC16,ASCC1 NA NA NA NA RP11-570G20.1 864 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 74056833 74058104 74057179 Y PSAP,DDIT4,DNAJB12 DDIT4 NA NA NA NA DDIT4 25155 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 74174604 74174793 74174677 Y NA NA NA NA NA NA DNAJB12 61616 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 75022023 75022098 75022060 Y NA DNAJC9,MRPS16,RP11-152N13.5 NA NA NA NA RP11-152N13.5 11474 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 75211378 75211476 75211427 Y NA ANXA7,RP11-345K20.2,RP11-137L10.6,PPP3CB NA NA NA NA RP11-345K20.2 30924 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 75648556 75649146 75648996 Y ANXA7,NDST2 CAMK2G SEC24C,FUT11,LOC100507331,CAMK2G,NDST2,KIAA0913,VCL,PLAU,C10orf55,AP3M1,ADK IMR90 Hi-C 24141950 CAMK2G 16213 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 76053029 76053199 76053114 Y NA NA NA NA NA NA ADK 144069 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 76985148 76985510 76985329 Y NA VDAC2,COMTD1,HMGA1P5 NA NA NA NA COMTD1 8278 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 79685177 79685609 79685373 Y NA DLG5 NA NA NA NA DLG5 799 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 81077317 81078576 81077648 Y ZMIZ1,PPIF PPIF NA NA NA NA PPIF 26649 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 82224459 82224735 82224582 Y NA TSPAN14 NA NA NA NA TSPAN14 12537 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 88470805 88471213 88471023 Y NA LDB3,BMPR1A NA NA NA NA BMPR1A 43194 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 93432082 93432315 93432239 Y NA PPP1R3C LOC100188947,HECTD2,TNKS2,RPP30,PPP1R3C IMR90 Hi-C 24141950 PPP1R3C 41271 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 94351391 94351691 94351485 Y CPEB3 IDE,KIF11 NA NA NA NA KIF11 348 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 95198614 95198817 95198708 Y NA MYOF NA NA NA NA MYOF 41257 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 95201631 95201931 95201645 Y NA MYOF NA NA NA NA MYOF 38143 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 95224699 95224811 95224754 Y NA MYOF,CEP55 NA NA NA NA MYOF 15263 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 96943397 96943661 96943560 Y SORBS1,SORBS1 NA C10orf129,SORBS1 IMR90 Hi-C 24141950 PDLIM1 105120 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 98029055 98029227 98029121 Y NA NA NA NA NA NA ZNF518A 141583 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 99449337 99449738 99449607 Y C10orf28,RRP12,PI4K2A AVPI1,MARVELD1,ZFYVE27 NA NA NA NA AVPI1 4257 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 100019738 100019959 100019849 Y C10orf28 NA NA NA NA NA PYROXD2 152982 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 100020230 100020246 100020237 Y NA NA NA NA NA NA PYROXD2 152695 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 101537826 101537964 101537919 Y ABCC2 COX15,ABCC2 NA NA NA NA ABCC2 2525 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 101780024 101780319 101780173 Y CUTC,WNT8B DNMBP DNMBP MCF7 ChIA-PET 22265404 DNMBP 12348 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 102488726 102488983 102488821 Y NA NA PAX2 IMR90 Hi-C 24141950 FAM178A 181343 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 103453403 103453880 103453587 Y LDB1,BTRC,MGEA5 FBXW4 NA NA NA NA FBXW4 351 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 103877464 103877788 103877718 Y MGEA5,TMEM180,SUFU,PSD,FBXL15,C10orf76,LDB1 LDB1,PPRC1,NOLC1 NA NA NA NA LDB1 422 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 104401686 104402330 104401988 Y NA NA NA NA NA NA TRIM8 0 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 105001224 105001453 105001331 Y C10orf32,NT5C2 INA INA,PCGF6,NT5C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INA 33467 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 105001544 105001968 105001663 Y C10orf32,NT5C2 INA INA,PCGF6,NT5C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INA 32952 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 105630915 105631032 105630972 Y GSTO2,COL17A1,SH3PXD2A OBFC1 NA NA NA NA OBFC1 44931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 105650011 105650288 105650237 Y GSTO2,GSTO1,MEIR5,MEIR5,COL17A1,SLK OBFC1 SH3PXD2A IMR90 Hi-C 24141950 OBFC1 25675 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr10 112207134 112207519 112207380 Y NA DUSP5 DUSP5 IMR90 Hi-C 24141950 DUSP5 48077 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 116255200 116255589 116255576 Y NA NA NA NA NA NA ABLIM1 187173 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 121415317 121415432 121415359 Y GRK5,BAG3 RP11-179H18.5,BAG3 NA NA NA NA BAG3 6435 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr10 123268724 123269025 123268893 Y FGFR2,FGFR2,FGFR2,FGFR2 NA NA NA NA NA FGFR2 86947 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 123822805 123823045 123822957 Y ATE1,DMBT1 NA NA NA NA NA NSMCE4A 90073 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 125730230 125730378 125730329 Y NA NA NA NA NA NA CHST15 120828 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 126389218 126389354 126389286 Y NA FAM53B NA NA NA NA FAM53B 41484 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 126417079 126417297 126417241 Y FAM53B FAM53B NA NA NA NA FAM53B 13541 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 127714877 127714997 127714888 Y NA NA NA NA NA NA FANK1 131769 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 127776352 127776546 127776449 Y NA NA FANK1 IMR90 Hi-C 24141950 FANK1 193244 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 131765501 131765764 131765633 Y NA NA NA NA NA NA GLRX3 166899 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 133879247 133879524 133879406 Y NA NA BNIP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BNIP3 85812 CAGE LC-1F hg19 FANTOM5 4.24160781241741 chr10 134001237 134001611 134001351 Y NA DPYSL4 NA NA NA NA DPYSL4 2833 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 134208745 134209013 134208865 Y NA PWWP2B NA NA NA NA PWWP2B 73 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr10 134260341 134260546 134260485 Y C10orf91 NA NA NA NA NA PWWP2B 51669 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr11 1847921 1848122 1848046 Y KRTAP5-3 NA H19 MCF7 ChIA-PET 22265404 AC068580.7 50303 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 2502121 2502438 2502223 Y KCNQ1 NA NA NA NA NA TSSC4 82403 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 3021368 3021548 3021402 Y NA NAP1L4,RNU1-91P NAP1L4 IMR90 Hi-C 24141950 NAP1L4 9761 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 3035655 3035952 3035816 Y MRGPRG NAP1L4,RNU1-91P,CARS NA NA NA NA NAP1L4 24048 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 3443739 3443990 3443855 Y NA ZNF195 NA NA NA NA ZNF195 45291 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 4129900 4130200 4130091 Y OR52M1,OR52K2,OR52K1,C11orf40,OR52I1 RRM1 NA NA NA NA RRM1 15963 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 5953770 5953923 5953776 Y NA TRIM5 NA NA NA NA TRIM5 3926 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 7426320 7426390 7426356 Y SYT9 NA NA NA NA NA CYB5R2 270063 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 8723535 8723638 8723587 Y STK33 RPL27A NA NA NA NA RPL27A 21577 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 8730669 8730993 8730843 Y NA RPL27A NA NA NA NA RPL27A 28711 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 9385760 9386326 9386092 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 17843 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr11 9422844 9423055 9422950 Y NRIP3,IPO7 IPO7,SNORA23 NA NA NA NA IPO7 18675 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 9590279 9590748 9590469 Y WEE1,WEE1 WEE1 LOC644656,ZNF143 K562,MCF7 ChIA-PET 22265404 WEE1 2480 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 9635436 9636077 9635827 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 42208 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 9787824 9788205 9787956 Y NA NA NA NA NA NA SWAP70 104200 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 14874249 14874576 14874405 Y CYP2R1 CYP2R1 NA NA NA NA CYP2R1 37222 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 16411231 16411535 16411524 Y NA NA NA NA NA NA C11orf58 221144 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 17008586 17008989 17008853 Y PLEKHA7 RP11-466H18.1,OR7E14P,PLEKHA7 NA NA NA NA RP11-466H18.1 14026 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 19649981 19650160 19650072 Y NAV2 NA NA NA NA NA E2F8 388814 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 22435602 22435738 22435670 Y NA NA NA NA NA NA AC103801.2 209122 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 27217576 27217737 27217656 Y NA RP11-1L12.3 LGR4 IMR90 Hi-C 24141950 RP11-1L12.3 21923 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 28128920 28129110 28128941 Y METTL15 METTL15,KIF18A NA NA NA NA KIF18A 1065 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 32915475 32916456 32915913 Y NA QSER1 NA NA NA NA QSER1 2751 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr11 33074022 33074030 33074026 Y NA DEPDC7,TCP11L1 NA NA NA NA TCP11L1 15059 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 33427027 33427076 33427050 Y NA RP1-130L23.1 C11orf41,C11orf91 IMR90 Hi-C 24141950 RP1-130L23.1 4265 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr11 34393112 34393337 34393189 Y ABTB2 RP1-145M24.1,ABTB2 ABTB2,ELF5,NAT10,CAT IMR90 Hi-C 24141950 ABTB2 15557 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 34426692 34426969 34426750 Y ABTB2 ABTB2,CAT ABTB2,NAT10,CAT IMR90 Hi-C 24141950 CAT 31503 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 35186946 35187176 35187019 Y CD44 RP4-607I7.1,CD44,RP1-68D18.2 NA NA NA NA CD44 28529 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 35188303 35189153 35188420 Y CD44 RP4-607I7.1,CD44,RP1-68D18.2 NA NA NA NA CD44 29886 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 35571458 35571651 35571555 Y PAMR1 NA PAMR1,PRR5L,SLC1A2,FJX1,TRIM44,LDLRAD3,COMMD9 IMR90 Hi-C 24141950 TRIM44 110702 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 36412549 36413219 36412775 Y COMMD9,PRR5L,PRR5L NA NA NA NA NA PRR5L 96711 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 43569506 43569887 43569721 Y C11orf96 HSD17B12,MIR129-2 NA NA NA NA HSD17B12 6099 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 43779324 43779404 43779364 Y NA NA NA NA NA NA ALKBH3 120957 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 44758780 44759166 44758916 Y NA TSPAN18 TSPAN18,PRDM11,CD82,TP53I11,SYT13 IMR90 Hi-C 24141950 TSPAN18 12765 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 45047638 45048022 45047830 Y TSPAN18 NA NA NA NA NA TP53I11 76798 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 45201958 45202605 45202216 Y NA NA NA NA NA NA RP11-430H10.1 172317 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr11 46264726 46265198 46265009 Y NA NA DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DGKZ 87257 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 47573563 47574025 47573747 Y NR1H3,SPI1,PTPRJ,CELF1,CELF1,CELF1 NDUFS3,PTPMT1,CELF1,KBTBD4 NA NA NA NA NDUFS3 10863 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 47789923 47790126 47789984 Y NA FNBP4 NA NA NA NA FNBP4 2928 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 47844695 47845036 47844861 Y NA NUP160 NA NA NA NA NUP160 23071 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 48004294 48004631 48004323 Y CELF1,CELF1,CELF1,CELF1,FNBP4,PTPRJ PTPRJ NA NA NA NA PTPRJ 4181 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 48077375 48077584 48077563 Y FNBP4,PTPRJ NA NA NA NA NA PTPRJ 77262 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 60753567 60754105 60753691 Y SDHAF2,CD5,CD6 NA NA NA NA NA TMEM132A 63632 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 61739990 61740514 61740301 Y NA FTH1 NA NA NA NA FTH1 6858 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 62625165 62625549 62625272 Y TUT1,METTL12,HNRNPUL2,SLC3A2 STX5,RP11-727F15.9,WDR74,SNHG1,SLC3A2 NA NA NA NA SLC3A2 3647 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 63685258 63686079 63685609 Y NA RCOR2,NAA40 NA NA NA NA RCOR2 2942 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 64102702 64102834 64102750 Y NA ESRRA,TRMT112,PRDX5,RPS6KA4 NA NA NA NA PRDX5 19142 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 64140304 64140795 64140552 Y RCOR2,NAA40,GPR137,KCNK4,NRXN2,NRXN2,CDC42BPG RPS6KA4 NA NA NA NA RPS6KA4 15684 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr11 65185589 65187086 65186338 Y NA SLC25A45,FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 1159 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 65187297 65188198 65187553 Y BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 SLC25A45,FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 47 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 65239550 65239870 65239751 Y BATF2,FAU,CDC42EP2,KCNK7,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 AP000769.1,MALAT1 TIGD3,SCYL1 K562 ChIA-PET 22265404 AP000769.1 18822 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 65244638 65245303 65245021 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 AP000769.1,MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 17930 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr11 65261229 65261625 65261527 Y CDC42EP2 AP000769.1,MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 1608 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 65264635 65265953 65265057 Y NA AP000769.1,MALAT1,SCYL1 NA NA NA NA MALAT1 1402 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 65273934 65274467 65274182 Y NA MALAT1,SCYL1,LTBP3 LTBP3,SCYL1 IMR90 Hi-C 24141950 MALAT1 10701 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 65420425 65420654 65420491 Y TIGD3,SLC25A45,MAP3K11,SNX32,PACS1,GAL3ST3,CTSW,SIPA1,SIPA1,KAT5 MAP3K11,PCNXL3,SIPA1,RELA NA NA NA NA RELA 7911 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 65666492 65667203 65666864 Y RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B MUS81,CFL1,EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1 NA NA NA NA FOSL1 448 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 65739201 65739551 65739464 Y NA SART1,BANF1,EIF1AD NA NA NA NA SART1 12041 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 65894211 65894464 65894385 Y NA NA RAB1B,KLC2 IMR90 Hi-C 24141950 PACS1 58377 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 66659730 66659912 66659812 Y CLCF1,RBM4 LRFN4 NA NA NA NA LRFN4 37612 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr11 66738286 66738892 66738415 Y POLD4,CLCF1,CLCF1,KDM2A,ADRBK1 PC PC,SYT12,RHOD IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PC 14439 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 67139742 67140272 67140082 Y NA POLD4,AP003419.11,RAD9A,PPP1CA NA NA NA NA AP003419.11 687 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 68819655 68820046 68819874 Y NA TPCN2 NA NA NA NA TPCN2 5290 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 69965939 69966135 69966116 Y NA NA NA NA NA NA FADD 81134 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 71990969 71991411 71991180 Y NA NA NA NA NA NA INPPL1 58224 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 73036125 73036359 73036193 Y NA RELT NA NA NA NA RELT 48950 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 73490242 73490316 73490279 Y NA RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 6045 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 74465903 74466299 74466070 Y POLD3,RNF169 RP11-864N7.2,RNF169 XRRA1 IMR90 Hi-C 24141950 RNF169 7990 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 76480789 76480971 76480905 Y NA TSKU,RP11-21L23.3 B3GNT6,TSKU,GUCY2E,ACER3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSKU 10324 CAGE LC-1F hg19 FANTOM5 8.86881633505459 chr11 76802149 76802401 76802277 Y NA CAPN5 NA NA NA NA CAPN5 26170 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 76898493 76898545 76898519 Y NA NA NA NA NA NA CAPN5 122514 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 78544305 78544548 78544426 Y GAB2 NA NA NA NA NA NARS2 260386 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 79148505 79148822 79148543 Y NA NA NA NA NA NA NARS2 864586 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 79149040 79149340 79149145 Y ODZ4 NA NA NA NA NA NARS2 865121 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 83278002 83278167 83278160 Y NA NA NA NA NA NA CCDC90B 282552 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 86452946 86453377 86453076 Y NA PRSS23 PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 46724 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 88071526 88071793 88071707 Y NA CTSC NA NA NA NA CTSC 2571 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 89144511 89144785 89144648 Y NA NA NA NA NA NA CHORDC1 809747 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 91980380 91980674 91980445 Y FAT3 NA NA NA NA NA SLC36A4 948456 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 93446176 93446355 93446266 Y NA SCARNA9,C11orf54 NA NA NA NA SCARNA9 6324 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 94882788 94883137 94883023 Y NA RP11-712B9.2 NA NA NA NA RP11-712B9.2 1085 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr11 100010094 100010272 100010183 Y NA NA NA NA NA NA ARHGAP42 546112 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 102042993 102043398 102043047 Y C11orf70,TMEM123,YAP1,YAP1 NA NA NA NA NA YAP1 63801 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 103281581 103281752 103281672 Y NA RP11-37O16.8 NA NA NA NA RP11-37O16.8 3196 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 103321873 103321933 103321886 Y NA RP11-37O16.8 NA NA NA NA RP11-37O16.8 43488 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 104747761 104748329 104748068 Y CARD17,CASP5,CARD16,CASP4,CASP4 NA NA NA NA NA CASP4 89834 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 107187292 107187599 107187573 Y NA NA NA NA NA NA CWF19L2 138973 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 109358669 109358908 109358789 Y NA NA DDX10 IMR90 Hi-C 24141950 ZC3H12C 603179 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 111692318 111692670 111692505 Y NA NA PPP2R1B IMR90 Hi-C 24141950 C11orf1 54989 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 113219738 113219923 113219793 Y NA TTC12 NA NA NA NA TTC12 36487 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 114037766 114038216 114037805 Y NA NA NA NA NA NA RBM7 230536 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 114309073 114309125 114309098 Y NA RBM7,C11orf71,REXO2 NA NA NA NA REXO2 965 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 115092334 115092489 115092415 Y NA NA NA NA NA NA CADM1 281186 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 116061103 116061309 116061204 Y NA NA CADM1,FAM55B IMR90 Hi-C 24141950 BUD13 580395 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 118663387 118663780 118663691 Y NA DDX6 NA NA NA NA DDX6 3529 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr11 118782911 118783378 118783221 Y SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84 MIR4492,UPK2,BCL9L NA NA NA NA MIR4492 3494 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr11 119564027 119564313 119564171 Y TRIM29,PVRL1 PVRL1 NA NA NA NA PVRL1 33481 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 122072667 122072944 122072770 Y NA NA NA NA NA NA UBASH3B 451439 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 124552795 124553089 124552942 Y OR8B4,C11orf61 SPA17,SIAE NA NA NA NA SIAE 10514 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 124638889 124639135 124639012 Y NA NRGN,RP11-677M14.3 NA NA NA NA RP11-677M14.3 11864 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 125665065 125665247 125665168 Y NA NA NA NA NA NA HYLS1 86262 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 126210041 126210184 126210131 Y NA DCPS,RP11-712L6.5,ST3GAL4 NA NA NA NA ST3GAL4 13351 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 129242787 129242887 129242837 Y NA NA NA NA NA NA NFRKB 520598 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 132940132 132940357 132940242 Y OPCML NA NA NA NA NA IGSF9B 884523 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr11 133920876 133920983 133920947 Y B3GAT1,SPATA19,JAM3 RP11-713P17.3,JAM3 NA NA NA NA JAM3 15837 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr11 134225265 134225400 134225316 Y NA GLB1L2 NA NA NA NA GLB1L2 25497 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 860254 860664 860544 Y RAD52,NINJ2,WNK1 WNK1 NA NA NA NA WNK1 495 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 1157508 1157869 1157627 Y ERC1 NA NA NA NA NA ERC1 59833 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 1770869 1771337 1771069 Y LRTM2,ADIPOR2 ADIPOR2 NA NA NA NA ADIPOR2 24403 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 2144277 2144357 2144308 Y LRTM2 DCP1B CACNA1C,MIR3649,CACNA2D4,ADIPOR2,DCP1B,LOC100652846,WNT5B IMR90 Hi-C 24141950 DCP1B 32576 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 4140182 4140815 4140542 Y CCND2,PARP11 NA CCND2 IMR90 Hi-C 24141950 PARP11 159574 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 4245075 4245501 4245252 Y PARP11,C12orf4 NA CCND2 IMR90 Hi-C 24141950 C12orf5 182870 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 6325035 6325634 6325452 Y NA CD9 NA NA NA NA CD9 18154 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 6335136 6335793 6335267 Y SCNN1A CD9 NA NA NA NA CD9 28255 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr12 6445143 6445640 6445507 Y VAMP1,TAPBPL,CHD4,CD4,CD4,TNFRSF1A PLEKHG6,TNFRSF1A,LTBR,SCNN1A NA NA NA NA TNFRSF1A 3640 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 6539566 6540029 6539921 Y NA RP1-102E24.9,CD27-AS1,TAPBPL,VAMP1 NA NA NA NA RP1-102E24.9 5635 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 6962211 6962407 6962304 Y GAPDH,COPS7A,COPS7A,COPS7A,COPS7A,LEPREL2,USP5,USP5,TPI1,TPI1 LEPREL2,CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2 NA NA NA NA USP5 2919 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr12 7034730 7034838 7034794 Y ACSM4,PTMS,PHB2,PHB2,EMG1,USP5,USP5,SPSB2,SPSB2,ATN1 SPSB2,ENO2,ATN1,C12orf57,RNU7-1,EMG1,U47924.27,PHB2 NA NA NA NA ATN1 3104 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 7058106 7058233 7058157 Y ACSM4,VAMP1,ZNF384,ZNF384,CD4,CD4,LRRC23,PTPN6 ENO2,ATN1,C12orf57,RNU7-1,EMG1,U47924.27,PHB2,C1S NA NA NA NA RNU7-1 7127 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 7592182 7592797 7592685 Y PEX5,NANOG NA NA NA NA NA PEX5 252901 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr12 8123169 8123746 8123395 Y CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC2A3 36298 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 9491229 9491519 9491373 Y NA NA C12orf33,LOC144571 MCF7 ChIA-PET 22265404 PTMAP4 100302 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 10833157 10833219 10833190 Y NA STYK1 NA NA NA NA STYK1 8240 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 11806275 11806670 11806607 Y BCL2L14,ETV6 ETV6 NA NA NA NA ETV6 5487 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 11919566 11919967 11919675 Y BCL2L14,ETV6 NA NA NA NA NA ETV6 118778 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 12032964 12033203 12033084 Y BCL2L14 NA NA NA NA NA RP11-267J23.4 228894 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 12504083 12504386 12504252 Y BCL2L14,MANSC1 MANSC1,LOH12CR1 NA NA NA NA MANSC1 2608 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 12663035 12663537 12663259 Y BCL2L14,DUSP16 DUSP16 LOH12CR1 IMR90 Hi-C 24141950 DUSP16 49780 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 13251023 13251431 13251083 Y EMP1 NA NA NA NA NA KIAA1467 55805 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 13376628 13377027 13376828 Y NA EMP1 NA NA NA NA EMP1 28978 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 15514461 15514838 15514654 Y PTPRO PTPRO,RERG NA NA NA NA RERG 14852 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 16553699 16554214 16553898 Y NA NA NA NA NA NA MGST1 55623 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 19566135 19566181 19566158 Y NA AEBP2 NA NA NA NA AEBP2 11156 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 19932429 19932596 19932501 Y NA NA PDE3A IMR90 Hi-C 24141950 RNU1-146P 57060 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 21625286 21625603 21625493 Y NA PYROXD1,RECQL,GOLT1B NA NA NA NA RECQL 27000 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 22428776 22428931 22428867 Y NA NA NA NA NA NA CMAS 231668 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 22562588 22562819 22562739 Y NA NA NA NA NA NA ETNK1 213190 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 22779557 22779668 22779574 Y NA ETNK1 NA NA NA NA ETNK1 3548 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 24396980 24397002 24396991 Y NA NA NA NA NA NA SOX5 295014 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 24673435 24673806 24673663 Y SOX5 RP11-444D3.1 NA NA NA NA RP11-444D3.1 39718 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 25178753 25179224 25179042 Y NA NA CASC1 IMR90 Hi-C 24141950 LYRM5 166926 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 25402760 25403150 25403054 Y LRMP,CASC1,KRAS KRAS NA NA NA NA KRAS 890 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 25445837 25446089 25445962 Y BCAT1 KRAS NA NA NA NA KRAS 43967 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 26440996 26441185 26441046 Y NA NA BHLHE41,ITPR2,SSPN IMR90 Hi-C 24141950 RASSF8 331034 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 31469690 31470116 31469962 Y NA FAM60A NA NA NA NA FAM60A 7876 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 31902136 31902566 31902240 Y C12orf35,AMN1,H3F3C AMN1,RP11-467L13.5,H3F3C AMN1 K562 ChIA-PET 22265404 RP11-467L13.5 3085 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 32263319 32263494 32263407 Y NA BICD1 NA NA NA NA BICD1 5550 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 33044985 33045279 33045082 Y NA PKP2 NA NA NA NA PKP2 2495 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 39816699 39816988 39816844 Y NA KIF21A NA NA NA NA KIF21A 18204 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 42825856 42826146 42826103 Y YAF2,YAF2,YAF2 NA NA NA NA NA ZCRB1 107936 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 44522730 44522871 44522801 Y NA NA NA NA NA NA TMEM117 294960 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 45820263 45820702 45820515 Y NA NA NA NA NA NA PLEKHA8P1 212439 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 46887386 46887956 46887679 Y NA NA SLC38A2,SLC38A4,SLC38A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-96H19.1 111924 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 46947043 46947401 46947166 Y SLC38A2 NA SLC38A2 IMR90 Hi-C 24141950 RP11-96H19.1 171581 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 47310900 47311079 47310914 Y NA NA SLC38A1,SLC38A2,SLC38A4 IMR90 Hi-C 24141950 RP11-96H19.1 535438 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 47612205 47612473 47612375 Y FAM113B NA NA NA NA NA RPAP3 485371 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 49508076 49508435 49508256 Y NA RHEBL1,LMBR1L,RP11-386G11.10,TUBA1B NA NA NA NA LMBR1L 5393 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 50058663 50058846 50058755 Y NA TMBIM6,FMNL3 NA NA NA NA TMBIM6 40662 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 51180627 51180997 51180727 Y SMAGP ATF1 TMPRSS12 IMR90 Hi-C 24141950 ATF1 25134 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 52539319 52539712 52539621 Y KRT84,KRT80,KRT6A,KRT5 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 44072 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 52542210 52542726 52542513 Y KRT80,KRT7,KRT6B,KRT6A,KRT5,C12orf44 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 41058 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr12 52596776 52597514 52597151 Y NR4A1 KRT80 NA NA NA NA KRT80 12992 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 53264136 53264576 53264217 Y PFDN5 NA KRT6B,KRT2,KRT75,LOC283404,LOC283403,KRT84,KRT85,KRT80,KRT18,KRT8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KRT18 76079 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 53270322 53270511 53270351 Y RARG,KRT84,KRT6C,KRT6A,KRT5,KRT2,KRT1,KRT76,KRT3,KRT4,KRT78 NA EIF4B,LOC283404 MCF7 ChIA-PET 22265404 KRT18 70144 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 53273269 53273433 53273418 Y NA NA NA NA NA NA KRT18 67222 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 53312254 53312405 53312393 Y NA KRT18,KRT8 NA NA NA NA KRT18 28250 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 53765037 53765535 53765115 Y CSAD,ITGB7,PFDN5,SP1,SP1,PRR13 AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 6425 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 54090300 54090537 54090319 Y NA ATP5G2,CALCOCO1 NA NA NA NA ATP5G2 21108 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 54400493 54400742 54400596 Y HOXC10,HOXC9,HOXC8,HOXC6,HOXC4 HOXC10,HOXC6,HOXC9,HOXC-AS1,HOXC8,HOXC5,HOXC4 NA NA NA NA HOXC8 90 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 54411861 54412590 54411908 Y COPZ1,ATP5G2,HOXC10,HOXC9,HOXC8,HOXC4,HOXC6,HOXC5,HOXC4 HOXC10,HOXC6,HOXC9,HOXC-AS1,HOXC8,HOXC5,HOXC4 NA NA NA NA HOXC8 11029 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr12 55435077 55435406 55435254 Y NA NA NA NA NA NA MUCL1 212774 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 56132069 56132385 56132308 Y OR6C4,OR10P1,SMARCC2,IKZF4 BLOC1S1,RP11-644F5.11,CD63,GDF11 NA NA NA NA GDF11 2679 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 56193144 56193361 56193252 Y OR6C3,OR6C75 SARNP,ORMDL2,TMEM198B,DNAJC14 NA NA NA NA SARNP 16179 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 56831514 56831759 56831654 Y IKZF4 TIMELESS,SPRYD4 NA NA NA NA TIMELESS 9428 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 57028610 57029302 57028864 Y NA BAZ2A,ATP5B NA NA NA NA BAZ2A 10 CAGE LC-1F hg19 FANTOM5 5.01280923285694 chr12 58281637 58282038 58281777 Y CDK4,METTL1,METTL21B,TSFM CTDSP2 CTDSP2,TSFM,AVIL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTDSP2 43115 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr12 58337769 58337952 58337777 Y NA XRCC6BP1 NA NA NA NA XRCC6BP1 4445 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 62559325 62559470 62559411 Y NA NA NA NA NA NA USP15 92649 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 63149457 63149757 63149616 Y NA NA NA NA NA NA RP11-631N16.2 154925 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 63179567 63180349 63179723 Y NA NA NA NA NA NA PPM1H 146468 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 66285844 66286273 66285967 Y IRAK3 NA NA NA NA NA HMGA2 69933 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 66628292 66629290 66628922 Y TMBIM4,IRAK3,HELB NA NA NA NA NA HELB 65035 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 68959428 68959486 68959457 Y NA RAP1B NA NA NA NA RAP1B 43133 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 69036661 69037118 69036873 Y NA RAP1B,RP11-254B13.3,RPL7P42,NUP107 NA NA NA NA RP11-254B13.3 1888 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr12 69180946 69181662 69181342 Y NA SLC35E3,MDM2 SLC35E3 IMR90 Hi-C 24141950 MDM2 18294 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 69305634 69305702 69305668 Y RAP1B,LYZ,CPM,CPM NA NA NA NA NA MDM2 105678 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 69686526 69686874 69686654 Y NA NA NA NA NA NA CPSF6 55209 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 69868200 69868446 69868430 Y CPSF6,YEATS4,RAB3IP,FRS2,CCT2,CCT2 FRS2 NA NA NA NA FRS2 6071 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 75986624 75986957 75986791 Y NA NA PHLDA1,OSBPL8,NAP1L1 IMR90 Hi-C 24141950 KRR1 83208 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 76337836 76338217 76338130 Y GLIPR1,PHLDA1 NA PHLDA1 MCF7 ChIA-PET 22265404 PHLDA1 87495 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 76497491 76497684 76497588 Y NA NAP1L1 OSBPL8,KRR1,NAP1L1,BBS10 IMR90 Hi-C 24141950 NAP1L1 20678 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 79803401 79803717 79803562 Y NA NA NA NA NA NA PAWR 279160 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 92517978 92518398 92518142 Y BTG1 C12orf79,RP11-796E2.4,BTG1 NA NA NA NA C12orf79 16292 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 93321551 93321826 93321626 Y EEA1 EEA1 NA NA NA NA EEA1 444 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 93890331 93890756 93890540 Y NA MRPL42 NA NA NA NA MRPL42 31067 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 95680646 95681018 95680718 Y NA NA NA NA NA NA VEZT 71124 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 99103586 99103986 99103782 Y NA NA NA NA NA NA APAF1 66667 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 102892301 102892634 102892501 Y NA NA NA NA NA NA NUP37 380399 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 104330398 104330552 104330475 Y NA HSP90B1,C12orf73,TDG NA NA NA NA HSP90B1 8513 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 104671230 104671489 104671317 Y TXNRD1 RPL18AP3 NA NA NA NA RPL18AP3 14174 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 104791559 104791875 104791716 Y TXNRD1 NA CHST11,SLC41A2,C12orf45 IMR90 Hi-C 24141950 RPL18AP3 134503 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 105114255 105114695 105114403 Y EID3,CHST11,KIAA1033 NA NA NA NA NA SLC41A2 235827 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 108297283 108297694 108297638 Y NA NA NA NA NA NA PRDM4 144234 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr12 109032155 109032517 109032383 Y NA NA ISCU,TMEM119,SELPLG IMR90 Hi-C 24141950 ISCU 77797 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 109083720 109083964 109083780 Y SSH1 CORO1C NA NA NA NA CORO1C 39408 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 109084686 109085066 109084867 Y SSH1,CORO1C CORO1C NA NA NA NA CORO1C 38306 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 109088465 109088864 109088838 Y SSH1,CORO1C CORO1C NA NA NA NA CORO1C 34508 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 109117977 109118365 109118310 Y SELPLG,SSH1,CORO1C CORO1C NA NA NA NA CORO1C 5007 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 109248007 109248657 109248411 Y SELPLG,CORO1C,SSH1 SSH1 NA NA NA NA SSH1 709 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 109249958 109250678 109250397 Y NA SSH1 NA NA NA NA SSH1 592 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 110735237 110735389 110735298 Y NA ATP2A2 NA NA NA NA ATP2A2 18676 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 110867136 110867499 110867318 Y NA ANAPC7,HMGA1P3,ARPC3,GPN3 NA NA NA NA HMGA1P3 1049 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 112341708 112342051 112341878 Y ATXN2,BRAP,MAPKAPK5,NAA25,C12orf51,TMEM116 NA NA NA NA NA MAPKAPK5 63926 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 118497859 118498236 118498048 Y NA RFC5 NA NA NA NA WSB2 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 120426531 120426889 120426594 Y NA NA NA NA NA NA CIT 113436 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr12 120728531 120728703 120728617 Y NA PXN,NME2P1,RNU4-2,RNU4-1 PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNU4-1 337 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 121866033 121866226 121866130 Y NA ANAPC5,RNF34 NA NA NA NA RNF34 30189 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 122020162 122020238 122020212 Y RNF34,SETD1B,ORAI1,KDM2B,KDM2B RP13-941N14.1,KDM2B,ORAI1 NA NA NA NA KDM2B 3242 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 122224293 122224471 122224351 Y CAMKK2,KDM2B,ORAI1,MLXIP,SETD1B,RHOF RHOF,AC084018.1,SETD1B NA NA NA NA RHOF 14838 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 122771781 122771848 122771815 Y NA VPS33A NA NA NA NA VPS33A 22713 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 122908043 122908483 122908329 Y ZCCHC8,DENR,CLIP1 CLIP1 NA NA NA NA CLIP1 2864 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr12 123930588 123930862 123930771 Y RILPL2 RILPL2,SNRNP35 SNRNP35,SBNO1,SETD8,RILPL1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SNRNP35 9326 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 125050536 125050830 125050706 Y NA NA NA NA NA NA SCARB1 314384 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 125050856 125051375 125051213 Y UBC,NCOR2 NA NA NA NA NA SCARB1 313839 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 127770941 127771084 127771022 Y NA NA NA NA NA NA AC079949.1 122269 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 129305431 129305689 129305549 Y SLC15A4,GLT1D1 SLC15A4 NA NA NA NA SLC15A4 839 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 130624608 130625033 130624823 Y RIMBP2 FZD10-AS1,FZD10 NA NA NA NA FZD10-AS1 19768 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr12 133021534 133022956 133022670 Y POLE,DDX51,FBRSL1 MUC8,FBRSL1 LOC100507055,FBRSL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MUC8 25770 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr12 133701272 133701384 133701332 Y ZNF605,ZNF605,ZNF26,ZNF84,ZNF84,ZNF268,ZNF268,ZNF10 ZNF140,ZNF891,ZNF10,ZNF268 NA NA NA NA ZNF891 3675 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 20137811 20138146 20137910 Y NA NA NA NA NA NA MPHOSPH8 67642 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 20693405 20693544 20693484 Y CRYL1 GJA3 NA NA NA NA GJA3 39644 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 20694627 20695029 20694906 Y PSPC1,ZMYM5 GJA3 NA NA NA NA GJA3 38159 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 22545143 22545315 22545232 Y NA NA FGF9 IMR90 Hi-C 24141950 RPS7P10 343989 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 23471356 23471597 23471410 Y NA NA NA NA NA NA FTH1P7 202643 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 23485782 23486124 23485811 Y NA NA NA NA NA NA FTH1P7 217069 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 24133122 24133556 24133337 Y NA TNFRSF19 MIPEP,TNFRSF19 IMR90 Hi-C 24141950 TNFRSF19 8953 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 24528296 24528692 24528455 Y PCOTH NA SPATA13,TNFRSF19 IMR90 Hi-C 24141950 MIPEP 66738 CAGE LC-1F hg19 FANTOM5 51.2848944592287 chr13 24697003 24697328 24697264 Y NA NA SPATA13 IMR90 Hi-C 24141950 MIPEP 235445 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 28006253 28006341 28006297 Y NA GTF3A,MTIF3 NA NA NA NA GTF3A 9572 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 28470399 28470626 28470551 Y NA NA NA NA NA NA CDX2 72650 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 29106089 29106574 29106395 Y NA NA FLT1,PAN3,POMP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EIF4A1P7 64396 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 30407984 30408178 30408116 Y UBL3 UBL3 NA NA NA NA UBL3 14643 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 31483566 31483936 31483755 Y NA NA NA NA NA NA HSPH1 250589 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 34116442 34117241 34116673 Y NA NA NA NA NA NA STARD13 193675 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 41468341 41468634 41468483 Y NA SUGT1P3 NA NA NA NA SUGT1P3 25276 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 41581586 41581700 41581679 Y NA NA NA NA NA NA WBP4 51710 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 42162855 42163294 42163201 Y C13orf15,DGKH NA NA NA NA NA NAA16 279514 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 43451555 43451845 43451701 Y NA NA NA NA NA NA DNAJC15 143494 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 44329047 44329228 44329222 Y NA NA NA NA NA NA DGKZP1 211332 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 44542732 44543742 44543446 Y SERP2 DGKZP1 SERP2 IMR90 Hi-C 24141950 DGKZP1 2172 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 45492137 45492940 45492235 Y TSC22D1 NA NA NA NA NA NUFIP1 68678 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 45941510 45941762 45941695 Y COG3,TPT1 TPT1-AS1,TPT1,SLC25A30 NA NA NA NA TPT1 28005 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr13 46244354 46244716 46244645 Y NA NA NA NA NA NA COG3 207294 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 48733452 48733577 48733515 Y RCBTB2,RB1,ITM2B POLR2KP2 NA NA NA NA POLR2KP2 26782 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 49569007 49569270 49569139 Y NA FNDC3A NA NA NA NA FNDC3A 20959 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 50217217 50217337 50217325 Y SETDB2,SETDB2,PHF11,PHF11,ARL11 ARL11,EBPL NA NA NA NA ARL11 16782 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 50630657 50630910 50630784 Y NA DLEU1 NA NA NA NA DLEU1 23397 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 50661413 50661685 50661628 Y NA DLEU1,DLEU2 NA NA NA NA DLEU1 7106 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 50897882 50898235 50898046 Y NA RPL34P26 DLEU2,DLEU1 IMR90 Hi-C 24141950 RPL34P26 35664 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 51395866 51396155 51396034 Y NA NA NA NA NA NA RNASEH2B 85659 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 51641920 51642198 51642053 Y INTS6 NA NA NA NA NA FAM124A 152305 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 67168022 67168413 67168283 Y NA NA NA NA NA NA H3F3BP1 5078786 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 72419778 72420070 72419973 Y DACH1 DACH1 NA NA NA NA DACH1 19260 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr13 74709487 74710034 74709735 Y KLF12 KLF12 NA NA NA NA KLF12 3093 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 77166796 77167041 77166918 Y NA NA NA NA NA NA KCTD12 291499 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 77338551 77338941 77338664 Y NA NA KCTD12 IMR90 Hi-C 24141950 KCTD12 119599 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 96498991 96499334 96499248 Y NA NA NA NA NA NA DNAJC3 171598 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 100013491 100013836 100013585 Y DOCK9,UBAC2,UBAC2,GPR18,GPR183,CLYBL NA NA NA NA NA TM9SF2 137835 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 100318044 100318289 100318076 Y ZIC5,ZIC2 NA NA NA NA NA CLYBL 61125 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 100738422 100738621 100738542 Y NA PCCA NA NA NA NA PCCA 648 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 101075706 101076016 101075848 Y NA NA NA NA NA NA TMTC4 249331 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 106777477 106777605 106777541 Y NA NA EFNB2 IMR90 Hi-C 24141950 ARGLU1 440907 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 107173594 107173915 107173796 Y NA ARGLU1 NA NA NA NA ARGLU1 44597 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 110439676 110440079 110439929 Y IRS2 IRS2 NA NA NA NA IRS2 2761 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 111227983 111228269 111228196 Y ING1,ING1,ANKRD10,RAB20 RAB20,CARKD RAB20 IMR90 Hi-C 24141950 RAB20 15903 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 111560939 111561133 111561094 Y NA ANKRD10 NA NA NA NA ANKRD10 4283 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr13 111589420 111590157 111589779 Y NA ANKRD10 ARHGEF7,LINC00346 IMR90 Hi-C 24141950 ANKRD10 24004 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr13 112727649 112728064 112727870 Y NA SNORD44,SOX1 NA NA NA NA SOX1 7736 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr13 114147699 114148153 114147800 Y F7,F10,PROZ,GRTP1 TMCO3 NA NA NA NA TMCO3 4389 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 21151333 21151694 21151411 Y NA RNASE4,ANG NA NA NA NA ANG 997 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 21288613 21288985 21288797 Y NA NA NA NA NA NA ANG 138277 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr14 22115392 22115940 22115648 Y RPGRIP1,SALL2 NA NA NA NA NA SALL2 112042 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 27997396 27997715 27997579 Y NA NA NA NA NA NA NOVA1 932436 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 31698850 31699225 31699035 Y STRN3 HECTD1 AP4S1,HECTD1,STRN3,HEATR5A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HECTD1 23840 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 32425486 32425585 32425536 Y NUBPL NA AKAP6 IMR90 Hi-C 24141950 ARHGAP5 117735 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 32597823 32598061 32597946 Y NUBPL NA NA NA NA NA ARHGAP5-AS1 53824 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 32953597 32954289 32954012 Y ARHGAP5,AKAP6,NPAS3 RP11-320M16.1 NA NA NA NA RP11-320M16.1 1591 CAGE LC-1F hg19 FANTOM5 4.24160781241741 chr14 33756619 33756719 33756669 Y NA NA NA NA NA NA RP11-320M16.1 804613 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr14 34033986 34034251 34034169 Y NA NA NA NA NA NA SPTSSA 895311 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 34802064 34802306 34802186 Y C14orf147 NA SPTSSA MCF7 ChIA-PET 22265404 SPTSSA 127256 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 34966252 34966485 34966304 Y NA SPTSSA,EGLN3,EAPP NA NA NA NA EGLN3 36272 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 35084533 35084797 35084665 Y EAPP SNX6 NA NA NA NA SNX6 12592 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 39559553 39559840 39559693 Y NA SEC23A,GEMIN2 NA NA NA NA SEC23A 17010 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 39637578 39637824 39637713 Y NA PNN NA NA NA NA TRAPPC6B 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 39900071 39900466 39900211 Y PNN,CTAGE5,FBXO33 FBXO33 NA NA NA NA FBXO33 367 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 50329576 50329987 50329651 Y NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 11655 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 50334846 50335244 50334992 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 16925 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 50406046 50406061 50406054 Y NA ARF6 NA NA NA NA ARF6 48236 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 50465888 50466432 50466066 Y NA NA NA NA NA NA ARF6 108078 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 51410207 51410388 51410282 Y NIN,PYGL PYGL NA NA NA NA PYGL 753 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 51834333 51834594 51834461 Y NA RP11-255G12.3 NA NA NA NA RP11-255G12.3 27259 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 54954614 54954684 54954648 Y NA GMFB,CGRRF1 NA NA NA NA GMFB 700 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr14 55112565 55112692 55112631 Y NA NA NA NA NA NA CGRRF1 138035 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 55569733 55570176 55570087 Y LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L LGALS3 LGALS3,DLGAP5,MAPK1IP1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LGALS3 18652 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 56047594 56047945 56047904 Y NA RPL7AP4,KTN1,KTN1-AS1 NA NA NA NA KTN1-AS1 2766 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 56677019 56677095 56677057 Y NA NA NA NA NA NA PELI2 94487 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 56733293 56733420 56733313 Y PELI2 NA NA NA NA NA PELI2 150761 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 57264055 57264245 57264231 Y NA NA NA NA NA NA EXOC5 469481 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 58637905 58638297 58638125 Y NA UBA52P3,ACTR10 NA NA NA NA ACTR10 26501 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr14 59949393 59949731 59949550 Y C14orf149 GPR135,JKAMP NA NA NA NA JKAMP 232 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 60629133 60629293 60629144 Y NA DHRS7 NA NA NA NA DHRS7 5281 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 60679186 60679974 60679676 Y NA DHRS7,PPM1A,CTD-2184C24.2 NA NA NA NA PPM1A 30496 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 61822624 61823005 61822699 Y PRKCH RP11-902B17.1 NA NA NA NA RP11-902B17.1 35088 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 61855306 61855686 61855500 Y PRKCH NA NA NA NA NA RP11-902B17.1 67770 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 61978878 61979019 61978952 Y PRKCH,HIF1A NA NA NA NA NA HIF1A 181212 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 63159002 63159168 63159087 Y NA NA NA NA NA NA PPP2R5E 848924 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 64320785 64320937 64320842 Y PPP2R5E,WDR89,WDR89,SYNE2,SYNE2 SYNE2 NA NA NA NA SYNE2 3102 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 65525721 65526064 65525893 Y NA MAX NA NA NA NA MAX 41349 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 65801624 65801887 65801778 Y NA NA NA NA NA NA FUT8 73423 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 68720004 68720020 68720012 Y NA NA NA NA NA NA PPIAP6 166893 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 68884830 68884917 68884875 Y NA PPIAP6 NA NA NA NA PPIAP6 1996 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 69402735 69403079 69402843 Y GALNTL1 ACTN1 NA NA NA NA ACTN1 41078 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 69851262 69851639 69851451 Y NA SLC39A9,ERH NA NA NA NA SLC39A9 11093 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 71349559 71349894 71349705 Y MED6,PCNX PCNX NA NA NA NA PCNX 22228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 71797093 71797681 71797289 Y PCNX SIPA1L1 SIPA1L1,LOC145474 IMR90 Hi-C 24141950 SIPA1L1 11927 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 72438276 72438928 72438440 Y NA RGS6 NA NA NA NA RGS6 41120 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 72650490 72650870 72650581 Y NA NA NA NA NA NA RGS6 253334 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 72886764 72887025 72886895 Y DPF3 NA NA NA NA NA RGS6 489608 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 74220065 74220506 74220203 Y C14orf169,ZNF410,COQ6,COQ6,C14orf43,C14orf43 PNMA1 NA NA NA NA PNMA1 40937 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 75721756 75722023 75721798 Y NA RP11-293M10.2,FOS TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-293M10.2 2091 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 76234838 76235006 76234846 Y NA NA TGFB3,IFT43 IMR90 Hi-C 24141950 C14orf1 109306 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 77422240 77422571 77422458 Y VASH1,C14orf166B,IRF2BPL RP11-7F17.1 IRF2BPL,KIAA1737 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-7F17.1 10455 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 77473789 77473986 77473849 Y NA RP11-7F17.1,IRF2BPL NA NA NA NA IRF2BPL 19048 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 77489818 77490087 77489881 Y NA IRF2BPL NA NA NA NA IRF2BPL 2947 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 77499482 77500543 77500476 Y VASH1,C14orf166B,IRF2BPL IRF2BPL,RP11-7F17.3 KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 6448 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 77554689 77554897 77554781 Y NA RP11-7F17.3,TMEM63C KIAA1737,ANGEL1,C14orf166B,IRF2BPL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-7F17.3 14002 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 77586318 77586417 77586388 Y NA RP11-7F17.3,TMEM63C NA NA NA NA TMEM63C 5407 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 77640033 77640278 77640160 Y NA NA C14orf166B,ZDHHC22,POMT2,GSTZ1,KIAA1737,TMEM63C,NGB,MIR1260A,TMED8 IMR90 Hi-C 24141950 TMEM63C 59122 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 80084258 80084404 80084331 Y NA NA NA NA NA NA CEP128 1339457 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 81685513 81686063 81685724 Y GTF2A1,GTF2A1 NA NA NA NA NA GTF2A1 0 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr14 85881762 85881957 85881956 Y FLRT2 NA NA NA NA NA GALC 2576052 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 90910680 90911014 90910847 Y NA CALM1 CALM1,TTC7B MCF7 ChIA-PET 22265404 CALM1 49834 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 91454457 91454803 91454684 Y NA NA NA NA NA NA C14orf159 69874 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 93192576 93192808 93192662 Y MOAP1,C14orf142,C14orf109,C14orf109,SLC24A4,SLC24A4,RIN3 LGMN NA NA NA NA LGMN 20239 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 93552204 93552427 93552400 Y NA ITPK1 NA NA NA NA ITPK1 28238 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr14 94889921 94890056 94890007 Y SERPINA1 NA NA NA NA NA SERPINA3 186658 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 99827366 99827674 99827539 Y NA NA NA NA NA NA SETD3 117542 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 100659173 100659604 100659490 Y NA YY1,RP11-638I2.4 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 YY1 43031 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr14 100899876 100900012 100899943 Y WARS,WARS NA NA NA NA NA WARS 58734 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 102414226 102414964 102414565 Y NA DYNC1H1 NA NA NA NA DYNC1H1 13901 CAGE LC-1F hg19 FANTOM5 4.24160781241741 chr14 102991046 102991386 102991124 Y NA ANKRD9 ANKRD9,RCOR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD9 16910 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 103221108 103221258 103221164 Y NA TRAF3 NA NA NA NA TRAF3 20555 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 103577206 103577606 103577492 Y C14orf153 TNFAIP2 NA NA NA NA TNFAIP2 10173 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 104582105 104582467 104582315 Y NA MIR203,KIF26A NA NA NA NA MIR203 363 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 104583053 104583460 104583371 Y NA MIR203,KIF26A NA NA NA NA MIR203 1311 CAGE LC-1F hg19 FANTOM5 7.32641349417553 chr14 105144100 105144955 105144117 Y GPR132,AKT1 RP11-982M15.6,INF2,ADSSL1 NA NA NA NA RP11-982M15.6 528 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr14 105434041 105434308 105434245 Y NA AHNAK2,C14orf79 PLD4 MCF7 ChIA-PET 22265404 AHNAK2 8386 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 105557924 105558306 105558075 Y NA NA BTBD6,BRF1,JAG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDCA4 72439 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr14 105948139 105949025 105948432 Y NA CRIP2,C14orf80,TMEM121 NA NA NA NA C14orf80 5167 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 25018281 25018456 25018384 Y SNURF,SNRPN,SNRPN,SNRPN SNRPN NA NA NA NA SNRPN 48338 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 25554216 25554517 25554319 Y NA NA NA NA NA NA UBE3A 127611 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 25811823 25812139 25811960 Y NA NA LOC100128714 IMR90 Hi-C 24141950 UBE3A 129695 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 26359333 26359715 26359530 Y NA NA NA NA NA NA UBE3A 677205 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 26864879 26864942 26864916 Y NA NA NA NA NA NA GABRA5 244568 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 29526240 29526874 29526776 Y NA NDNL2 NA NA NA NA NDNL2 33159 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 31215782 31215951 31215851 Y FAN1,FAN1,MTMR10 FAN1 NA NA NA NA FAN1 21727 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 32384266 32384605 32384436 Y CHRNA7 NA NA NA NA NA CHRNA7 63575 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 35590731 35591134 35590845 Y NA RP11-150L8.4 ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466 IMR90 Hi-C 24141950 RP11-150L8.4 1090 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 35650165 35650403 35650284 Y NA NA NA NA NA NA RP11-150L8.4 60524 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 37398990 37399302 37399145 Y C15orf41,MEIS2,MEIS2,MEIS2,MEIS2 MEIS2 NA NA NA NA MEIS2 7486 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 39163582 39163767 39163675 Y RASGRP1,C15orf53 NA FSIP1,THBS1 IMR90 Hi-C 24141950 RASGRP1 307806 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 39449850 39450075 39449963 Y NA NA FSIP1,C15orf53,THBS1 IMR90 Hi-C 24141950 THBS1 421205 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 41220555 41220912 41220794 Y NUSAP1,DLL4 VPS18,CHAC1 NA NA NA NA CHAC1 22248 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 42349424 42349982 42349743 Y MGA,JMJD7,EHD4,VPS39,TMEM87A,SNAP23 NA PLA2G4E IMR90 Hi-C 24141950 EHD4 86648 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr15 42968495 42968534 42968520 Y NA NA NA NA NA NA CDAN1 58790 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 44837233 44837387 44837300 Y CTDSPL2,PATL2 EIF3J-AS1,EIF3J NA NA NA NA EIF3J 9978 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 45938532 45938945 45938638 Y NA SQRDL NA NA NA NA SQRDL 17186 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 46881345 46881677 46881639 Y NA NA NA NA NA NA SEMA6D 592621 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr15 48253775 48254090 48253870 Y SEMA6D NA SEMA6D IMR90 Hi-C 24141950 MYEF2 214624 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 49488021 49488225 49488024 Y NA GALK2,COPS2 NA NA NA NA COPS2 42163 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 50995097 50995499 50995351 Y SPPL2A TRPM7 NA NA NA NA TRPM7 18085 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 51385997 51386103 51386050 Y NA NA NA NA NA NA AP4E1 187128 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 52385766 52385957 52385877 Y DMXL2,MAPK6 CTD-2184D3.1 NA NA NA NA CTD-2184D3.1 274 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 55487983 55488563 55488357 Y RAB27A,PIGB,RSL24D1 RSL24D1 NA NA NA NA RSL24D1 718 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 55614631 55614957 55614885 Y NA PIGB,RAB27A,RP11-139H15.1 NA NA NA NA RP11-139H15.1 5272 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 56965853 56966086 56966042 Y NA NA NA NA NA NA MNS1 210518 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 57946197 57946519 57946360 Y NA NA NA NA NA NA POLR2M 63966 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 59085961 59086460 59086218 Y NA ADAM10,FAM63B NA NA NA NA FAM63B 24570 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 59642348 59642705 59642508 Y BNIP2,RNF111 FAM81A,MYO1E NA NA NA NA FAM81A 20187 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 60293275 60293547 60293411 Y NA NA NA NA NA NA BNIP2 313542 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 60861865 60862603 60862448 Y NA NA NA NA NA NA RP11-219B17.1 92488 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 60883059 60884017 60883872 Y RORA NA NA NA NA NA RP11-219B17.1 113682 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 61298105 61298485 61298295 Y NA NA NA NA NA NA RORA 221033 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 62405210 62405473 62405223 Y NA NA NA NA NA NA VPS13C 54538 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 63766170 63766327 63766326 Y HERC1,USP3 USP3 APH1B,RAB8B,FBXL22,LOC100130855,USP3,CA12,HERC1,FAM96A,SNX1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 USP3 28466 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 64060591 64060833 64060743 Y USP3,HERC1,DAPK2 NA NA NA NA NA HERC1 63308 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 64753700 64753985 64753784 Y PLEKHO2 ZNF609 NA NA NA NA ZNF609 2759 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 65244919 65245418 65244949 Y ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16,ANKDD1A SPG21 NA NA NA NA SPG21 35230 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 65245420 65245827 65245459 Y ZNF609,OAZ2,PLEKHO2,PARP16 SPG21 NA NA NA NA SPG21 34821 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 65951559 65951691 65951625 Y NA SLC24A1 NA NA NA NA SLC24A1 49855 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 66162838 66163256 66163114 Y NA NA NA NA NA NA DENND4A 80207 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 66433661 66433831 66433761 Y DENND4A,MAP2K1 NA NA NA NA NA DIS3L 149724 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 66707547 66707736 66707571 Y MAP2K1 TIPIN,MAP2K1 RPL4,SNAPC5 IMR90 Hi-C 24141950 MAP2K1 30392 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 66993287 66993569 66993487 Y MAP2K1,SMAD6 NA NA NA NA NA RPL4 178417 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 69826034 69826378 69826206 Y NA NA C15orf50,TLE3 IMR90 Hi-C 24141950 RPLP1 82911 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 70391851 70392235 70392005 Y TLE3 TLE3 NA NA NA NA TLE3 3336 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 70800143 70800820 70800577 Y NA NA KIF23,RPLP1,TLE3 IMR90 Hi-C 24141950 UACA 253112 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 73538661 73539057 73538860 Y NEO1 NA NA NA NA NA NEO1 196610 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 73939698 73939908 73939794 Y NA NPTN,CD276 C15orf60 IMR90 Hi-C 24141950 NPTN 15223 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 74823971 74824076 74824015 Y NA ARID3B ARID3B MCF7 ChIA-PET 22265404 ARID3B 7442 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 74908840 74909023 74908946 Y NA CLK3 NA NA NA NA CLK3 19999 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr15 75018665 75019349 75018947 Y SCAMP2,C15orf39,CYP1A1 EDC3,CYP1A1 NA NA NA NA CYP1A1 2714 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr15 75081771 75082003 75081872 Y ARID3B,CLK3,C15orf39,CSK CSK NA NA NA NA CSK 9373 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 75339281 75339878 75339595 Y SIN3A,SIN3A,MAN2C1,CLK3,CSK,SCAMP2,C15orf39 PPCDC NA NA NA NA PPCDC 25385 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 75449127 75449383 75449255 Y NA C15orf39 PPCDC,SCAMP5 IMR90 Hi-C 24141950 C15orf39 36601 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 75744907 75745094 75744993 Y C15orf39,ODF3L1,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A SIN3A NA NA NA NA SIN3A 1089 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr15 75746315 75746749 75746512 Y PPCDC,C15orf39,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A SIN3A NA NA NA NA SIN3A 132 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 75867013 75867354 75867182 Y C15orf39,MAN2C1,SIN3A,SIN3A,UBE2Q2,ODF3L1 PTPN9,SNUPN NA NA NA NA PTPN9 2276 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 76050803 76051078 76050853 Y NA ODF3L1,DNM1P35 NA NA NA NA DNM1P35 21839 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 81156027 81156230 81156065 Y NA NA NA NA NA NA KIAA1199 86343 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 81277111 81277444 81277389 Y STARD5,MESDC1 MESDC2,MESDC1 NA NA NA NA MESDC2 2775 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 83681404 83681605 83681512 Y NA HOMER2,FAM103A1,C15orf40 NA NA NA NA C15orf40 3011 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 86321738 86321858 86321816 Y NA KLHL25 NA NA NA NA KLHL25 14403 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 90005846 90006063 90005954 Y NA NA NA NA NA NA POLG 129754 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 90649995 90650276 90650136 Y NA IDH2 NA NA NA NA IDH2 6259 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 90955763 90956502 90956124 Y FES,FES,FES,ZNF710,CIB1,IQGAP1 IQGAP1 NA NA NA NA IQGAP1 26313 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 91208661 91208996 91208948 Y NA RP11-387D10.2,BLM NA NA NA NA RP11-387D10.2 49376 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 92404418 92404854 92404606 Y SLCO3A1 SLCO3A1 NA NA NA NA SLCO3A1 9493 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 92486330 92486707 92486433 Y SLCO3A1 NA NA NA NA NA SLCO3A1 91405 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 92497568 92497970 92497770 Y NA NA NA NA NA NA SLCO3A1 102643 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 93363497 93364154 93363735 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 FAM174B ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 FAM174B 12383 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 96884042 96884481 96884402 Y NA NR2F2 NA NA NA NA NR2F2 16875 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr15 99091450 99092159 99091603 Y NA NA IGF1R,SYNM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IGF1R 98041 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 99193577 99194531 99194069 Y IGF1R IGF1R NA NA NA NA IGF1R 3377 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr15 99395486 99396002 99395689 Y IGF1R NA NA NA NA NA IGF1R 205286 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr15 100049015 100049413 100049233 Y MEF2A MEF2A MEF2A,LRRC28,TTC23 IMR90 Hi-C 24141950 MEF2A 33645 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 121563 121849 121614 Y TMEM8A,PIGQ,PIGQ,NME4,MRPL28,ITFG3,DECR2,RHBDF1,MPG,MPG SNRNP25,POLR3K,RHBDF1,MPG NA NA NA NA RHBDF1 2505 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 612039 612238 612073 Y RGS11,ARHGDIG,RHBDL1,GNG13,C16orf11 PIGQ,RAB40C NA NA NA NA PIGQ 2757 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 729341 729555 729445 Y NA C16orf13,FAM195A,AL022341.3,WDR90,RHOT2,STUB1,JMJD8,WDR24,FBXL16,METRN,FAM173A NA NA NA NA STUB1 1117 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 1979729 1980160 1979842 Y TSC2,MLST8,DNASE1L2,C16orf79,ABCA3,CCDC154,NME3,NUBP2,TBL3,RNF151 NDUFB10,RPS2,SNHG9,TBL3 NUBP2,FAHD1,IGFALS,C16orf73,HS3ST6,MAPK8IP3,SPSB3,EME2,NME3,MRPS34,HAGH,LINC00254 IMR90 Hi-C 24141950 NDUFB10 27349 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 2057818 2059084 2058234 Y TRAF7,ECI1,HN1L,EME2,ZNF598 RPS2,SNHG9,TBL3,GFER,SYNGR3,SLC9A3R2,TSC2,NTHL1 NA NA NA NA ZNF598 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 2657653 2657823 2657765 Y NA NA NA NA NA NA ERVK13-1 63622 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 2917931 2918273 2918246 Y NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 12914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 3053798 3054225 3053960 Y NA PAQR4,PKMYT1,TNFRSF12A,THOC6,HCFC1R1 NA NA NA NA TNFRSF12A 12221 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 3156518 3156937 3156694 Y PAQR4,CLUAP1,ZNF205 ZNF205,ZNF213 NA NA NA NA ZNF205 3624 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 3200393 3200919 3200597 Y NA ZNF205,ZNF213 NA NA NA NA ZNF213 22615 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 3202363 3202472 3202417 Y NA ZNF205,ZNF213 NA NA NA NA ZNF213 24585 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 3285972 3286117 3286070 Y PRSS22,ZSCAN10,ZNF200,ZNF200,ZNF200,ZNF75A,ZNF263 ZNF200,ZNF263 NA NA NA NA ZNF200 1751 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 3414643 3415237 3414919 Y NA MTRNR2L4,ZNF174 NA NA NA NA MTRNR2L4 5046 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 3931357 3931444 3931401 Y C16orf90 CREBBP NA NA NA NA CREBBP 2630 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 4233647 4234082 4234013 Y NA NA NA NA NA NA ADCY9 69461 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 4666118 4666710 4666381 Y NA MGRN1 NA NA NA NA MGRN1 1624 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 4818680 4818913 4818758 Y C16orf5,C16orf5,SEC14L5,ROGDI ANKS3,ZNF500,ROGDI NA NA NA NA ZNF500 3055 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 6070691 6070772 6070742 Y RBFOX1 NA NA NA NA NA FAM86A 924882 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 6887273 6887583 6887429 Y NA NA NA NA NA NA FAM86A 1741464 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 6921909 6922299 6922100 Y NA NA NA NA NA NA FAM86A 1776100 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 7170846 7171392 7171105 Y RBFOX1 NA NA NA NA NA METTL22 1542148 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 7354527 7355049 7354969 Y NA NA NA NA NA NA METTL22 1358491 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 7700164 7700333 7700250 Y NA NA NA NA NA NA METTL22 1013207 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 7725716 7726034 7725879 Y NA NA NA NA NA NA METTL22 987506 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 8630607 8630973 8630790 Y NA NA NA NA NA NA METTL22 82567 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 8939360 8939674 8939516 Y USP7 TMEM186,CARHSP1 NA NA NA NA CARHSP1 21192 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 9147014 9147397 9147240 Y ABAT C16orf72 USP7,C16orf72 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C16orf72 36108 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 9162231 9162510 9162397 Y NA C16orf72 USP7,C16orf72 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C16orf72 20995 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 10956294 10956664 10956435 Y NUBP1,CIITA NA CIITA IMR90 Hi-C 24141950 DEXI 77653 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 11591931 11591962 11591945 Y NA NA SNN,TXNDC11,CLEC16A,LITAF IMR90 Hi-C 24141950 LITAF 136275 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 11968147 11968344 11968329 Y ZC3H7A RSL1D1,GSPT1 RSL1D1 IMR90 Hi-C 24141950 RSL1D1 24705 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 15769690 15769796 15769712 Y NA KIAA0430,NDE1 NA NA NA NA NDE1 34566 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 15979661 15979785 15979715 Y NA FOPNL,RPL15P20 NA NA NA NA FOPNL 697 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 15996854 15996874 15996863 Y NA FOPNL,RPL15P20,ABCC1 MYH11,ABCC1 IMR90 Hi-C 24141950 FOPNL 16372 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 16092294 16092782 16092512 Y NDE1 NA NA NA NA NA ABCC1 50860 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 16097959 16098303 16098187 Y NA NA NA NA NA NA ABCC1 56525 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 16131643 16131874 16131759 Y NA NA NA NA NA NA ABCC1 90209 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 19714468 19714843 19714656 Y NA IQCK NA NA NA NA IQCK 10935 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 20877631 20877934 20877768 Y NA LYRM1,ERI2,DCUN1D3 NA NA NA NA LYRM1 31256 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 22046502 22046742 22046619 Y NA C16orf52 NA NA NA NA C16orf52 29543 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 22202596 22202946 22202679 Y POLR3E,CDR2 EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 12657 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 22793806 22793984 22793891 Y NA HS3ST2 NA NA NA NA HS3ST2 29514 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 23473263 23473545 23473445 Y SCNN1G,GGA2 COG7 NA NA NA NA COG7 10762 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 24077587 24077959 24077773 Y PRKCB NA NA NA NA NA PRKCB 232265 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 24619135 24619479 24619307 Y SLC5A11 NA TNRC6A,RBBP6 IMR90 Hi-C 24141950 RBBP6 72121 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 27546889 27546978 27546937 Y NA GTF3C1,KIAA0556 NA NA NA NA GTF3C1 12256 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 28871082 28871475 28871117 Y NA ATXN2L,TUFM,SH2B1 NA NA NA NA SH2B1 15161 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 29019410 29019807 29019609 Y NA SPNS1 NA NA NA NA SPNS1 35868 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 30645556 30645885 30645776 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF689 12223 CAGE LC-1F hg19 FANTOM5 16.1952298292301 chr16 34441880 34442279 34442062 Y NA NA NA NA NA NA ZNF267 2558801 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr16 49810158 49810260 49810209 Y NA NA NA NA NA NA HEATR3 287592 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 51186041 51186738 51186313 Y NA NA NA NA NA NA CYLD 412080 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 53128013 53128430 53128279 Y RBL2 CHD9 NA NA NA NA CHD9 41068 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 53517834 53518098 53518006 Y NA AKTIP NA NA NA NA AKTIP 18225 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 57717053 57717380 57717096 Y FAM192A,ZNF319,GPR97 NA NA NA NA NA KATNB1 50262 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr16 58493284 58493520 58493447 Y NDRG4,NDRG4,NDRG4 NDRG4 NA NA NA NA NDRG4 1230 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 66906996 66907469 66907329 Y SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2 NAE1,PDP2 NA NA NA NA NAE1 1837 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr16 66988106 66988414 66988274 Y NA FAM96B,CES2,CES3,CES4A NA NA NA NA CES3 4726 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 68271348 68271876 68271591 Y TSNAXIP1,SLC12A4,ESRP2 ESRP2,PLA2G15,SLC7A6 NA NA NA NA ESRP2 1343 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 68415381 68415552 68415488 Y NA NA NA NA NA NA SMPD3 65039 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 69432325 69432475 69432421 Y TERF2 TERF2,CYB5B NFAT5,MIR1538,VPS4A,COG8,TERF2,NOB1,CYB5B,NQO1,WWP2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TERF2 7999 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 69564577 69564882 69564731 Y WWP2 NFAT5 NFAT5,CYB5B,TERF2,MIR1538 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAT5 32115 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 69601109 69601332 69601245 Y WWP2 NFAT5 NA NA NA NA NFAT5 4112 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 69761641 69762033 69761837 Y NA NQO1,NOB1,WWP2 NA NA NA NA NQO1 2787 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 69790577 69791500 69790768 Y PDF,NIP7,NOB1 NQO1,NOB1,WWP2 NA NA NA NA WWP2 2709 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr16 72671878 72672163 72672013 Y NA NA NA NA NA NA ZFHX3 419434 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 73076128 73076469 73076445 Y NA ZFHX3 NA NA NA NA ZFHX3 15128 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 73102477 73102709 73102578 Y ZFHX3 ZFHX3 ZFHX3,HTA IMR90 Hi-C 24141950 ZFHX3 10880 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 73104505 73104770 73104567 Y ZFHX3,ZFHX3 ZFHX3 ZFHX3,HTA IMR90 Hi-C 24141950 ZFHX3 12908 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 78832287 78832508 78832373 Y NA NA NA NA NA NA WWOX 700977 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 79040745 79040971 79040807 Y NA NA NA NA NA NA WWOX 909435 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 80614104 80614217 80614175 Y C16orf61 DYNLRB2 DYNLRB2 IMR90 Hi-C 24141950 DYNLRB2 41473 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 81491583 81491773 81491678 Y NA CMIP NA NA NA NA CMIP 14808 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 81649296 81649780 81649593 Y NA NA NA NA NA NA PLCG2 120922 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr16 81763852 81764387 81764185 Y NA PLCG2 NA NA NA NA PLCG2 6315 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 82172740 82172851 82172799 Y SDR42E1 MPHOSPH6 NA NA NA NA MPHOSPH6 28980 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 83953538 83953937 83953606 Y NA MLYCD,OSGIN1 NA NA NA NA MLYCD 22807 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 83988181 83988500 83988282 Y NA OSGIN1 NA NA NA NA OSGIN1 8294 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 85202555 85203049 85202710 Y NA NA NA NA NA NA KIAA0513 143180 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr16 85418434 85418651 85418593 Y NA NA LOC727710,LINC00311,KIAA0182,GINS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GINS2 303028 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 86962886 86963146 86962899 Y NA NA FOXL1,FOXC2,MTHFSD,FLJ30679 IMR90 Hi-C 24141950 FOXC2 364029 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 86964858 86965748 86965178 Y NA NA FOXL1,FOXC2,MTHFSD,FLJ30679,C16orf95 IMR90 Hi-C 24141950 FOXC2 366001 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 87421939 87422407 87422148 Y NA MAP1LC3B,FBXO31 NA NA NA NA FBXO31 1341 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 87774219 87774566 87774531 Y NA KLHDC4 NA NA NA NA KLHDC4 23032 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 87810498 87810587 87810524 Y NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 12900 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr16 87811524 87811882 87811665 Y NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 13926 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 87839693 87840050 87839856 Y SLC7A5 KLHDC4 SLC7A5 MCF7 ChIA-PET 22265404 KLHDC4 42095 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 88365536 88366092 88365805 Y ZNF469 NA BANP IMR90 Hi-C 24141950 ZFPM1 151633 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 88448195 88448445 88448286 Y NA NA CA5A,SLC7A5,BANP IMR90 Hi-C 24141950 ZFPM1 69280 CAGE LC-1F hg19 FANTOM5 10.7968198861534 chr16 88450186 88450490 88450462 Y NA NA CA5A,SLC7A5,BANP IMR90 Hi-C 24141950 ZFPM1 67235 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 89313669 89314138 89313993 Y ZNF276,ZNF778 ZNF778 NA NA NA NA ZNF778 31551 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 89392350 89392997 89392648 Y NA NA NA NA NA NA ZNF778 110232 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr16 89573610 89573931 89573734 Y NA ANKRD11,SPG7 NA NA NA NA SPG7 18285 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 518432 518691 518584 Y NA RPS4XP17 NA NA NA NA RPS4XP17 40096 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 574639 574965 574941 Y NA RPS4XP17,VPS53 NA NA NA NA RPS4XP17 15852 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 597415 597783 597745 Y NA RPS4XP17,VPS53,FAM57A NA NA NA NA VPS53 25174 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 654300 654699 654470 Y NA VPS53,FAM57A,DBIL5P,GEMIN4,RNMTL1,GLOD4 NA NA NA NA DBIL5P 400 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 1157102 1157245 1157179 Y NA ABR ABR,YWHAE,PITPNA,INPP5K,LOC100306951,SCARF1,RILP,TUSC5,BHLHA9,CRK,SLC43A2 IMR90 Hi-C 24141950 ABR 26787 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 1171565 1171808 1171610 Y WDR81,PITPNA,ABR,ABR ABR NA NA NA NA ABR 41250 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 1267059 1267122 1267091 Y NA YWHAE NA NA NA NA YWHAE 34550 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 1391218 1391783 1391434 Y NA CRK,MYO1C,INPP5K,PITPNA-AS1 NA NA NA NA MYO1C 2323 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 1953067 1954207 1953327 Y TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1 RTN4RL1,DPH1,OVCA2 NA NA NA NA OVCA2 9740 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 1979194 1979509 1979218 Y NA DPH1,OVCA2 NA NA NA NA OVCA2 35867 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 2302778 2303366 2303033 Y SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT MNT NA NA NA NA MNT 366 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 3453416 3453706 3453615 Y OR1G1,OR1A2,OR1A1,OR1E2,TRPV3 TRPV3 NA NA NA NA TRPV3 5583 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 3504662 3504760 3504711 Y NA TRPV3,SHPK,CTNS TRPV3 IMR90 Hi-C 24141950 SHPK 32856 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 4125491 4125809 4125534 Y NA ANKFY1 NA NA NA NA ANKFY1 39465 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 4297300 4297441 4297368 Y NA UBE2G1 UBE2G1,SPNS3,ANKFY1,ZZEF1,CYB5D2 IMR90 Hi-C 24141950 UBE2G1 29377 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 4811647 4812042 4811731 Y NA RNF167,SLC25A11,ENO3,PFN1 NA NA NA NA RNF167 29261 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 4934963 4935218 4935186 Y NA CAMTA2,KIF1C,ZFP3 NA NA NA NA KIF1C 35720 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 4950916 4951277 4951137 Y NA ZFP3 NA NA NA NA ZFP3 28266 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 5245508 5245890 5245691 Y NA NA NA NA NA NA RABEP1 61950 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 5430157 5430402 5430333 Y NLRP1 MIS12,DERL2 NA NA NA NA DERL2 42026 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 7738822 7740614 7739046 Y ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 18450 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 7746991 7747556 7747325 Y POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 11508 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr17 8029634 8030116 8029995 Y NA PER1,VAMP2,SNORD118,TMEM107 NA NA NA NA PER1 27708 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 8090038 8090540 8090163 Y NA PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB NA NA NA NA C17orf59 1024 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 8103328 8103700 8103595 Y NA PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,PFAS,CTC1 NA NA NA NA AURKB 8218 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 9155924 9156306 9156115 Y PIK3R5 NA NA NA NA NA STX8 321602 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 13102362 13102729 13102546 Y NA NA NA NA NA NA ELAC2 182858 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 13486545 13486641 13486589 Y NA HS3ST3A1 NA NA NA NA HS3ST3A1 16603 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 14206072 14206436 14206180 Y HS3ST3B1 HS3ST3B1 NA NA NA NA HS3ST3B1 3672 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 15923170 15923610 15923287 Y FAM18B2,ZNF286A,NCOR1,TTC19,ZSWIM7 TTC19,ZSWIM7 NA NA NA NA ZSWIM7 22139 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 16438910 16439232 16439111 Y NA ZNF287 NA NA NA NA ZNF287 31288 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 17655489 17655938 17655636 Y DRG2,ALKBH5,COPS3,MED9 NA NA NA NA NA RAI1 72702 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 17743258 17743857 17743527 Y SMCR8 SREBF1 NA NA NA NA SREBF1 4933 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 19411188 19411542 19411351 Y NA SLC47A1 EPN2,SLC47A2,B9D1,ALDH3A2,ALDH3A1,ULK2 IMR90 Hi-C 24141950 SLC47A1 14490 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 19656390 19656618 19656531 Y MAPK7,MAPK7 SLC47A2,ALDH3A1 NA NA NA NA ALDH3A1 6134 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 19913206 19913926 19913276 Y ULK2,AKAP10 AKAP10 NA NA NA NA AKAP10 33550 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 21002403 21002809 21002523 Y KCNJ18 DHRS7B USP22,C17orf103 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DHRS7B 21868 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 21179100 21179414 21179208 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 C17orf103,MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 6570 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 25409900 25410125 25410078 Y NA NA NA NA NA NA WSB1 208977 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 25659360 25659787 25659571 Y LGALS9,WSB1 WSB1 NA NA NA NA WSB1 40258 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 25672386 25672687 25672621 Y NA NA KSR1,MIR4522,WSB1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WSB1 53284 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 25680632 25681097 25680982 Y NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 61530 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 25821729 25821988 25821800 Y NA KSR1 NA NA NA NA KSR1 40059 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr17 27072804 27073286 27072989 Y TRAF4 PROCA1,RAB34,RPL23A,NEK8,TLCD1,TRAF4 NA NA NA NA TRAF4 3802 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 27619094 27619880 27619581 Y TAOK1 NA NA NA NA NA NUFIP2 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 27824938 27824945 27824941 Y TIAF1,MYO18A,TAOK1,EFCAB5,ANKRD13B NA NA NA NA NA TP53I13 66125 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 27966112 27966641 27966332 Y NA GIT1,CORO6 NA NA NA NA CORO6 18187 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 28258246 28258478 28258304 Y NA SSH2 NA NA NA NA SSH2 2952 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 29876692 29877391 29877039 Y NA NA NA NA NA NA RAB11FIP4 160050 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 30886393 30886627 30886490 Y NA NA NA NA NA NA CDK5R1 74756 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 32740110 32740340 32740257 Y NA NA NLE1,TMEM132E,CCT6B,ZNF830 IMR90 Hi-C 24141950 ZNF830 546209 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 33300552 33300861 33300820 Y NA ZNF830,LIG3,CCT6B NA NA NA NA LIG3 4652 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 33841707 33842053 33841976 Y SLFN5,SLFN12L,CCL5 NA UNC45B,SLFN13 IMR90 Hi-C 24141950 AP2B1 61012 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 34219582 34220299 34219858 Y CCL5,CCL3L3,CCL3L1,CCL4,CCL3,CCL23 RDM1 NA NA NA NA RDM1 35478 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 35296825 35297078 35296886 Y LHX1 AATF NA NA NA NA AATF 7097 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 36149249 36149375 36149312 Y HNF1B NA HNF1B,DDX52,SYNRG,LOC284100,DUSP14 IMR90 Hi-C 24141950 DDX52 147756 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 36412216 36412471 36412263 Y NA RP11-1407O15.2,MRPL45 NA NA NA NA RP11-1407O15.2 7387 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 36759357 36759542 36759426 Y NA SRCIN1 NA NA NA NA SRCIN1 641 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 36859613 36860666 36860145 Y NA C17orf96,CISD3,PCGF2,PSMB3 NA NA NA NA MLLT6 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 37910411 37911394 37910787 Y FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3 MIEN1,GRB7 NA NA NA NA GRB7 18231 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 38084566 38084955 38084762 Y NA ORMDL3 NA NA NA NA ORMDL3 2712 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 38674878 38675250 38674921 Y TMEM99,TMEM99,TMEM99,CDC6,TOP2A,TNS4 TNS4 IGFBP4,KRT42P,CCR7,RARA,GJD3,TOP2A,TNS4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNS4 19029 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 39685394 39685532 39685463 Y KRTAP2-1,KRTAP2-2,KRTAP9-1,KRTAP9-2,KRTAP9-9 KRT13,KRT15,KRT19 NA NA NA NA KRT19 2834 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 39835188 39835696 39835517 Y RAB5C,NKIRAS2,DHX58,EIF1 EIF1,GAST SMARCE1,KRT222,KRT28,KRT26,KRT27,TMEM99,KRT10,KRT20,KRTAP3-2,KRTAP3-3,KRT19,EIF1,HAP1,JUP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EIF1 7441 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 39949517 39949745 39949566 Y KRT36,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17,JUP JUP,LEPREL4,FKBP10 NA NA NA NA JUP 8334 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 40163251 40163440 40163343 Y NA CNP,NKIRAS2,DNAJC7 NA NA NA NA NKIRAS2 1851 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 41656262 41656390 41656311 Y G6PC3 ETV4 DHX8,MIR2117,MPP2 IMR90 Hi-C 24141950 ETV4 1274 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 41657407 41657423 41657415 Y MPP2 ETV4 DHX8,MIR2117,MPP2 IMR90 Hi-C 24141950 ETV4 2419 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 41686923 41687254 41687162 Y NA ETV4 DHX8,MEOX1,SOST IMR90 Hi-C 24141950 ETV4 31935 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 41796772 41797488 41797204 Y TMUB2,TMEM106A,DHX8,DUSP3 SOST LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 SOST 36668 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr17 42276572 42276897 42276785 Y TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3 TMUB2,ATXN7L3,UBTF NA NA NA NA ATXN7L3 1091 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 42634020 42634172 42634095 Y TMUB2,TMUB2,GRN,FZD2 NA NA NA NA NA GPATCH8 55222 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 43095998 43096402 43096133 Y NA NMT1,DCAKD NA NA NA NA NMT1 30576 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 43660811 43661173 43660906 Y ACBD4,FMNL1,PLEKHM1 RPS26P8,CRHR1 NA NA NA NA RPS26P8 22736 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 43863369 43863507 43863444 Y CRHR1 NA NA NA NA NA MAPT 106241 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 44232468 44232502 44232485 Y NA NA NA NA NA NA MAPT 262720 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 44344171 44344471 44344293 Y NA NA KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MAPT 374423 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr17 44847625 44847956 44847902 Y WNT3 NA NA NA NA NA RPS7P11 50092 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 44848812 44849347 44849259 Y NA NA NA NA NA NA RPS7P11 51279 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr17 45609469 45609601 45609554 Y NA NPEPPS NA NA NA NA NPEPPS 11161 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 45771013 45771467 45771041 Y NPEPPS,OSBPL7,CDK5RAP3,TBX21,TBKBP1 KPNB1,TBX21 NA NA NA NA TBX21 37143 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 46102426 46102830 46102617 Y NA COPZ2,NFE2L1 NA NA NA NA COPZ2 10562 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 46662223 46662405 46662377 Y NA HOXB-AS3,HOXB4,HOXB6,HOXB8,HOXB7 NA NA NA NA HOXB4 6750 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 46662684 46663231 46662943 Y HOXB2,HOXB3,HOXB4,HOXB9,HOXB8,HOXB7,HOXB6,HOXB5 HOXB-AS3,HOXB4,HOXB6,HOXB8,HOXB7 NA NA NA NA HOXB4 7211 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 47270202 47270509 47270359 Y CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3 PHOSPHO1 NA NA NA NA PHOSPHO1 35619 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr17 48066634 48067004 48066930 Y NA DLX4 NA NA NA NA DLX4 22300 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 48139711 48140314 48140012 Y XYLT2,LRRC59,EPN3,ITGA3 ITGA3,PDK2 NA NA NA NA ITGA3 8379 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 48942663 48943085 48943016 Y NA TOB1 NA NA NA NA TOB1 254 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 48996944 48997365 48997235 Y UTP18,RSAD1,TOB1 NA LOC400604,TOB1,WFIKKN2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 53605 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 54993018 54993544 54993286 Y SCPEP1,TRIM25 TRIM25,COIL DGKE MCF7 ChIA-PET 22265404 TRIM25 3619 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 55523126 55523573 55523446 Y NA NA NA NA NA NA MSI2 191914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 55706775 55707069 55706919 Y NA NA NA NA NA NA MRPS23 218348 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 55976255 55976501 55976378 Y OR4D2 NA NA NA NA NA MRPS23 50838 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 55977135 55977456 55977362 Y NA NA NA NA NA NA MRPS23 51718 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 56428194 56428499 56428372 Y VEZF1,MTMR4,SUPT4H1 NA NA NA NA NA SUPT4H1 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 56736656 56737064 56736885 Y MTMR4,SEPT4,SEPT4,PPM1E RNU1-60P,RNU1-85P,RAD51C SEPT4,C17orf47 K562,MCF7 ChIA-PET 22265404 RNU1-60P 1990 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57231102 57231481 57231293 Y C17orf71 AC099850.1,TRIM37,SKA2,PRR11 NA NA NA NA PRR11 242 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57831888 57832338 57832062 Y VMP1,RNFT1 VMP1,PTRH2 NA NA NA NA PTRH2 48901 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57863159 57864676 57863979 Y NA NA NA NA NA NA MIR21 51951 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57904186 57904344 57904253 Y VMP1,CA4 MIR21 NA NA NA NA MIR21 12283 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57922999 57923843 57923122 Y PTRH2,TUBD1,RPS6KB1,HEATR6 MIR21,TUBD1,RPS6KB1 NA NA NA NA MIR21 6372 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57952277 57952457 57952367 Y NA MIR21,TUBD1,RPS6KB1 NA NA NA NA TUBD1 15847 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 57975372 57975465 57975395 Y NA TUBD1,RPS6KB1 NA NA NA NA RPS6KB1 6925 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 58678620 58678973 58678714 Y PPM1D PPM1D NA NA NA NA PPM1D 3076 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 59645902 59646266 59646152 Y NA NACA2 NA NA NA NA NACA2 20297 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 59786803 59787088 59786946 Y NA NA NA NA NA NA NACA2 120240 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 59956289 59956463 59956377 Y NA BRIP1,INTS2 BRIP1 IMR90 Hi-C 24141950 BRIP1 17407 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 60085676 60086036 60086030 Y NACA2,MED13 NA NA NA NA NA MED13 54607 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 60141349 60141594 60141514 Y NACA2,MED13 MED13 INTS2 MCF7 ChIA-PET 22265404 MED13 706 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 60247601 60248070 60247921 Y MED13 NA NA NA NA NA MED13 106958 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 60970243 60970809 60970465 Y NA NA NA NA NA NA MRC2 267481 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 61787185 61787371 61787278 Y NA LIMD2,STRADA NA NA NA NA LIMD2 10653 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 61796482 61796787 61796636 Y NA LIMD2,STRADA NA NA NA NA LIMD2 19950 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 62484790 62485162 62485096 Y NA POLG2,CEP95,DDX5 NA NA NA NA POLG2 5992 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 62487438 62487665 62487534 Y ICAM2 POLG2,CEP95,DDX5 NA NA NA NA POLG2 3489 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 63050573 63051275 63051229 Y NA NA AMZ2P1 IMR90 Hi-C 24141950 GNA13 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 63060882 63060952 63060917 Y GNA13 GNA13 GNA13,RGS9 IMR90 Hi-C 24141950 GNA13 9925 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 63119249 63119621 63119552 Y GNA13 RGS9 RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RGS9 11928 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 63639930 63640399 63640359 Y NA NA NA NA NA NA RGS9 508381 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 64194072 64194322 64194164 Y NA CEP112 NA NA NA NA CEP112 7870 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 64544411 64544774 64544437 Y NA NA NA NA NA NA PRKCA 247657 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 65220181 65220399 65220279 Y NA HELZ,SNORA8 NA NA NA NA HELZ 19706 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr17 65470400 65470556 65470469 Y NA NA NA NA NA NA PITPNC1 98825 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 66016045 66016315 66016119 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 13320 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr17 66419326 66419636 66419592 Y NA WIPI1 NA NA NA NA WIPI1 32018 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 66509186 66509763 66509535 Y SLC16A6,PRKAR1A,PRKAR1A PRKAR1A NA NA NA NA PRKAR1A 3265 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 70398105 70398184 70398145 Y NA NA NA NA NA NA RPL32P33 223186 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 70407350 70407568 70407445 Y NA NA NA NA NA NA RPL32P33 213802 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 70443498 70443728 70443613 Y SOX9 NA NA NA NA NA RPL32P33 177642 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 70585200 70585480 70585419 Y NA RPL32P33,LINC00511 NA NA NA NA RPL32P33 35890 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 70628447 70628581 70628499 Y NA RPL32P33,LINC00511 NA NA NA NA LINC00511 6030 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr17 70706379 70706638 70706553 Y NA NA NA NA NA NA LINC00511 71768 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 71007352 71007521 71007427 Y NA NA NA NA NA NA SLC39A11 79330 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 71603632 71603970 71603800 Y NA SDK2 NA NA NA NA SDK2 34258 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 72637081 72637207 72637142 Y TTYH2,TTYH2,CD300A,CD300LB,CD300C,CD300LD,TMEM104,SLC16A5,CD300E,CD300LF NA C17orf77,CD300LD,RAB37,CD300LF,CD300E IMR90 Hi-C 24141950 SLC9A3R1 105584 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 72728741 72729539 72729096 Y KIF19,KCTD2,GRIN2C,FADS6,RAB37,RAB37,RAB37 SLC9A3R1,NAT9,TMEM104 NA NA NA NA SLC9A3R1 13252 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 72745955 72746124 72746086 Y NA SLC9A3R1,NAT9,TMEM104 NA NA NA NA SLC9A3R1 3164 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 72978355 72978661 72978434 Y KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L CDR2L,ICT1,KCTD2 CDR2L,ICT1,C17orf28,HN1 MCF7,K562 ChIA-PET 22265404 CDR2L 3066 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 73087456 73087829 73087515 Y NA ATP5H,SLC16A5,ARMC7,NT5C NA NA NA NA SLC16A5 5634 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 73120387 73120767 73120528 Y GRB2,GRB2,CD300LF,HN1,HN1,SLC16A5,NT5C SLC16A5,ARMC7,NT5C,HN1 NA NA NA NA NT5C 5123 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 73333353 73333637 73333600 Y H3F3B,GRB2,GRB2,GGA3 SLC25A19 NA NA NA NA SLC25A19 49762 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 73696530 73696897 73696707 Y SAP30BP,ITGB4,ITGB4 SAP30BP,RECQL5,ITGB4 NA NA NA NA ITGB4 18511 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 73718198 73718514 73718306 Y NA ITGB4,GALK1 NA NA NA NA ITGB4 2790 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 73719261 73719909 73719549 Y MRPS7,LLGL2,LOC100130933,EVPL,ITGB4,ITGB4 ITGB4,GALK1 NA NA NA NA ITGB4 3853 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 73805010 73805399 73805102 Y NA GALK1,UNK,H3F3B,WBP2 NA NA NA NA H3F3B 25036 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 73850621 73850811 73850693 Y GRB2,GRB2,SAP30BP,H3F3B,FAM100B,EVPL,ACOX1,UNC13D,WBP2,TRIM47 WBP2,TRIM47,TRIM65 NA NA NA NA WBP2 33 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 74117633 74117738 74117682 Y NA EXOC7 NA NA NA NA EXOC7 1976 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 74128444 74128992 74128680 Y LOC100130933,RECQL5,RECQL5,FOXJ1 EXOC7 NA NA NA NA EXOC7 12787 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 74258854 74259227 74259062 Y ST6GALNAC1 ATF4P3,RNF157 NA NA NA NA RNF157 24400 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 74341579 74341976 74341749 Y NA SPHK1,PRPSAP1 NA NA NA NA SPHK1 28689 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 74413626 74413718 74413672 Y NA SPHK1,PRPSAP1,UBE2O NA NA NA NA UBE2O 33570 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 74440987 74441354 74441087 Y NA UBE2O NA NA NA NA UBE2O 5934 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr17 74705254 74705618 74705431 Y MXRA7 MXRA7,JMJD6,METTL23,MFSD11,SRSF2 NA NA NA NA MXRA7 156 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr17 75094541 75094684 75094581 Y JMJD6,SEC14L1,SEC14L1,SEC14L1,SEC14L1 LINC00338,SEC14L1 NA NA NA NA LINC00338,SEC14L1 13743 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 75120383 75120864 75120582 Y JMJD6,SEC14L1,SEC14L1,SEPT9,SEPT9,SEC14L1,SEC14L1 LINC00338,SEC14L1 NA NA NA NA LINC00338,SEC14L1 39585 CAGE LC-1F hg19 FANTOM5 5.39840994307671 chr17 75160724 75161106 75160798 Y NA NA NA NA NA NA LINC00338,SEC14L1 79926 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 75422359 75422648 75422577 Y SEPT9,SEPT9,SEPT9,SEPT9 NA NA NA NA NA SEPT9 147708 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr17 75667082 75667363 75667223 Y NA NA TNRC6C,FLJ45079,LOC100507351 IMR90 Hi-C 24141950 RNU1-80P 246817 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 75769300 75769393 75769353 Y NA NA TNRC6C,LOC100507351 IMR90 Hi-C 24141950 RNU1-80P 144787 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 75954393 75954796 75954614 Y NA RNU1-80P,TNRC6C TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNU1-80P 40213 CAGE LC-1F hg19 FANTOM5 15.4240284087906 chr17 76195016 76195360 76195224 Y TMC6,TMC8,SOCS3,PGS1 SYNGR2,TK1,AFMID,BIRC5 BIRC5 IMR90 Hi-C 24141950 BIRC5 12907 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 76310071 76310633 76310436 Y CYTH1,SOCS3,PGS1 SOCS3 PGS1,DNAH17,SOCS3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS3 43525 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 76337607 76338208 76338068 Y USP36,CYTH1,SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 15950 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 76338337 76338836 76338651 Y USP36,CYTH1,SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 15322 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 76356993 76357093 76357047 Y SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 2835 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 76767876 76768189 76768026 Y SOCS3,PGS1,USP36,ENGASE,CYTH1 CYTH1 NA NA NA NA CYTH1 8190 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 77730841 77731207 77731024 Y CBX8,CBX2 CBX2,CBX8 NA NA NA NA CBX2 18724 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 77787297 77787609 77787349 Y NA CBX2,CBX8,CBX4 NA NA NA NA CBX8 13815 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 77817686 77818105 77817998 Y NA CBX8,CBX4 NA NA NA NA CBX4 6458 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 78228476 78228940 78228764 Y GAA,EIF4A3,SGSH,RNF213 SLC26A11,SGSH,RNF213 NA NA NA NA RNF213 3725 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 78304141 78304261 78304201 Y NPTX1 NA NA NA NA NA RNF213 71476 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 78428203 78429274 78428566 Y NA ENDOV NA NA NA NA ENDOV 41238 CAGE LC-1F hg19 FANTOM5 5.78401065329647 chr17 78459744 78459968 78459843 Y RPTOR NA NA NA NA NA RPL32P31 54035 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 78806684 78807307 78807121 Y C17orf56 NA NA NA NA NA CHMP6 156091 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79011145 79011369 79011293 Y BAIAP2 CHMP6,BAIAP2 NA NA NA NA BAIAP2 4197 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79068878 79069252 79068906 Y C17orf56 NA NA NA NA NA BAIAP2 61930 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79302809 79302914 79302847 Y NA SLC38A10 NA NA NA NA SLC38A10 35462 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79316253 79317268 79317090 Y NA SLC38A10 BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,C17orf56,C17orf89,LINC00482,MIR3186,C17orf70,FSCN2,NPLOC4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A10 48906 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79319325 79319648 79319507 Y FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1 NA BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A10 51978 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr17 79365060 79367456 79365203 Y NA NA NA NA NA NA SLC38A10 97713 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79368790 79369424 79369000 Y NA NA NA NA NA NA SLC38A10 101443 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79439092 79439387 79439261 Y PCYT2,FAM195B,C17orf90,C17orf70,ACTG1 RP13-766D20.1,RP13-766D20.2,ACTG1 NA NA NA NA RP13-766D20.1 38702 CAGE LC-1F hg19 FANTOM5 4.62720852263718 chr17 79448388 79448678 79448571 Y NPB,AATK,AZI1,BAHCC1 RP13-766D20.1,RP13-766D20.2,ACTG1 NA NA NA NA RP13-766D20.1 29411 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr17 79451287 79451558 79451462 Y AATK,AZI1,BAHCC1 RP13-766D20.1,RP13-766D20.2,ACTG1 NA NA NA NA RP13-766D20.1 26531 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 79779684 79779899 79779792 Y NA FAM195B,P4HB,ARHGDIA NA NA NA NA FAM195B 9279 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79942701 79942868 79942785 Y SLC16A3,NARF,CCDC57,C17orf62,C17orf62 PYCR1,ASPSCR1,LRRC45,STRA13,RAC3 NA NA NA NA ASPSCR1 10018 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79949658 79950000 79949804 Y SLC25A10,STRA13,LRRC45,FASN,DCXR,PCYT2,NOTUM,ASPSCR1 ASPSCR1,LRRC45,STRA13,RAC3,DCXR NA NA NA NA ASPSCR1 16975 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 79979263 79979824 79979465 Y NA ASPSCR1,LRRC45,STRA13,RAC3,DCXR,GPS1,RFNG,DUS1L NA NA NA NA LRRC45 85 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 80056613 80056910 80056718 Y C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN RFNG,DUS1L,FASN NA NA NA NA FASN 2405 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr17 80066063 80066430 80066275 Y GCGR,DCXR DUS1L,FASN NA NA NA NA FASN 11855 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 80549446 80549833 80549578 Y RAB40B,FN3K NA NA NA NA NA FOXK2 73857 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 80821746 80822299 80821973 Y HEXDC,C17orf62,C17orf62,NARF ZNF750 NA NA NA NA ZNF750 25292 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr17 80833209 80833609 80833394 Y ZNF750 ZNF750 NA NA NA NA ZNF750 36755 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr18 222573 222827 222703 Y NA THOC1 NA NA NA NA THOC1 43223 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 550761 551103 550932 Y NA RN7SKP146 COLEC12,THOC1,CLUL1 IMR90 Hi-C 24141950 RN7SKP146 33747 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 666183 666708 666437 Y THOC1,YES1,ENOSF1,ENOSF1 TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 9843 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 668283 668526 668405 Y THOC1,ENOSF1,ENOSF1 TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 11943 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 679559 679568 679564 Y NA TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 23219 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 711356 711474 711397 Y ENOSF1,ENOSF1 ENOSF1 NA NA NA NA ENOSF1 680 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 3623872 3624258 3624140 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 214266 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr18 3624338 3624601 3624482 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 214732 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 3741003 3741403 3741194 Y DLGAP1 NA NA NA NA NA TGIF1 331397 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 5895274 5895803 5895585 Y TMEM200C NA L3MBTL4 IMR90 Hi-C 24141950 EPB41L3 266575 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr18 6193210 6193559 6193391 Y NA NA NA NA NA NA L3MBTL4 219677 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 9219810 9220134 9219877 Y NA NA NA NA NA NA ANKRD12 85584 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 9434302 9434537 9434470 Y NA RALBP1 ANKRD12,TWSG1,CCDC165 IMR90 Hi-C 24141950 RALBP1 38470 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 11849903 11850727 11850169 Y MPPE1,CHMP1B CHMP1B NA NA NA NA CHMP1B 508 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 11947272 11947721 11947412 Y CHMP1B MPPE1,IMPA2 IMPA2,GNAL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IMPA2 31303 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr18 13446691 13446974 13446907 Y NA NA NA NA NA NA RNMT 277685 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 13564575 13564807 13564692 Y C18orf1 NA NA NA NA NA RNMT 159852 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 21945811 21945986 21945899 Y NA OSBPL1A NA NA NA NA OSBPL1A 29858 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 23657156 23657540 23657507 Y NA SS18 NA NA NA NA SS18 11641 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 23836366 23836416 23836389 Y TAF4B TAF4B NA NA NA NA TAF4B 32466 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 24120849 24120961 24120907 Y NA NA NA NA NA NA KCTD1 114404 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr18 26744101 26744374 26744185 Y NA NA NA NA NA NA CDH2 988691 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 29542474 29542964 29542885 Y RNF138 TRAPPC8 NA NA NA NA TRAPPC8 11375 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr18 31460453 31460828 31460641 Y NOL4,NOL4,NOL4 NA NA NA NA NA MAPRE2 1094064 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 32527945 32528002 32527974 Y DTNA,DTNA,DTNA,DTNA,DTNA,DTNA,ZNF397,MAPRE2 MAPRE2 NA NA NA NA MAPRE2 26890 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 33042995 33043415 33043130 Y MAPRE2 INO80C NA NA NA NA INO80C 32540 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 34532943 34533308 34533124 Y NA NA NA NA NA NA TPGS2 125785 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 34915511 34915689 34915620 Y NA NA NA NA NA NA TPGS2 508353 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 35143959 35144425 35144260 Y NA NA NA NA NA NA TPGS2 736801 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 45379355 45379691 45379492 Y NA NA NA NA NA NA SMAD2 75824 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 45541725 45542128 45542097 Y SMAD2,SMAD2 NA NA NA NA NA SMAD2 86210 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr18 45688048 45688324 45688110 Y NA NA NA NA NA NA SMAD2 232533 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 46502180 46502412 46502333 Y SMAD7 NA SMAD7,CTIF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CTIF 438763 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 46547875 46548139 46548027 Y NA NA SMAD7 MCF7 ChIA-PET 22265404 DYM 437578 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 48721492 48722312 48721913 Y SMAD4,MEX3C MEX3C NA NA NA NA MEX3C 20362 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 51675484 51675804 51675634 Y NA NA NA NA NA NA MBD2 73354 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 51773425 51773767 51773527 Y NA MBD2,POLI POLI MCF7 ChIA-PET 22265404 POLI 20007 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 51860775 51860976 51860876 Y NA NA NA NA NA NA POLI 67001 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 53041931 53042230 53042160 Y NA NA NA NA NA NA TCF4 287788 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 53060777 53060994 53060923 Y NA NA NA NA NA NA TCF4 269024 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 53087236 53087444 53087369 Y NA NA NA NA NA NA TCF4 242574 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 53177007 53177126 53177058 Y TCF4 NA NA NA NA NA TCF4 152892 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 55250571 55250884 55250819 Y FECH FECH,NARS NA NA NA NA FECH 1120 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 55756032 55756268 55756150 Y NA NA NA NA NA NA ATP8B1 287699 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 55957381 55957780 55957581 Y NA NA NA NA NA NA MALT1 378838 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 57274287 57274609 57274551 Y CCBE1 NA NA NA NA NA RPS26P54 152181 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 58951957 58952157 58952057 Y NA NA NA NA NA NA RPL30P14 118281 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 60193382 60194139 60194065 Y KIAA1468,PHLPP1,ZCCHC2 ZCCHC2 NA NA NA NA ZCCHC2 5142 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr18 60854025 60854354 60854177 Y NA NA NA NA NA NA BCL2 131007 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 61033511 61033750 61033687 Y NA BCL2,KDSR NA NA NA NA KDSR 768 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 65945074 65945279 65945262 Y NA NA LOC643542 IMR90 Hi-C 24141950 CCDC102B 435167 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 68004496 68004658 68004562 Y NA NA NA NA NA NA SOCS6 50359 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr18 72676291 72676559 72676424 Y ZNF407,TSHZ1 NA NA NA NA NA ZADH2 242744 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 72683878 72684340 72684028 Y NA NA NA NA NA NA ZADH2 234963 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 72694471 72694659 72694499 Y ZNF407 NA NA NA NA NA ZADH2 224644 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 74194351 74194716 74194640 Y NA ZNF516,RP11-17M16.1 NA NA NA NA ZNF516 10430 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 74205649 74206020 74205889 Y NA ZNF516,RP11-17M16.1 NA NA NA NA RP11-17M16.1 172 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 74277239 74277430 74277301 Y NA NA NA NA NA NA RP11-17M16.1 71762 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr18 74292470 74292738 74292612 Y NA NA NA NA NA NA RP11-17M16.1 86993 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 74830215 74830809 74830560 Y MBP NA NA NA NA NA ZNF236 297652 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 76574789 76574960 76574953 Y SALL3 NA NA NA NA NA ATP9B 252325 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr18 77682652 77682872 77682762 Y NA PQLC1,HSBP1L1 NA NA NA NA PQLC1 26792 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 289700 289869 289784 Y C2CD4C,C19orf21,PPAP2C,PPAP2C PPAP2C NA NA NA NA PPAP2C 307 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 290136 290651 290316 Y RNF126,GZMM,C19orf21,PPAP2C,PPAP2C PPAP2C NA NA NA NA PPAP2C 743 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 604629 604764 604680 Y THEG BSG,HCN2,POLRMT NA NA NA NA HCN2 16736 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 675402 675838 675677 Y FSTL3 POLRMT,RNF126,FSTL3,PALM NA NA NA NA FSTL3 1010 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 1169743 1170349 1170015 Y NA SBNO2,STK11 NA NA NA NA SBNO2 1933 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 1240232 1240534 1240365 Y MUM1,APC2,C19orf26 C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA ATP5D 483 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 1252961 1253429 1253036 Y C19orf22,ARID3A,CNN2,ABCA7,HMHA1,SBNO2,SBNO2,MIDN,CIRBP C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA CIRBP 3955 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 1266359 1266798 1266589 Y NA C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA C19orf24 6228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 1445282 1445452 1445336 Y C19orf26,EFNA2,MUM1,APC2 GAMT,DAZAP1,RPS15,C19orf25,PCSK4,REEP6 NA NA NA NA RPS15 8924 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 2061356 2061737 2061654 Y SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A BTBD2,MKNK2,MOB3A NA NA NA NA MKNK2 12113 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 2165096 2165788 2165320 Y REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L DOT1L,AP3D1 NA NA NA NA AP3D1 2632 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 2330710 2331138 2330903 Y NA SPPL2B,LSM7 NA NA NA NA LSM7 4091 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3035530 3035851 3035686 Y NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2 AES NA NA NA NA AES 25254 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3177322 3177366 3177344 Y AES,S1PR4 GNA15,NCLN,CELF5 NA NA NA NA NCLN 6195 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3222791 3223093 3222942 Y NA NCLN,CELF5 NA NA NA NA CELF5 90 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3369394 3369884 3369615 Y NA NFIC NA NA NA NA NFIC 11833 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3484915 3485311 3484976 Y NA DOHH,FZR1 NA NA NA NA DOHH 13627 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3683675 3684043 3683874 Y NA PIP5K1C NA NA NA NA PIP5K1C 14434 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 3693047 3693257 3693152 Y RAX2 PIP5K1C NA NA NA NA PIP5K1C 5220 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 4061318 4061457 4061400 Y SEMA6B,PLIN5,ZBTB7A ZBTB7A NA NA NA NA ZBTB7A 3486 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 4084320 4084813 4084566 Y NA ZBTB7A,MAP2K2 NA NA NA NA ZBTB7A 19377 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 5139337 5139604 5139434 Y NA NA NA NA NA NA RPL32P34 136141 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 5435162 5435432 5435167 Y NA NA KDM4B,PTPRS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPRS 96348 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 6108691 6108922 6108748 Y NA NA NA NA NA NA RFX2 88661 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 6539979 6540238 6540076 Y NA TUBB4A,TNFSF9 NA NA NA NA TNFSF9 10969 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 7746304 7746484 7746360 Y ARHGEF18,PEX11G,MCOLN1,PNPLA6,XAB2,LOC100131801,STXBP2,MAP2K7,EVI5L,RETN,C19orf59 STXBP2,TRAPPC5 NA NA NA NA TRAPPC5 2575 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 7756040 7757119 7756175 Y ARHGEF18,FBN3,MAP2K7,FLJ22184,EVI5L,FCER2,FCER2 TRAPPC5 NA NA NA NA TRAPPC5 12311 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 7816227 7816567 7816322 Y XAB2,FCER2 NA NA NA NA NA TRAPPC5 72498 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 9758216 9758505 9758322 Y ZNF559,ZNF559,ZNF559-ZNF177,ZNF846 ZNF561,ZNF562,RPS4XP22 NA NA NA NA ZNF562 25271 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 9776683 9777096 9776903 Y OR7D4,ZNF559,ZNF559,ZNF559-ZNF177,ZNF177,ZNF426,ZNF121,ZNF846,OLFM2 ZNF561,ZNF562,RPS4XP22,ZNF812 NA NA NA NA ZNF562 6680 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 9896233 9896620 9896495 Y ZNF266,COL5A3,ZNF846 FBXL12,UBL5,PIN1 NA NA NA NA FBXL12 39872 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 10056236 10056512 10056406 Y ZNF846,COL5A3,OLFM2 OLFM2 NA NA NA NA OLFM2 11008 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 10352370 10352740 10352555 Y KRI1,ILF3,PPAN,RAVER1,MRPL4,DNMT1 S1PR2,DNMT1,MRPL4 MRPL4,ICAM1 IMR90 Hi-C 24141950 MRPL4 7837 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 10515339 10515636 10515481 Y PDE4A,PDE4A TYK2,MIR1181 NA NA NA NA MIR1181 3125 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 11202212 11202837 11202668 Y ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR LDLR NA NA NA NA LDLR 4174 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 11206953 11207150 11207057 Y ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR LDLR NA NA NA NA LDLR 8915 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 13024998 13025376 13025029 Y NA HOOK2,DNASE2,GCDH,FARSA,CALR,RAD23A,GADD45GIP1 NA NA NA NA FARSA 17475 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 13957204 13959386 13957586 Y NA NA NA NA NA NA ZSWIM4 52930 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 14084978 14085262 14085120 Y NA DCAF15,RFX1 NA NA NA NA DCAF15 23674 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 14274504 14274771 14274661 Y C19orf57,RFX1,LPHN1 PRKACA,ASF1B,LPHN1 NA NA NA NA ASF1B 28736 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 14636614 14636887 14636775 Y OR7C2 GIPC1,TECR,DNAJB1,NDUFB7 NA NA NA NA DNAJB1 1695 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 14732511 14733275 14733016 Y SYDE1 NA NA NA NA NA NDUFB7 51637 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 15947617 15948119 15947980 Y AKAP8,AKAP8L,RASAL3,OR10H3,OR10H4,RAB8A,KLF2,AP1M1 NA NA NA NA NA CYP4F11 95558 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 16188924 16190024 16189835 Y TPM4 TPM4,RAB8A NA NA NA NA TPM4 13093 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 16574808 16575111 16574962 Y NA EPS15L1,CALR3,C19orf44 NA NA NA NA EPS15L1 5785 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 17345747 17345835 17345791 Y NA USE1,OCEL1,NR2F6,BABAM1 NA NA NA NA NR2F6 8914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 17371801 17372164 17371849 Y NXNL1,GTPBP3 USE1,OCEL1,NR2F6,BABAM1,MRPL34,DDA1,ABHD8 NR2F6 K562 ChIA-PET 22265404 BABAM1 3995 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 18133045 18133309 18133130 Y FAM129C,MAP1S,FCHO1,FCHO1,LRRC25,IFI30,ELL,ARRDC2,ARRDC2 NA NA NA NA NA MAST3 73294 CAGE LC-1F hg19 FANTOM5 5.39840994307671 chr19 18134654 18135106 18134872 Y MAP1S,LRRC25,JUND,IFI30,ELL,ARRDC2,ARRDC2,IL12RB1 NA NA NA NA NA MAST3 71497 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 18497624 18497977 18497708 Y PDE4C,GDF15 PGPEP1,GDF15,SSBP4 NA NA NA NA GDF15 14083 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 18512599 18512849 18512719 Y IFI30,UBA52,LRRC25 GDF15,SSBP4 LRRC25 K562 ChIA-PET 22265404 SSBP4 14825 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 18630929 18631259 18631008 Y UPF1,IFI30,JUND,PGPEP1,LRRC25,ELL FKBP8,KXD1,UBA52 NA NA NA NA ELL 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 19483893 19484092 19484012 Y NA GATAD2A NA NA NA NA GATAD2A 10543 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 20162886 20163252 20163139 Y ZNF506,ZNF253,ZNF682,ZNF682 ZNF682,AC006539.2 ZNF682,LOC284440 MCF7 ChIA-PET 22265404 ZNF682 14571 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 20337633 20337845 20337749 Y ZNF93,ZNF682,ZNF682,ZNF90,ZNF486 NA NA NA NA NA ZNF486 61596 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 23530488 23530791 23530760 Y NA ZNF91 NA NA NA NA ZNF91 45571 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 28170167 28170385 28170313 Y NA NA NA NA NA NA UQCRFS1 1532063 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 28211511 28212598 28211607 Y NA NA NA NA NA NA UQCRFS1 1489850 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 29702850 29703471 29703365 Y NA UQCRFS1 NA NA NA NA UQCRFS1 402 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 30206961 30207337 30207149 Y NA C19orf12 NA NA NA NA C19orf12 2597 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 31841682 31842327 31842237 Y NA TSHZ3 NA NA NA NA TSHZ3 3229 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 34310855 34311133 34311012 Y NA KCTD15 NA NA NA NA KCTD15 26017 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 34396925 34397389 34397012 Y NA NA KCTD15 MCF7 ChIA-PET 22265404 KCTD15 112087 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 34398114 34398257 34398186 Y NA NA KCTD15 MCF7 ChIA-PET 22265404 KCTD15 113276 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 34625713 34625998 34625854 Y PDCD2L LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 35411 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 34850085 34850642 34850351 Y ZNF599,ZNF302,ZNF181 GPI,PDCD2L NA NA NA NA GPI 1700 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 35557782 35557965 35557875 Y MAG,SCGBL,ZNF302,ZNF181,ZNF30,HPN,LGI4 FXYD3 NA NA NA NA FXYD3 46767 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 35595565 35595951 35595710 Y ZNF181,ZNF30 FXYD3,FXYD7,FXYD5 NA NA NA NA FXYD3 8781 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 36448313 36448413 36448320 Y ZNF565,ZNF565,ZFP14,APLP1 LRFN3,SDHAF1 NA NA NA NA LRFN3 24053 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 36618643 36619171 36618835 Y NA TBCB,POLR2I,CAPNS1 NA NA NA NA CAPNS1 9306 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 38717073 38717581 38717079 Y NA DPF1,SPINT2 NA NA NA NA DPF1 773 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 38719187 38719304 38719247 Y ZNF573,DPF1,PPP1R14A,DPF1 DPF1,SPINT2 NA NA NA NA DPF1 833 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 39411140 39411539 39411467 Y LGALS7 RINL,NFKBIB,SIRT2,MRPS12,SARS2 NA NA NA NA MRPS12 7649 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 39921308 39921946 39921495 Y GMFG,SAMD4B,PAF1,MED29,ZFP36,PLEKHG2 PAF1,MED29,ZFP36,RPS16,SUPT5H,TIMM50 NA NA NA NA RPS16 2642 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 40315090 40315548 40315357 Y NA DYRK1B,FBL NA NA NA NA DYRK1B 7293 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 41108162 41108528 41108432 Y NA SHKBP1,LTBP4 NA NA NA NA LTBP4 11373 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 41695552 41695583 41695568 Y NA RPL36P16,CYP2S1 NA NA NA NA CYP2S1 1371 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 41701582 41701929 41701850 Y CYP2A13,CYP2F1 RPL36P16,CYP2S1 NA NA NA NA CYP2S1 4628 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 42432096 42432209 42432128 Y NA ARHGEF1,RABAC1 NA NA NA NA RABAC1 29333 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 42501283 42501478 42501381 Y TMEM145 RABAC1,ATP1A3 NA NA NA NA ATP1A3 1634 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 42722677 42722859 42722787 Y NA DEDD2,ZNF526,GSK3A,ERF NA NA NA NA ZNF526 254 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr19 42772295 42772768 42772477 Y NA ZNF526,GSK3A,ERF,PAFAH1B3,TMEM145 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 14986 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 42772804 42773312 42773020 Y CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE GSK3A,ERF,PAFAH1B3,TMEM145 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 15495 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 42774379 42774759 42774668 Y CEACAM8,CEACAM3,ARHGEF1,ZNF574,POU2F2,DEDD2,ERF,CIC GSK3A,ERF,PAFAH1B3,TMEM145 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 17070 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 42784087 42784212 42784170 Y CEACAM8,CEACAM3,DEDD2 GSK3A,ERF,PAFAH1B3,TMEM145,MEGF8 NA NA NA NA PAFAH1B3 21486 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 42784527 42784991 42784716 Y ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8 GSK3A,ERF,PAFAH1B3,TMEM145,MEGF8 NA NA NA NA PAFAH1B3 20707 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 42902919 42903213 42903066 Y TMEM145 CNFN CNFN MCF7 ChIA-PET 22265404 CNFN 10480 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 43974415 43974832 43974599 Y NA LYPD3,PHLDB3 LYPD3 K562 ChIA-PET 22265404 LYPD3 6603 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 45100230 45100376 45100298 Y NA PVR CEACAM16,TOMM40,PVR,MIR4531,IGSF23 IMR90 Hi-C 24141950 PVR 44722 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 45279679 45279961 45279836 Y CEACAM19,CBLC,BCAM BCL3,CBLC,BCAM NA NA NA NA CBLC 553 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 45393623 45393866 45393750 Y ZNF285,ZNF180,GEMIN7,GEMIN7,CLASRP,TOMM40 PVRL2,TOMM40 NA NA NA NA TOMM40 1797 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr19 45584780 45584791 45584786 Y CEACAM16,NKPD1 CLASRP,ZNF296,GEMIN7,MARK4,PPP1R37 NA NA NA NA MARK4 4234 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 45803954 45804164 45804074 Y NA KLC3 NA NA NA NA KLC3 30528 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 45946690 45947113 45946759 Y GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2 K562,MCF7 ChIA-PET 22265404 FOSB 22140 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 45953262 45953678 45953446 Y GIPR,RELB,CLASRP,BLOC1S3,PPM1N,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 15575 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 45953764 45954783 45954182 Y NA CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 14470 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 46361761 46362096 46361929 Y NA SYMPK,IRF2BP1,MYPOP NA NA NA NA SYMPK 2452 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 46386037 46386278 46386146 Y OPA3,GIPR,FBXO46,SYMPK,FOXA3 SYMPK,IRF2BP1,MYPOP NA NA NA NA IRF2BP1 1098 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 46683956 46684315 46684191 Y NA NA NA NA NA NA PPP5C 163936 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 46877153 46877367 46877269 Y NA PPP5C NA NA NA NA PPP5C 28902 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr19 46905606 46905628 46905621 Y NA NA NA NA NA NA PPP5C 57355 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 46930027 46930174 46930086 Y NA NA CCDC8,LOC100506012 IMR90 Hi-C 24141950 PPP5C 81776 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 47062362 47062544 47062453 Y NA GAPDHP38,CALM3 NA NA NA NA GAPDHP38 2464 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 47142195 47142976 47142503 Y NA CALM3 NA NA NA NA CALM3 39864 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 47363167 47364689 47363471 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562 ChIA-PET 22265404 AP2S1 10918 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr19 47599577 47599849 47599731 Y NA TMEM160,SAE1,ZC3H4 NA NA NA NA SAE1 14682 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 47610820 47611121 47611012 Y NA SAE1,ZC3H4 TMEM160,NPAS1 IMR90 Hi-C 24141950 SAE1 3410 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 47611153 47611400 47611382 Y NA SAE1,ZC3H4 TMEM160,NPAS1 IMR90 Hi-C 24141950 SAE1 3131 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 47613231 47613789 47613256 Y PRKD2,STRN4,NAPA,GPR77,DHX34,CCDC9,C5AR1,BBC3,ZC3H4 SAE1,ZC3H4 TMEM160,NPAS1 IMR90 Hi-C 24141950 SAE1 742 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 47746329 47746738 47746506 Y SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24 BBC3,CCDC9,PRR24 NA NA NA NA CCDC9 10499 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 47776748 47776969 47776841 Y GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1 BBC3,CCDC9,PRR24 NA NA NA NA PRR24 606 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr19 47950200 47950556 47950503 Y SLC8A2 MEIS3,KPTN NA NA NA NA MEIS3 29420 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 48103581 48103982 48103689 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 NA GLTSCR1,NAPA MCF7 ChIA-PET 22265404 NAPA 87084 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 48222362 48222481 48222377 Y SEPW1,PLA2G4C,MEIS3,SLC8A2 EHD2,GLTSCR2 NA NA NA NA EHD2 7762 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 48903013 48903207 48903134 Y PPP1R15A,EMP3,FUT1,IZUMO1 TMEM143,KDELR1,GRWD1 NA NA NA NA KDELR1 10203 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 48927915 48927964 48927940 Y NA KDELR1,GRWD1,CYTH2 NA NA NA NA GRWD1 19066 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 49092091 49092636 49092297 Y BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11 SULT2B1,SPHK2,RPL18,DBP NA NA NA NA SPHK2 27912 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 49465555 49466264 49465736 Y IZUMO1,PPP1R15A,CD37,FTL DHDH,BAX,FTL,GYS1,RUVBL2 NA NA NA NA FTL 294 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr19 49466802 49467527 49467169 Y IZUMO1,PPP1R15A,CD37,FTL DHDH,BAX,FTL,GYS1,RUVBL2 NA NA NA NA FTL 244 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr19 49521043 49521282 49521101 Y NA GYS1,RUVBL2 NA NA NA NA RUVBL2 26338 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 49924099 49924476 49924276 Y TBC1D17,RRAS,RCN3,PRR12,NOSIP,AP2A1 ALDH16A1,PIH1D1 NA NA NA NA ALDH16A1 29950 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 50090402 50090603 50090503 Y NA NOSIP,PRR12 NA NA NA NA NOSIP 916 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 50767789 50767910 50767850 Y IZUMO2 NA NA NA NA NA NR1H2 63000 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 50872495 50872846 50872654 Y NA NR1H2,KCNC3,POLD1 NA NA NA NA POLD1 12615 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr19 51059944 51060288 51060130 Y NA JOSD2,LRRC4B NA NA NA NA LRRC4B 9014 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr19 51111018 51111676 51111369 Y NA LRRC4B,C19orf81 NA NA NA NA C19orf81 39026 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 51197974 51198378 51198356 Y NA C19orf81 NA NA NA NA C19orf81 47272 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 51287900 51288107 51288100 Y NA C19orf48 NA NA NA NA C19orf48 18079 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 52192085 52192767 52192400 Y ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577 NA NA NA NA NA ZNF175 119534 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 53727403 53727861 53727738 Y NA ZNF677 NA NA NA NA ZNF677 28290 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr19 54828104 54828567 54828302 Y NA NA NA NA NA NA RPS9 125494 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 55909655 55909755 55909754 Y PPP1R12C,TMEM150B TMEM238,RPL28,UBE2S NA NA NA NA UBE2S 7390 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 56116208 56117068 56116734 Y NA ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2 NA NA NA NA FIZ1 4872 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 56621885 56622165 56622061 Y NA ZNF787,ZNF444 NA NA NA NA ZNF787 8484 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 57976528 57976751 57976646 Y NA ZNF749,VN1R1,ZNF772,ZNF419,ZNF773 NA NA NA NA ZNF772 10187 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr19 58237757 58238155 58237774 Y NA ZNF551,ZNF776,ZNF586 ZNF154 IMR90 Hi-C 24141950 ZNF776 18009 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 58415823 58415990 58415970 Y NA ZNF417,ZNF256 NA NA NA NA ZNF417 9988 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 58532436 58532530 58532517 Y NA CTD-2368P22.1,ZNF606 NA NA NA NA ZNF606 19719 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 58912594 58912944 58912773 Y ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324 A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF132,ZNF324B NA NA NA NA ZNF584 1723 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr19 59029635 59029989 59029796 Y NA SLC27A5,ZBTB45,TRIM28,CHMP2A,UBE2M SLC27A5 MCF7 ChIA-PET 22265404 SLC27A5 7855 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr19 59049687 59049971 59049795 Y ZNF135,ZSCAN18,ZNF544,ZNF8,ZNF497,ZNF324B,ZNF324,UBE2M,TRIM28 SLC27A5,ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1 NA NA NA NA ZBTB45 1409 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 2617084 2617480 2617333 Y NA NA NA NA NA NA TSSC1 762173 CAGE LC-1F hg19 FANTOM5 5.78401065329647 chr2 8743061 8743194 8743128 Y ID2 AC011747.4 LOC100506274,ID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AC011747.4 21139 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 9411571 9411694 9411610 Y ADAM17 NA NA NA NA NA ASAP2 66677 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 9688603 9688902 9688848 Y ADAM17 ADAM17 NA NA NA NA ADAM17 5019 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 10075100 10075410 10075131 Y TAF1B GRHL1 GRHL1 IMR90 Hi-C 24141950 GRHL1 7931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 10258344 10258406 10258377 Y NA CYS1,RRM2 NA NA NA NA RRM2 2049 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr2 10260365 10260994 10260486 Y ODC1,TAF1B,RRM2,RRM2 CYS1 NA NA NA NA RRM2 0 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr2 10441145 10441558 10441458 Y KLF11 HPCAL1 ODC1 IMR90 Hi-C 24141950 HPCAL1 130 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 10549320 10549595 10549372 Y HPCAL1,HPCAL1 ODC1,RP11-320M2.1 NA NA NA NA ODC1 37035 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 11270081 11270242 11270156 Y KCNF1,C2orf50 PQLC3 NA NA NA NA PQLC3 23082 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr2 11970305 11970612 11970555 Y NA NA NA NA NA NA LPIN1 154584 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 12417696 12417905 12417812 Y TRIB2 NA LOC100506474 IMR90 Hi-C 24141950 TRIB2 437110 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 12860025 12860219 12860122 Y NA TRIB2 NA NA NA NA TRIB2 5010 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 16123687 16124268 16124038 Y NBAS,DDX1,MYCN MYCN NA NA NA NA MYCN 45001 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 16152892 16153059 16152979 Y NBAS NA NA NA NA NA MYCN 74206 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 16894320 16894588 16894473 Y NA FAM49A NA NA NA NA FAM49A 48721 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 19986322 19986559 19986384 Y TTC32 NA NA NA NA NA TTC32 113188 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 20379968 20380084 20380011 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 43110 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 20417309 20417694 20417511 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 5500 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 20768809 20769168 20769133 Y RHOB,GDF7 NA RHOB,HS1BP3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HS1BP3 79681 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 20965440 20965780 20965672 Y NA NA NA NA NA NA C2orf43 55102 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 23923305 23923445 23923375 Y NA NA NA NA NA NA ATAD2B 224539 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 24852047 24852369 24852206 Y NA NA NA NA NA NA CENPO 161636 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 25508945 25509154 25508991 Y DNAJC27,DNMT3A NA NA NA NA NA DNMT3A 54305 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 26220678 26220902 26220866 Y RAB10 KIF3C,RAB10 ASXL2,RAB10,FAM59B,KIF3C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIF3C 17060 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 26328559 26328812 26328686 Y FAM59B,RAB10 NA NA NA NA NA RAB10 73583 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 27304052 27304486 27304234 Y CENPA,CENPA,DPYSL5,SLC5A6,PPM1G,GTF3C2,CAD,CGREF1 AGBL5,OST4,KHK,CGREF1,ABHD1 NA NA NA NA KHK 3129 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 27942982 27943239 27943170 Y RBKS MRPL33 RBKS,BRE,LOC100505716,FOSL2,PLB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL33 49345 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 28567642 28567818 28567722 Y NA FOSL2 NA NA NA NA FOSL2 45497 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 28659517 28659673 28659646 Y NA FOSL2 FOSL2 MCF7 ChIA-PET 22265404 FOSL2 46202 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 28976141 28976573 28976382 Y FOSL2,PPP1CB,PPP1CB,TRMT61B PPP1CB SPDYA IMR90 Hi-C 24141950 PPP1CB 3635 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 29026080 29026331 29026243 Y FOSL2,PPP1CB,PPP1CB NA NA NA NA NA PPP1CB 53574 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 29173330 29173730 29173529 Y PPP1CB,PPP1CB,TRMT61B,WDR43 NA NA NA NA NA WDR43 57821 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 29331222 29331429 29331307 Y NA CLIP4 CLIP4 MCF7 ChIA-PET 22265404 CLIP4 12651 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 29339148 29339698 29339489 Y NA CLIP4 NA NA NA NA CLIP4 20577 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 29349196 29349466 29349333 Y NA CLIP4 NA NA NA NA CLIP4 30625 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr2 30807812 30808169 30807846 Y NA NA NA NA NA NA LCLAT1 139720 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 33295461 33295712 33295665 Y NA NA NA NA NA NA TTC27 444362 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 35360558 35360702 35360630 Y NA NA NA NA NA NA CRIM1 1220367 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 36712578 36712925 36712822 Y CRIM1,FEZ2 NA NA NA NA NA CRIM1 131509 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 36790074 36790520 36790216 Y NA NA NA NA NA NA FEZ2 80710 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 37858321 37858709 37858681 Y EIF2AK2,CDC42EP3 NA NA NA NA NA CDC42EP3 104902 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 37860871 37861279 37860884 Y EIF2AK2,EIF2AK2,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 102332 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 37883470 37883595 37883540 Y NA NA NA NA NA NA CDC42EP3 80016 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 37893644 37893973 37893812 Y QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 69638 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 37897080 37897760 37897461 Y QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 65851 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 38265039 38265434 38265056 Y CDC42EP3,CYP1B1 NA NA NA NA NA CYP1B1 69610 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 38368766 38369153 38368894 Y CYP1B1 CYP1B1 NA NA NA NA CYP1B1 33722 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 39078847 39079086 39078967 Y NA DHX57,MORN2 NA NA NA NA DHX57 21989 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 42161610 42162017 42161892 Y NA NA NA NA NA NA PKDCC 111143 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 43037224 43037999 43037611 Y NA NA THADA,ZFP36L2,LOC100129726,HAAO IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MTA3 317515 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr2 43530162 43530544 43530351 Y NA NA LOC100129726,ZFP36L2 MCF7 ChIA-PET 22265404 ZFP36L2 78414 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 45834799 45835123 45834961 Y NA SRBD1,PRKCE NA NA NA NA SRBD1 2181 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 46525633 46526278 46526263 Y NA EPAS1 NA NA NA NA EPAS1 6827 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 48709527 48709805 48709665 Y FOXN2,KLRAQ1 PPP1R21,STON1 NA NA NA NA PPP1R21 43790 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 51010628 51010803 51010737 Y NRXN1,NRXN1 NA NA NA NA NA STON1 2256106 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 54196339 54196842 54196524 Y ASB3,ASB3,PSME4 ACYP2,PSME4 NA NA NA NA PSME4 362 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 54800045 54800558 54800206 Y SPTBN1 NA NA NA NA NA SPTBN1 118623 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 55193261 55193511 55193360 Y NA NA NA NA NA NA RTN4 144246 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 55248216 55248544 55248355 Y NA NA NA NA NA NA RTN4 89213 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 55450545 55450658 55450592 Y CCDC88A,EML6,RTN4 RPS27A,MTIF2 NA NA NA NA RPS27A 6381 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 60694839 60695290 60695042 Y PAPOLG,BCL11A NA NA NA NA NA BCL11A 83412 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 60747849 60747913 60747881 Y PEX13,BCL11A BCL11A NA NA NA NA BCL11A 30789 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 60757464 60757761 60757646 Y NA BCL11A NA NA NA NA BCL11A 20941 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 60776650 60777166 60776879 Y REL,BCL11A BCL11A NA NA NA NA BCL11A 1536 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 60962204 60962802 60962781 Y NA PAPOLG NA NA NA NA PAPOLG 18563 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr2 61580039 61580318 61580309 Y NA NA NA NA NA NA USP34 115586 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 61698926 61699282 61699220 Y PUS10,AHSA2,USP34 USP34 NA NA NA NA USP34 3022 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 61921641 61922071 61921953 Y NA NA NA NA NA NA FAM161A 157207 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 61991278 61991660 61991557 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM161A 87618 CAGE LC-1F hg19 FANTOM5 5.78401065329647 chr2 62534127 62534336 62534147 Y NA NA COMMD1 IMR90 Hi-C 24141950 B3GNT2 112879 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 62689007 62689250 62689129 Y NA TMEM17 EHBP1,COMMD1,OTX1,LOC100132215,TMEM17 IMR90 Hi-C 24141950 TMEM17 47779 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 63129477 63129780 63129501 Y NA NA NA NA NA NA OTX1 145412 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 64367846 64368162 64368149 Y NA AC074289.1,PELI1 NA NA NA NA AC074289.1 211 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 64772977 64773339 64773158 Y SLC1A4,AFTPH AFTPH NA NA NA NA AFTPH 23512 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 64836549 64836646 64836605 Y SLC1A4,PELI1,SERTAD2,AFTPH NA NA NA NA NA AFTPH 87084 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 64879120 64879608 64879340 Y NA NA LOC339807 IMR90 Hi-C 24141950 SERTAD2 96531 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 64879615 64879792 64879667 Y SERTAD2 NA LOC339807 IMR90 Hi-C 24141950 SERTAD2 96347 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 65583296 65583698 65583484 Y NA NA NA NA NA NA SPRED2 74073 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 65634027 65634394 65634212 Y NA SPRED2 NA NA NA NA SPRED2 23377 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 67486839 67487275 67486977 Y NA NA MEIS1,ETAA1,LOC644838,C1D IMR90 Hi-C 24141950 ETAA1 135176 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 68432380 68432395 68432387 Y NA WDR92,PNO1,PPP3R1 NA NA NA NA PPP3R1 48974 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 69663778 69663884 69663817 Y AAK1 NFU1 NA NA NA NA NFU1 1018 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 69989990 69990667 69990520 Y NA NA GMCL1 IMR90 Hi-C 24141950 GMCL1 64107 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 71022127 71022451 71022314 Y FIGLA ADD2 NA NA NA NA ADD2 28770 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 72774678 72774916 72774797 Y NA NA NA NA NA NA EXOC6B 276254 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 74048537 74048653 74048596 Y MTHFD2,MOBKL1B DUSP11,STAMBP NA NA NA NA STAMBP 5433 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 74152201 74152400 74152268 Y NA DGUOK NA NA NA NA DGUOK 248 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 75141745 75142080 75142074 Y NA POLE4 NA NA NA NA POLE4 41539 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 77536393 77536550 77536540 Y LRRTM4 NA NA NA NA NA AC105399.2 476958 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 81709176 81709459 81709306 Y NA NA NA NA NA NA SUCLG1 2975710 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 84299529 84299779 84299675 Y NA NA NA NA NA NA SUCLG1 385390 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 89137813 89138196 89138064 Y EIF2AK3 NA NA NA NA NA RPIA 148651 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 98389575 98389609 98389594 Y NA NA NA NA NA NA ACTR1B 111005 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 98822932 98823207 98823080 Y NA NA NA NA NA NA TMEM131 212544 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 100104968 100105518 100105262 Y REV1 REV1 NA NA NA NA REV1 471 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 101270237 101270473 101270387 Y RPL31 NA NPAS2 IMR90 Hi-C 24141950 PDCL3 93085 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 101923239 101923757 101923472 Y RPL31,MAP4K4,MAP4K4,RNF149 SNORD89,RNF149 NA NA NA NA RNF149 76 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 105129772 105130007 105129890 Y NA NA NA NA NA NA MRPS9 522434 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 106474357 106474542 106474414 Y NA NA NA NA NA NA NCK2 115003 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 111879046 111879315 111879118 Y NA BCL2L11 NA NA NA NA BCL2L11 4091 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 112251481 112251757 112251540 Y BCL2L11 NA NA NA NA NA BCL2L11 376526 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 112420062 112420336 112420200 Y NA NA BCL2L11,ACOXL IMR90 Hi-C 24141950 ANAPC1 219931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 112456456 112456792 112456629 Y NA NA BCL2L11,ACOXL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANAPC1 183475 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 113341105 113341247 113341152 Y POLR1B POLR1B,CHCHD5 NA NA NA NA CHCHD5 1288 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 113450039 113450435 113450231 Y IL36B,IL36G,PSD4,IL1RN,IL1B,IL1A SLC20A1 SLC20A1,FLJ42351 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC20A1 48605 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 113450750 113451037 113450852 Y NA SLC20A1 SLC20A1,FLJ42351 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC20A1 49316 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 113635122 113635394 113635287 Y NA NA IL1B,CKAP2L,IL37,IL1A IMR90 Hi-C 24141950 CKAP2L 114868 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 113847761 113847860 113847813 Y IL1A,IL1B,IL37,IL36G,CBWD2,IL36B,IL1F10,IL1RN NA NA NA NA NA CKAP2L 327507 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 113882661 113883329 113882998 Y IL1A,IL1B,IL36G,CBWD2,IL36B,IL1RN NA NA NA NA NA CKAP2L 362407 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 114469366 114469830 114469722 Y SLC35F5 SLC35F5 NA NA NA NA SLC35F5 42570 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 114652011 114652405 114652035 Y CBWD2,ACTR3 ACTR3 NA NA NA NA ACTR3 6474 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 116469497 116469517 116469506 Y NA NA NA NA NA NA DPP10 1271621 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 118309015 118309417 118309218 Y NA NA NA NA NA NA DDX18 260809 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 118578074 118578451 118578195 Y CCDC93,DDX18 DDX18 NA NA NA NA DDX18 7848 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 119067655 119067950 119067737 Y NA NA NA NA NA NA AC093901.1 125693 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 119145172 119145468 119145321 Y NA NA NA NA NA NA AC093901.1 203210 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 121614859 121615272 121615044 Y NA NA NA NA NA NA GLI2 123660 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 125298610 125298776 125298693 Y NA NA NA NA NA NA YWHAZP2 2014963 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 128761594 128761964 128761779 Y NA SAP130 NA NA NA NA SAP130 21730 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 130201021 130201117 130201085 Y NA NA NA NA NA NA RAB6C 534118 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 136337488 136337852 136337670 Y NA NA NA NA NA NA R3HDM1 50463 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 139289140 139289372 139289256 Y NA AC097721.2,SPOPL NA NA NA NA SPOPL 31769 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 142874625 142874987 142874896 Y LRP1B LRP1B NA NA NA NA LRP1B 12283 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 149403654 149404182 149403820 Y NA EPC2 NA NA NA NA EPC2 3645 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 151377866 151378135 151377929 Y RND3 RND3 RND3,RBM43 IMR90 Hi-C 24141950 RND3 15390 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 154379200 154379581 154379374 Y NA NA NA NA NA NA AC012501.2 68220 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 154903292 154903466 154903385 Y NA NA NA NA NA NA GALNT13 176866 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 157330960 157331271 157331070 Y GPD2 GPD2 NA NA NA NA GPD2 41158 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 162095171 162095411 162095272 Y TBR1,SLC4A10 NA NA NA NA NA PSMD14 67138 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 162197345 162197490 162197464 Y NA PSMD14,AC009299.5 NA NA NA NA AC009299.5 1508 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 163376672 163376691 163376681 Y NA NA NA NA NA NA GCA 203322 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 165430240 165430431 165430256 Y NA GRB14 NA NA NA NA GRB14 45927 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 165508598 165508853 165508726 Y COBLL1 GRB14 GRB14 MCF7 ChIA-PET 22265404 GRB14 32240 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 165766653 165766876 165766835 Y SLC38A11,COBLL1 NA NA NA NA NA COBLL1 68464 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 166982475 166982914 166982672 Y SCN1A,SCN1A NA NA NA NA NA TTC21B 174122 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 172101085 172101413 172101325 Y NA TLK1 METTL8,TLK1 IMR90 Hi-C 24141950 TLK1 15261 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 173111540 173111762 173111691 Y ITGA6 NA ITGA6 IMR90 Hi-C 24141950 DLX2 145912 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 174800246 174800560 174800554 Y NA SP3 NA NA NA NA SP3 27870 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 177047108 177047317 177047213 Y NA AC009336.24,HOXD-AS1,AC016739.2 NA NA NA NA HOXD-AS1 4369 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 178104644 178105169 178104872 Y NFE2L2,NFE2L2,HNRNPA3 HNRNPA3,AC079305.8,MIR3128 NA NA NA NA MIR3128 13569 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 182258262 182258376 182258308 Y ITGA4 NA NA NA NA NA ITGA4 61553 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 183839050 183839414 183839395 Y NA NA NA NA NA NA NCKAP1 62172 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 186638782 186639016 186638929 Y NA NA NA NA NA NA ZC3H15 709867 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 187409105 187409391 187409239 Y ITGAV,ITGAV ITGAV ITGAV MCF7 ChIA-PET 22265404 ITGAV 43401 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 187601377 187601405 187601389 Y ZSWIM2,FAM171B FAM171B NA NA NA NA FAM171B 44679 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 188280188 188280462 188280371 Y NA CALCRL NA NA NA NA CALCRL 30725 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 191075616 191075973 191075872 Y NA NA NA NA NA NA INPP1 130223 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 196523919 196524096 196523991 Y SLC39A10 NA NA NA NA NA SLC39A10 85218 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 196617949 196618273 196617953 Y NA NA NA NA NA NA SLC39A10 179248 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 197078069 197078253 197078160 Y STK17B STK17B NA NA NA NA STK17B 38842 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 197934286 197934620 197934500 Y NA NA NA NA NA NA PGAP1 143766 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 198144443 198144693 198144592 Y NA ATP5G2P3 NA NA NA NA ATP5G2P3 18608 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 198328385 198328433 198328409 Y PLCL1 SF3B1,COQ10B,HSPE1,MOB4 NA NA NA NA COQ10B 12238 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 200800298 200800427 200800328 Y SATB2,SATB2,SATB2,TYW5,C2orf69 C2orf69,C2orf47,TYW5 NA NA NA NA C2orf47 17613 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 201172384 201172536 201172446 Y NA SPATS2L NA NA NA NA SPATS2L 3780 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 202802147 202802175 202802161 Y NA NA ALS2,CDK15,FZD7,NOP58 IMR90 Hi-C 24141950 FZD7 95135 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 202898182 202898685 202898353 Y TMEM237,FZD7 FZD7 NA NA NA NA FZD7 872 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 203159775 203160145 203159798 Y NA NOP58 NA NA NA NA NOP58 31336 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 203503987 203504299 203504102 Y NOP58,ALS2CR8,ALS2CR8,FAM117B FAM117B NA NA NA NA FAM117B 6086 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 204393119 204393487 204393303 Y NA RAPH1 NA NA NA NA RAPH1 4646 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 204499475 204499823 204499577 Y NA NA ABI2,RAPH1 IMR90 Hi-C 24141950 RAPH1 101342 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 204680113 204680267 204680190 Y NA NA RAPH1,NBEAL1,CYP20A1,ABI2 IMR90 Hi-C 24141950 RAPH1 281980 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 206564438 206564682 206564481 Y INO80D,NRP2 NRP2 NA NA NA NA NRP2 19724 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 206569997 206570271 206570078 Y NA NRP2 NA NA NA NA NRP2 25283 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 208395422 208395980 208395659 Y PLEKHM3,METTL21A,METTL21A,CREB1 CREB1 NA NA NA NA CREB1 2961 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 216948718 216948931 216948849 Y NA TMEM169,PECR,XRCC5 NA NA NA NA PECR 3040 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 217557565 217558269 217557956 Y NA NA NA NA NA NA IGFBP5 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 217797120 217797464 217797294 Y NA NA DIRC3,TNP1,IGFBP5 IMR90 Hi-C 24141950 IGFBP5 238872 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 219773515 219774011 219773826 Y USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A NA NA NA NA NA IHH 149178 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr2 222826690 222827411 222827014 Y NA NA EPHA4 IMR90 Hi-C 24141950 EPHA4 389768 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr2 223429708 223429962 223429836 Y FARSB NA NA NA NA NA FARSB 89094 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 224569350 224569680 224569515 Y NA NA AP1S3 IMR90 Hi-C 24141950 SCG2 104129 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 225720701 225721025 225720950 Y NA NA NA NA NA NA CUL3 272591 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 227110529 227110615 227110572 Y NA NA IRS1,RHBDD1 IMR90 Hi-C 24141950 IRS1 551860 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 227276579 227276895 227276743 Y NA NA NYAP2,IRS1 IMR90 Hi-C 24141950 IRS1 385580 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 227586845 227587105 227586929 Y NA NA NA NA NA NA IRS1 75370 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 227656309 227656561 227656437 Y NA IRS1,RHBDD1 NA NA NA NA IRS1 5914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 228253438 228253721 228253534 Y CCL20,AGFG1 NA TM4SF20,AGFG1 IMR90 Hi-C 24141950 MFF 65571 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 228331050 228331499 228331159 Y NA AGFG1 AGFG1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AGFG1 3369 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 230273717 230274042 230273951 Y PID1 NA NA NA NA NA PID1 139716 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 232032893 232033210 232033082 Y NA ARMC9 NA NA NA NA ARMC9 28050 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 232095962 232096104 232096033 Y NA ARMC9,AC018738.2 NA NA NA NA AC018738.2 22706 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 232229850 232230117 232229960 Y NA B3GNT7 NA NA NA NA B3GNT7 28137 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 232468888 232470128 232469532 Y DIS3L2,PTMA,NMUR1 NA NA NA NA NA LINC00471 91838 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 232840477 232840577 232840527 Y DIS3L2 DIS3L2 NA NA NA NA DIS3L2 16522 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 234357256 234357513 234357369 Y NA NA NA NA NA NA DGKD 96103 CAGE LC-1F hg19 FANTOM5 11.9536220168127 chr2 234465976 234466363 234466311 Y HJURP USP40 NA NA NA NA USP40 7065 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr2 234614877 234615153 234615015 Y NA UGT1A7,UGT1A6 NA NA NA NA UGT1A6 16624 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 234630754 234630813 234630784 Y NA UGT1A7,UGT1A6 NA NA NA NA UGT1A6 32501 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 236453392 236453640 236453439 Y NA NA NA NA NA NA AGAP1 52659 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 238832423 238832667 238832502 Y NA UBE2F NA NA NA NA UBE2F 40802 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 239593183 239593431 239593307 Y NA NA LOC151171 IMR90 Hi-C 24141950 ASB1 259800 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 240161951 240162602 240162296 Y HDAC4 NA NA NA NA NA HDAC4 158746 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 240196255 240196671 240196554 Y HDAC4 NA NA NA NA NA HDAC4 124677 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr2 240213505 240213689 240213606 Y NA NA NA NA NA NA HDAC4 107659 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 240678666 240678900 240678725 Y HDAC4 NA NA NA NA NA NDUFA10 283919 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 241366341 241366661 241366471 Y GPR35,GPC1 GPC1 NA NA NA NA GPC1 6427 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 241373489 241373922 241373594 Y GPC1 GPC1 NA NA NA NA GPC1 401 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr2 241845496 241845803 241845554 Y NA NA LOC200772,SNED1,MTERFD2 IMR90 Hi-C 24141950 KIF1A 87771 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 242455386 242455795 242455485 Y NEU4,C2orf85 STK25,BOK NA NA NA NA STK25 8241 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr2 242480531 242480899 242480752 Y NA STK25,BOK NA NA NA NA BOK 15237 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 641092 641461 641194 Y NA SRXN1 SRXN1 MCF7 ChIA-PET 22265404 SRXN1 9078 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 1878572 1879041 1878847 Y SIRPB2,SIRPB1,SIRPA,SIRPA,SIRPA SIRPA NA NA NA NA SIRPA 5418 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 2978820 2979208 2979015 Y NA MRPS26 NA NA NA NA MRPS26 45383 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 3155446 3155862 3155811 Y EBF4,PTPRA,C20orf194 FASTKD5,UBOX5,DDRGK1,ITPA NA NA NA NA UBOX5 16604 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 3200687 3201082 3200885 Y NA DDRGK1,ITPA,SLC4A11 NA NA NA NA ITPA 13173 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 10482481 10482747 10482670 Y NA NA NA NA NA NA MKKS 69611 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 10492212 10492484 10492413 Y NA NA NA NA NA NA MKKS 79342 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 13434936 13435260 13435184 Y NA NA NA NA NA NA TASP1 182327 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 17637776 17637930 17637851 Y BANF2 RRBP1 NA NA NA NA RRBP1 23010 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr20 18276093 18276447 18276109 Y CSRP2BP ZNF133 NA NA NA NA ZNF133 8972 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 19783112 19783320 19783290 Y NA RP1-122P22.2 RIN2,SLC24A3 IMR90 Hi-C 24141950 RP1-122P22.2 46760 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 19917216 19917720 19917223 Y NA NA NA NA NA NA NAA20 78040 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 25229395 25229593 25229494 Y NA PYGB NA NA NA NA PYGB 2690 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 29647996 29648434 29648295 Y DEFB121,DEFB116 FRG1B NA NA NA NA FRG1B 38139 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 30175524 30175854 30175562 Y NA ID1 NA NA NA NA ID1 15232 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 30182515 30183026 30182914 Y NA ID1 HM13 MCF7 ChIA-PET 22265404 ID1 8060 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 30191850 30192346 30192159 Y ID1 ID1 NA NA NA NA ID1 764 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 30301047 30301377 30301326 Y NA BCL2L1,TPX2 NA NA NA NA BCL2L1 8415 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 31044923 31045080 31044970 Y NA NA NA NA NA NA ASXL1 100768 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 31171182 31171312 31171248 Y DNMT3B,C20orf203 C20orf112 NA NA NA NA C20orf112 306 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 34303643 34304038 34303890 Y NA ROMO1,NFS1,RBM39 NA NA NA NA NFS1 18362 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 34652590 34653055 34652672 Y NA EPB41L1 LOC647979,PHF20,SCAND1,C20orf152,EPB41L1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EPB41L1 24371 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 35234952 35235695 35235080 Y NA TGIF2,C20orf24 NA NA NA NA C20orf24 2815 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr20 35362274 35362463 35362369 Y NA NDRG3,DSN1 NA NA NA NA NDRG3 10018 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 35490387 35490628 35490526 Y MANBAL,KIAA0889 NA KIAA0889 MCF7 ChIA-PET 22265404 SAMHD1 87618 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 36056702 36057072 36056829 Y NA RPL7AP14 NA NA NA NA RPL7AP14 14864 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 36831796 36832119 36831958 Y NA TGM2 NA NA NA NA TGM2 38816 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 37678805 37678873 37678867 Y SLC32A1,PPP1R16B NA NA NA NA NA DHX35 89863 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 39958158 39958419 39958360 Y NA ZHX3,LPIN3 PLCG1,ZHX3,LPIN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LPIN3 9141 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 40321359 40321668 40321514 Y NA NA CHD6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD6 76226 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 41800157 41800257 41800214 Y NA PTPRT NA NA NA NA PTPRT 16353 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 42286061 42286420 42286177 Y SRSF6,L3MBTL1,MYBL2 RPL27AP,MYBL2 MYBL2 IMR90 Hi-C 24141950 RPL27AP 6898 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 42718699 42718853 42718776 Y NA NA NA NA NA NA TOX2 177195 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 43569969 43570092 43570031 Y RBPJL,TP53TG5,STK4 PABPC1L,TOMM34,STK4 NA NA NA NA TOMM34 17035 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 45989347 45989834 45989660 Y SULF2 RP4-569M23.2,ZMYND8 ZMYND8,LOC100131496,NCOA3 IMR90 Hi-C 24141950 ZMYND8 5780 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 46021549 46021674 46021604 Y NA RP4-569M23.2,ZMYND8 ZMYND8,LOC100131496,SLC2A10,EYA2,NCOA3,PARD6B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 37982 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 46420724 46421103 46420967 Y NA SULF2 SULF2,PREX1,ARFGEF2 IMR90 Hi-C 24141950 SULF2 7364 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 47544338 47544681 47544534 Y DDX27 ARFGEF2 NA NA NA NA ARFGEF2 7911 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 47750965 47751079 47750977 Y ZNFX1 NA NA NA NA NA STAU1 51825 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 48065517 48065771 48065626 Y NA KCNB1 NA NA NA NA KCNB1 31413 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 48383666 48383949 48383788 Y ZNFX1,B4GALT5,SNAI1,RNF114,CEBPB,SLC9A8 SNRPFP1,SLC9A8 B4GALT5,SLC9A8,KCNB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SNRPFP1 39287 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 48533898 48534043 48533948 Y B4GALT5,SLC9A8,CEBPB,SPATA2,SNAI1,RNF114 SPATA2,RNF114 NA NA NA NA SPATA2 3818 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 48598723 48598794 48598730 Y B4GALT5,SLC9A8,TMEM189,CEBPB,RNF114,SNAI1 RNF114,SNAI1 NA NA NA NA SNAI1 1187 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 48763277 48763795 48763638 Y B4GALT5,SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB UBE2V1,TMEM189-UBE2V1,TMEM189,CEBPB NA NA NA NA TMEM189-UBE2V1 4379 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 48863549 48863594 48863572 Y NA NA PTPN1,MIR645,CEBPB,FAM65C,LOC284751,PARD6B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CEBPB 58173 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 48924890 48925591 48925260 Y SLC9A8,RNF114,SNAI1,TMEM189,CEBPB,PTPN1 NA NA NA NA NA CEBPB 119514 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 48951795 48951969 48951898 Y NA NA NA NA NA NA CEBPB 146419 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr20 49838536 49838841 49838768 Y NA NA KCNG1 IMR90 Hi-C 24141950 KCNG1 200870 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 51648602 51648709 51648656 Y NA NA NA NA NA NA TSHZ2 61656 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 52195908 52196455 52196142 Y ZNF217 ZNF217 NA NA NA NA ZNF217 27991 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 52239995 52240318 52240062 Y ZNF217 ZNF217 SUMO1P1,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 15549 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr20 52374184 52374569 52374228 Y ZNF217 NA ZNF217,BCAS1,SUMO1P1 IMR90 Hi-C 24141950 ZNF217 149738 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 52392953 52393088 52393021 Y NA NA ZNF217,BCAS1,SUMO1P1 IMR90 Hi-C 24141950 ZNF217 168507 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 52543055 52543571 52543250 Y ZNF217 NA NA NA NA NA PFDN4 278815 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 52550838 52551665 52551067 Y ZNF217 NA NA NA NA NA PFDN4 270721 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 55379556 55380011 55379738 Y TFAP2C NA TFAP2C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TFAP2C 177198 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 55964119 55964506 55964297 Y ZBP1,MTRNR2L3,RBM38 RAE1 NA NA NA NA RBM38 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 55976268 55976716 55976350 Y RBM38,ZBP1,PMEPA1 RBM38 NA NA NA NA RBM38 11805 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 57018014 57018479 57018179 Y STX16 NA NA NA NA NA VAPB 55836 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 57032377 57032636 57032571 Y NA NA NA NA NA NA VAPB 70199 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 58552421 58552506 58552458 Y PHACTR3,PHACTR3,PHACTR3 PPP1R3D NA NA NA NA PPP1R3D 39069 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 60719468 60719634 60719593 Y SS18L1,GTPBP5 LSM14B,PSMA7,SS18L1 NA NA NA NA SS18L1 2646 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 61425509 61425950 61425706 Y DPH3P1,DIDO1,OGFR OGFR NA NA NA NA OGFR 8237 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 61514139 61514234 61514187 Y NA TCFL5 NA NA NA NA TCFL5 23024 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 62478016 62478296 62478069 Y NA ZBTB46,TPD52L2,DNAJC5 NA NA NA NA TPD52L2 16300 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr20 62494990 62495823 62495679 Y NA ZBTB46,TPD52L2,DNAJC5,RNU1-134P NA NA NA NA TPD52L2 394 CAGE LC-1F hg19 FANTOM5 8.09761491461506 chr20 62739506 62739724 62739570 Y NA NA NA NA NA NA TCEA2 60317 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 17924273 17924626 17924451 Y NA NA NA NA NA NA USP25 823929 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 26962945 26963646 26963455 Y NA MRPL39 NA NA NA NA MRPL39 14183 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 30274097 30274402 30274148 Y NA N6AMT1 NA NA NA NA N6AMT1 18404 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 30374865 30375265 30375125 Y C21orf7,N6AMT1,LTN1,USP16 LTN1,RPL23P2,RWDD2B,USP16 LTN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL23P2 6511 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 31066887 31067008 31066948 Y NA NA NA NA NA NA BACH1 502495 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 32265922 32266021 32265970 Y KRTAP13-4,KRTAP15-1,KRTAP19-4,KRTAP6-3,KRTAP21-3 NA NA NA NA NA SOD1 763914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 33301390 33301573 33301482 Y NA NA NA NA NA NA SCAF4 199002 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 34451403 34451550 34451500 Y SON,IL10RB,IFNGR2,IFNAR1,GART,GART,SYNJ1,SYNJ1,IFNAR2,OLIG2,OLIG1 OLIG1 NA NA NA NA OLIG1 10953 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 35319562 35320491 35320153 Y NA ATP5O NA NA NA NA ATP5O 33278 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 36220749 36221095 36220890 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA SLC5A3 776879 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 37712607 37712952 37712729 Y NA MORC3,CHAF1B NA NA NA NA MORC3 22120 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr21 38500086 38500176 38500125 Y NA NA NA NA NA NA TTC3 56560 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 38935728 38936411 38936235 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 199636 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr21 39237518 39237709 39237636 Y DYRK1A,KCNJ15 NA NA NA NA NA DYRK1A 501426 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 40673787 40673929 40673891 Y NA BRWD1,HMGN1 NA NA NA NA BRWD1 17556 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 41524041 41524191 41524116 Y NA NA NA NA NA NA SH3BGR 708260 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 46737459 46737695 46737585 Y COL18A1 POFUT2 COL18A1 MCF7 ChIA-PET 22265404 POFUT2 31646 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 46836537 46836812 46836569 Y NA COL18A1 NA NA NA NA COL18A1 13485 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr21 47010467 47010705 47010586 Y NA SLC19A1,AL133493.2 PCBP3,LOC100129027,SLC19A1,COL18A1,POFUT2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AL133493.2 863 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr22 18404666 18404945 18404902 Y NA NA NA NA NA NA MICAL3 100380 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 18506386 18506784 18506419 Y MICAL3 MICAL3 NA NA NA NA MICAL3 1061 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 19159081 19159242 19159165 Y NA DGCR14,SLC25A1 NA NA NA NA SLC25A1 5101 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr22 19378121 19378382 19378253 Y NA MRPL40 NA NA NA NA MRPL40 39043 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 20287043 20287283 20287165 Y NA XXbac-B444P24.10,DGCR6L NA NA NA NA XXbac-B444P24.10 1760 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 22011632 22012115 22011859 Y NA YDJC,SDF2L1,PPIL2 NA NA NA NA PPIL2 7073 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 22334723 22335115 22334952 Y NA PPM1F,TOP3B NA NA NA NA TOP3B 98 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr22 22478098 22478432 22478244 Y CCDC116,YPEL1,ZNF280B NA NA NA NA NA TOP3B 142885 CAGE LC-1F hg19 FANTOM5 13.4960248576918 chr22 23863943 23864332 23864232 Y GNAZ,RTDR1,BCR NA ZDHHC8P1 IMR90 Hi-C 24141950 ZDHHC8P1 121030 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 25587613 25587664 25587639 Y NA NA NA NA NA NA LRP5L 211680 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 27131212 27131584 27131334 Y NA NA MN1,PITPNB,MIAT IMR90 Hi-C 24141950 CTA-211A9.5 64482 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 28065247 28065726 28065530 Y PITPNB,MN1 NA MIAT,MN1 IMR90 Hi-C 24141950 MN1 129760 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 28304832 28305219 28305193 Y NA TTC28-AS1,PITPNB NA NA NA NA TTC28-AS1 8145 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 29365910 29365950 29365937 Y NA NA NA NA NA NA ZNRF3 88330 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 30591785 30593544 30592394 Y NA LIF NA NA NA NA LIF 47296 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 35767811 35768194 35767985 Y APOL6,TOM1,TOM1,HMOX1 HMOX1,MCM5 NA NA NA NA HMOX1 6160 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr22 36343697 36344006 36343862 Y NA NA NA NA NA NA RBFOX2 78467 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 36806147 36806450 36806256 Y NA MYH9 MYH9,FOXRED2,TXN2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYH9 24084 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 39253318 39253463 39253391 Y KCNJ4,LOC646851 NPTXR,CBX6 NA NA NA NA CBX6 12856 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 40589903 40590338 40589971 Y NA NA NA NA NA NA RPL7P52 88833 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 41047729 41047883 41047796 Y NA MKL1,GAPDHP37 ST13,MKL1,MCHR1,ADSL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 17023 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 41048065 41048352 41048232 Y EP300,MKL1 MKL1,GAPDHP37 ST13,MKL1,MCHR1,ADSL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 17359 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 41418482 41418837 41418726 Y MKL1,EP300 RP11-12M9.3 ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-12M9.3 39219 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 41776948 41777130 41776981 Y NA TEF NA NA NA NA TEF 15611 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 41809427 41810696 41809981 Y CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF TEF,TOB2 NA NA NA NA TOB2 30331 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr22 42063539 42063782 42063553 Y NA XRCC6,C22orf46,NHP2L1 NA NA NA NA C22orf46 19161 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 42345988 42346366 42346055 Y NA CENPM,SEPT3,WBP2NL NA NA NA NA CENPM 4820 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 44541394 44541995 44541679 Y NA NA NA NA NA NA PARVB 148303 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 45553376 45553664 45553597 Y NA NUP50 NA NA NA NA NUP50 4058 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 45944996 45945587 45945178 Y NA FBLN1 NA NA NA NA FBLN1 48878 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 46041491 46041960 46041628 Y NA ATXN10 ATXN10,WNT7B,FAM118A,SMC1B,FBLN1,LOC730668,LOC100271722,MIRLET7BHG IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATXN10 23718 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr22 46374858 46375446 46375153 Y NA WNT7B NA NA NA NA WNT7B 3849 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 46467914 46468476 46468052 Y NA RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763 NA NA NA NA RP6-109B7.4 4143 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 46474643 46475112 46474791 Y C22orf26 RP6-109B7.3,C22orf26,RP6-109B7.4,MIR4763 NA NA NA NA RP6-109B7.4 10872 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 46957537 46957704 46957620 Y NA CELSR1,GRAMD4 TRMU,CELSR1,GRAMD4 IMR90 Hi-C 24141950 GRAMD4 12205 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr22 46982383 46982526 46982455 Y NA GRAMD4 TRMU,GRAMD4 IMR90 Hi-C 24141950 GRAMD4 12474 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 47338470 47338938 47338889 Y CERK,TBC1D22A NA NA NA NA NA TBC1D22A 181952 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 47525665 47525872 47525801 Y NA NA NA NA NA NA TBC1D22A 369147 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 48146543 48146838 48146641 Y NA NA NA NA NA NA RP11-191L9.4 121120 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 49860945 49861166 49860973 Y NA NA NA NA NA NA BRD1 357994 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 50105800 50106184 50105992 Y NA NA NA NA NA NA BRD1 112976 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr22 50344780 50345228 50344944 Y NA CRELD2,ALG12,PIM3 PLXNB2 MCF7 ChIA-PET 22265404 PIM3 6933 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 50364350 50364715 50364589 Y NA PIM3 NA NA NA NA PIM3 12189 CAGE LC-1F hg19 FANTOM5 5.01280923285694 chr22 50608010 50608409 50608105 Y MLC1,MOV10L1,MAPK8IP2,MAPK8IP2,FAM116B,SELO,PANX2 PANX2,TRABD,SELO NA NA NA NA PANX2 850 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr22 50609711 50610057 50610042 Y NA PANX2,TRABD,SELO NA NA NA NA PANX2 2551 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 3639816 3640081 3639965 Y NA NA NA NA NA NA CRBN 420422 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 5028057 5028369 5028268 Y EDEM1,ARL8B,BHLHE40 BHLHE40 NA NA NA NA BHLHE40 9256 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 8754319 8754664 8754531 Y NA NA NA NA NA NA RAD18 248793 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 12059896 12060069 12059983 Y VGLL4 NA NA NA NA NA TAMM41 173503 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 12142843 12142936 12142890 Y NA NA NA NA NA NA TAMM41 256450 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 12369841 12370512 12370195 Y PPARG,PPARG,PPARG NA NA NA NA NA TSEN2 153419 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 13035460 13035932 13035883 Y CAND2,IQSEC1,HDAC11,HDAC11,IQSEC1 NA NA NA NA NA IQSEC1 76685 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 13493281 13493606 13493395 Y NA NUP210,HDAC11 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HDAC11 25618 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 14444961 14445761 14445267 Y C3orf19,SLC6A6 SLC6A6 NA NA NA NA SLC6A6 2885 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 15599049 15599493 15599306 Y ANKRD28,SH3BP5,METTL6,EAF1,COLQ BTD,HACL1 NA NA NA NA BTD 41355 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 15780032 15780074 15780052 Y SH3BP5,EAF1 NA BTD IMR90 Hi-C 24141950 HACL1 138694 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 16379697 16380223 16379925 Y DPH3 NA NA NA NA NA OXNAD1 74991 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 17506581 17506846 17506713 Y TBC1D5 NA NA NA NA NA TBC1D5 977463 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 18580242 18580387 18580280 Y NA RAD23BP1 NA NA NA NA RAD23BP1 2077 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 19188369 19188866 19188531 Y NA KCNH8 NA NA NA NA KCNH8 423 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 20205868 20206079 20206039 Y SGOL1,SGOL1 SGOL1 NA NA NA NA SGOL1 19705 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 23935594 23935945 23935770 Y NA RPL15,NR1D2 NA NA NA NA RPL15 20091 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 25790563 25790933 25790768 Y NA OXSM,NGLY1 NA NA NA NA OXSM 31475 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 25796078 25796406 25796226 Y NGLY1 OXSM,NGLY1 NA NA NA NA OXSM 26002 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 27674607 27674970 27674793 Y NA AC098614.2 SLC4A7,NEK10 IMR90 Hi-C 24141950 AC098614.2 2140 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr3 27719100 27719312 27719216 Y NA AC098614.2,EOMES NEK10,SLC4A7 IMR90 Hi-C 24141950 EOMES 42894 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 33436260 33436332 33436276 Y CLASP2,FBXL2,FBXL2 UBP1 NA NA NA NA UBP1 44531 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 36937540 36937792 36937666 Y NA NA NA NA NA NA EPM2AIP1 95003 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr3 37901883 37902306 37902042 Y CTDSPL CTDSPL NA NA NA NA CTDSPL 432 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 38209266 38209592 38209336 Y VILL,PLCD1,SLC22A14,ACAA1,MYD88,OXSR1 ACAA1,MYD88,OXSR1 NA NA NA NA OXSR1 4686 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 42220925 42221235 42221114 Y TRAK1 RNU4-78P NA NA NA NA RNU4-78P 40097 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 44040259 44040834 44040651 Y NA NA ANO10 IMR90 Hi-C 24141950 ANO10 309173 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr3 44621262 44622718 44622436 Y NA ZNF197 NA NA NA NA ZNF197 1662 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 45594952 45595331 45595047 Y LIMD1 LIMD1 NA NA NA NA LIMD1 66 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 45688648 45689066 45688756 Y LIMD1 SACM1L SACM1L,LOC644714 IMR90 Hi-C 24141950 SACM1L 39482 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 47898226 47898293 47898260 Y NA NA NA NA NA NA DHX30 55827 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 47991974 47992099 47992083 Y CCDC51,ATRIP,SMARCC1,CDC25A NA NA NA NA NA MAP4 136670 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr3 48128782 48129302 48129029 Y NA MAP4 NA NA NA NA MAP4 13 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 50194710 50194859 50194796 Y TUSC2,HYAL2,GMPPB,C3orf54,MST1R,MON1A,IFRD2,SEMA3F SEMA3F NA NA NA NA SEMA3F 4232 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 52091161 52091675 52091445 Y TWF2,DUSP7 DUSP7 NA NA NA NA DUSP7 2595 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 52334165 52334539 52334405 Y NA GLYCTK,WDR82 NA NA NA NA WDR82 14129 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 52652258 52652629 52652403 Y GLYCTK,MUSTN1,GLT8D1 NA NA NA NA NA GNL3 60543 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 53272912 53273168 53273085 Y TMEM110,PRKCD,DCP1A TKT NA NA NA NA TKT 14900 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 53286308 53286764 53286678 Y NA TKT NA NA NA NA TKT 1304 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 53288705 53289353 53289077 Y NA TKT NA NA NA NA TKT 637 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 54675181 54675533 54675345 Y NA RPS15P5 NA NA NA NA RPS15P5 16939 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 54856337 54856720 54856396 Y NA NA NA NA NA NA RPS15P5 198095 CAGE LC-1F hg19 FANTOM5 4.24160781241741 chr3 55364571 55364745 55364625 Y NA NA CACNA2D3,WNT5A,ERC2,C3orf51 IMR90 Hi-C 24141950 RP11-875H7.5 172544 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 55511418 55511654 55511489 Y WNT5A RP11-875H7.5 NA NA NA NA RP11-875H7.5 25635 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 59316034 59316229 59316222 Y NA NA NA NA NA NA C3orf67 282224 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 66549724 66550124 66549864 Y NA LRIG1 NA NA NA NA LRIG1 37 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 69549148 69549545 69549320 Y NA FRMD4B NA NA NA NA FRMD4B 40189 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 71267437 71267786 71267612 Y NA NA NA NA NA NA FOXP1 363354 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 73697614 73697785 73697708 Y NA NA NA NA NA NA CCDC75P1 467172 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 78881449 78881566 78881507 Y NA NA NA NA NA NA ROBO1 933399 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 87101402 87101690 87101545 Y NA NA NA NA NA NA CHMP2B 172731 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 88255753 88255858 88255769 Y HTR1F NA NA NA NA NA CGGBP1 58718 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 96336052 96336669 96336607 Y NA NA NA NA NA NA EPHA6 194756 CAGE LC-1F hg19 FANTOM5 5.01280923285694 chr3 96786728 96787034 96786881 Y NA NA NA NA NA NA EPHA6 255303 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 99646991 99647087 99647049 Y NA NA NA NA NA NA TBC1D23 330757 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 100054250 100054545 100054496 Y NA NIT2 NA NA NA NA NIT2 2705 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 101403455 101403770 101403678 Y SENP7,RG9MTD1,PCNP,NFKBIZ,ZBTB11,RPL24 ZBTB11,CEP97 NA NA NA NA RPL24 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 101444542 101444901 101444615 Y FAM55C,FAM55C,CEP97 RPL24,CEP97 NA NA NA NA CEP97 3773 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 101637736 101637924 101637829 Y FAM55C NA NA NA NA NA NFKBIZ 92901 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 105087492 105087848 105087688 Y NA ALCAM NA NA NA NA ALCAM 3739 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 107085712 107085944 107085942 Y NA NA LOC344595,LOC100302640 IMR90 Hi-C 24141950 LINC00883 128173 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 107708606 107708760 107708699 Y CD47 NA MYH15,CD47,LOC285205,IFT57,HHLA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD47 99112 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 107841863 107841996 107841935 Y NA CD47 CD47,IFT57,MYH15 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD47 33991 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 111420857 111420932 111420895 Y NA PLCXD2,PHLDB2 PHLDB2,CD96,ABHD10 IMR90 Hi-C 24141950 PHLDB2 28412 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 111454124 111454225 111454190 Y C3orf52,PHLDB2 PHLDB2 NA NA NA NA PHLDB2 4780 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 111484180 111484533 111484208 Y NA PHLDB2 NA NA NA NA PHLDB2 34836 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 111623667 111623869 111623803 Y NA NA NA NA NA NA ABHD10 71988 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 112258715 112258936 112258847 Y SLC35A5,ATG3 SLC35A5,ATG3 NA NA NA NA SLC35A5 19620 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 115941110 115941531 115941311 Y NA NA NA NA NA NA PTMAP8 802014 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 117197952 117198262 117198108 Y NA NA NA NA NA NA PTMAP8 454407 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 119146429 119146829 119146680 Y ARHGAP31,CD80,ADPRH TMEM39A,POGLUT1 NA NA NA NA TMEM39A 38848 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 119238487 119238668 119238501 Y NA TIMMDC1 NA NA NA NA TIMMDC1 23108 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 119644387 119644860 119644721 Y NA NA NA NA NA NA GSK3B 166404 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 121149194 121149225 121149210 Y NA NA NA NA NA NA RPL7AP11 61732 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 121550824 121551193 121550988 Y NA IQCB1,EAF2 NA NA NA NA IQCB1 733 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 121638049 121638246 121638101 Y CSTA,ILDR1 NA NA NA NA NA EAF2 86019 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr3 121722572 121722987 121722953 Y NA ILDR1 NA NA NA NA ILDR1 16064 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 124779995 124780351 124780112 Y ITGB5,HEG1 HEG1 NA NA NA NA HEG1 7193 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 125709142 125709481 125709414 Y ZXDC,CCDC37 NA NA NA NA NA FAM86JP 75679 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr3 126126680 126126867 126126779 Y NA NA NA NA NA NA ZXDC 65895 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 126680194 126680270 126680232 Y NA PLXNA1 NA NA NA NA PLXNA1 25167 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 128336521 128336831 128336572 Y DNAJB8 NA NA NA NA NA RPN1 61087 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 128475272 128475670 128475352 Y RAB7A,ISY1,CNBP RAB7A,FTH1P4 NA NA NA NA FTH1P4 6191 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 128745839 128746109 128746044 Y NA NA NA NA NA NA RAB43 93535 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 130637982 130638444 130638066 Y NA NA NA NA NA NA ATP2C1 70543 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 131961835 131962144 131961940 Y UBA5 RPL7P16,CPNE4 CPNE4 IMR90 Hi-C 24141950 RPL7P16 726 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 133537876 133537890 133537883 Y NA SRPRB NA NA NA NA SRPRB 36999 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 134100770 134101008 134100801 Y NA AMOTL2 AMOTL2,MIR4788,ANAPC13,CEP63 IMR90 Hi-C 24141950 AMOTL2 8449 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 136067042 136067151 136067097 Y NA NA NA NA NA NA PCCB 99894 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 136327517 136327655 136327647 Y NA NA NA NA NA NA STAG1 141565 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 136631651 136631818 136631718 Y NA NA NA NA NA NA NCK1 52601 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 138582294 138582582 138582441 Y MRPS22 PIK3CB PIK3CB IMR90 Hi-C 24141950 PIK3CB 30514 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr3 141482175 141482451 141482314 Y NA RNF7 NA NA NA NA RNF7 27129 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 141610914 141611173 141610928 Y NA ATP1B3 NA NA NA NA ATP1B3 17948 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 141659994 141660128 141660061 Y NA NA NA NA NA NA ATP1B3 67028 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 142723898 142724007 142723903 Y NA U2SURP NA NA NA NA U2SURP 42559 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 149151278 149151442 149151363 Y NA NA GYG1,TM4SF18,TM4SF1,WWTR1,WWTR1-AS1 IMR90 Hi-C 24141950 TM4SF1 57626 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 149665014 149665210 149665089 Y NA ANKUB1 NA NA NA NA ANKUB1 18962 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr3 150329194 150329427 150329421 Y NA SELT,SERP1 NA NA NA NA SERP1 10179 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 150987276 150987626 150987385 Y P2RY12,MED12L GPR87 NA NA NA NA GPR87 45114 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 151971438 151971777 151971516 Y NA MBNL1,MBNL1-AS1 NA NA NA NA MBNL1 11821 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 152856443 152856813 152856615 Y RAP2B RAP2B RAP2B MCF7 ChIA-PET 22265404 RAP2B 21216 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 156206621 156206945 156206715 Y NA NA NA NA NA NA SSR3 64028 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 156527707 156527883 156527795 Y NA PA2G4P4,LINC00886,LEKR1 NA NA NA NA PA2G4P4 1186 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 157935893 157935900 157935896 Y NA NA NA NA NA NA SHOX2 113601 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 158461822 158462112 158461908 Y NA MFSD1 RARRES1 MCF7 ChIA-PET 22265404 MFSD1 13835 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 159647586 159647883 159647684 Y NA NA IQCJ-SCHIP1,IL12A,IFT80,SMC4 IMR90 Hi-C 24141950 SCHIP1 91936 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 159765726 159765787 159765757 Y NA NA IQCJ-SCHIP1 IMR90 Hi-C 24141950 SCHIP1 210076 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 167174215 167174493 167174354 Y SERPINI1,SERPINI1 NA NA NA NA NA PDCD10 276234 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 168136003 168136042 168136023 Y NA NA NA NA NA NA EGFEM1P 170693 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 168939202 168939471 168939359 Y NA NA NA NA NA NA MECOM 439935 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 169299138 169299197 169299168 Y NA NA NA NA NA NA MECOM 80209 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 169300300 169300658 169300540 Y NA NA NA NA NA NA MECOM 78748 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 169379063 169379412 169379208 Y MECOM NA NA NA NA NA MECOM 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 169379831 169380308 169379976 Y NA MECOM NA NA NA NA MECOM 425 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 169482089 169482431 169482154 Y NA TERC,MYNN NA NA NA NA TERC 1241 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 170446657 170446914 170446737 Y NA NA CLDN11,SLC7A14,SKIL,PRKCI IMR90 Hi-C 24141950 RPL22L1 139358 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 171522372 171522650 171522540 Y TNIK,PLD1 PLD1 NA NA NA NA PLD1 4090 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 171820468 171820770 171820540 Y NA NA NA NA NA NA FNDC3B 65050 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 171826024 171826613 171826515 Y FNDC3B NA NA NA NA NA FNDC3B 70606 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 173650294 173650720 173650491 Y NA NA NA NA NA NA RP11-393N4.2 442314 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 174157357 174157932 174157609 Y NA NAALADL2 NAALADL2 IMR90 Hi-C 24141950 NAALADL2 2994 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 177038616 177038888 177038742 Y NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 125355 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 177075253 177075542 177075439 Y NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 161992 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 177077500 177078084 177077832 Y NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 164239 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 178532692 178532946 178532777 Y NA NA NA NA NA NA ZMAT3 255121 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 181437056 181437346 181437302 Y SOX2 SOX2 NA NA NA NA SOX2 9342 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 181442269 181442851 181442522 Y NA SOX2 NA NA NA NA SOX2 14555 CAGE LC-1F hg19 FANTOM5 6.94081278395577 chr3 181444404 181445128 181444694 Y NA SOX2 NA NA NA NA SOX2 16690 CAGE LC-1F hg19 FANTOM5 11.1824205963732 chr3 181500507 181500584 181500556 Y NA NA NA NA NA NA SOX2 72793 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 182645862 182646115 182645990 Y MCF2L2,MCCC1 NA NA NA NA NA DCUN1D1 55626 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 182825824 182825958 182825903 Y NA MCCC1 NA NA NA NA MCCC1 5905 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 183003579 183004143 183003750 Y ATP11B,B3GNT5,KLHL6,KLHL24 B3GNT5 NA NA NA NA B3GNT5 34547 CAGE LC-1F hg19 FANTOM5 4.24160781241741 chr3 183242331 183242579 183242455 Y B3GNT5,KLHL6,KLHL24 NA NA NA NA NA KLHL24 108777 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 184078263 184078665 184078465 Y NA EIF4G1,FAM131A,CLCN2,POLR2H NA NA NA NA POLR2H 757 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 184458237 184458578 184458314 Y NA MAGEF1 VPS8,EPHB3,POLR2H,CLCN2,FAM131A,EIF4G1,THPO,CHRD,MAGEF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAGEF1 30401 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 185215412 185215562 185215482 Y NA TMEM41A NA NA NA NA TMEM41A 567 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 185450719 185450896 185450815 Y NA C3orf65 NA NA NA NA C3orf65 22403 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 185903604 185903898 185903751 Y NA NA NA NA NA NA ETV5 77497 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 186746012 186746360 186746185 Y RTP1,ST6GAL1 NA NA NA NA NA ST6GAL1 99738 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 187464496 187464942 187464863 Y NA BCL6 NA NA NA NA BCL6 2981 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 187980692 187981197 187980748 Y NA NA NA NA NA NA LPP-AS2 110847 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 188057374 188057458 188057417 Y NA NA NA NA NA NA LPP-AS2 187529 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 188224984 188225450 188225214 Y NA NA NA NA NA NA LPP-AS2 355139 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 188324508 188324886 188324659 Y NA NA NA NA NA NA TPRG1 338117 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 188572527 188572842 188572731 Y NA NA NA NA NA NA TPRG1 90161 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr3 189022377 189022942 189022424 Y NA NA NA NA NA NA TP63 324263 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 189111445 189111690 189111608 Y TP63 NA NA NA NA NA TP63 235515 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 189508534 189508810 189508672 Y TP63 NA NA NA NA NA TP63 161329 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 189524070 189524362 189524216 Y NA NA NA NA NA NA TP63 176865 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 189559377 189559697 189559485 Y CLDN1,TP63 NA NA NA NA NA TP63 212172 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 189569925 189569928 189569927 Y TP63 NA NA NA NA NA TP63 222720 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr3 189632708 189632930 189632825 Y TP63 NA NA NA NA NA TP63 285503 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 192369931 192370325 192369972 Y NA NA NA NA NA NA MB21D2 263625 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 193548514 193548983 193548724 Y NA NA LOC100131551,LOC647323,HES1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OPA1 239581 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 193851636 193853009 193852912 Y ATP13A3,HES1 NA NA NA NA NA HES1 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 193858651 193858843 193858731 Y NA HES1 NA NA NA NA HES1 6717 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 193859199 193859624 193859359 Y TMEM44 HES1 NA NA NA NA HES1 7265 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 193876735 193877026 193876899 Y NA HES1 NA NA NA NA HES1 24801 CAGE LC-1F hg19 FANTOM5 5.78401065329647 chr3 194298758 194299295 194298977 Y NA TMEM44-AS1 ATP13A3,FLJ34208 IMR90 Hi-C 24141950 TMEM44-AS1 3445 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 194706106 194706403 194706255 Y NA NA LOC100507391,XXYLT1,LSG1,PPP1R2,FAM43A,ACAP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 XXYLT1 283493 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 194820742 194820949 194820800 Y PPP1R2,ACAP2 NA NA NA NA NA XXYLT1 168947 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 195153778 195154174 195153996 Y NA ACAP2 NA NA NA NA ACAP2 7633 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 195854063 195854320 195854202 Y TFRC,TFRC TFRC LOC401109,PCYT1A,TFRC,MIR570,MUC20,UBXN7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TFRC 47003 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr3 195897824 195897955 195897893 Y UBXN7,RNF168,LRRC33,TNK2,TM4SF19,PCYT1A NA NA NA NA NA TFRC 90764 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 196064212 196064579 196064504 Y WDR53,ZDHHC19 TCTEX1D2 NA NA NA NA TCTEX1D2 21042 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 196071529 196071904 196071800 Y UBXN7,RNF168,LRRC33,PCYT1A,TM4SF19 TCTEX1D2 TM4SF19-TCTEX1D2 IMR90 Hi-C 24141950 TCTEX1D2 28359 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 196105226 196105537 196105382 Y PCYT1A NA NA NA NA NA UBXN7 51808 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 196208308 196208582 196208445 Y NA RNF168 NA NA NA NA RNF168 20057 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 196244998 196245175 196245085 Y NA RNF168,FBXO45,WDR53 NA NA NA NA RNF168 16359 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr3 196255741 196255873 196255820 Y NA RNF168,FBXO45,WDR53 UBXN7,MUC20,RNF168,C3orf43,PCYT1A,TM4SF19-TCTEX1D2,WDR53,FBXO45,CEP19 IMR90 Hi-C 24141950 RNF168 27102 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr3 197007663 197007913 197007866 Y NA DLG1 NA NA NA NA DLG1 16258 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr3 197301708 197302062 197301885 Y NA BDH1 NA NA NA NA BDH1 3514 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 1031634 1031760 1031690 Y NA FGFRL1 NA NA NA NA FGFRL1 29910 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 1305077 1305367 1305246 Y DGKQ,KIAA1530 MAEA KIAA1530 IMR90 Hi-C 24141950 MAEA 23438 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 1865990 1866293 1866178 Y NA LETM1,WHSC1 LETM1,WHSC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WHSC1 4858 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 2537711 2538436 2538089 Y NA NA NA NA NA NA RNF4 75764 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 3468694 3469098 3468894 Y NA NA NA NA NA NA LRPAP1 63188 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 6278017 6278414 6278100 Y PPP2R2C,CRMP1,JAKMIP1 WFS1 NA NA NA NA WFS1 8441 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 6785099 6785509 6785391 Y TBC1D14,TBC1D14,TADA2B,KIAA0232 KIAA0232 NA NA NA NA KIAA0232 3997 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 8617311 8617700 8617508 Y NA NA NA NA NA NA ACOX3 176861 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 9154755 9155069 9154900 Y NA FAM86KP NA NA NA NA FAM86KP 1733 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 10830954 10831154 10831060 Y NA NA NA NA NA NA ZNF518B 373920 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 11490984 11491223 11491155 Y NA NA CLNK IMR90 Hi-C 24141950 HS3ST1 61595 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 12642016 12642195 12642111 Y NA NA NA NA NA NA HSP90AB2P 690843 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr4 13623241 13623510 13623376 Y NA NA NA NA NA NA RAB28 139252 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 21345990 21346140 21346137 Y NA NA NA NA NA NA PACRGL 650085 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 22270180 22270523 22270471 Y NA NA LOC100505912 IMR90 Hi-C 24141950 GPR125 245154 CAGE LC-1F hg19 FANTOM5 5.01280923285694 chr4 26338276 26338542 26338322 Y NA NA NA NA NA NA RBPJ 175199 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 38859134 38859762 38859410 Y KLF3,KLHL5,TLR1,TLR6 TLR1,TLR6,FAM114A1 NA NA NA NA TLR1,TLR6 2696 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr4 38870386 38870769 38870503 Y FAM114A1 TLR1,TLR6,FAM114A1 NA NA NA NA FAM114A1 3088 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 40056293 40056591 40056356 Y NA NA NA NA NA NA N4BP2 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 41936193 41936441 41936268 Y TMEM33 TMEM33 NA NA NA NA TMEM33 1056 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 54886131 54886730 54886449 Y GSX2 CHIC2 NA NA NA NA CHIC2 42127 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 54906868 54907157 54907139 Y NA CHIC2 NA NA NA NA CHIC2 21700 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 74974850 74975280 74974976 Y IL8,CXCL3,CXCL2,EREG,MTHFD2L CXCL2,MTHFD2L RASSF6 IMR90 Hi-C 24141950 MTHFD2L 2611 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 75070819 75070991 75070879 Y IL8,CXCL3,CXCL2,EREG,MTHFD2L NA NA NA NA NA MTHFD2L 92928 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 77869398 77869850 77869619 Y SEPT11 SEPT11 NA NA NA NA SEPT11 542 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 83912303 83912539 83912423 Y NA LIN54,COPS4 NA NA NA NA LIN54 19540 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 84469544 84469879 84469660 Y PLAC8,COQ2,HPSE,HPSE,HPSE,HELQ,AGPAT9 FAM175A,AGPAT9 NA NA NA NA AGPAT9 14477 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 85420434 85420908 85420714 Y NA NA NA NA NA NA CDS1 81224 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr4 86435968 86436285 86436110 Y NA ARHGAP24 NA NA NA NA ARHGAP24 41701 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 88128695 88128755 88128733 Y NA KLHL8 NA NA NA NA KLHL8 30711 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 88441557 88441872 88441810 Y SPARCL1 SPARCL1 NA NA NA NA SPARCL1 8341 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 88446974 88447282 88447233 Y MEPE,SPARCL1 SPARCL1 NA NA NA NA SPARCL1 2931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 88480312 88480555 88480436 Y NA SPARCL1 NA NA NA NA SPARCL1 30099 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 88899947 88900287 88900059 Y NA SPP1,RNU1-36P,PKD2 NA NA NA NA SPP1 5128 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 91049597 91049943 91049669 Y FAM190A NA NA NA NA NA SNCA 292131 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr4 95373822 95374139 95373960 Y PDLIM5 PDLIM5 NA NA NA NA PDLIM5 2785 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 99344407 99344641 99344524 Y NA NA NA NA NA NA RAP1GDS1 163872 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 100302211 100302395 100302286 Y ADH4,ADH6,ADH1A,ADH1B,ADH1C NA LOC100507053,ADH6,ADH1B,ADH1A,ADH5,ADH4 IMR90 Hi-C 24141950 ADH7 52499 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 102131266 102131303 102131283 Y NA NA NA NA NA NA PPP3CA 136132 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 104888285 104888590 104888438 Y NA NA NA NA NA NA CENPE 770719 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 106324406 106324791 106324687 Y NA NA NA NA NA NA PPA2 68447 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 106390941 106391445 106391094 Y TET2,TET2 PPA2 NA NA NA NA PPA2 1793 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 110887461 110887463 110887462 Y NA NA NA NA NA NA EGF 55421 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 111117471 111117868 111117585 Y NA ELOVL6 NA NA NA NA ELOVL6 487 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 117519495 117520605 117520296 Y NA ACTN4P1 NA NA NA NA ACTN4P1 2178 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 119115424 119115493 119115457 Y NA NA NA NA NA NA SNHG8 82371 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 119629667 119629850 119629760 Y NA METTL14 NA NA NA NA METTL14 25144 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 122611926 122612330 122612120 Y ANXA5 ANXA5 NA NA NA NA ANXA5 3938 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 140656102 140656508 140656327 Y MAML3 NA NA NA NA NA MGST2 71180 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 140727942 140728268 140728103 Y MAML3 NA NA NA NA NA MGST2 143020 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 141287573 141287758 141287638 Y NA RP11-425I13.1 NA NA NA NA RP11-425I13.1 1558 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 143742944 143743236 143743092 Y NA NA NA NA NA NA USP38 360834 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 144280232 144280410 144280287 Y USP38,SMARCA5,GAB1 GAB1 NA NA NA NA GAB1 24317 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 145956046 145956369 145956259 Y NA NA NA NA NA NA ABCE1 60715 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 145975837 145976119 145976108 Y NA ABCE1,ANAPC10 NA NA NA NA ABCE1 40965 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 152226044 152226315 152226216 Y NA NA NA NA NA NA FAM160A1 102053 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 154235645 154236052 154235798 Y TRIM2,TRIM2,RNF175 MND1 NA NA NA NA MND1 27749 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 154244307 154244410 154244359 Y NA MND1 NA NA NA NA MND1 19391 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 154360422 154360809 154360778 Y MND1,KIAA0922 KIAA0922 MND1,TRIM2,KIAA0922 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KIAA0922 24689 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 160191202 160191310 160191258 Y RAPGEF2 NA NA NA NA NA FNIP2 502912 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 160195976 160196239 160196029 Y RAPGEF2 NA NA NA NA NA FNIP2 507686 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 165882303 165882624 165882495 Y CPE,C4orf39 NACA3P NA NA NA NA NACA3P 19861 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 180979740 180980372 180979835 Y NA NA NA NA NA NA AC108142.1 2084030 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 184270914 184271169 184271084 Y NA CLDN22 CLDN24,CLDN22 IMR90 Hi-C 24141950 CLDN22 30987 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 184328356 184328744 184328447 Y CDKN2AIP CDKN2AIP WWC2,ODZ3,C4orf38,CLDN24,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 35000 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr4 184718887 184719489 184719407 Y NA NA ENPP6,CASP3 IMR90 Hi-C 24141950 TRAPPC11 140467 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 186227102 186227608 186227442 Y NA NA NA NA NA NA KIAA1430 98444 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr4 186481104 186481365 186481225 Y NA PDLIM3 PDLIM3,SORBS2 IMR90 Hi-C 24141950 PDLIM3 26338 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 53990 54174 54063 Y PLEKHG4B,C5orf55 NA LRRC14B,CCDC127,PLEKHG4B,SDHA IMR90 Hi-C 24141950 CCDC127 162156 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 373695 374160 373984 Y EXOC3 NA NA NA NA NA C5orf55 67098 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 672861 673336 673024 Y NA NA NA NA NA NA CEP72 62474 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 784651 785023 784908 Y ZDHHC11,TPPP NA NA NA NA NA TRIP13 105735 CAGE LC-1F hg19 FANTOM5 4.62720852263718 chr5 1470037 1470319 1470275 Y SLC12A7,LPCAT1 NA NA NA NA NA LPCAT1 51773 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 1503544 1504024 1503726 Y LPCAT1 LPCAT1 NA NA NA NA LPCAT1 18068 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 2740702 2741010 2740867 Y NA C5orf38,IRX2 NA NA NA NA C5orf38 9235 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 6712873 6713977 6713364 Y NA NA NA NA NA NA RP11-332J15.3 50027 CAGE LC-1F hg19 FANTOM5 6.16961136351624 chr5 14142803 14143164 14142969 Y TRIO TRIO NA NA NA NA TRIO 992 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 14208730 14209007 14208812 Y NA NA NA NA NA NA TRIO 66919 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 14264855 14265210 14264930 Y TRIO NA NA NA NA NA TRIO 123044 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 14268390 14268821 14268476 Y NA NA NA NA NA NA TRIO 126579 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 25910581 25911176 25910785 Y NA NA NA NA NA NA RP11-549K20.1 721816 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr5 31894536 31894834 31894609 Y NA CTD-2206G10.2 NA NA NA NA CTD-2206G10.2 26639 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 32366924 32367006 32366965 Y NA NA NA NA NA NA MTMR12 55809 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 34525926 34526105 34525960 Y NA NA RAI14,RAD1,BRIX1,TTC23L,DNAJC21 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 128237 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr5 36151218 36151404 36151252 Y C5orf33,C5orf33,SKP2,LMBRD2 LMBRD2,SKP2 NA NA NA NA SKP2 1127 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 36657665 36658163 36657813 Y NIPBL NA NA NA NA NA NIPBL 216698 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 37776965 37777327 37776998 Y NA NA NA NA NA NA WDR70 399651 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 38660472 38660667 38660594 Y LIFR NA EGFLAM,LIFR IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LIFR 54016 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 39072904 39073873 39073587 Y FYB,RICTOR RICTOR NA NA NA NA RICTOR 394 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 40754670 40754884 40754791 Y PTGER4 TTC33,PRKAA1 NA NA NA NA TTC33 593 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 41845041 41845055 41845050 Y OXCT1,FBXO4 OXCT1 NA NA NA NA OXCT1 23566 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 50263404 50263601 50263575 Y ISL1 NA NA NA NA NA PARP8 303671 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 52332019 52332357 52332083 Y FST,ITGA2 ITGA2 NA NA NA NA ITGA2 48863 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 54731133 54731267 54731160 Y NA NA NA NA NA NA RNF138P1 93262 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 54897039 54897427 54897238 Y IL6ST,PPAP2A NA NA NA NA NA PPAP2A 68161 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 55756528 55756674 55756600 Y NA AC022431.1 MAP3K1 IMR90 Hi-C 24141950 AC022431.1 42225 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 56131312 56131556 56131415 Y GPBP1,GPBP1,GPBP1,MAP3K1 MAP3K1 NA NA NA NA MAP3K1 21911 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 60108847 60109238 60109043 Y NA ELOVL7 NA NA NA NA ELOVL7 28978 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 60315642 60315784 60315678 Y NA NA NA NA NA NA NDUFAF2 76686 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 64710773 64711167 64710966 Y NA NA NA NA NA NA CENPK 145831 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 67898567 67898909 67898738 Y NA NA NA NA NA NA PIK3R1 389019 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 68338463 68338878 68338699 Y NA CTC-498J12.1,SLC30A5 NA NA NA NA CTC-498J12.1 815 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr5 71404360 71404518 71404455 Y MAP1B MAP1B NA NA NA NA MAP1B 3299 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 71424352 71424432 71424374 Y NA MAP1B NA NA NA NA MAP1B 23291 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 71481497 71481884 71481610 Y MAP1B NA NA NA NA NA MAP1B 80436 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 71790679 71790815 71790747 Y NA NA NA NA NA NA MRPS27 176206 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 72234221 72234359 72234290 Y FCHO2 FCHO2 NA NA NA NA FCHO2 15449 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 72880420 72880664 72880571 Y NA UTP15,ANKRA2 NA NA NA NA ANKRA2 20909 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 73330710 73331077 73330894 Y NA NA FAM169A,ENC1 IMR90 Hi-C 24141950 ANKRA2 471199 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 76086514 76086772 76086643 Y F2R F2RL1 NCRUPAR,F2R,IQGAP2 IMR90 Hi-C 24141950 F2RL1 25986 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 77026226 77026494 77026313 Y NA NA NA NA NA NA ACTBP2 52211 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 77589539 77589820 77589680 Y AP3B1 AP3B1 NA NA NA NA AP3B1 960 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 78270986 78271091 78271032 Y NA ARSB NA NA NA NA ARSB 8819 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 78612719 78612843 78612781 Y JMY NA NA NA NA NA JMY 82707 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 78843402 78843606 78843502 Y CMYA5,HOMER1 RP11-342F17.1,HOMER1,RP11-342F17.2 THBS4,BHMT2,HOMER1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-342F17.2 20277 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 78843882 78844075 78843988 Y NA RP11-342F17.1,HOMER1,RP11-342F17.2 THBS4,BHMT2,HOMER1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-342F17.2 20757 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 78990549 78990790 78990669 Y THBS4,CMYA5 NA NA NA NA NA PAPD4 84606 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 79376408 79376431 79376418 Y THBS4 NA NA NA NA NA MTX3 91326 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 79458255 79458620 79458438 Y MSH3,SERINC5 NA NA NA NA NA SERINC5 91278 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 81074673 81075064 81074862 Y NA SSBP2 SSBP2,ZCCHC9,ATG10 IMR90 Hi-C 24141950 SSBP2 29057 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 81147637 81148063 81147790 Y NA CTD-2249K22.1 ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTD-2249K22.1 2217 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr5 81934356 81934439 81934367 Y NA NA VCAN IMR90 Hi-C 24141950 RPS23 361960 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 82224684 82224708 82224696 Y NA NA NA NA NA NA XRCC4 146609 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 82770174 82770695 82770300 Y NA NA NA NA NA NA TMEM167A 398492 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 86617714 86617757 86617736 Y NA NA NA NA NA NA RASA1 56009 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 92593669 92593984 92593827 Y NA NA FLJ42709 IMR90 Hi-C 24141950 NPM1P27 423389 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 95406696 95406840 95406768 Y NA NA ELL2,MIR583 IMR90 Hi-C 24141950 ELL2 110921 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 99387251 99388845 99388529 Y NA NA NA NA NA NA CTD-2001C12.1 480121 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 99389717 99390411 99390143 Y NA NA NA NA NA NA CTD-2001C12.1 478555 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 106725486 106725757 106725607 Y NA NA NA NA NA NA EFNA5 278839 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 108791627 108791782 108791705 Y NA PJA2 PJA2 IMR90 Hi-C 24141950 PJA2 47932 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 111054290 111054596 111054444 Y C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13 NA NA NA NA NA STARD4 208002 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 111502817 111502914 111502867 Y C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,EPB41L4A EPB41L4A-AS1 NA NA NA NA EPB41L4A-AS1 8594 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 112219334 112219897 112219506 Y NA SRP19,REEP5 NA NA NA NA SRP19 24415 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 112251574 112251628 112251601 Y NA REEP5 NA NA NA NA REEP5 4608 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 112314594 112314663 112314629 Y NA DCP2 NA NA NA NA DCP2 4195 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 115911792 115912152 115911976 Y SEMA6A CTB-118N6.1,SEMA6A NA NA NA NA SEMA6A 3162 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 117774677 117774715 117774696 Y NA NA NA NA NA NA PTMAP2 532776 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 118610393 118610883 118610628 Y DMXL1,TNFAIP8,TNFAIP8 TNFAIP8 NA NA NA NA TNFAIP8 8006 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 118659966 118660476 118660173 Y NA NA NA NA NA NA TNFAIP8 57579 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 118662607 118662990 118662981 Y DMXL1,TNFAIP8,TNFAIP8 NA NA NA NA NA TNFAIP8 60220 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 118670685 118671156 118670901 Y TNFAIP8 NA NA NA NA NA TNFAIP8 68298 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 118742371 118742700 118742646 Y TNFAIP8,TNFAIP8 HSD17B4 NA NA NA NA HSD17B4 43438 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 123738017 123738276 123738143 Y NA NA NA NA NA NA RP11-436H11.1 404650 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 124006979 124007355 124007057 Y NA NA NA NA NA NA RP11-436H11.1 135571 CAGE LC-1F hg19 FANTOM5 5.39840994307671 chr5 126478879 126479210 126479043 Y NA NA NA NA NA NA C5orf63 71695 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 131832561 131832909 131832704 Y AFF4,SLC22A4,IRF1 IRF1 IRF1 IMR90 Hi-C 24141950 IRF1 8071 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 133681629 133682059 133681927 Y NA CDKL3,UBE2B NA NA NA NA CDKL3 22679 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 133801466 133801754 133801589 Y NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 55877 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 134259128 134259903 134259220 Y NA PCBD2,CTB-36O1.7,MTND6P4,MTND5P11,MTND4P12 NA NA NA NA MTND5P11 246 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr5 137799770 137800154 137799916 Y FAM13B,FAM53C,KDM3B,EGR1 REEP2,EGR1 NA NA NA NA EGR1 591 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 137800317 137800564 137800421 Y FAM13B,FAM53C,KDM3B,ETF1,EGR1 REEP2,EGR1 NA NA NA NA EGR1 1138 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 137827710 137828119 137827817 Y EGR1 EGR1,ETF1 NA NA NA NA EGR1 28531 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 138248139 138248403 138248239 Y NA NA NA NA NA NA AC034243.1 161141 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 138620359 138620541 138620439 Y UBE2D2,MATR3 MATR3,SIL1 NA NA NA NA SIL1 6705 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 138727034 138727338 138727139 Y LOC389333 SPATA24 NA NA NA NA SPATA24 10439 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 138897527 138897822 138897662 Y MATR3,MATR3,DNAJC18,PSD2 UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 UBE2D2 6194 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 138965572 138965797 138965632 Y NA NA NA NA NA NA CXXC5 59087 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 139078128 139078514 139078502 Y C5orf53,DNAJC18,CXXC5,NRG2,PSD2 NA NA NA NA NA CXXC5 53244 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 139132414 139132610 139132513 Y NA NA UBE2D2,CXXC5,DNAJC18,NRG2,CYSTM1 IMR90 Hi-C 24141950 CXXC5 107530 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 139135408 139135879 139135750 Y NA NA UBE2D2,CXXC5,DNAJC18,NRG2,CYSTM1 IMR90 Hi-C 24141950 CXXC5 110524 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 140090601 140091006 140090806 Y NA WDR55,HARS2,HARS,ZMAT2,VTRNA1-1 NA NA NA NA VTRNA1-1 1741 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr5 140098281 140098628 140098472 Y NA HARS2,HARS,ZMAT2,VTRNA1-1 NA NA NA NA VTRNA1-1 9421 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 140457576 140457668 140457630 Y NA PCDHB3 NA NA NA NA PCDHB3 20566 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 140893513 140893891 140893828 Y PCDH12,KIAA0141,DIAPH1 PCDHGC3 NA NA NA NA PCDHGC3 39933 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 140983787 140984197 140984031 Y PCDH12,KIAA0141,ARAP3,DIAPH1 DIAPH1,HDAC3,RELL2,FCHSD1 NA NA NA NA DIAPH1 12425 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 140985133 140985553 140985464 Y TAF7,PCDH12,KIAA0141,ARAP3,DIAPH1 DIAPH1,HDAC3,RELL2,FCHSD1 NA NA NA NA DIAPH1 11069 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 141138262 141138286 141138277 Y NA NA LOC729080,PCDH12,KIAA0141,RNF14,ARAP3,PCDH1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARAP3 78474 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 141404371 141404781 141404694 Y DIAPH1,FCHSD1 GNPDA1 GNPDA1,NDFIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GNPDA1 13765 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 142177810 142178601 142178297 Y ARHGAP26 ARHGAP26 NA NA NA NA ARHGAP26 29861 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 142384131 142384662 142384553 Y NR3C1,NR3C1,ARHGAP26 NA NA NA NA NA ARHGAP26 236182 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 142541504 142541934 142541585 Y NR3C1,NR3C1,ARHGAP26 NA NA NA NA NA RPL7P21 168236 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 147463828 147464105 147463998 Y NA NA NA NA NA NA RP11-373N22.3 297241 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 148172345 148172765 148172447 Y FBXO38,ADRB2 NA SH3TC2,ADRB2,ABLIM3 IMR90 Hi-C 24141950 ABLIM3 346281 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 149261958 149262272 149262115 Y NA NA NA NA NA NA SLC26A2 76028 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 149319494 149320025 149319793 Y CSNK1A1,CD74,CD74,SLC26A2,HMGXB3 SLC26A2 NA NA NA NA SLC26A2 18275 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 150461516 150462400 150461744 Y RBM22,DCTN4,DCTN4,C5orf62,SLC36A1,CCDC69,TNIP1 TNIP1 NA NA NA NA TNIP1 8738 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 151017311 151017607 151017366 Y FAT2 NA SLC36A1,FAT2,ATOX1 IMR90 Hi-C 24141950 RP11-54C4.1 126332 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr5 153809274 153809597 153809436 Y NA SAP30L NA NA NA NA SAP30L 13920 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 154062607 154063000 154062805 Y GEMIN5 LARP1 LARP1,C5orf4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LARP1 27462 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 154205315 154205569 154205444 Y KIF4B,GEMIN5 CNOT8 NA NA NA NA CNOT8 29544 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 154871450 154872048 154871744 Y KIF4B NA NA NA NA NA MRPL22 552820 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 158611896 158612266 158612182 Y IL12B,RNF145,RNF145,RNF145,RNF145,RNF145 CTB-11I22.1,RNF145 NA NA NA NA CTB-11I22.1 22663 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 159414162 159414427 159414404 Y NA TTC1 NA NA NA NA TTC1 19693 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 159434366 159434726 159434546 Y FABP6 TTC1 NA NA NA NA TTC1 246 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 159451021 159451194 159451125 Y NA TTC1 NA NA NA NA TTC1 16901 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 159637065 159637397 159637293 Y FABP6 RP11-34P1.2 NA NA NA NA RP11-34P1.2 45863 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 167741798 167742197 167741960 Y WWC1 WWC1 NA NA NA NA WWC1 25142 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 170662332 170662346 170662338 Y NA NA NA NA NA NA NPM1 149774 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 173169995 173170330 173170163 Y NA NA CPEB4 IMR90 Hi-C 24141950 BOD1 128332 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 173738914 173739193 173739170 Y HMP19 NA BOD1 IMR90 Hi-C 24141950 MSX2 410343 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 174472825 174472846 174472836 Y NA NA FLJ16171,DRD1 IMR90 Hi-C 24141950 MSX2 323289 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 174906234 174906555 174906308 Y NA SFXN1 NA NA NA NA SFXN1 4169 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 175111905 175112078 175111992 Y NA NA NA NA NA NA RN7SKP148 58714 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 176790168 176790403 176790363 Y DOK3,RGS14 LMAN2,GRK6 NA NA NA NA LMAN2 13315 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 177645477 177646261 177645593 Y NA HNRNPAB NA NA NA NA HNRNPAB 15969 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 177647239 177647603 177647383 Y CLK4,AGXT2L2 HNRNPAB NA NA NA NA HNRNPAB 17731 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr5 180611137 180611357 180611292 Y MGAT1 CTC-338M12.5,TRIM7,TRIM41,MIR4638 NA NA NA NA CTC-338M12.5 5567 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr5 180615428 180615595 180615512 Y NA CTC-338M12.5,TRIM7,TRIM41,MIR4638 NA NA NA NA CTC-338M12.5 1329 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 180616521 180617006 180616799 Y ZFP62,TRIM52,TRIM41 TRIM7,TRIM41,MIR4638,SNORD96A NA NA NA NA CTC-338M12.5 0 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 180633694 180634117 180633980 Y NA CTC-338M12.5,TRIM7,TRIM41,MIR4638,SNORD96A,CTC-338M12.4,GNB2L1 NA NA NA NA TRIM7 3401 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr5 180634441 180634803 180634658 Y NA CTC-338M12.5,TRIM7,TRIM41,MIR4638,SNORD96A,CTC-338M12.4,GNB2L1 NA NA NA NA TRIM7 4148 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 226754 226982 226912 Y IRF4,DUSP22 NA EXOC2,IRF4,DUSP22 IMR90 Hi-C 24141950 DUSP22 62648 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 3163246 3163428 3163368 Y NA BPHL,TUBB2A NA NA NA NA TUBB2A 7486 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 5724236 5724398 5724319 Y NA NA NA NA NA NA NRN1 280802 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 5996432 5996750 5996575 Y NA NRN1 NA NA NA NA NRN1 8450 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 6008887 6009261 6009138 Y NRN1 NRN1 NA NA NA NA NRN1 3687 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 6687140 6687567 6687361 Y NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 418263 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 6811454 6812228 6812086 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 293602 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 7544425 7544740 7544519 Y NA DSP,SNRNP48 NA NA NA NA DSP 4617 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 10587786 10588136 10587948 Y TMEM14B,GCNT2 NA NA NA NA NA PAK1IP1 104792 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 10771427 10771996 10771700 Y ELOVL2,MAK TMEM14B,SYCP2L NA NA NA NA SYCP2L 25400 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 11318376 11319012 11318732 Y TMEM170B,MAK,LOC221710,NEDD9,NEDD9 NA NA NA NA NA NEDD9 61569 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 11786479 11786713 11786596 Y NA NA HIVEP1,ADTRP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIVEP1 220282 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 14121845 14123283 14121874 Y NA CD83 NA NA NA NA CD83 5973 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 14711169 14711813 14711625 Y NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 532714 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 14717717 14717780 14717729 Y NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 526747 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 14721191 14721587 14721406 Y NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 522940 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 14725890 14726226 14726089 Y NA NA DTNBP1,JARID2 IMR90 Hi-C 24141950 JARID2 518301 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 14766593 14766865 14766789 Y JARID2 NA JARID2 IMR90 Hi-C 24141950 JARID2 477662 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr6 14777704 14777964 14777898 Y JARID2 NA JARID2 IMR90 Hi-C 24141950 JARID2 466563 CAGE LC-1F hg19 FANTOM5 10.7968198861534 chr6 15542142 15542162 15542152 Y JARID2 NA NA NA NA NA DTNBP1 119127 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 16151584 16151748 16151704 Y NA MYLIP NA NA NA NA MYLIP 24228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 16319874 16320274 16319989 Y MYLIP NA NA NA NA NA MYLIP 192518 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 16436821 16437137 16436938 Y MYLIP,ATXN1 NA NA NA NA NA MYLIP 309465 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 16588159 16588355 16588257 Y NA NA NA NA NA NA RP1-151F17.1 171014 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 16684658 16685097 16684682 Y ATXN1 NA NA NA NA NA RP1-151F17.1 74272 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 16714644 16714961 16714802 Y NA RP1-151F17.1,ATXN1 NA NA NA NA RP1-151F17.1 44408 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 17312081 17312238 17312192 Y RBM24 NA NA NA NA NA CAP2 79209 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 18153083 18153444 18153238 Y RNF144B,NHLRC1,KDM1B NHLRC1,KDM1B NA NA NA NA TPMT 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 20239709 20240042 20239874 Y E2F3 MBOAT1 MBOAT1 IMR90 Hi-C 24141950 MBOAT1 29039 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 20498349 20498567 20498410 Y MBOAT1 CDKAL1 NA NA NA NA CDKAL1 34121 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 21587723 21589288 21589205 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 2684 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 24584505 24584676 24584669 Y NA NA NA NA NA NA KIAA0319 59707 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr6 25836224 25836451 25836337 Y NA NA NA NA NA NA TRIM38 124579 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 25992254 25993073 25992840 Y NA TRIM38,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB NA NA NA NA HIST1H3A 25645 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr6 26026306 26026795 26026679 Y HIST1H1D,BTN3A3,BTN3A2,BTN3A2,BTN3A1,HIST1H2BD,HIST1H1E,TRIM38,HIST1H3A HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,HIST1H3C,HIST1H1C NA NA NA NA HIST1H4B 826 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr6 26126352 26126787 26126533 Y HIST1H4H,HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H2AE,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1C,HIST1H2AC,HIST1H4E,HIST1H1E HFE,HIST1H4C,HIST1H1T,HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD NA NA NA NA HIST1H2AC 3979 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr6 26521003 26521206 26521108 Y HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD,HIST1H1D,BTN3A2,BTN3A2,BTN2A2,BTN2A2,BTN2A2,BTN3A1,BTN3A3,BTN2A1,BTN2A1,ABT1 HCG11,HMGN4 NA NA NA NA HCG11 927 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 26521444 26521777 26521577 Y NA HCG11,HMGN4 NA NA NA NA HCG11 1368 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 27156271 27156423 27156401 Y NA HIST1H2BK,HIST1H2AH,RP11-209A2.1 HIST1H2BO,HIST1H2AM,OR2B2,LOC100507173,HIST1H4J,HIST1H3J,HIST1H2BK,MIR3143,HIST1H2AH,HIST1H2AI,HIST1H3H,HIST1H2BL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-209A2.1 20600 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 27375308 27375650 27375484 Y NA ZNF391 NA NA NA NA ZNF391 34914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 27655687 27656083 27655918 Y NA NA LOC100507173 MCF7,K562 ChIA-PET 22265404 HIST1H2BL 117626 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr6 27706104 27706357 27706299 Y NA NA NA NA NA NA HIST1H2BL 67352 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr6 27807310 27807672 27807617 Y ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H4L,HIST1H3J,HIST1H3I,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H1B HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2BPS2,HIST1H2AL,HIST1H3I,HIST1H4L NA NA NA NA HIST1H2BN 2987 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr6 27862895 27863061 27863012 Y ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,ZKSCAN4,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO HIST1H2BPS2,HIST1H2AL,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO NA NA NA NA HIST1H2BO 3692 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 28072476 28072872 28072543 Y HIST1H4K,HIST1H2AK,ZNF165,ZSCAN16,ZNF192 ZNF165,ZSCAN16 NA NA NA NA ZSCAN16 17466 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 28414953 28415259 28415025 Y NA ZSCAN12,ZSCAN23,COX11P1 NA NA NA NA COX11P1 2203 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 28457225 28458028 28457315 Y NA ZSCAN23,COX11P1 NA NA NA NA COX11P1 44475 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr6 28565127 28565440 28565259 Y NA SCAND3 SCAND3 MCF7 ChIA-PET 22265404 SCAND3 16549 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 28710805 28711035 28710922 Y NA NA NA NA NA NA XXbac-BPG308K3.5 93748 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 28956602 28956848 28956725 Y NA HCG15,ZNF311 NA NA NA NA HCG15 4622 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 29477023 29477149 29477086 Y NA NA NA NA NA NA HLA-F 211403 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 29932777 29932958 29932802 Y HLA-F,TRIM10,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,HLA-A HLA-K,HLA-A,HLA-J NA NA NA NA HLA-A 25740 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr6 30254050 30254472 30254356 Y NA HLA-L,TRIM39,HCG18 NA NA NA NA HLA-L 28689 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 30796195 30796565 30796398 Y HLA-E,PPP1R10,KIAA1949,KIAA1949,IER3 DDR1 IER3,FLOT1,DDR1,VARS2,GTF2H4,C6orf136,DHX16,C6orf15,PSORS1C1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 DDR1 45633 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 30845366 30845734 30845666 Y PPP1R10,KIAA1949,KIAA1949,IER3 DDR1,GTF2H4,VARS2 NA NA NA NA DDR1 3168 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 31240851 31241006 31240942 Y NCR3,LY6G5B,LTB,LST1,LST1,LST1,AIF1,AIF1,ABHD16A,ABHD16A,HLA-C,HLA-B HLA-C,RPL3P2 NA NA NA NA HLA-C 2944 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 31789672 31790268 31789876 Y NA VARS,LSM2,HSPA1A,HSPA1B,C6orf48,SNORD52,NEU1 NA NA NA NA HSPA1B 3244 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr6 32789030 32789171 32789101 Y HSD17B8,PSMB8 TAP2,TAPSAR1,PSMB9,PSMB8,TAP1 NA NA NA NA TAP2 15386 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 32952668 32952702 32952685 Y NA BRD2,HLA-DMA,BRD2-IT1 NA NA NA NA BRD2-IT1 16659 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 32956037 32956271 32956088 Y NA BRD2,HLA-DMA,BRD2-IT1 NA NA NA NA BRD2-IT1 20028 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 33684801 33685193 33684861 Y NA NA MNF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LEMD2 69720 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 34191726 34192136 34191830 Y C6orf1,HMGA1 CYCSP55,HMGA1,C6orf1,RPL35P2 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 CYCSP55 6510 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr6 36010041 36010276 36010159 Y NA MAPK14 NA NA NA NA MAPK14 16553 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 36409257 36409482 36409373 Y MAPK14,BRPF3,STK38,SRSF3,CDKN1A,CDKN1A,ETV7,ETV7,PXT1,KCTD20 KCTD20 NA NA NA NA KCTD20 713 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 37070053 37070857 37070460 Y CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2 NA PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 65122 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 37271813 37272101 37271931 Y PIM1,TBC1D22B TBC1D22B,TMEM217,RNF8 NA NA NA NA RNF8 47647 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 37647695 37647837 37647766 Y NA MDGA1 NA NA NA NA MDGA1 17245 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 38177110 38177509 38177276 Y NA NA NA NA NA NA ZFAND3 391835 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 39279620 39279758 39279742 Y NA NA NA NA NA NA KCNK5 84394 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 40904550 40904902 40904649 Y UNC5CL NA APOBEC2,C6orf130,TSPO2,UNC5CL IMR90 Hi-C 24141950 NFYA 133782 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 41649853 41650127 41649990 Y NA NA NA NA NA NA TFEB 51870 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 41929474 41929675 41929644 Y NA MED20,BYSL NA NA NA NA BYSL 42548 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr6 42420719 42421067 42420926 Y NA TRERF1 NA NA NA NA TRERF1 2930 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 42898508 42898648 42898552 Y NA C6orf226,CNPY3,RPL24P4,PEX6 NA NA NA NA CNPY3 3570 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 43878497 43878687 43878563 Y GTPBP2,MRPS18A NA NA NA NA NA VEGFA 142576 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 44096308 44096658 44096594 Y NA TMEM63B,MRPL14 NA NA NA NA MRPL14 3114 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr6 44169709 44170051 44169929 Y NA SLC29A1,HSP90AB1,MIR4647 NA NA NA NA SLC29A1 15191 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 44442929 44442983 44442944 Y NA NA NA NA NA NA CDC5L 89667 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 45391331 45391628 45391429 Y RUNX2 SUPT3H NA NA NA NA SUPT3H 47641 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 46628141 46628475 46628252 Y NA NA NA NA NA NA ENPP5 491433 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 50818020 50818494 50818241 Y NA NA NA NA NA NA MCM3 1329185 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr6 53454332 53454653 53454605 Y NA GCLC,RP1-27K12.2 KLHL31 IMR90 Hi-C 24141950 GCLC 25115 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 57267458 57267955 57267680 Y NA NA NA NA NA NA PRIM2 89855 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 66497189 66497296 66497284 Y NA NA NA NA NA NA PHF3 2153464 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 69543385 69543644 69543515 Y NA NA NA NA NA NA BAI3 200126 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 72294841 72295504 72295148 Y NA NA RIMS1 IMR90 Hi-C 24141950 LINC00472 166369 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 74518792 74518970 74518881 Y MB21D1,CD109,CD109 NA NA NA NA NA CD109 115284 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 74861347 74861685 74861516 Y NA NA COL12A1 IMR90 Hi-C 24141950 CD109 457839 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 83756669 83757034 83756938 Y PGM3,DOPEY1 DOPEY1 NA NA NA NA DOPEY1 18351 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 83935269 83935637 83935453 Y NA RWDD2A,PGM3 NA NA NA NA PGM3 33614 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 84139998 84140114 84140099 Y ME1 ME1 NA NA NA NA ME1 1201 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 90320520 90320873 90320697 Y NA LYRM2 NA NA NA NA LYRM2 25599 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 93802046 93802077 93802062 Y NA NA NA NA NA NA EPHA7 325188 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 95244699 95244909 95244803 Y NA NA NA NA NA NA MANEA 778510 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 105058323 105058655 105058647 Y LIN28B,HACE1 NA NA NA NA NA HACE1 247139 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 105073456 105073750 105073604 Y LIN28B NA NA NA NA NA HACE1 232044 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 105388915 105389637 105389155 Y HACE1 NA NA NA NA NA HACE1 83121 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 108895400 108895781 108895496 Y NA FOXO3 NA NA NA NA FOXO3 16362 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 112145008 112145393 112145362 Y REV3L,TRAF3IP2,FYN,FYN,FYN FYN NA NA NA NA FYN 47262 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 113950596 113950759 113950671 Y MARCKS RP11-367G18.1 MARCKS,FLJ34503,LOC285758,HDAC2 IMR90 Hi-C 24141950 RP11-367G18.1 18517 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 114176108 114176553 114176196 Y MARCKS NA NA NA NA NA MARCKS 0 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 124197824 124198181 124197872 Y NKAIN2 NA NA NA NA NA NKAIN2 74538 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 126241150 126241321 126241235 Y NCOA7 HINT3 NA NA NA NA HINT3 34606 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 127981338 127981402 127981371 Y NA NA NA NA NA NA RP3-403A15.1 226557 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 128607751 128608140 128608092 Y NA NA NA NA NA NA PTPRK 231730 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 129250577 129251100 129251039 Y NA NA NA NA NA NA PTPRK 410707 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 129855341 129855708 129855581 Y ARHGAP18 NA NA NA NA NA ARHGAP18 173662 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 130342212 130342458 130342393 Y SAMD3,SAMD3,L3MBTL3 L3MBTL3 NA NA NA NA L3MBTL3 9368 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 134620653 134620958 134620903 Y SGK1 SGK1 NA NA NA NA SGK1 16292 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 134635412 134635949 134635717 Y NA SGK1 NA NA NA NA SGK1 1301 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 136813959 136814231 136814138 Y MAP7,MAP7,MAP7,MAP7 NA NA NA NA NA MAP7 55726 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr6 138421052 138421264 138421123 Y PERP PERP NA NA NA NA PERP 5384 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 138426575 138426770 138426671 Y PERP NA NA NA NA NA PERP 0 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr6 138427134 138427492 138427302 Y PERP PERP NA NA NA NA PERP 486 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 139350632 139351255 139350885 Y NA REPS1 NA NA NA NA REPS1 43234 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 143247398 143248213 143248022 Y HIVEP2 NA NA NA NA NA AIG1 131420 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 144066654 144067070 144066822 Y NA NA NA NA NA NA LTV1 95411 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 144384858 144385125 144384924 Y NA SF3B5 NA NA NA NA SF3B5 29629 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 144537313 144537754 144537668 Y NA TPT1P4 STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 TPT1P4 17211 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 147985018 147985058 147985038 Y NA NA NA NA NA NA SAMD5 156955 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 151042844 151043065 151042880 Y NA NA NA NA NA NA PLEKHG1 123845 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 154664890 154665258 154665161 Y IPCEF1 NA NA NA NA NA CNKSR3 164535 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr6 154830409 154830718 154830573 Y CNKSR3 CNKSR3 NA NA NA NA CNKSR3 616 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 157101566 157102083 157101700 Y ARID1B ARID1B NA NA NA NA ARID1B 4503 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr6 157342507 157343524 157343342 Y ARID1B,ZDHHC14 NA NA NA NA NA ARID1B 245444 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 157695432 157695688 157695582 Y NA TMEM242 NA NA NA NA TMEM242 46945 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 157738321 157738749 157738506 Y NA TMEM242 NA NA NA NA TMEM242 3884 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 158478416 158478907 158478642 Y NA NA NA NA NA NA SYNJ2 77528 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 158981403 158981866 158981661 Y NA NA NA NA NA NA DYNLT1 81905 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 159495451 159495612 159495554 Y SYTL3,TAGAP NA TAGAP IMR90 Hi-C 24141950 RSPH3 76232 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 163107728 163108018 163107873 Y PARK2,PACRG PARK2 NA NA NA NA PARK2 38785 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr6 163950759 163951099 163950781 Y NA NA NA NA NA NA QKI 117727 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 166385606 166385834 166385795 Y NA PDE10A NA NA NA NA PDE10A 12257 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 166422302 166422862 166422743 Y NA PDE10A NA NA NA NA PDE10A 24211 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 166970262 166970784 166970543 Y NA NA NA NA NA NA SFT2D1 216183 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 167411692 167411848 167411735 Y RNASET2,GPR31 RP11-514O12.4,RNASET2,FGFR1OP NA NA NA NA FGFR1OP 1022 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 167507570 167507764 167507695 Y RNASET2,GPR31,CCR6,CCR6 CCR6 NA NA NA NA CCR6 15531 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 167566314 167566582 167566478 Y RNASET2,GPR31 CCR6 NA NA NA NA CCR6 43019 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr6 168216462 168216639 168216532 Y NA MLLT4 NA NA NA NA MLLT4 8963 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 652642 652893 652768 Y PRKAR1B,ADAP1 NA NA NA NA NA PDGFA 94709 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 1270215 1270604 1270440 Y UNCX NA NA NA NA NA ZFAND2A 71820 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 1416814 1417157 1416984 Y NA NA NA NA NA NA MICALL2 79981 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 1571273 1571500 1571366 Y ZFAND2A,MAFK INTS1,MAFK,TMEM184A,PSMG3 NA NA NA NA MAFK 2923 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 1965570 1966023 1965918 Y NA NA NA NA NA NA MAD1L1 304855 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 2672306 2673216 2673099 Y LFNG,TTYH3 TTYH3 NA NA NA NA TTYH3 2721 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 2996430 2996653 2996492 Y LFNG NA NA NA NA NA GNA12 114472 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 3699539 3699733 3699636 Y SDK1 NA NA NA NA NA SDK1 360459 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 3877207 3877255 3877231 Y NA NA NA NA NA NA SDK1 538127 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 4133088 4133284 4133186 Y NA NA NA NA NA NA FOXK1 548104 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 4681329 4681565 4681443 Y MMD2 NA SDK1,FOXK1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXK1 0 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr7 5231323 5231672 5231498 Y WIPI2 WIPI2 NA NA NA NA WIPI2 3504 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 5492663 5492953 5492758 Y MMD2,SLC29A4 TNRC18 TNRC18 MCF7 ChIA-PET 22265404 TNRC18 29618 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 5609541 5610012 5609880 Y SLC29A4,TNRC18,FBXL18,FSCN1 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACTB 8126 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 5634980 5635411 5634989 Y AIMP2,FBXL18,ACTB,FSCN1 ACTB,FSCN1 RNF216 IMR90 Hi-C 24141950 FSCN1 4541 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 6049655 6049813 6049700 Y NA PMS2,AIMP2,EIF2AK1 NA NA NA NA AIMP2 2779 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 6096315 6096609 6096412 Y EIF2AK1 PMS2,AIMP2,EIF2AK1,AC004895.4,USP42 NA NA NA NA EIF2AK1 252 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 6677371 6677641 6677424 Y DAGLB,ZNF12,C7orf26 C7orf26,ZNF316 NA NA NA NA ZNF316 2418 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 8300852 8301132 8300960 Y ICA1,ICA1,ICA1 AC007009.1,ICA1 NA NA NA NA ICA1 535 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 9195924 9196036 9195980 Y NA NA NA NA NA NA ICA1 895607 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 9200213 9200579 9200435 Y NA NA NA NA NA NA ICA1 899896 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 13694099 13694114 13694107 Y NA NA NA NA NA NA ETV1 334936 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 13700759 13700990 13700876 Y NA NA NA NA NA NA ETV1 328060 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 13758700 13759051 13758876 Y NA NA NA NA NA NA ETV1 269999 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 17082630 17082968 17082726 Y AHR NA AHR IMR90 Hi-C 24141950 AHR 253278 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 20239036 20239390 20239182 Y TWISTNB MACC1 NA NA NA NA MACC1 15637 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 20837430 20837819 20837731 Y SP8 SP8,RPL23P8,LINC01162 SP8 K562 ChIA-PET 22265404 SP8 12925 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 22011633 22011901 22011770 Y NA CDCA7L NA NA NA NA CDCA7L 27931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 22122992 22123068 22123014 Y NA NA RAPGEF5 IMR90 Hi-C 24141950 CDCA7L 139290 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 22894313 22894860 22894668 Y STEAP1B,TOMM7 TOMM7,AC005682.5 NA NA NA NA AC005682.5 2516 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 25894654 25894946 25894846 Y NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 294914 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 25896515 25897081 25896801 Y NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 292779 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 25990725 25991211 25991018 Y NA NA NA NA NA NA NFE2L3 198649 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr7 26697823 26697978 26697927 Y NA NA NA NA NA NA SKAP2 334880 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 27176942 27177056 27176971 Y HOXA3,HOXA5 HOTAIRM1,HOXA1,HOXA-AS2,HOXA4,HOXA6 NA NA NA NA HOXA4 8524 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 28076890 28077172 28076964 Y CREB5 NA NA NA NA NA JAZF1 141190 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 28190212 28190323 28190268 Y NA JAZF1 NA NA NA NA JAZF1 28039 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 28893180 28893544 28893363 Y CREB5 NA CREB5 IMR90 Hi-C 24141950 JAZF1 674818 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 30636092 30636194 30636111 Y NA GGCT,GARS NA NA NA NA GARS 3795 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 30658764 30658962 30658863 Y NA GARS NA NA NA NA GARS 26467 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 32026855 32027150 32027002 Y NA NA NA NA NA NA LSM5 505745 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr7 33316298 33316594 33316442 Y NA NA NA NA NA NA BBS9 149442 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 35075861 35076697 35076367 Y NA NA NA NA NA NA TBX20 215061 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 42927750 42928726 42928340 Y NA C7orf25,MRPL32,PSMA2 NA NA NA NA C7orf25 21178 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr7 43652779 43653072 43652905 Y POLM,STK17A STK17A NA NA NA NA STK17A 32422 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 43657815 43658085 43657951 Y POLM,STK17A,URGCP STK17A NA NA NA NA STK17A 37458 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 43658377 43658532 43658408 Y POLM,STK17A,URGCP STK17A NA NA NA NA STK17A 38020 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 43670120 43670185 43670135 Y POLM,DBNL,STK17A STK17A NA NA NA NA STK17A 49763 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 43732901 43733056 43732913 Y DBNL,STK17A NA NA NA NA NA BLVRA 63223 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 43789186 43789414 43789300 Y NA BLVRA C7orf44,BLVRA MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 BLVRA 6865 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 44616133 44616490 44616314 Y NA DDX56,TMED4,OGDH NA NA NA NA TMED4 3396 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 45244610 45244975 45244795 Y PURB,MYO1G NA NA NA NA NA TBRG4 94964 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 48031393 48031616 48031481 Y HUS1 HUS1 HUS1 K562 ChIA-PET 22265404 HUS1 14215 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 49177785 49177982 49177884 Y NA NA NA NA NA NA ABCA13 968730 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 51370562 51370701 51370648 Y COBL COBL NA NA NA NA COBL 11814 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 55141624 55142112 55141893 Y SEC61G,EGFR NA NA NA NA NA EGFR 56910 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 57471842 57471971 57471867 Y NA NA NA NA NA NA GUSBP12 202538 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr7 61970082 61970606 61970553 Y NA NA NA NA NA NA ZNF727 1533215 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 63924105 63924304 63924148 Y NA HNRNPCP7 NA NA NA NA HNRNPCP7 34899 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 65613460 65613645 65613556 Y ASL,ASL CRCP NA NA NA NA CRCP 35869 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 72934537 72934921 72934642 Y NA BCL7B NA NA NA NA BAZ1B 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 75465283 75465439 75465360 Y MDH2 CCL26,RHBDD2 STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR IMR90 Hi-C 24141950 RHBDD2 4481 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 75795833 75796053 75795969 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 120464 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 75923846 75924306 75924205 Y HSPB1 HSPB1 NA NA NA NA HSPB1 5555 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 75948116 75948327 75948250 Y RHBDD2 HSPB1,YWHAG NA NA NA NA HSPB1 18255 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 76002661 76002791 76002762 Y POR YWHAG,ZP3 NA NA NA NA YWHAG 16313 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 77910166 77910185 77910178 Y NA NA NA NA NA NA PHTF2 484044 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 86637666 86638039 86637853 Y NA KIAA1324L NA NA NA NA KIAA1324L 48976 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 91466585 91467314 91466893 Y NA MTERF NA NA NA NA MTERF 40720 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 92439060 92439368 92439205 Y PEX1,C7orf64,FAM133B,SAMD9 CDK6 NA NA NA NA CDK6 24540 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 93426376 93426400 93426388 Y NA NA NA NA NA NA BET1 205294 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 95765148 95765192 95765170 Y DYNC1I1,FLJ42280 NA NA NA NA NA SLC25A13 184267 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 95861904 95862185 95862172 Y NA NA NA NA NA NA SLC25A13 87274 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 96748066 96748124 96748095 Y NA ACN9 NA NA NA NA ACN9 4164 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 97913424 97913987 97913861 Y LMTK2,BRI3 TECPR1,BRI3 NA NA NA NA BRI3 33733 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 97994295 97994325 97994312 Y BAIAP2L1 RPS3AP26,BAIAP2L1 BRI3 IMR90 Hi-C 24141950 RPS3AP26 19571 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 98871923 98872129 98871984 Y NA ARPC1A NA NA NA NA ARPC1A 49392 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 99178135 99178365 99178354 Y ZNF789 ZNF655,FAM200A NA NA NA NA FAM200A 23976 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 100433472 100433773 100433685 Y NA SLC12A9,EPHB4,RP11-126L15.4,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHB4 10351 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 101609189 101609564 101609377 Y NA NA NA NA NA NA CUX1 152230 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 101929978 101930313 101930074 Y CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2 NA NA NA NA NA PRKRIP1 72006 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr7 102941984 102942200 102942104 Y NA PMPCB,PSMC2,DNAJC2,CTA-276O3.4 NA NA NA NA PMPCB 6115 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 104844953 104845066 104844998 Y NA NA NA NA NA NA SRPK2 192689 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 105223133 105223294 105223281 Y NA NA NA NA NA NA RINT1 52601 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 105459888 105460220 105459903 Y NA CTA-351J1.1 NA NA NA NA CTA-351J1.1 1950 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 105856842 105857229 105857099 Y NA NA NAMPT,CCDC71L IMR90 Hi-C 24141950 NAMPT 67543 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 106005704 106006316 106005855 Y FLJ36031,NAMPT NA CCDC71L,NAMPT,SYPL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAMPT 80932 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 106808132 106808705 106808532 Y NA HBP1 NA NA NA NA HBP1 726 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 106901302 106901364 106901333 Y NA NA NA NA NA NA HBP1 93896 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 107562078 107562130 107562088 Y NA DLD NA NA NA NA DLD 32663 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 107923246 107923634 107923440 Y NA NA NA NA NA NA NRCAM 171527 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 108056534 108056914 108056866 Y PNPLA8,DNAJB9 NRCAM NA NA NA NA NRCAM 38247 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 110808410 110808626 110808556 Y NA NA NA NA NA NA IMMP2L 391947 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 114637628 114638014 114637704 Y NA NA NA NA NA NA MDFIC 77419 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 117290130 117290152 117290141 Y NA NA NA NA NA NA NAA38 531934 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 117472298 117472618 117472458 Y CTTNBP2 NA NA NA NA NA NAA38 349468 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 119912248 119912651 119912361 Y KCND2 NA NA NA NA NA TSPAN12 583805 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 127259770 127260165 127259852 Y FSCN3 ARF5,GCC1,AC073934.6,SND1 NA NA NA NA GCC1 28105 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 127775885 127775901 127775893 Y NA NA SND1,MIR129-1 IMR90 Hi-C 24141950 LRRC4 105725 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 128170830 128171695 128171212 Y NA RP11-212P7.1 IMPDH1,HILPDA,METTL2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-212P7.1 37047 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr7 128696279 128696583 128696469 Y NA TNPO3 NA NA NA NA TNPO3 3081 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 129419118 129419176 129419138 Y NA NA UBE2H,NRF1 MCF7 ChIA-PET 22265404 NRF1 169563 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 129419876 129420343 129420085 Y NA NA NRF1,UBE2H MCF7 ChIA-PET 22265404 NRF1 170321 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 130013597 130013906 130013823 Y CPA2,CPA1 NA NA NA NA NA CEP41 66368 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 130589567 130590049 130589961 Y NA NA MIR29A,MIR29B1 IMR90 Hi-C 24141950 MKLN1 202806 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 130720133 130720826 130720768 Y MKLN1,MKLN1 NA NA NA NA NA MKLN1 72029 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 130735932 130736596 130736429 Y MKLN1 NA NA NA NA NA MKLN1 56259 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 130795999 130796263 130796171 Y MKLN1,MKLN1 MKLN1,LINC-PINT NA NA NA NA LINC-PINT 3064 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 133092941 133093104 133093022 Y NA NA NA NA NA NA EXOC4 157112 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 134247089 134247493 134247269 Y LRGUK AKR1B10 NA NA NA NA AKR1B10 36745 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 134845913 134846266 134846037 Y WDR91,CNOT4,TMEM140 C7orf49,WDR91 NA NA NA NA C7orf49 7281 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 135665513 135665767 135665568 Y NA MTPN NA NA NA NA MTPN 5412 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr7 137036619 137036971 137036795 Y NA NA NA NA NA NA CREB3L2 647842 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 137311444 137311452 137311448 Y NA NA NA NA NA NA CREB3L2 373361 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 137387266 137387617 137387499 Y NA NA NA NA NA NA CREB3L2 297196 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr7 139227178 139227349 139227257 Y NA ERHP1 NA NA NA NA ERHP1 10192 CAGE LC-1F hg19 FANTOM5 38.5600710219765 chr7 139616229 139616509 139616457 Y NA NA NA NA NA NA HIPK2 140652 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 139930863 139931473 139931211 Y TBXAS1,JHDM1D NA LOC100134229,JHDM1D MCF7 ChIA-PET 22265404 PARP12 169342 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 140271542 140271796 140271668 Y NA NA NA NA NA NA MKRN1 94173 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 140613036 140613224 140613135 Y NA BRAF NA NA NA NA BRAF 9340 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 143589612 143589642 143589628 Y OR2F1,OR2A2,OR2A25,OR2A12,TAS2R60,FAM115A,FAM115A,FAM115A FAM115A NA NA NA NA FAM115A 7649 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 146230197 146230393 146230208 Y NA NA NA NA NA NA TPK1 1698709 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 148424586 148424815 148424779 Y NA CUL1 NA NA NA NA CUL1 31580 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 148638273 148638633 148638462 Y NA NA EZH2,ZNF786,ZNF398,ZNF425,CUL1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZH2 58860 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr7 148684338 148684706 148684475 Y NA PDIA4 NA NA NA NA PDIA4 39027 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr7 149191913 149192296 149192075 Y SSPO,ZNF746 ZNF746 NA NA NA NA ZNF746 612 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 149193399 149193541 149193458 Y ZNF467,ZNF746 ZNF746 NA NA NA NA ZNF746 491 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr7 149318954 149319342 149319148 Y ZNF746,SSPO ZNF767 NA NA NA NA ZNF767 501 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 149468740 149469267 149468803 Y NA ZNF467 NA NA NA NA ZNF467 172 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 151479942 151479960 151479953 Y NA NA NA NA NA NA PRKAG2-AS1 92167 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 151493401 151493985 151493754 Y RHEB,PRKAG2,PRKAG2 NA NA NA NA NA PRKAG2-AS1 78142 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 152160715 152161193 152160959 Y NA NA NA NA NA NA XRCC2 210057 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 152161348 152162014 152161594 Y NA NA NA NA NA NA XRCC2 209236 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 153573062 153573453 153573116 Y NA NA NA NA NA NA ACTR3B 1118228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 153585684 153585818 153585716 Y DPP6,DPP6,DPP6 NA NA NA NA NA ACTR3B 1130850 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 153876218 153876403 153876311 Y NA NA NA NA NA NA PAXIP1 916391 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 155276719 155276807 155276762 Y PAXIP1,CNPY1 NA NA NA NA NA RBM33 158338 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr7 157034052 157034373 157034213 Y NA NA NA NA NA NA RP4-814D15.2 50990 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 157071910 157072285 157071928 Y NA NA NA NA NA NA DNAJB6 53790 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 157082177 157082296 157082243 Y NA DNAJB6 NA NA NA NA DNAJB6 43779 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 157334866 157335140 157335002 Y DNAJB6,DNAJB6 NA NA NA NA NA DNAJB6 208791 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 157924006 157924393 157924072 Y PTPRN2 NA NA NA NA NA NCAPG2 571127 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 157956905 157957265 157957085 Y PTPRN2 NA NA NA NA NA NCAPG2 538255 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr7 158301829 158302021 158301840 Y NA NA NA NA NA NA NCAPG2 193499 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr7 158500449 158500649 158500582 Y NA NCAPG2 NA NA NA NA NCAPG2 4929 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr8 1060714 1060735 1060723 Y NA NA NA NA NA NA ERICH1 374608 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 1968833 1969147 1968911 Y KBTBD11 NA NA NA NA NA ARHGEF10 198691 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 2263330 2263439 2263406 Y NA NA NA NA NA NA ARHGEF10 493188 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 2591169 2591450 2591225 Y NA NA NA NA NA NA ARHGEF10 821027 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 6323096 6323426 6323195 Y NA NA NA NA NA NA MCPH1 60983 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 8830847 8830920 8830884 Y NA ERI1 FLJ10661,MFHAS1,SGK223 IMR90 Hi-C 24141950 ERI1 26737 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 9912937 9913246 9913138 Y NA MSRA NA NA NA NA MSRA 3159 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 10191869 10192038 10191953 Y NA NA NA NA NA NA MSRA 282091 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 11310026 11310392 11310209 Y NA NA NA NA NA NA AF131216.5 107015 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 16476986 16477261 16477122 Y NA NA NA NA NA NA ZDHHC2 534277 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 17888641 17888793 17888717 Y NAT1 NA NA NA NA NA CTD-2547L16.1 51584 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 19576483 19576522 19576494 Y NA NA CSGALNACT1,SH2D4A,PSD3 IMR90 Hi-C 24141950 INTS10 96129 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 20296556 20296833 20296693 Y NA NA NA NA NA NA ATP6V1B2 243678 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 21775759 21776194 21775973 Y PHYHIP,DOK2,NPM2 XPO7 NA NA NA NA XPO7 579 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 21867707 21867918 21867811 Y PHYHIP,LGI3,EPB49,EPB49,NPM2 NA NA NA NA NA FAM160B2 76752 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 23014689 23015093 23014900 Y NA NA NA NA NA NA TNFRSF10A 65546 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 23353842 23353942 23353892 Y TNFRSF10C,SLC25A37 ENTPD4,SLC25A37 NKX3-1,SLC25A37,NKX2-6 IMR90 Hi-C 24141950 SLC25A37 30376 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 24013716 24014104 24013764 Y STC1 NA STC1 IMR90 Hi-C 24141950 RNU1-148P 81045 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 25348135 25348483 25348309 Y CDCA2 KCTD9,CDCA2 NA NA NA NA CDCA2 33622 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 26466209 26466513 26466418 Y PPP2R2A,BNIP3L NA NA NA NA NA DPYSL2 96418 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 27219743 27220043 27219778 Y PTK2B,PTK2B NA NA NA NA NA PTK2B 52744 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 27464961 27465271 27465267 Y NA CLU,SCARA3 NA NA NA NA CLU 5277 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 28269273 28269920 28269515 Y ZNF395 ZNF395 NA NA NA NA ZNF395 11055 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 29758918 29759047 29759036 Y NA NA DUSP4,LOC286135,C8orf75 IMR90 Hi-C 24141950 TMEM66 179676 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 30015593 30015700 30015665 Y NA RPS15AP24,DCTN6 NA NA NA NA DCTN6 3780 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 30769723 30770025 30769859 Y NA NA TEX15,WRN,PPP2CB,PURG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2CB 99893 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 31498667 31498926 31498727 Y NRG1 NRG1 NA NA NA NA NRG1 3765 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 31861794 31862187 31861910 Y NRG1 NA NA NA NA NA NRG1 366892 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 32603273 32603561 32603417 Y NA NA NA NA NA NA FUT10 725379 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 35382808 35383133 35382968 Y NA LSM12P1 NA NA NA NA LSM12P1 1527 CAGE LC-1F hg19 FANTOM5 3.85600710219765 chr8 37376212 37376482 37376355 Y NA RP11-150O12.6 KCNU1,ERLIN2 IMR90 Hi-C 24141950 RP11-150O12.6 3673 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 38313401 38313535 38313485 Y NA FGFR1 NA NA NA NA FGFR1 10817 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 38781974 38782296 38782041 Y NA PLEKHA2 NA NA NA NA PLEKHA2 25221 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 38867572 38867594 38867583 Y C8orf86 TM2D2,ADAM9 NA NA NA NA ADAM9 15184 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 42377318 42377512 42377415 Y NA SLC20A2 NA NA NA NA SLC20A2 17557 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 47885401 47885427 47885415 Y NA NA NA NA NA NA RPL10AP2 181314 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 48350721 48350922 48350822 Y NA NA NA NA NA NA NDUFA5P12 276228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 52747281 52747589 52747434 Y NA NA NA NA NA NA PCMTD1 62146 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 54256811 54256964 54256882 Y NA NA NA NA NA NA RP11-463C14.1 366293 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 54884595 54884649 54884642 Y NA TCEA1 NA NA NA NA TCEA1 48440 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 55366813 55366957 55366864 Y NA NA SOX17 K562 ChIA-PET 22265404 MRPL15 321043 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 61626654 61626933 61626781 Y NA CHD7 NA NA NA NA CHD7 37317 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 61627150 61627529 61627187 Y NA CHD7 NA NA NA NA CHD7 37813 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr8 62566892 62567143 62567071 Y NA NA NA NA NA NA ASPH 58012 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 62600598 62600698 62600684 Y NA ASPH NA NA NA NA ASPH 24457 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 62634023 62634407 62634126 Y NA ASPH NA NA NA NA ASPH 8868 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 68105132 68105308 68105276 Y NA NA NA NA NA NA COPS5 111114 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 69744780 69745024 69744928 Y NA NA NA NA NA NA RP11-159H10.3 999322 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 71084923 71085298 71085131 Y NCOA2 NA NA NA NA NA RP11-152C15.1 70509 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 71106642 71106934 71106707 Y NCOA2 NA NA NA NA NA RP11-152C15.1 92228 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 71149519 71149670 71149631 Y NA NA NA NA NA NA RP11-152C15.1 135105 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 71569342 71569635 71569535 Y NA LACTB2 NA NA NA NA LACTB2 9774 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 72770493 72770720 72770591 Y MSC MSC NA NA NA NA MSC 15790 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 72947235 72947530 72947318 Y NA TRPA1 NA NA NA NA TRPA1 38322 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 74581626 74581813 74581790 Y NA NA NA NA NA NA STAU2 76130 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 79578942 79579038 79579012 Y IL7,FAM164A NA NA NA NA NA HEY1 1099060 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 80705910 80706255 80706054 Y HEY1 HEY1 HEY1,MRPS28 IMR90 Hi-C 24141950 HEY1 27812 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 82043336 82043603 82043470 Y NA PAG1 PAG1 IMR90 Hi-C 24141950 PAG1 21033 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 86090980 86091058 86091024 Y E2F5,E2F5 E2F5,C8orf59,CA13 NA NA NA NA E2F5 3520 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 88655608 88655638 88655622 Y NA NA NA NA NA NA CPNE3 1160549 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 90627835 90627903 90627892 Y NA NA MMP16 IMR90 Hi-C 24141950 RP11-37B2.1 140052 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 92301943 92301993 92301968 Y NA NA NA NA NA NA OTUD6B 221519 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 94835578 94835753 94835625 Y NA PDP1 NA NA NA NA PDP1 32282 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 95246535 95247070 95246768 Y GEM KB-1247B1.1 CDH17 IMR90 Hi-C 24141950 KB-1247B1.1 33255 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 98051049 98051098 98051078 Y NA NA NA NA NA NA TSPYL5 237078 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 98454033 98454434 98454234 Y NA NA PTDSS1,SDC2,CPQ,TSPYL5 IMR90 Hi-C 24141950 TSPYL5 165857 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 101773934 101774280 101774106 Y NA PABPC1 SNX31,PABPC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PABPC1 40897 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 101920209 101920392 101920320 Y PABPC1,ZNF706,ZNF706,YWHAZ,YWHAZ YWHAZ NA NA NA NA YWHAZ 43224 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr8 101920723 101921107 101920870 Y NA YWHAZ NA NA NA NA YWHAZ 42509 CAGE LC-1F hg19 FANTOM5 6.16961136351624 chr8 102167003 102167377 102167334 Y NA ZNF706 FLJ42969,YWHAZ,ZNF706 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF706 49044 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 102449376 102449720 102449428 Y GRHL2 NA NACAP1 MCF7 ChIA-PET 22265404 GRHL2 52940 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 102505547 102505759 102505677 Y GRHL2 GRHL2 NA NA NA NA GRHL2 2887 CAGE LC-1F hg19 FANTOM5 2.69920497153835 chr8 102505982 102506363 102506168 Y GRHL2 GRHL2 NA NA NA NA GRHL2 3322 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr8 102513804 102514123 102513992 Y NA GRHL2 NA NA NA NA GRHL2 11144 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 102516990 102517159 102517011 Y GRHL2 GRHL2 NA NA NA NA GRHL2 14330 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 103486772 103487100 103486937 Y NA NA ODF1 IMR90 Hi-C 24141950 UBR5 63703 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 103549220 103549421 103549330 Y NA NA UBR5,ODF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 116709 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 103669922 103670289 103670129 Y ATP6V1C1,KLF10,KLF10 KLF10 NA NA NA NA KLF10 3792 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 104792192 104792465 104792329 Y RIMS2 NA NA NA NA NA RP11-5A11.1 222575 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 106878097 106878155 106878126 Y NA NA OXR1 IMR90 Hi-C 24141950 RP11-395G23.3 402217 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 107709391 107709773 107709582 Y NA TAGLN2P1 NA NA NA NA TAGLN2P1 1150 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 108452941 108453080 108453009 Y NA NA NA NA NA NA TAGLN2P1 744700 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 109222483 109222836 109222544 Y NA NA NA NA NA NA EIF3E 222726 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 111381887 111381916 111381903 Y NA NA NA NA NA NA CTD-2544L4.1 183721 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 116454411 116454736 116454628 Y NA NA NA NA NA NA TRPS1 365163 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 119317381 119317491 119317437 Y NA NA NA NA NA NA EXT1 195289 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr8 119536968 119537364 119537323 Y NA NA NA NA NA NA SAMD12 94870 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 120124666 120124779 120124723 Y NA NA NA NA NA NA MAL2 50494 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 120476528 120476692 120476610 Y NA NOV NA NA NA NA NOV 49982 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 121092888 121093091 121092967 Y DEPTOR NA DEPTOR,DSCC1,COL14A1,TAF2,MRPL13 IMR90 Hi-C 24141950 DEPTOR 208931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 122157265 122157468 122157378 Y NA NA NA NA NA NA SNTB1 333752 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 124248679 124249062 124248866 Y NA C8orf76,ZHX1 NA NA NA NA C8orf76 2576 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 124816728 124816894 124816751 Y NA FAM91A1 NA NA NA NA FAM91A1 38032 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 125367728 125368050 125367886 Y TRMT12,TATDN1,NDUFB9 TMEM65 NA NA NA NA TMEM65 14883 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr8 126238973 126239274 126239019 Y NSMCE2,TRIB1 NA NA NA NA NA KIAA0196 136891 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 126290719 126290948 126290836 Y NA NA NA NA NA NA TRIB1 149615 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 126452500 126452812 126452633 Y KIAA0196,NSMCE2,TRIB1 TRIB1 NA NA NA NA TRIB1 11937 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128167127 128167527 128167484 Y NA NA NA NA NA NA CCAT1 61806 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128171088 128171312 128171255 Y NA NA PCAT1,POU5F1B,LOC727677 IMR90 Hi-C 24141950 CCAT1 58021 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr8 128179610 128179821 128179807 Y NA CCAT1 PCAT1,POU5F1B,LOC727677 IMR90 Hi-C 24141950 CCAT1 49512 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 128180134 128180587 128180334 Y NA CCAT1 PCAT1,POU5F1B,LOC727677 IMR90 Hi-C 24141950 CCAT1 48746 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr8 128203137 128203490 128203390 Y NA CCAT1 NA NA NA NA CCAT1 25843 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128218099 128218752 128218687 Y NA CCAT1 LOC727677,MYC IMR90 Hi-C 24141950 CCAT1 10581 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr8 128219153 128219489 128219426 Y NA CCAT1 LOC727677,MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCAT1 9844 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128222835 128223182 128223058 Y NA CCAT1 LOC727677,MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCAT1 6151 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 128227053 128227754 128227491 Y NA CCAT1 LOC727677,MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCAT1 1579 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128578179 128578386 128578271 Y NA NA LOC727677 IMR90 Hi-C 24141950 MYC 167294 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128678694 128678799 128678726 Y MYC NA MYC,PVT1 MCF7 ChIA-PET 22265404 MYC 66881 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 128680816 128681380 128681307 Y MYC NA MYC,PVT1 MCF7 ChIA-PET 22265404 MYC 64300 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 128930937 128931257 128931067 Y NA NA NA NA NA NA RNU4-25P 89600 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 129036981 129037022 129036995 Y NA RNU4-25P NA NA NA NA RNU4-25P 16124 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 129569050 129569202 129569118 Y NA NA MYC,PVT1 IMR90 Hi-C 24141950 RNU4-25P 548193 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 130983929 130984348 130984047 Y NA FAM49B NA NA NA NA FAM49B 43027 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 131296023 131296343 131296248 Y NA NA NA NA NA NA ASAP1 157563 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 133562041 133562364 133562205 Y HHLA1,KCNQ3,KCNQ3 NA NA NA NA NA TMEM71 208594 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr8 135843585 135843751 135843688 Y ZFAT MIR30D ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MIR30D 28397 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr8 141474376 141475403 141474918 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 TRAPPC9 7698 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 141598802 141599709 141599120 Y TRAPPC9,CHRAC1,EIF2C2 NA NA NA NA NA CHRAC1 79405 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 142105625 142105840 142105724 Y EIF2C2,SLC45A4,PTP4A3,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 19537 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 143533998 143534621 143534303 Y LYNX1,LYNX1,TSNARE1,BAI1 BAI1 BAI1,TSNARE1 MCF7 ChIA-PET 22265404 BAI1 5207 CAGE LC-1F hg19 FANTOM5 1.92800355109882 chr8 143548915 143549079 143548997 Y NA BAI1 NA NA NA NA BAI1 20124 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 143757526 143757895 143757616 Y NA JRK NA NA NA NA JRK 3491 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 144360422 144361034 144360946 Y ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT ZFP41,GLI4,RP13-582O9.5,ZNF696 NA NA NA NA RP13-582O9.5 826 CAGE LC-1F hg19 FANTOM5 2.31360426131859 chr8 144799188 144799437 144799334 Y MAPK15 ZNF707,FAM83H,FAM83H-AS1 NA NA NA NA FAM83H 14534 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 145025737 145026802 145026365 Y ZC3H3,GSDMD,NAPRT1,EEF1D,SPATC1,PLEC,PARP10 PLEC,GRINA NA NA NA NA PLEC 22100 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 145909879 145909957 145909931 Y SCRT1,KIFC2,LRRC24,ARHGAP39,ZNF517,ZNF34 ARHGAP39 ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP39 685 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr8 146010487 146010786 146010731 Y NA ZNF251,RPL8,ZNF7 NA NA NA NA ZNF34 0 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 2018040 2018611 2018274 Y SMARCA2 SMARCA2 NA NA NA NA SMARCA2 4698 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 2200625 2200752 2200689 Y NA NA NA NA NA NA SMARCA2 187283 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 2279055 2279418 2279226 Y NA NA NA NA NA NA SMARCA2 265713 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 3576230 3576494 3576362 Y NA NA NA NA NA NA RP11-509J21.1 51507 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 3971837 3971870 3971849 Y NA NA NA NA NA NA GLIS3-AS1 75195 CAGE LC-1F hg19 FANTOM5 3.47040639197788 chr9 4656742 4656927 4656747 Y PPAPDC2,CDC37L1,C9orf68 PPAPDC2,CDC37L1 NA NA NA NA PPAPDC2 3371 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 4670494 4670836 4670665 Y NA PPAPDC2,CDC37L1 NA NA NA NA CDC37L1 6723 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 4829866 4830028 4829909 Y NA RCL1,MIR101-2 NA NA NA NA MIR101-2 18263 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 6680895 6681975 6681336 Y UHRF2,KDM4C RP11-106A1.2,RP11-390F4.6,KDM4C KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 36888 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 8576629 8576984 8576673 Y NA NA NA NA NA NA RP11-134K1.2 134327 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 11065025 11065362 11065124 Y NA NA NA NA NA NA PTPRD 454302 CAGE LC-1F hg19 FANTOM5 6.555212073736 chr9 14322295 14322910 14322674 Y ZDHHC21,NFIB NA NA NA NA NA NFIB 74072 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 29213900 29214394 29214154 Y NA NA NA NA NA NA RBMXP2 1472709 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 33165457 33166051 33165900 Y DNAJA1,SMU1,NFX1,CHMP5,B4GALT1 B4GALT1 NA NA NA NA B4GALT1 103 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 34016159 34016420 34016379 Y NA UBAP2 NA NA NA NA UBAP2 30527 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 34158490 34158839 34158617 Y NA DCAF12,UBAP1 DCAF12,UBAP1,KIF24,NUDT2,PRSS3,UBAP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 UBAP1 18164 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 34179799 34180083 34180009 Y UBE2R2,UBAP1 UBAP1,RP11-571F15.3 NA NA NA NA UBAP1 2796 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 34394792 34394981 34394887 Y NA KIAA1161 NA NA NA NA KIAA1161 19941 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 34681857 34682174 34682025 Y ARID3C,IL11RA,IL11RA SIGMAR1,GALT,RP11-195F19.9,RP11-195F19.5 NA NA NA NA RP11-195F19.5 17748 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 35520478 35520852 35520494 Y NA NA NA NA NA NA TESK1 82515 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 35603577 35603740 35603659 Y RECK TESK1 NA NA NA NA TESK1 210 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 35603992 35604628 35604112 Y TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2 TESK1 NA NA NA NA TESK1 625 CAGE LC-1F hg19 FANTOM5 4.24160781241741 chr9 36166552 36166755 36166690 Y CREB3,TLN1 GLIPR2,CLTA NA NA NA NA CLTA 22098 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 36621370 36621719 36621545 Y NA NA NA NA NA NA MELK 50511 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 36764220 36764685 36764538 Y NA NA MELK IMR90 Hi-C 24141950 MELK 193361 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 36765862 36766252 36766147 Y RNF38,RNF38 NA MELK IMR90 Hi-C 24141950 MELK 195003 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 36924974 36925090 36925030 Y MELK NA NA NA NA NA ZCCHC7 193446 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 37030516 37030798 37030764 Y NA NA NA NA NA NA ZCCHC7 87738 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 37036641 37037011 37036829 Y ZCCHC7,ZBTB5,PAX5 NA NA NA NA NA ZCCHC7 81525 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 37859471 37859543 37859507 Y NA NA NA NA NA NA EXOSC3 60037 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 37914600 37914735 37914730 Y NA NA NA NA NA NA EXOSC3 115166 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 38066980 38067628 38067261 Y SHB NA NA NA NA NA SHB 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 38385653 38385753 38385720 Y ALDH1B1 ALDH1B1,IGFBPL1 NA NA NA NA ALDH1B1 4908 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 38437570 38437747 38437611 Y NA ALDH1B1,IGFBPL1 TOMM5,IGFBPL1,ALDH1B1 IMR90 Hi-C 24141950 IGFBPL1 15126 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 68417391 68418146 68417579 Y NA NA NA NA NA NA PIP5K1B 2900429 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 68423908 68424365 68424207 Y NA NA NA NA NA NA PIP5K1B 2894210 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 68455261 68455556 68455421 Y NA NA NA NA NA NA PIP5K1B 2863019 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 72360056 72360394 72360281 Y NA PTAR1 NA NA NA NA PTAR1 12481 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 73033763 73035382 73035076 Y SMC5,KLF9 NA TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SMC5 161826 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 73404281 73404648 73404524 Y TRPM3 NA NA NA NA NA SMC5 532344 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 75511457 75511847 75511682 Y NA NA NA NA NA NA ALDH1A1 181511 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 75562890 75563230 75563163 Y NA NA NA NA NA NA ALDH1A1 130128 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 77588894 77589149 77589022 Y NA C9orf40 NA NA NA NA C9orf40 23092 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 78511057 78511456 78511257 Y NA PCSK5 NA NA NA NA PCSK5 7497 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 86238855 86239256 86239056 Y UBQLN1,GKAP1 NA NA NA NA NA RP11-522I20.3 81253 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 87326939 87327108 87327024 Y NTRK2,NTRK2,NTRK2 NTRK2 NA NA NA NA NTRK2 45473 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 87370377 87370471 87370425 Y NA NA NA NA NA NA NTRK2 88911 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chr9 87655610 87656099 87655899 Y NA NA NA NA NA NA NTRK2 374144 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 89626902 89626982 89626949 Y NA CDC20P1 NA NA NA NA CDC20P1 2335 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 89699545 89699882 89699714 Y NA NA NA NA NA NA CDC20P1 74978 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 90328172 90328868 90328486 Y DAPK1,CTSL1 NA CTSL1 IMR90 Hi-C 24141950 RP11-40C6.2 189955 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 91795136 91795669 91795494 Y C9orf47,SHC3 NA NA NA NA NA CKS2 128444 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 93683361 93683758 93683679 Y NA NA NA NA NA NA SYK 121292 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 93975322 93975401 93975365 Y NA NA NA NA NA NA AUH 146794 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 95363262 95363623 95363482 Y NA NA NA NA NA NA IPPK 66924 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 95452860 95453088 95452974 Y NA IPPK NA NA NA NA IPPK 22313 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 95860928 95861146 95861059 Y IPPK,PHF2,C9orf89,NINJ1 SUSD3,C9orf89,NINJ1 NA NA NA NA C9orf89 4428 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 96928143 96928630 96928259 Y NA NA NA NA NA NA ZNF169 90963 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 98237628 98237804 98237716 Y NA NA NA NA NA NA RP11-435O5.2 50550 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 98273012 98273438 98273114 Y C9orf102,FANCC,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1 NA NA NA NA NA RP11-435O5.2 85934 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 98344805 98344906 98344856 Y NA NA FANCC,SLC35D2,LINC00092,C9orf102,LOC158435 IMR90 Hi-C 24141950 RP11-435O5.2 157727 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 99334926 99335181 99335054 Y NA CDC14B HABP4 IMR90 Hi-C 24141950 CDC14B 44931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 100880203 100880431 100880317 Y C9orf156,HEMGN,TRIM14,TRIM14 TRIM14 NA NA NA NA TRIM14 709 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 101011075 101011589 101011252 Y C9orf156,NANS,TBC1D2 TBC1D2 NA NA NA NA TBC1D2 4326 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 101554135 101554384 101554323 Y NA ANKS6,GALNT12 NA NA NA NA ANKS6 2863 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 101572840 101572995 101572898 Y GALNT12 ANKS6,GALNT12 NA NA NA NA GALNT12 4859 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 101819311 101819726 101819606 Y TGFBR1 TGFBR1 NA NA NA NA TGFBR1 44594 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 102580616 102580992 102580865 Y NA RP11-554F20.1 NA NA NA NA RP11-554F20.1 445 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 105957487 105957816 105957647 Y NA NA NA NA NA NA SMC2 896725 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 107730510 107730878 107730708 Y SLC44A1,FSD1L,FSD1L,ABCA1 ABCA1 ABCA1 IMR90 Hi-C 24141950 ABCA1 41992 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr9 107755412 107756258 107755691 Y ABCA1 NA ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABCA1 66894 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 108058871 108059613 108059363 Y ABCA1,TMEM38B,FSD1L,FSD1L NA NA NA NA NA SLC44A1 53968 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 109626456 109627144 109627032 Y NA ZNF462 NA NA NA NA ZNF462 3078 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 109933165 109933377 109933258 Y KLF4 NA ZNF462,MIR548Q,RAD23B IMR90 Hi-C 24141950 RAD23B 110041 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 110266981 110267369 110267173 Y NA KLF4,RP11-438P9.1 KLF4 MCF7 ChIA-PET 22265404 KLF4 16218 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 111773643 111773659 111773652 Y NA CTNNAL1 NA NA NA NA CTNNAL1 150 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 112076384 112076614 112076499 Y NA EPB41L4B NA NA NA NA EPB41L4B 4630 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 112162175 112162241 112162208 Y NA NA NA NA NA NA EPB41L4B 80931 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 113014576 113014999 113014920 Y AKAP2,TXN TXN NA NA NA NA TXN 1921 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 116280836 116280940 116280902 Y NA NA NA NA NA NA POLE3 109884 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 119722130 119722198 119722164 Y NA NA NA NA NA NA TRIM32 274549 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 120507373 120507587 120507563 Y NA NA NA NA NA NA ASTN2 332025 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 123251976 123252022 123252001 Y CDK5RAP2 NA NA NA NA NA CDK5RAP2 88426 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 123446824 123446976 123446902 Y TRAF1,TRAF1 MEGF9 NA NA NA NA MEGF9 27772 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 124131208 124131276 124131236 Y NA STOM GSN MCF7 ChIA-PET 22265404 STOM 677 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 124361597 124361984 124361689 Y NA NA NA NA NA NA STOM 231066 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 126468286 126468378 126468332 Y STRBP,STRBP NA NA NA NA NA DENND1A 222053 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 127329970 127330135 127330093 Y NA NA NA NA NA NA PSMB7 154247 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 128172483 128172773 128172647 Y NA NA PBX3 MCF7 ChIA-PET 22265404 GAPVD1 150410 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr9 129484571 129485188 129484881 Y NA NA NA NA NA NA ZBTB43 80097 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 129525777 129525955 129525866 Y FAM125B ZBTB43 LMX1B,FAM125B IMR90 Hi-C 24141950 ZBTB43 39330 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 132175926 132176326 132176076 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00963 67404 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 132244062 132244824 132244277 Y NA LINC00963 NA NA NA NA LINC00963 332 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 132257886 132258547 132258348 Y NA LINC00963 NA NA NA NA LINC00963 14156 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 132319720 132320056 132319894 Y DOLPP1 NA FAM73B,DOLPP1,IER5L,LOC100506190,METTL11A,PPP2R4,C9orf106,C9orf50 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00963 75990 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chr9 133565449 133565699 133565571 Y NA RP11-57C19.2,EXOSC2,ABL1 NA NA NA NA EXOSC2 1409 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 134248752 134249121 134248943 Y AIF1L,POMT1,PRRC2B PRRC2B PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 18359 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 134882586 134882673 134882600 Y SETX,NTNG2,MED27 NA NA NA NA NA MED27 70622 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 135859677 135859806 135859740 Y GBGT1,GFI1B TSC1,EEF1A1P5,GTF3C5 NA NA NA NA EEF1A1P5 33010 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 136009131 136009458 136009277 Y GTF3C4,DDX31,TSC1,RALGDS RALGDS NA NA NA NA RALGDS 27843 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 138233554 138233668 138233594 Y NA NA OLFM1 IMR90 Hi-C 24141950 PPP1R26 135257 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr9 140023869 140024391 140024239 Y NA MAN1B1,DPP7,GRIN1 GRIN1 K562 ChIA-PET 22265404 GRIN1 6451 CAGE LC-1F hg19 FANTOM5 10.0256184657139 chr9 140117588 140118357 140118103 Y C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1 ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B NA NA NA NA TUBB4B 15308 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 140134697 140134985 140134927 Y C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3 TPRN,TMEM203,NDOR1,TUBB4B NA NA NA NA TUBB4B 1032 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chr9 140163781 140164247 140164025 Y NA TUBB4B,NRARP NA NA NA NA TUBB4B 30116 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chr9 140190695 140190800 140190760 Y NA NRARP NA NA NA NA NRARP 3903 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chr9 140312019 140312179 140312116 Y LCNL1,ABCA2,FAM166A,C9orf173 EXD3,NOXA1 NA NA NA NA EXD3 3535 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 3732525 3732707 3732561 Y NA NA NA NA NA NA PRKX 102876 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 3732842 3733263 3733002 Y PRKX NA NA NA NA NA PRKX 103193 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 3870962 3871082 3871022 Y NA NA NA NA NA NA PRKX 241313 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 9225796 9226034 9225915 Y NA NA TBL1X IMR90 Hi-C 24141950 TBL1X 203301 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 9433838 9434425 9434365 Y TBL1X TBL1X NA NA NA NA TBL1X 4503 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 9701264 9701389 9701313 Y NA NA NA NA NA NA SHROOM2 51107 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 9979116 9979440 9979257 Y NA WWC3 SHROOM2,WWC3 IMR90 Hi-C 24141950 WWC3 2162 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 11061735 11061767 11061751 Y NA NA NA NA NA NA RP11-120D5.1 65494 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 14262210 14262757 14262259 Y NA NA NA NA NA NA GEMIN8 216198 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 15354246 15354416 15354344 Y ZRSR2,CA5B,MOSPD2,PIGA PIGA NA NA NA NA PIGA 2570 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 15493209 15493485 15493347 Y NA PIR NA NA NA NA PIR 16202 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 18693104 18693424 18693141 Y PHKA2,CDKL5 NA NA NA NA NA CDKL5 251401 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 20628422 20628647 20628433 Y NA NA NA NA NA NA RPS6KA3 344899 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 29496854 29497166 29496936 Y NA NA NA NA NA NA NR0B1 828549 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 39646201 39646652 39646229 Y NA GAPDHP1 NA NA NA NA GAPDHP1 811 CAGE LC-1F hg19 FANTOM5 6.555212073736 chrX 39873339 39874259 39873676 Y NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 160323 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 39965558 39965902 39965820 Y BCOR,BCOR NA NA NA NA NA BCOR 68680 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 39968932 39969265 39969200 Y BCOR NA NA NA NA NA BCOR 65317 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 40034694 40035505 40035056 Y BCOR,CXorf38,ATP6AP2,BCOR BCOR NA NA NA NA BCOR 112 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chrX 41058503 41058566 41058535 Y NA NA NA NA NA NA USP9X 115615 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 41538171 41538545 41538500 Y CASK NA NA NA NA NA CASK 242171 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 45241202 45241396 45241250 Y NA NA NA NA NA NA MIR222 363134 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 45626471 45627108 45626806 Y NA MIR222 MIR222,MIR221 IMR90 Hi-C 24141950 MIR222 21941 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 46278987 46279293 46279130 Y NA GAPDHP65 NA NA NA NA GAPDHP65 18856 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 47880817 47881226 47880903 Y SYN1 ZNF182 NA NA NA NA ZNF182 19440 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 49011448 49011844 49011738 Y GATA1,HDAC6,MAGIX GPKOW,PLP2,PRICKLE3,SYP MAGIX,PLP2 IMR90 Hi-C 24141950 PLP2 14429 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 52949996 52950343 52950129 Y TSPYL2,KDM5C,FAM156A FAM156B NA NA NA NA FAM156B 31660 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 53467837 53468052 53468003 Y KDM5C SMC1A,HSD17B10 NA NA NA NA HSD17B10 8517 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 56269843 56269989 56269918 Y NA KLF8 NA NA NA NA KLF8 12989 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 58292059 58292236 58292148 Y NA NA NA NA NA NA KRT8P17 282939 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 64888338 64888720 64888577 Y MSN NA NA NA NA NA MSN 82081 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 68004355 68004677 68004478 Y NA SERBP1P1,EFNB1 NA NA NA NA SERBP1P1 3040 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 68058070 68058239 68058155 Y NA EFNB1 NA NA NA NA EFNB1 11230 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 69653784 69653948 69653832 Y NA DLG3 NA NA NA NA DLG3 8763 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 69654278 69654566 69654417 Y DLG3 DLG3 NA NA NA NA DLG3 8145 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 70401853 70402134 70401993 Y IL2RG,MED12,TAF1,OGT,CXCR3,NONO NA NA NA NA NA MED12 65447 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 71635914 71636037 71635976 Y HDAC8 NA NA NA NA NA RPS4X 140764 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 73237406 73237798 73237506 Y CHIC1 RP13-36G14.3 NA NA NA NA RP13-36G14.3 46120 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 73250242 73250558 73250399 Y NA RP13-36G14.3 NA NA NA NA RP13-36G14.3 33360 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 73507125 73507445 73507287 Y NA FTX NA NA NA NA FTX 3964 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chrX 73791399 73791714 73791557 Y RLIM RLIM NA NA NA NA RLIM 40738 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 73833460 73833840 73833652 Y NA RLIM NA NA NA NA RLIM 1008 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 74143858 74143903 74143869 Y KIAA2022 NA NA NA NA NA ABCB7 230664 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 74370869 74370931 74370900 Y NA ABCB7 NA NA NA NA ABCB7 3636 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 84443490 84443657 84443574 Y SATL1,ZNF711 NA NA NA NA NA ZNF711 53340 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 85339971 85340972 85340615 Y NA CHM NA NA NA NA CHM 39405 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 87351155 87351521 87351339 Y NA RP3-452M16.1 NA NA NA NA RP3-452M16.1 929 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 87351546 87351899 87351791 Y NA RP3-452M16.1 NA NA NA NA RP3-452M16.1 1320 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 101914784 101914936 101914847 Y BHLHB9,GPRASP1,GPRASP1 NA NA NA NA NA BHLHB9 58680 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 106595212 106595632 106595477 Y NA NA NA NA NA NA NUP62CL 147542 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 106693156 106693529 106693316 Y NA NA NA NA NA NA PRPS1 176208 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 106919078 106919623 106919349 Y TSC22D3,TSC22D3 PRPS1 TSC22D3,PRPS1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PRPS1 49341 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 106920003 106920801 106920325 Y TSC22D3,TSC22D3 NA TSC22D3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PRPS1 50266 CAGE LC-1F hg19 FANTOM5 1.15680213065929 chrX 106985108 106985412 106985307 Y TSC22D3,TSC22D3,TSC22D3 TSC22D3 NA NA NA NA TSC22D3 33160 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 110678445 110678752 110678599 Y NA NA NA NA NA NA EIF4BP7 183965 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 115083189 115083554 115083375 Y NA NA NA NA NA NA RP11-761E20.1 0 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 115238483 115238690 115238635 Y NA NA NA NA NA NA RP11-761E20.1 155061 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 119385485 119385791 119385733 Y NA NKAPP1,ZBTB33 NA NA NA NA ZBTB33 2878 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 119619980 119620335 119620161 Y NA LAMP2 LAMP2 K562 ChIA-PET 22265404 LAMP2 18760 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 125606277 125607115 125606755 Y NA MTND4LP1,MTND4P24 NA NA NA NA MTND4P24 1409 CAGE LC-1F hg19 FANTOM5 3.08480568175812 chrX 129065451 129065820 129065554 Y NA UTP14A,BCORL1 NA NA NA NA UTP14A 27354 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 129245756 129246153 129246006 Y NA ELF4 NA NA NA NA ELF4 3065 CAGE LC-1F hg19 FANTOM5 0.771201420439529 chrX 129400519 129400680 129400638 Y NA ZNF280C NA NA NA NA ZNF280C 193 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 150152595 150153067 150152778 Y NA HMGB3,RPL19P21 NA NA NA NA HMGB3 5613 CAGE LC-1F hg19 FANTOM5 1.54240284087906 chrX 153596671 153598676 153598064 Y NA FLNA,EMD,RPL10,TAZ,DNASE1L1 NA NA NA NA FLNA 2330 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrX 153771070 153771275 153771201 Y IRAK1,MECP2,TEX28,TEX28,EMD,DNASE1L1,TAZ,ATP6AP1,F8A2,F8A1,LOC100132963,MPP1,GAB3,IKBKG,IKBKG,IKBKG FAM3A,IKBKG,G6PD NA NA NA NA G6PD 2512 CAGE LC-1F hg19 FANTOM5 0.385600710219765 chrY 28555690 28555797 28555743 Y NA NA NA NA NA NA RNU1-107P 688201 CAGE LC-1F hg19 FANTOM5 0.385600710219765