Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 101643795 101646474 101644884 N NA NA S1PR1 IMR90 Hi-C 24141950 S1PR1 55831 2 chr1 101686562 101688746 101687681 N NA S1PR1 NA NA NA NA S1PR1 13559 3 chr1 101755973 101779150 101773373,101775522,101778528,101770415 N,Y,N,N NA;S1PR1;NA;NA NA SLC30A7,DPH5 IMR90 Hi-C 24141950 S1PR1 53668 4 chr1 101821325 101824965 101823165 N NA NA NA NA NA NA S1PR1 119020 5 chr1 101829070 101877807 101830165,101836929,101839428,101875007 N,N,N,N NA;NA;NA;NA NA NA NA NA NA S1PR1 126765 6 chr1 104057873 104061494 104060395 N NA RNPC3 NA NA NA NA RNPC3 7084 7 chr1 109074968 109077537 109076674 N NA FAM102B FAM102B MCF7 ChIA-PET 22265404 FAM102B 25434 8 chr1 110069342 110071010 110070041 N NA ATXN7L2,CYB561D1,GNAI3 CYB561D1 MCF7 ChIA-PET 22265404 GNAI3 20176 9 chr1 110074237 110076794 110075411 N NA ATXN7L2,CYB561D1,GNAI3 CYB561D1,ATXN7L2,AMIGO1,SARS,PSMA5 MCF7,K562 ChIA-PET 22265404 GNAI3 14392 10 chr1 110358177 110360311 110358934 N NA NA CSF1,AHCYL1 IMR90 Hi-C 24141950 CSF1 92922 11 chr1 110436231 110439413 110437625 N NA CSF1 CSF1,EPS8L3,SORT1,PSMA5,GSTM3,GNAI3,GSTM4,AHCYL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CSF1 13820 12 chr1 110448007 110450176 110448982 Y GNAI3,AMPD2 CSF1 NA NA NA NA CSF1 3057 13 chr1 110625602 110628072 110627063 N NA FAM40A ALX3,FAM40A,AHCYL1 IMR90 Hi-C 24141950 FAM40A 48361 14 chr1 111754142 111766686 111758499,111755410,111763562,111766236 Y,N,N,N CD53,RAP1A,CEPT1,DENND2D,CHI3L2;NA;NA;NA DENND2D,CHI3L2 WDR77,OVGP1,C1orf88,CEPT1,PGCP1,RAP1A,DRAM2,CHI3L2,CHIA IMR90 Hi-C 24141950 CHI3L2 3595 15 chr1 112932924 112936257 112933609 N NA CTTNBP2NL CTTNBP2NL,WNT2B,MIR4256,ST7L,CAPZA1,RHOC,MOV10,PPM1J IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTTNBP2NL 2543 16 chr1 113392730 113394332 113393168 N NA NA FAM19A3,PPM1J IMR90 Hi-C 24141950 SLC16A1 104643 17 chr1 117279065 117283960 117281154 N NA NA CD101,TTF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD58 165350 18 chr1 117367548 117371123 117369828 N NA NA PTGFRN K562 ChIA-PET 22265404 TTF2 231826 19 chr1 117419535 117423326 117422005 Y TTF2 NA PTGFRN,TTF2 MCF7 ChIA-PET 22265404 TTF2 179623 20 chr1 118319054 118321610 118320459 N NA NA NA NA NA NA GDAP2 150692 21 chr1 119867760 119871450 119870173 N NA NA NA NA NA NA ZNF697 318940 22 chr1 120202282 120206380 120204945 N NA ZNF697,PHGDH ZNF697 IMR90 Hi-C 24141950 ZNF697 11892 23 chr1 142618407 142621253 142618797 N NA NA NA NA NA NA LOC100286793 1123334 24 chr1 142652786 142659108 142656169 N NA NA NA NA NA NA LOC100286793 1085479 25 chr1 142888473 142891736 142890964 N NA NA NA NA NA NA LOC100286793 852851 26 chr1 143442943 143446122 143444825 N NA NA NA NA NA NA LOC100286793 298465 27 chr1 143464054 143469739 143467684 N NA NA NA NA NA NA LOC100286793 274848 28 chr1 143671714 143675796 143673457 N NA NA NA NA NA NA LOC100286793 68791 29 chr1 144532260 144535416 144533875 Y PDE4DIP LOC728875 PDE4DIP,SEC22B,NOTCH2NL,HIST2H2AB,HIST2H2AC,HIST2H2BE,LOC728875 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC728875 10291 30 chr1 145091458 145093751 145092405 N NA SEC22B NBPF9,LOC653513,PDE4DIP,NOTCH2NL,SEC22B,LOC728875,NBPF10 IMR90 Hi-C 24141950 SEC22B 2656 31 chr1 145153948 145156761 145155174 N NA NA NOTCH2NL IMR90 Hi-C 24141950 NOTCH2NL 52350 32 chr1 145394437 145398404 145395604,145397481 N,N NA;NA TXNIP PDE4DIP,SEC22B,HFE2,GNRHR2,LIX1L,RBM8A,PIAS3,POLR3C,NUDT17,ANKRD35,TXNIP,ANKRD34A,POLR3GL,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TXNIP 40058 33 chr1 145967732 145971117 145969526 N NA NA NA NA NA NA GPR89C 83864 34 chr1 146554972 146558215 146556386 N NA NA CHD1L,LOC728989,PRKAB2,FMO5 K562,MCF7 ChIA-PET 22265404 PRKAB2 85914 35 chr1 147509466 147512968 147511255 N NA NA NA NA NA NA GPR89B 108960 36 chr1 147734493 147737279 147735715 N NA NA NA NA NA NA FLJ39739 194701 37 chr1 147790242 147791575 147790703 Y NA NA NA NA NA NA FLJ39739 140405 38 chr1 147805777 147808693 147807001 Y NA NA NA NA NA NA FLJ39739 123287 39 chr1 147859218 147863052 147860970 N NA NA NA NA NA NA FLJ39739 68928 40 chr1 147873436 147876368 147874673 N NA NA NA NA NA NA FLJ39739 55612 41 chr1 148175920 148179910 148176708 N NA NA NA NA NA NA NBPF14 150072 42 chr1 148240080 148243158 148241358 N NA NA NA NA NA NA NBPF14 214232 43 chr1 148246829 148249066 148248113 N NA NA NA NA NA NA NBPF14 220981 44 chr1 14841105 14850821 14844229,14847321,14849410 N,Y,N NA;NA;NA NA KAZN IMR90 Hi-C 24141950 PRDM2 814370 45 chr1 149192845 149195730 149194519 N NA NA NA NA NA NA LOC388692 83746 46 chr1 149222473 149224364 149223600 N NA NA NBPF10,SEC22B,NBPF15 MCF7 ChIA-PET 22265404 LOC388692 55112 47 chr1 149230020 149231700 149230793 N NA LOC388692 NA NA NA NA LOC388692 47776 48 chr1 149512669 149516220 149514360 N NA NA NA NA NA NA FAM91A2 60042 49 chr1 151445111 151449011 151445847,151447838 Y,N C1orf56,RIIAD1,OAZ3;NA POGZ RIIAD1,LOC100132111,TUFT1,CGN,SNX27,POGZ,PI4KB,PSMB4,CELF3,OAZ3,TDRKH,MRPL9,RORC,C2CD4D,THEM5 IMR90,MCF7,HELA,H1ESC,K562,GM12878 Hi-C,ChIA-PET,5C 24141950,22265404,22955621 POGZ 13170 50 chr1 152018918 152021764 152020696 N NA S100A11 NA NA NA NA S100A11 9407 51 chr1 154358461 154360779 154359281 Y GATAD2B,DENND4B,CRTC2,RPS27,UBAP2L,ATP8B2 IL6R IL6R,ATP8B2,UBE2Q1 IMR90 Hi-C 24141950 IL6R 16890 52 chr1 155606283 155608241 155607177 N NA MSTO1 NA NA NA NA MSTO1 26322 53 chr1 157150114 157152268 157151451 N NA ETV3 NA NA NA NA ETV3 41731 54 chr1 157818275 157820004 157819274 N NA NA FCRL1 IMR90 Hi-C 24141950 FCRL5 295965 55 chr1 158118136 158121355 158119516 Y NA CD1D LOC646268,KIRREL,AIM2 IMR90 Hi-C 24141950 CD1D 28382 56 chr1 158254495 158257512 158256325 N NA CD1C NA NA NA NA CD1C 2051 57 chr1 15925112 15932580 15930122 N NA DDI2 DDI2,TMEM82,PLEKHM2,SLC25A34,FBLIM1,DNAJC16,AGMAT IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDI2 11373 58 chr1 160419592 160427321 160423112 N NA NA NA NA NA NA SLAMF6 65731 59 chr1 160427863 160432119 160430262 N NA NA NA NA NA NA SLAMF6 60933 60 chr1 160694214 160700740 160696070,160698101 N,N NA;NA CD48,SLAMF7 CD48,SLAMF7 IMR90 Hi-C 24141950 SLAMF7 8337 61 chr1 160750681 160753237 160752340 N NA SLAMF7 NA NA NA NA SLAMF7 41604 62 chr1 160758816 160761816 160760036 N NA SLAMF7 NA NA NA NA SLAMF7 49739 63 chr1 161358443 161365525 161359926 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 74277 64 chr1 161367836 161377455 161369385 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 83670 65 chr1 161390632 161393017 161391310 N NA NA APOA2,TOMM40L,NDUFS2 IMR90 Hi-C 24141950 FCGR2A 82188 66 chr1 161396905 161399968 161397854 N NA NA APOA2,TOMM40L,NDUFS2 IMR90 Hi-C 24141950 FCGR2A 75237 67 chr1 161412728 161414296 161413334 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 FCGR2A 60909 68 chr1 161425886 161426982 161426117 N NA FCGR2A NDUFS2,DUSP12 IMR90 Hi-C 24141950 FCGR2A 48223 69 chr1 162595791 162597452 162596504 N NA DDR2 NA NA NA NA DDR2 4776 70 chr1 165566422 165569245 165567586 N NA MGST3 RXRG,LOC400794,UCK2,LOC440700,ALDH9A1,MGST3 IMR90 Hi-C 24141950 MGST3 30865 71 chr1 166455260 166460765 166459242 N NA NA NA NA NA NA POGK 347959 72 chr1 167585142 167589471 167586997 Y POU2F1,POU2F1,CD247,RCSD1 RCSD1 RCSD1 IMR90 Hi-C 24141950 RCSD1 10003 73 chr1 16822324 16828272 16825829 Y NA NA SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 NECAP2 55157 74 chr1 16839271 16843625 16840886 N NA NA NECAP2,SPATA21,CROCCP3,NBPF1,CROCC,CROCCP2,MST1P2,MIR3675,ESPNP,ARHGEF19,C1orf144,FBXO42 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NECAP2 72104 75 chr1 16846617 16848289 16846971 N NA NA CROCC,CROCCP3,NBPF1,ESPNP IMR90 Hi-C 24141950 NECAP2 79450 76 chr1 168478156 168480952 168479372 N NA NA C1orf114,BLZF1 IMR90 Hi-C 24141950 XCL1 64759 77 chr1 168979041 168983642 168979125,168982255 N,N NA;NA NA NA NA NA NA ATP1B1 92305 78 chr1 168991710 168996696 168994374 Y XCL2,XCL1 NA DPT,ATP1B1,NME7 IMR90 Hi-C 24141950 ATP1B1 79251 79 chr1 169012254 169019621 169013791,169017680 N,N NA;NA NA NME7 IMR90 Hi-C 24141950 ATP1B1 56326 80 chr1 169059059 169061868 169060558 N NA ATP1B1 NME7,XCL1,ATP1B1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP1B1 14079 81 chr1 171639413 171640140 171639780 N NA NA DNM3,VAMP4 IMR90 Hi-C 24141950 VAMP4 71239 82 chr1 17188099 17189529 17188440 N NA NA NA NA NA NA ATP13A2 148894 83 chr1 17220242 17224120 17222328 N NA NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 114303 84 chr1 17230002 17233011 17231534 Y PADI4,PADI2 NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 105412 85 chr1 175177702 175179458 175178400 N NA KIAA0040 NA NA NA NA KIAA0040 15473 86 chr1 175193747 175195124 175194727 N NA KIAA0040 PAPPA2,KIAA0040 IMR90 Hi-C 24141950 KIAA0040 31518 87 chr1 178574701 178577325 178575156 N NA NA RALGPS2,ANGPTL1,FAM20B,C1orf220 IMR90 Hi-C 24141950 C1orf220 62770 88 chr1 181095381 181158035 181099447,181104685,181122369,181110943 N,Y,N,Y NA;STX6,MR1,IER5;NA;STX6,MR1,IER5 IER5,GM140 KIAA1614,IER5,STX6,ACBD6,MR1,XPR1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IER5 37743 89 chr1 181397362 181402081 181397500,181399518 N,N NA;NA NA NA NA NA NA CACNA1E 50605 90 chr1 181411007 181415714 181413200 N NA CACNA1E NA NA NA NA CACNA1E 36972 91 chr1 181992883 182002453 181998967 Y GLUL,GLUL NA ZNF648 MCF7 ChIA-PET 22265404 GLUL 358888 92 chr1 183566870 183569233 183567856 Y NCF2,NCF2 NCF2,ARPC5,RGL1 DKFZP564C196,SMG7,NCF2,RGL1,ARPC5,LAMC1,NMNAT2 IMR90 Hi-C 24141950 NCF2 6814 93 chr1 185662599 185664409 185663276 N NA NA IVNS1ABP,SWT1,MIR548F1,HMCN1 IMR90 Hi-C 24141950 IVNS1ABP 376138 94 chr1 187040841 187044743 187042055 N NA NA NA NA NA NA PLA2G4A 242809 95 chr1 192484239 192489121 192486913 N NA NA RGS2,RGS1,UCHL5 IMR90 Hi-C 24141950 RGS1 55736 96 chr1 192497870 192501242 192499612 N NA RGS1 UCHL5,RGS1 IMR90 Hi-C 24141950 RGS1 43615 97 chr1 192511791 192516573 192514880 N NA RGS1 RGS1 IMR90 Hi-C 24141950 RGS1 28284 98 chr1 192517916 192530826 192519939,192527624 Y,N RGS2,RGS1;NA RGS1 RGS1 IMR90 Hi-C 24141950 RGS1 14031 99 chr1 19831599 19832860 19832241 N NA CAPZB CAPZB,C1orf151-NBL1 IMR90 Hi-C 24141950 CAPZB 19533 100 chr1 198564291 198572342 198567496,198571553 N,N NA;NA PTPRC NA NA NA NA PTPRC 35795 101 chr1 198588219 198592279 198590541 Y NEK7,PTPRC PTPRC NA NA NA NA PTPRC 15858 102 chr1 198602143 198604871 198602962 N NA PTPRC PTPRC IMR90 Hi-C 24141950 PTPRC 3266 103 chr1 200270207 200272382 200271542 N NA NA NR5A2,C1orf98 IMR90 Hi-C 24141950 ZNF281 106784 104 chr1 200383872 200386124 200385005 N NA ZNF281 ZNF281,C1orf98 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF281 4706 105 chr1 201137661 201141514 201140344 N NA TMEM9 CACNA1S,KIF21B,TMEM9,IGFN1,PKP1,TNNT2,LAD1,TNNI1 IMR90 Hi-C 24141950 TMEM9 14029 106 chr1 202816258 202818841 202817477 N NA KDM5B,RABIF NA NA NA NA KDM5B 38709 107 chr1 202819407 202821106 202819993 N NA KDM5B,RABIF PPP1R12B,KDM5B,LOC641515,KLHL12,ADIPOR1,LOC148709,RABIF,CYB5R1,TMEM183A,LOC401980 IMR90 Hi-C 24141950 RABIF 37279 108 chr1 203349204 203351329 203350210 N NA NA FMOD,ATP2B4,CHIT1,PRELP,LAX1,ZC3H11A IMR90 Hi-C 24141950 BTG2 74540 109 chr1 204475240 204476909 204475957 N NA PIK3C2B,MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 8598 110 chr1 204682872 204686100 204684193 Y NA NA NFASC,LRRN2 IMR90 Hi-C 24141950 MDM4 197365 111 chr1 206292277 206295164 206293049 N NA C1orf186 SLC26A9,C1orf186,CTSE,PM20D1 IMR90 Hi-C 24141950 C1orf186 3630 112 chr1 207482504 207483935 207483303 N NA CD55 PFKFB2,CD55,C4BPB,C4BPA IMR90 Hi-C 24141950 CD55 10882 113 chr1 207583992 207614880 207587253,207591868,207598301,207603253,207607480,207613725,207610855 N,N,N,N,N,N,Y NA;NA;NA;NA;NA;NA;NA CR2 C4BPA,PFKFB2,C4BPB,CR1,CR2,YOD1,TRPC5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 CR2 12765 114 chr1 208135692 208137474 208136755 N NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CD46 210309 115 chr1 209161397 209163396 209162433 N NA NA NA NA NA NA TRAF3IP3 765998 116 chr1 209202484 209214591 209213108 N NA NA NA NA NA NA TRAF3IP3 714803 117 chr1 209233399 209239652 209237293 N NA NA NA NA NA NA TRAF3IP3 689742 118 chr1 209258332 209262656 209260224 N NA NA NA NA NA NA TRAF3IP3 666738 119 chr1 209276678 209282967 209278802 N NA NA NA NA NA NA TRAF3IP3 646427 120 chr1 211768912 211781862 211779947 N NA SLC30A1 SLC30A1 K562,MCF7 ChIA-PET 22265404 SLC30A1 16813 121 chr1 212728027 212733790 212732356 Y NA NA ATF3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NENF 121798 122 chr1 213101030 213103351 213102101 Y VASH2 VASH2 FLVCR1,VASH2,TATDN3,NSL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 VASH2 20536 123 chr1 215173946 215175976 215175133 N NA NA CENPF IMR90 Hi-C 24141950 CENPF 397414 124 chr1 219632789 219636892 219635377 N NA NA NA NA NA NA LYPLAL1 285597 125 chr1 219637418 219640634 219639245 N NA NA RRP15,LOC643723 IMR90 Hi-C 24141950 LYPLAL1 290226 126 chr1 221927866 221931668 221929440 N NA DUSP10 DUSP10 K562 ChIA-PET 22265404 DUSP10 12350 127 chr1 221933047 221937636 221934971 N NA DUSP10 DUSP10 K562 ChIA-PET 22265404 DUSP10 17531 128 chr1 221948032 221954207 221950615,221952217,221949668 N,N,N NA;NA;NA DUSP10 DUSP10 IMR90 Hi-C 24141950 DUSP10 32516 129 chr1 221965358 221969160 221967459 N NA DUSP10 NA NA NA NA DUSP10 49842 130 chr1 221981586 221983876 221983064 Y DUSP10,DUSP10 NA DUSP10 IMR90 Hi-C 24141950 DUSP10 66070 131 chr1 222166294 222169251 222167871 Y DUSP10 NA DUSP10 IMR90 Hi-C 24141950 DUSP10 250778 132 chr1 222638169 222639510 222638816 Y NA NA DUSP10,MIA3,AIDA,BROX IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TAF1A 123765 133 chr1 22281100 22285538 22283142 N NA NA RAP1GAP,USP48,LDLRAD2,HSPG2,LINC00339,CDC42,CELA3B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00339 66169 134 chr1 224178519 224190710 224180389 Y NA NA NA NA NA NA FBXO28 111081 135 chr1 224684314 224688879 224685765 N NA NA WDR26,CNIH3 IMR90 Hi-C 24141950 WDR26 62313 136 chr1 224689967 224693577 224691184 N NA NA WDR26,CNIH3 IMR90 Hi-C 24141950 WDR26 67966 137 chr1 22502928 22518717 22504042 Y NA NA ZBTB40,C1QC,C1QA,WNT4,EPHA8,C1QB,EPHB2 IMR90 Hi-C 24141950 CDC42 123808 138 chr1 225628977 225630792 225629826 N NA LBR TMEM63A,LBR IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LBR 12420 139 chr1 225631958 225634214 225632719 N NA LBR TMEM63A,LBR,ENAH,SRP9,EPHX1,PYCR2,LEFTY2,C1orf55 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LBR 15401 140 chr1 226083809 226085742 226085010 Y LBR,H3F3A,C1orf55,TMEM63A TMEM63A,PYCR2 TMEM63A,LEFTY1,PYCR2 K562,MCF7 ChIA-PET 22265404 TMEM63A 13389 141 chr1 226189400 226191391 226190270 Y H3F3A,C1orf55 C1orf55 NA NA NA NA C1orf55 2334 142 chr1 226215786 226219518 226217275 N NA C1orf55,H3F3A C1orf55,H3F3A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C1orf55 28720 143 chr1 226295976 226300368 226298108 Y NA H3F3A ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 45568 144 chr1 226951120 226954055 226952415 N NA ITPKB ITPKB,C1orf95,PSEN2,ADCK3 IMR90 Hi-C 24141950 ITPKB 24244 145 chr1 226984910 226987700 226986560 N NA NA C1orf95,ITPKB IMR90 Hi-C 24141950 ITPKB 58034 146 chr1 227011183 227018886 227015866,227013114 N,N NA;NA PSEN2 ITPKB,C1orf95 IMR90 Hi-C 24141950 PSEN2 39387 147 chr1 227727914 227730980 227730419 N NA ZNF678 WNT9A,ZNF678 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF678 20240 148 chr1 233734802 233737355 233735658 N NA KCNK1 KCNK1 MCF7 ChIA-PET 22265404 KCNK1 12395 149 chr1 234622462 234626563 234624729 N NA TARBP1 TARBP1,IRF2BP2,LOC100506810,RBM34,ARID4B K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 TARBP1 7613 150 chr1 234633512 234637368 234635754 N NA TARBP1 LOC100506810,RBM34,IRF2BP2,LINC00184,LOC100506795 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TARBP1 18663 151 chr1 234805078 234812837 234811961 N NA LOC100506810 IRF2BP2,LOC100506810 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 46952 152 chr1 234824554 234833383 234832133 N NA LOC100506810 LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 26406 153 chr1 234834844 234837481 234836099 N NA LOC100506810 IRF2BP2,LINC00184,LOC100506810 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 22308 154 chr1 234898828 234909959 234904517,234908509 N,Y NA;IRF2BP2 LOC100506810 IRF2BP2,LINC00184,LOC100506810,LOC100506795,TOMM20,RBM34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 39039 155 chr1 234975594 234982297 234978750,234980406 Y,Y IRF2BP2;IRF2BP2 NA LINC00184,LOC100506810,IRF2BP2 IMR90 Hi-C 24141950 LOC100506810 115805 156 chr1 235060468 235066396 235061699 N NA NA LINC00184,IRF2BP2,TARBP1,LOC100506795,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 200679 157 chr1 235067086 235071354 235069260 N NA NA LINC00184,IRF2BP2,TARBP1,LOC100506795,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 207297 158 chr1 235079125 235083368 235080975 N NA NA IRF2BP2,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 208888 159 chr1 235088333 235100745 235090698,235097980 Y,Y IRF2BP2,ARID4B,ARID4B;IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810,TARBP1,LINC00184,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 191511 160 chr1 235104041 235110001 235106390 N NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 182255 161 chr1 235111558 235119150 235111630,235115725 N,N NA;NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 173106 162 chr1 235120633 235128166 235123226,235126814 N,N NA;NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 164090 163 chr1 235139241 235150455 235140984,235145389,235148035 N,N,N NA;NA;NA NA LINC00184,LOC100506810,TARBP1,LOC100506795,IRF2BP2 IMR90 Hi-C 24141950 TOMM20 141801 164 chr1 235156103 235161668 235158604,235161208,235157927 Y,N,N NA;NA;NA NA IRF2BP2 MCF7 ChIA-PET 22265404 TOMM20 130588 165 chr1 235168244 235172013 235170719 N NA NA LOC100506810,LINC00184,LOC100506795 IMR90 Hi-C 24141950 TOMM20 120243 166 chr1 235182151 235188723 235183846 N NA NA LINC00184,LOC100506795,LOC100506810,IRF2BP2 IMR90 Hi-C 24141950 TOMM20 103533 167 chr1 235242091 235249939 235242684,235246654 N,Y NA;ARID4B,ARID4B TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 42317 168 chr1 236283241 236286826 236284848 N NA GPR137B LGALS8,LGALS8-AS1,EDARADD,HEATR1,MTR,ERO1LB,GPR137B IMR90 Hi-C 24141950 GPR137B 19006 169 chr1 236466347 236468061 236467128 N NA ERO1LB GPR137B,EDARADD IMR90 Hi-C 24141950 ERO1LB 21008 170 chr1 23899615 23906289 23904591,23901248 N,N NA;NA E2F2,ID3,MDS2 E2F2,ID3,MDS2 IMR90 Hi-C 24141950 ID3 13330 171 chr1 23915791 23926381 23919445 N NA ID3,MDS2 E2F2,ID3,ASAP3,MDS2,TCEB3,HNRNPR,TCEA3,LOC100506963,ZNF436 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MDS2 27443 172 chr1 24045051 24048479 24045131,24047051 N,N NA;NA RPL11,TCEB3 RPL11 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TCEB3 21377 173 chr1 24053160 24065575 24054736 N NA RPL11,TCEB3,LOC100506963,PITHD1 RPL11,TCEB3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TCEB3 4281 174 chr1 244010513 244015339 244013949 N NA NA LOC339529 IMR90 Hi-C 24141950 ZNF238 199222 175 chr1 244401342 244404014 244402906 N NA NA SDCCAG8,AKT3,LOC339529,ZNF238 IMR90 Hi-C 24141950 ZNF238 186781 176 chr1 244460694 244464391 244462956 Y AKT3,AKT3,ADSS NA AKT3,SDCCAG8,LOC339529,C1orf100,ADSS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ADSS 151045 177 chr1 244481507 244490233 244483163,244488553 Y,N AKT3,AKT3,ADSS;NA NA SDCCAG8,ADSS,AKT3,C1orf100 IMR90 Hi-C 24141950 ADSS 125203 178 chr1 245081490 245083254 245082178 Y EFCAB2 NA SMYD3,EFCAB2,C1orf101,HNRNPU,PPPDE1,COX20 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 50030 179 chr1 248595107 248597823 248595427 N NA NA NA NA NA NA SH3BP5L 522331 180 chr1 249166080 249169586 249167990 N NA SH3BP5L,ZNF672,ZNF692,PGBD2 ZNF692,PGBD2,MIR3124,SH3BP5L K562,MCF7 ChIA-PET 22265404 ZNF692 12765 181 chr1 25030581 25032819 25032006 N NA CLIC4 SRRM1,CLIC4,RUNX3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLIC4 38941 182 chr1 25296949 25300094 25298904 Y C1orf63 RUNX3 CLIC4,RUNX3 IMR90 Hi-C 24141950 RUNX3 5448 183 chr1 25344730 25380066 25345975,25349332,25359128 Y,N,N RUNX3;NA;NA NA RUNX3,CLIC4,C1orf63,SYF2,C1orf130,SRRM1 IMR90 Hi-C 24141950 RUNX3 53229 184 chr1 25423746 25427413 25426153 N NA NA RUNX3,IL22RA1,CLIC4,SRRM1,SYF2 IMR90 Hi-C 24141950 SYF2 131600 185 chr1 25454001 25456368 25454897 N NA NA RUNX3,CLIC4,TMEM57 IMR90 Hi-C 24141950 SYF2 102645 186 chr1 25464835 25468378 25466830 Y RUNX3 NA RUNX3,GRHL3 IMR90 Hi-C 24141950 SYF2 90635 187 chr1 25592563 25596497 25593845 N NA SYF2,C1orf63 NA NA NA NA C1orf63 18578 188 chr1 26945600 26949504 26947822 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73018 189 chr1 28014982 28017768 28016328 N NA IFI6,FAM76A WASF2,PPP1R8,FAM76A,IFI6,STX12 IMR90 Hi-C 24141950 IFI6 16258 190 chr1 30144301 30146984 30145598 N NA NA PTPRU,MECR IMR90 Hi-C 24141950 MECR 586847 191 chr1 30160619 30162569 30161521 N NA NA PTPRU,MECR,MATN1,LOC100129196 IMR90 Hi-C 24141950 MECR 603165 192 chr1 30181154 30183693 30182255 N NA NA PTPRU,MECR,LOC100129196,MATN1 IMR90 Hi-C 24141950 MECR 623700 193 chr1 31235480 31243855 31238661,31242085 N,Y NA;LAPTM5 LOC100129196,LAPTM5 MATN1,LOC100129196,LAPTM5,SDC3,PUM1,SNORD103A,MECR,SNORD103B IMR90 Hi-C 24141950 LAPTM5 4797 194 chr1 31245735 31248232 31246872 N NA LAPTM5 LAPTM5,MECR,MATN1,LOC100129196,SNORD103A,SNORD103B,PUM1,SDC3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LAPTM5 15052 195 chr1 31866908 31868557 31867792 N NA SERINC2 ZCCHC17,FABP3,SERINC2,LOC284551 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERINC2 13855 196 chr1 31949343 31952080 31950352 N NA LOC149086,LOC284551 SERINC2,SNRNP40,HCRTR1,NKAIN1,FABP3,LOC149086,LOC284551,TINAGL1 IMR90 Hi-C 24141950 LOC149086 19759 197 chr1 31953144 31958018 31955877 N NA LOC149086,LOC284551 SERINC2,SNRNP40,HCRTR1,NKAIN1,FABP3,LOC149086,LOC284551,TINAGL1 IMR90 Hi-C 24141950 LOC149086 13821 198 chr1 32014023 32016641 32015654 N NA LOC149086,LOC284551 FABP3,SERINC2,LOC284551,PEF1,HCRTR1,NKAIN1,TINAGL1 IMR90 Hi-C 24141950 LOC284551 29987 199 chr1 32408466 32412380 32410087 N NA PTP4A2 KHDRBS1,SPOCD1 IMR90 Hi-C 24141950 PTP4A2 4478 200 chr1 32417658 32429135 32422769,32427398 N,N NA;NA PTP4A2 KHDRBS1,SPOCD1,PTP4A2,TINAGL1,COL16A1,PEF1,BAI2,TMEM39B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTP4A2 13670 201 chr1 32450138 32452803 32450821 N NA PTP4A2,KHDRBS1 SPOCD1,KHDRBS1,BAI2,COL16A1,TMEM39B,PTP4A2,KPNA6,CCDC28B,IQCC,TXLNA IMR90 Hi-C 24141950 KHDRBS1 26688 202 chr1 33434404 33448419 33439065,33446999 N,Y NA;RNF19B RNF19B RNF19B,AK2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19B 4118 203 chr1 33923335 33929536 33926712 Y RNF19B ZSCAN20 PHC2,ZNF362,ZSCAN20 IMR90 Hi-C 24141950 ZSCAN20 8696 204 chr1 34994339 34999428 34995881,34997854 N,N NA;NA NA CSMD2 IMR90 Hi-C 24141950 C1orf212 325989 205 chr1 38526904 38532189 38527678 N NA UTP11L,POU3F1 POU3F1 IMR90 Hi-C 24141950 POU3F1 14454 206 chr1 38637935 38640912 38639177 N NA NA LOC339442,RRAGC IMR90 Hi-C 24141950 POU3F1 125485 207 chr1 38939247 38949433 38940854,38942862 N,N NA;NA NA NA NA NA NA RRAGC 375907 208 chr1 39023506 39031582 39025019 N NA NA NA NA NA NA RRAGC 293758 209 chr1 39280809 39283088 39281774 N NA RRAGC LOC339442,POU3F1,RRAGC IMR90 Hi-C 24141950 RRAGC 42252 210 chr1 40263432 40266128 40265020 Y NA BMP8B HEYL,PPIE,BMP8B,MFSD2A,MACF1,NT5C1A,TRIT1,MYCL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 BMP8B 8899 211 chr1 41830772 41834243 41832017 N NA NA NA NA NA NA SCMH1 122957 212 chr1 42965223 42966700 42965667 N NA PPCS NA NA NA NA PPCS 43050 213 chr1 4402958 4406098 4404435 N NA NA NA NA NA NA LOC100133612 585990 214 chr1 44533005 44534731 44533884 N NA NA SLC6A9,DMAP1,RNF220,CCDC24 IMR90 Hi-C 24141950 CCDC24 75725 215 chr1 46631828 46634103 46632440 N NA PIK3R3 MAST2,PIK3R3 IMR90 Hi-C 24141950 PIK3R3 33120 216 chr1 51991104 52027233 51992058 N NA EPS15 OSBPL9,EPS15,NRD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EPS15 6109 217 chr1 53168331 53170369 53168926 Y NA SELRC1,ZYG11B SELRC1,CPT2 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SELRC1 4293 218 chr1 53827223 53835027 53831774,53833839 N,N NA;NA LRP8 GLIS1,LRP8,FLJ40434,YIPF1,LOC100507564,MAGOH,TMEM48 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LRP8 33402 219 chr1 54952909 54955820 54954148 Y SSBP3,SSBP3 NA TCEANC2,SSBP3,TMEM59,MRPL37,CYB5RL,CDCP2,C1orf177,YIPF1,DIO1,HSPB11,HEATR8-TTC4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP3 80817 220 chr1 55430600 55433206 55431810 Y NA NA TMEM61,HEATR8-TTC4,BSND,PCSK9 IMR90 Hi-C 24141950 DHCR24 77679 221 chr1 564337 570425 567396 N NA NA NA NA NA NA LINC00115 192477 222 chr1 56593417 56600560 56599053 N NA NA PPAP2B IMR90 Hi-C 24141950 LOC100507634 912336 223 chr1 58897547 58899490 58899141 N NA NA DAB1,CYP2J2,OMA1,FGGY IMR90 Hi-C 24141950 OMA1 112956 224 chr1 59049029 59051061 59049966 N NA OMA1,TACSTD2 MYSM1,FGGY,OMA1 IMR90 Hi-C 24141950 TACSTD2 5863 225 chr1 59387323 59390107 59388248 N NA NA LOC100131060,JUN,HSD52,FGGY,MIR4711 IMR90 Hi-C 24141950 LOC100131060 136500 226 chr1 59432801 59435269 59434254 N NA NA FGGY,LOC100131060,JUN,MIR4711 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100131060 181978 227 chr1 59470710 59481944 59471277,59474166,59479263 N,N,N NA;NA;NA NA FGGY,LOC100131060,JUN,HSD52,MIR4711 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100131060 219887 228 chr1 59484723 59499982 59485980,59491809 N,N NA;NA NA FGGY,LOC100131060,JUN,HSD52,MIR4711 IMR90 Hi-C 24141950 LOC100131060 233900 229 chr1 59510570 59517076 59511969 N NA NA FGGY,MIR4711,LOC100131060,JUN,HSD52 IMR90 Hi-C 24141950 LOC100131060 259747 230 chr1 59615858 59617996 59616733 Y NA NA HSD52,FGGY,JUN,LOC100131060,MIR4711 IMR90 Hi-C 24141950 LOC100131060 365035 231 chr1 59731136 59733513 59732228 N NA NA FGGY,LOC100131060,HSD52 IMR90 Hi-C 24141950 LOC100131060 480313 232 chr1 65531679 65535059 65533772 N NA NA AK4,DNAJC6,LEPR,JAK1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 AK4 78173 233 chr1 66903099 66906099 66905177 N NA NA PDE4B IMR90 Hi-C 24141950 MIER1 484479 234 chr1 66908344 66912972 66911295 Y MIER1,PDE4B NA PDE4B,SGIP1 IMR90 Hi-C 24141950 MIER1 477606 235 chr1 69520310 69522718 69521219 N NA NA NA NA NA NA DEPDC1 557511 236 chr1 76446475 76448916 76447276 N NA NA ST6GALNAC5 IMR90 Hi-C 24141950 MSH4 183919 237 chr1 77164853 77166793 77165900 N NA NA ST6GALNAC3 IMR90 Hi-C 24141950 MSH4 902297 238 chr1 8013022 8015724 8014322 N NA PARK7 NA NA NA NA PARK7 5990 239 chr1 8155012 8159223 8157625 Y NA NA ERRFI1,RERE,PARK7,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 68619 240 chr1 8229258 8231820 8229963 Y NA NA ERRFI1,SLC45A1,PARK7 IMR90 Hi-C 24141950 ERRFI1 142865 241 chr1 8342071 8344919 8343231 Y NA NA PARK7,ERRFI1,SLC45A1,RERE IMR90 Hi-C 24141950 ERRFI1 255678 242 chr1 83952005 83955509 83953820 N NA NA NA NA NA NA RPF1 989411 243 chr1 83964874 83967879 83966194 N NA NA NA NA NA NA RPF1 977041 244 chr1 84736397 84737987 84737474 N NA NA LPAR3,DNASE2B,UOX,SAMD13 IMR90 Hi-C 24141950 RPF1 206933 245 chr1 84902485 84903738 84903226 N NA RPF1 PRKACB,MCOLN3,LPAR3 IMR90 Hi-C 24141950 RPF1 41182 246 chr1 85063102 85067986 85064993 N NA CTBS GNG5,CTBS,PRKACB,MCOLN2,RPF1,C1orf180,UOX,LPAR3 IMR90 Hi-C 24141950 CTBS 22939 247 chr1 87913946 87917328 87915299 N NA NA LMO4 IMR90 Hi-C 24141950 LMO4 119795 248 chr1 9133976 9138080 9135889 N NA SLC2A5 NA NA NA NA SLC2A5 4089 249 chr1 92037234 92038678 92037793 Y NA NA TGFBR3,HSP90B3P,EPHX4,CDC7 IMR90 Hi-C 24141950 CDC7 70830 250 chr1 9235345 9261336 9242301,9256593 N,Y NA;NA GPR157,H6PD SLC2A7,SLC25A33,GPR157,MIR34A,H6PD,SPSB1,TMEM201,PIK3CD IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 H6PD 33527 251 chr1 93439658 93443214 93440897 N NA FAM69A FAM69A,RPL5 IMR90 Hi-C 24141950 FAM69A 12579 252 chr1 94166685 94169197 94167408 Y BCAR3 NA BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNTTIP2 175565 253 chr1 94173130 94175647 94174274 N NA NA BCAR3,MIR760 IMR90 Hi-C 24141950 DNTTIP2 169115 254 chr1 9472640 9476432 9473771 Y NA NA SPSB1,H6PD,SLC25A33 IMR90 Hi-C 24141950 SLC25A33 123096 255 chr1 94799179 94805420 94801036 N NA NA ARHGAP29,ABCA4,ABCD3,GCLM IMR90 Hi-C 24141950 ABCD3 78513 256 chr1 9487478 9491023 9489089 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 108505 257 chr1 95186544 95187231 95186997 Y NA NA F3,ABCD3,ALG14 IMR90 Hi-C 24141950 ABCD3 302611 258 chr10 1014868 1021621 1020397 N NA GTPBP4,IDI2-AS1 LARP4B,GTPBP4,IDI2-AS1,IDI2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 GTPBP4 12728 259 chr10 101772336 101775731 101773995 N NA DNMBP CUTC,COX15,ABCC2,DNMBP,DNMBP-AS1,CPN1 IMR90 Hi-C 24141950 DNMBP 2660 260 chr10 109185142 109187426 109186080 N NA NA NA NA NA NA XPNPEP1 2495885 261 chr10 109194870 109196626 109196158 N NA NA NA NA NA NA XPNPEP1 2486685 262 chr10 112113263 112119191 112117429,112115257 Y,Y DUSP5,MXI1;DUSP5 SMNDC1 SMC3,DUSP5,SMNDC1,RBM20 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMNDC1 48556 263 chr10 112146402 112149952 112147923 N NA NA SMC3,DUSP5 IMR90 Hi-C 24141950 SMNDC1 81695 264 chr10 112153363 112156693 112155625 Y DUSP5 NA SMC3,DUSP5 IMR90 Hi-C 24141950 SMNDC1 88656 265 chr10 112166878 112176820 112168152,112170816,112173604,112174574,112175196 Y,N,N,N,N DUSP5;NA;NA;NA;NA NA DUSP5,SMC3,SMNDC1 IMR90 Hi-C 24141950 DUSP5 80805 266 chr10 112201257 112202757 112201771 N NA NA DUSP5 IMR90 Hi-C 24141950 DUSP5 54868 267 chr10 113962222 113963923 113962771 N NA GPAM TECTB IMR90 Hi-C 24141950 GPAM 18685 268 chr10 115717114 115722257 115720420 N NA NA ADRB1,NHLRC2,DCLRE1A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ADRB1 81549 269 chr10 115741881 115744009 115743054 N NA NA DCLRE1A,NHLRC2,ADRB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ADRB1 59797 270 chr10 115783269 115786949 115784931,115786432 N,N NA;NA ADRB1 NHLRC2 IMR90 Hi-C 24141950 ADRB1 16857 271 chr10 115854920 115860449 115856757,115859205 N,N NA;NA NA NA NA NA NA ADRB1 51114 272 chr10 11721775 11728999 11726433 N NA NA USP6NL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 USP6NL 68096 273 chr10 11740251 11742457 11741486 N NA NA USP6NL,ECHDC3 IMR90 Hi-C 24141950 USP6NL 86572 274 chr10 12089640 12094921 12090744 N NA UPF2,DHTKD1 DHTKD1,SEC61A2,UPF2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 UPF2 4471 275 chr10 121461380 121468786 121464423,121468119 Y,N BAG3;NA INPP5F INPP5F,MCMBP,SEC23IP IMR90 Hi-C 24141950 INPP5F 16773 276 chr10 12381596 12385321 12383068 N NA CAMK1D CAMK1D IMR90 Hi-C 24141950 CAMK1D 6262 277 chr10 125147852 125156542 125150908 N NA NA NA NA NA NA BUB3 234092 278 chr10 125157609 125183912 125160330,125177174 N,N NA;NA NA NA NA NA NA BUB3 243849 279 chr10 125258829 125291589 125267054,125260848,125286871,125282627 N,N,N,N NA;NA;NA;NA NA HMX3,IKZF5,ACADSB IMR90 Hi-C 24141950 BUB3 345069 280 chr10 125295379 125300386 125298047 N NA NA IKZF5,ACADSB,HMX3 IMR90 Hi-C 24141950 BUB3 381619 281 chr10 125310153 125320383 125313182,125318154 N,N NA;NA NA ACADSB,IKZF5,HMX3 IMR90 Hi-C 24141950 BUB3 396393 282 chr10 126603775 126616349 126605388 N NA ZRANB1 ZRANB1,CTBP2,METTL10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZRANB1 14343 283 chr10 135460199 135463907 135462402 N NA NA NA NA NA NA MTG1 252578 284 chr10 135523397 135524682 135523682 N NA NA NA NA NA NA MTG1 315776 285 chr10 22517472 22519027 22518414 N NA LOC100130992 COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 21974 286 chr10 23011495 23013677 23012353 N NA PIP4K2A PIP4K2A,ARMC3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PIP4K2A 7992 287 chr10 26623144 26627241 26624561 N NA NA NA NA NA NA APBB1IP 100025 288 chr10 26660571 26667339 26661939 N NA NA NA NA NA NA APBB1IP 59927 289 chr10 26672726 26691085 26681404,26674379 Y,N ABI1,APBB1IP;NA APBB1IP NA NA NA NA APBB1IP 36181 290 chr10 27633071 27637514 27634443 N NA NA NA NA NA NA ACBD5 102003 291 chr10 27642380 27644645 27643807 N NA NA NA NA NA NA ACBD5 111312 292 chr10 30475044 30476505 30475683 N NA NA KIAA1462,SVIL IMR90 Hi-C 24141950 MTPAP 161762 293 chr10 30714447 30719241 30717020 N NA MAP3K8 MAP3K8,KIAA1462,LYZL2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 3709 294 chr10 30781695 30784335 30783248 Y MAP3K8 NA MAP3K8 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 58745 295 chr10 30790069 30792445 30791505 Y ZNF438,MAP3K8 NA MAP3K8,LOC729668 IMR90 Hi-C 24141950 MAP3K8 67119 296 chr10 30798693 30801582 30799803 Y ZNF438,MAP3K8 NA MAP3K8,LOC729668,KIAA1462 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 75743 297 chr10 30817374 30822073 30818618 Y MAP3K8,ZNF438 NA MAP3K8,KIAA1462,MTPAP,LOC729668,LYZL2 IMR90 Hi-C 24141950 MAP3K8 94424 298 chr10 30871743 30874532 30872865 Y MAP3K8,ZNF438,ZNF438 NA LOC729668 IMR90 Hi-C 24141950 MAP3K8 148793 299 chr10 30875113 30877911 30876737 Y MAP3K8,ZNF438,ZNF438 NA LOC729668,MAP3K8 IMR90 Hi-C 24141950 MAP3K8 152163 300 chr10 30989499 30996307 30990903,30995162 N,N NA;NA NA ZEB1,ARHGAP12,ZEB1-AS1,KIF5B IMR90 Hi-C 24141950 MAP3K8 266549 301 chr10 31023513 31033456 31026612,31031961 N,N NA;NA NA ZEB1,ARHGAP12,ZEB1-AS1,KIF5B,ZNF438 IMR90 Hi-C 24141950 MAP3K8 300563 302 chr10 31037705 31041981 31039856 N NA NA ZEB1,ARHGAP12,ZEB1-AS1,KIF5B,ZNF438 IMR90 Hi-C 24141950 MAP3K8 314755 303 chr10 31070763 31075387 31073357 N NA NA ARHGAP12,ZEB1-AS1,ZEB1,ZNF438 IMR90 Hi-C 24141950 MAP3K8 347813 304 chr10 31421209 31424516 31423203 N NA NA ARHGAP12,ZEB1,ZNF438,ZEB1-AS1 IMR90 Hi-C 24141950 ZEB1-AS1 183508 305 chr10 31891132 31893940 31892563 Y NA NA ZEB1,ARHGAP12,KIF5B IMR90 Hi-C 24141950 ZEB1 283031 306 chr10 31986140 31998777 31996718,31991032,31998342 N,N,N NA;NA;NA NA ARHGAP12,ZEB1,ZNF438 IMR90 Hi-C 24141950 ARHGAP12 218993 307 chr10 32044394 32051700 32049169 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166070 308 chr10 32656117 32669669 32667800 N NA EPC1 EPC1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EPC1 20004 309 chr10 32733883 32736702 32735069 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 97770 310 chr10 32833716 32839301 32834828 N NA NA NA NA NA NA EPC1 197603 311 chr10 33268474 33270752 33269610 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 21181 312 chr10 33991905 33995118 33993004 N NA NA PARD3 IMR90 Hi-C 24141950 ITGB1 744612 313 chr10 3790814 3793112 3792203 N NA KLF6 LOC338588,LOC100216001,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 34361 314 chr10 3851176 3855003 3853833,3852347 Y,Y KLF6;KLF6 KLF6 LOC100216001,LOC338588,KLF6,AKR1E2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 23703 315 chr10 3877190 3880240 3878291 Y KLF6 KLF6 KLF6,LOC100216001,LOC338588 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF6 49717 316 chr10 3914783 3919514 3917585 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 87310 317 chr10 3928628 3931096 3930072 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 101155 318 chr10 43854640 43859077 43857791 N NA HNRNPF FXYD4,HNRNPF,ZNF487P MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HNRNPF 45619 319 chr10 43914642 43917729 43916218 N NA HNRNPF,ZNF487P ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 9946 320 chr10 44089128 44091963 44090906 N NA ZNF485 ZNF485,ZNF32-AS3 IMR90 Hi-C 24141950 ZNF485 9892 321 chr10 44502340 44508238 44504217,44506612 N,N NA;NA NA TMEM72-AS1,C10orf136,LOC100506835,LOC283033,CXCL12 IMR90 Hi-C 24141950 ZNF32 358014 322 chr10 44514786 44517623 44516074 N NA NA LOC100506835 IMR90 Hi-C 24141950 ZNF32 370460 323 chr10 47633149 47642044 47640342 N NA NA LOC643650,GPRIN2,PPYR1 IMR90 Hi-C 24141950 FAM21B 251979 324 chr10 49491493 49497614 49496170,49493946 N,N NA;NA NA FRMPD2 MCF7 ChIA-PET 22265404 MAPK8 112073 325 chr10 49513318 49555736 49514614 N NA NA FRMPD2,ARHGAP22,MAPK8 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAPK8 53951 326 chr10 49868628 49882807 49876359,49880165 Y,N WDFY4;NA WDFY4 ARHGAP22,ERCC6,WDFY4,C10orf71 IMR90 Hi-C 24141950 WDFY4 10711 327 chr10 52405608 52409027 52407142 N NA SGMS1 SGMS1 IMR90 Hi-C 24141950 SGMS1 21871 328 chr10 52417459 52420852 52420030 N NA SGMS1 SGMS1 MCF7 ChIA-PET 22265404 SGMS1 33722 329 chr10 54723829 54726302 54725841 N NA NA NA NA NA NA CSTF2T 1264474 330 chr10 60752324 60754852 60753209 N NA NA NA NA NA NA TFAM 607148 331 chr10 60795309 60799972 60796728 Y NA NA NA NA NA NA TFAM 650133 332 chr10 6113001 6116571 6114356 N NA IL2RA,RBM17 IL2RA,LOC399715,RBM17 IMR90 Hi-C 24141950 IL2RA 8668 333 chr10 63626429 63629052 63627560 N NA ARID5B RHOBTB1,ARID5B IMR90 Hi-C 24141950 ARID5B 31961 334 chr10 64485305 64488028 64486356 N NA NA EGR2 IMR90 Hi-C 24141950 ADO 76488 335 chr10 64526203 64533653 64532495,64529560 N,N NA;NA ADO,EGR2 ZNF365,EGR2,ADO IMR90 Hi-C 24141950 ADO 30863 336 chr10 64589428 64591017 64590578 N NA ADO,EGR2 NA NA NA NA EGR2 10501 337 chr10 64612572 64614138 64613913 N NA ADO,EGR2 ZNF365 IMR90 Hi-C 24141950 EGR2 33645 338 chr10 64675713 64678727 64677277 N NA NA ZNF365 IMR90 Hi-C 24141950 EGR2 96786 339 chr10 64750944 64754701 64752253 N NA NA ZNF365 IMR90 Hi-C 24141950 NRBF2 138306 340 chr10 65428551 65432131 65430551 N NA NA JMJD1C IMR90 Hi-C 24141950 REEP3 147428 341 chr10 65469409 65472675 65470691 N NA NA JMJD1C,NRBF2,REEP3,ZNF365,LOC84989 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 REEP3 188286 342 chr10 67329777 67332883 67330668 N NA NA NA NA NA NA ANXA2P3 744492 343 chr10 67636680 67653187 67651255 N NA NA NA NA NA NA ANXA2P3 1051395 344 chr10 69522497 69525449 69524231 Y NA NA NA NA NA NA SIRT1 118978 345 chr10 69529623 69533917 69530811,69530270,69532931 N,N,N NA;NA;NA NA NA NA NA NA SIRT1 110510 346 chr10 69608762 69612439 69609297 Y NA SIRT1 SIRT1 K562 ChIA-PET 22265404 SIRT1 31988 347 chr10 6967982 6971083 6969895,6968184 N,N NA;NA NA SFMBT2,LOC100507127 IMR90 Hi-C 24141950 SFMBT2 482365 348 chr10 70802062 70827405 70804786,70812547,70816810,70821546,70825335 N,N,N,Y,N NA;NA;NA;DDX21,VPS26A,SRGN;NA SRGN DDX21,KIAA1279,VPS26A,SRGN,HKDC1,SUPV3L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SRGN 20423 349 chr10 73618913 73622319 73620510 Y DNAJB12,DDIT4,C10orf54,PSAP PSAP PSAP,C10orf54,CDH23,CHST3,SPOCK2,DNAJB12,ASCC1,ANAPC16 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PSAP 7831 350 chr10 73632658 73637427 73633568 N NA PSAP PSAP,CDH23,CHST3,SPOCK2,ASCC1,ANAPC16 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 21576 351 chr10 73646979 73651109 73648752 N NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 35897 352 chr10 7479660 7488792 7487287 N NA SFMBT2 PRKCQ,LOC439949,LOC100507127 IMR90 Hi-C 24141950 SFMBT2 26212 353 chr10 7496559 7501443 7499932 N NA SFMBT2 PRKCQ,LOC439949 IMR90 Hi-C 24141950 SFMBT2 43111 354 chr10 7504018 7528151 7513856,7512059,7517124,7523255,7520217,7526813 N,Y,N,Y,N,N NA;NA;NA;SFMBT2;NA;NA NA NA NA NA NA SFMBT2 50570 355 chr10 75715132 75718407 75716874 N NA PLAU,C10orf55,VCL CAMK2G,PLAU,C10orf55,VCL,AP3M1,LOC100507331,KIAA0913,NDST2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C10orf55 32597 356 chr10 76497428 76500814 76499073 N NA NA ADK,KAT6B,DUPD1,DUSP13,SAMD8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KAT6B 85357 357 chr10 76554560 76557006 76555741 N NA KAT6B ADK,KAT6B,DUSP13,DUPD1 IMR90 Hi-C 24141950 KAT6B 29165 358 chr10 77369961 77375399 77371118 N NA NA KCNMA1,C10orf11 IMR90 Hi-C 24141950 ZNF503 208448 359 chr10 80061652 80063288 80062921 N NA NA ZMIZ1,RPS24,LOC283050,LOC100132987,POLR3A IMR90 Hi-C 24141950 RPS24 268134 360 chr10 81430059 81440073 81435506,81432145 N,N NA;NA NA NA NA NA NA LOC642361 145585 361 chr10 82006237 82007545 82006359 N NA ANXA11 NA NA NA NA ANXA11 40909 362 chr10 88158234 88167880 88160718 Y OPN4,GRID1 NA WAPAL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 WAPAL 113661 363 chr10 88169870 88173407 88172201,88171415 N,Y NA;NA NA NA NA NA NA WAPAL 108134 364 chr10 89381018 89383186 89382253 N NA NA RNLS,MINPP1,PAPSS2 IMR90 Hi-C 24141950 MINPP1 116795 365 chr10 89786612 89789028 89788046,89787595 N,N NA;NA NA RNLS,PTEN IMR90 Hi-C 24141950 PTEN 163417 366 chr10 89820984 89836941 89825830,89831922,89822733,89835886 N,N,N,N NA;NA;NA;NA NA RNLS,KLLN,PTEN IMR90 Hi-C 24141950 PTEN 197789 367 chr10 89840221 89844255 89841371 N NA NA PTEN,RNLS,KLLN IMR90 Hi-C 24141950 PTEN 217026 368 chr10 89848548 89856221 89852646 N NA NA PTEN,RNLS,CFL1P1,KLLN IMR90 Hi-C 24141950 PTEN 225353 369 chr10 89861648 89884525 89864461,89868011,89870440,89875144,89878503,89880124 N,N,N,N,N,N NA;NA;NA;NA;NA;NA NA PTEN,KLLN,RNLS,CFL1P1,ATAD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTEN 238453 370 chr10 89976187 89978774 89976900 N NA NA PTEN,KLLN,RNLS IMR90 Hi-C 24141950 PTEN 352992 371 chr10 92736226 92739273 92737183 N NA NA PCGF5,ANKRD1 IMR90 Hi-C 24141950 RPP30 104517 372 chr10 92752371 92772038 92759196,92765591,92753783,92769654 Y,N,N,N NA;NA;NA;NA NA ANKRD1,PCGF5,RPP30 IMR90 Hi-C 24141950 RPP30 120662 373 chr10 94515386 94518225 94516780 N NA NA EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 65705 374 chr10 96942169 96945571 96943578 Y SORBS1,SORBS1 NA SORBS1,C10orf129 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PDLIM1 105210 375 chr10 970995 984098 976216,977819 Y,N NA;NA LARP4B LARP4B,DIP2C,GTPBP4,IDI1,IDI2-AS1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LARP4B 39293 376 chr10 98499864 98509782 98507950,98500964 Y,N LCOR,PIK3AP1;NA PIK3AP1 PIK3AP1,SLIT1,TLL2 IMR90 Hi-C 24141950 PIK3AP1 19585 377 chr10 988617 992065 989764 N NA GTPBP4 LARP4B,DIP2C,GTPBP4,IDI2-AS1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GTPBP4 42284 378 chr10 99166341 99168399 99167340 N NA RRP12,PGAM1,EXOSC1,ZDHHC16 EXOSC1,ZDHHC16,PGAM1,RRP12 MCF7,K562 ChIA-PET 22265404 RRP12 5214 379 chr10 99170970 99174744 99172871 Y C10orf12,ZFYVE27,ZFYVE27,FRAT2 RRP12,PGAM1,EXOSC1,ZDHHC16 PGAM1,RRP12,ZDHHC16,EXOSC1 MCF7,K562 ChIA-PET 22265404 RRP12 9843 380 chr11 102149841 102151582 102150676 N NA BIRC3 YAP1,BIRC2,MMP20,BIRC3,C11orf70,TMEM123,MMP7 IMR90 Hi-C 24141950 BIRC3 36599 381 chr11 102346868 102348434 102347720 N NA TMEM123 TMEM123,MMP20,BIRC2,BIRC3,MMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM123 23093 382 chr11 102420607 102426535 102423745 N NA MMP7 BIRC2,TMEM123,MMP7,MMP20 IMR90 Hi-C 24141950 MMP7 19129 383 chr11 107639894 107641445 107640437 N NA NA NA NA NA NA SLC35F2 88469 384 chr11 108490485 108493738 108492839,108491899 N,N NA;NA EXPH5,DDX10 NPAT,ATM,EXPH5 IMR90 Hi-C 24141950 EXPH5 26111 385 chr11 109815543 109818871 109817114 N NA NA DDX10,ZC3H12C,FDX1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZC3H12C 145216 386 chr11 109824944 109834912 109825144,109827360,109830690 N,N,N NA;NA;NA NA DDX10,ZC3H12C,FDX1 IMR90 Hi-C 24141950 ZC3H12C 129175 387 chr11 109840274 109846880 109842394 N NA NA NA NA NA NA ZC3H12C 117207 388 chr11 109869162 109872811 109870961 Y FDX1,ZC3H12C NA ZC3H12C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZC3H12C 91276 389 chr11 109891163 109902926 109893489,109899662 N,N NA;NA NA ZC3H12C K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZC3H12C 61161 390 chr11 109946532 109949693 109948043 N NA ZC3H12C ZC3H12C MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZC3H12C 14394 391 chr11 110209086 110217212 110210261 N NA RDX C11orf53,RDX IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RDX 41649 392 chr11 110218741 110229297 110219804 N NA NA C11orf53,RDX IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RDX 51304 393 chr11 110241554 110246886 110243939 N NA NA RDX,FDX1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FDX1 53775 394 chr11 111046470 111049626 111047962 N NA NA ARHGAP20,FDX1,C11orf53 IMR90 Hi-C 24141950 C11orf92 120913 395 chr11 112150492 112153848 112151414 N NA NA BCO2,PTS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTS 53404 396 chr11 115740693 115745988 115743321 N NA NA CADM1 IMR90 Hi-C 24141950 CADM1 365452 397 chr11 115787906 115802776 115790324,115798341,115801918 N,N,Y NA;NA;NA NA CADM1,LOC283143 IMR90 Hi-C 24141950 CADM1 412665 398 chr11 115845219 115847305 115846277 N NA NA CADM1 IMR90 Hi-C 24141950 CADM1 469978 399 chr11 115942816 115947192 115945079 N NA NA CADM1 IMR90 Hi-C 24141950 CADM1 567575 400 chr11 117814700 117816555 117815519 Y IL10RA IL10RA DSCAML1,TMPRSS13,TMPRSS4,LOC100526771,FXYD6-FXYD2 IMR90 Hi-C 24141950 IL10RA 40551 401 chr11 118689538 118695820 118691019,118693806 N,N NA;NA DDX6 DDX6,PHLDB1,UPK2,TREH,CXCR5,BCL9L,MIR4492,FOXR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DDX6 27566 402 chr11 118710661 118713300 118712234 N NA DDX6,CXCR5 DDX6,UPK2,FOXR1,BCL9L,MIR4492,RPS25,SLC37A4,TRAPPC4,CXCR5,CCDC84,RPL23AP64 IMR90 Hi-C 24141950 CXCR5 41175 403 chr11 119621682 119683608 119623002 N NA PVRL1 PVRL1,TRIM29,LOC100499227,GRIK4 IMR90 Hi-C 24141950 PVRL1 22247 404 chr11 120434215 120439320 120435257 N NA NA GRIK4,ARHGEF12 IMR90 Hi-C 24141950 ARHGEF12 226597 405 chr11 120482491 120487957 120484039 N NA NA GRIK4 IMR90 Hi-C 24141950 ARHGEF12 274873 406 chr11 121105558 121111179 121107992 N NA NA SORL1 IMR90 Hi-C 24141950 SC5DL 52209 407 chr11 121236352 121240689 121238379 N NA NA SORL1,SC5DL IMR90 Hi-C 24141950 SC5DL 72964 408 chr11 121241509 121245192 121243980 N NA NA SORL1 IMR90 Hi-C 24141950 SORL1 77720 409 chr11 123133729 123136877 123134915 N NA NA CLMP,CRTAM,HSPA8,GRAMD1B IMR90 Hi-C 24141950 HSPA8 200828 410 chr11 123171687 123182645 123173389 N NA NA CLMP IMR90 Hi-C 24141950 GRAMD1B 213883 411 chr11 123945981 123947953 123947144 N NA NA VWA5A,OR8G1,OR8D2 IMR90 Hi-C 24141950 ZNF202 333618 412 chr11 124587231 124588997 124587860 N NA SIAE,NRGN,VSIG2,ESAM NA NA NA NA NRGN 20832 413 chr11 128158379 128167701 128161156 N NA NA ETS1,FLI1,LOC100507392,KCNJ1 IMR90 Hi-C 24141950 FLI1 396110 414 chr11 128168534 128170565 128169159 Y NA NA ETS1,FLI1,KCNJ1 IMR90 Hi-C 24141950 FLI1 393246 415 chr11 128477904 128482478 128480980 Y ETS1,FLI1,FLI1 NA ETS1 IMR90 Hi-C 24141950 FLI1 81333 416 chr11 128493731 128501947 128494916,128498506 N,N NA;NA NA ETS1,FLI1,KCNJ1 IMR90 Hi-C 24141950 FLI1 61864 417 chr11 130962014 130976581 130974938 N NA NA NTM IMR90 Hi-C 24141950 SNX19 175632 418 chr11 131044582 131075631 131056666,131059225 N,N NA;NA NA NTM IMR90 Hi-C 24141950 SNX19 258200 419 chr11 134844638 134846887 134845293 N NA NA NA NA NA NA ACAD8 721204 420 chr11 1403329 1406124 1404628 Y DUSP8,BRSK2 NA TOLLIP,LOC255512,MUC5B,BRSK2,MOB2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOLLIP 72437 421 chr11 17228328 17231501 17229570 N NA PIK3C2A NA NA NA NA PIK3C2A 36974 422 chr11 1850786 1853185 1852081 N NA LSP1 NA NA NA NA LSP1 21015 423 chr11 32843011 32845085 32843808 N NA PRRG4 NA NA NA NA PRRG4 6396 424 chr11 33396732 33400175 33397790 N NA NA NA NA NA NA HIPK3 117564 425 chr11 33408106 33417026 33411497 N NA NA C11orf41,C11orf91,CD59,FBXO3 IMR90 Hi-C 24141950 HIPK3 128938 426 chr11 33933479 33937540 33934209 N NA LMO2 LMO2 IMR90 Hi-C 24141950 LMO2 19643 427 chr11 33959883 33962793 33961924 N NA LMO2 LMO2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LMO2 46047 428 chr11 349364 352817 350882 Y NA IFITM2,IFITM1,IFITM3 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFITM3 28450 429 chr11 35056180 35063389 35058114,35062066 N,Y NA;CD44 NA CD44,SLC1A2,PDHX IMR90 Hi-C 24141950 CD44 97028 430 chr11 35069393 35073119 35071842 N NA NA CD44,PDHX,SLC1A2 IMR90 Hi-C 24141950 CD44 87298 431 chr11 35083621 35085870 35084965 N NA NA CD44,PDHX IMR90 Hi-C 24141950 CD44 74547 432 chr11 35102908 35107253 35104688 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 53164 433 chr11 35108147 35115719 35110385 N NA CD44 CD44,PDHX,SLC1A2 IMR90 Hi-C 24141950 CD44 44698 434 chr11 35146328 35154241 35148265 N NA CD44 PDHX,APIP,CD44,SLC1A2 IMR90 Hi-C 24141950 CD44 6176 435 chr11 354394 357292 355823 N NA IFITM2,IFITM1,IFITM3 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFITM3 33480 436 chr11 43165887 43168825 43167353 Y NA NA NA NA NA NA API5 164680 437 chr11 43664709 43673841 43665763 N NA HSD17B12 HSD17B12 IMR90 Hi-C 24141950 HSD17B12 28302 438 chr11 44580030 44583360 44581334 Y CD82 CD82 EXT2,ALX4,CD82,TSPAN18,TP53I11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD82 3781 439 chr11 46263740 46266208 46265028 Y NA CREB3L1 DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB3L1 33020 440 chr11 58863530 58870839 58865663,58869916 N,N NA;NA FAM111B,FAM111A FAM111B IMR90 Hi-C 24141950 FAM111B 3819 441 chr11 59049928 59053731 59051502 N NA NA NA NA NA NA MPEG1 69434 442 chr11 59318954 59320200 59319742 N NA NA PATL1,OSBP K562 ChIA-PET 22265404 OSBP 63417 443 chr11 60825913 60840610 60839221 N NA NA CD6,CD5,VPS37C IMR90 Hi-C 24141950 VPS37C 88306 444 chr11 60854154 60862646 60859401 N NA NA VPS37C,CD5,CD6 IMR90 Hi-C 24141950 VPS37C 66270 445 chr11 61879069 61880952 61880119 Y FADS2,FADS3,RAB3IL1 INCENP FEN1,C11orf10,FADS3,BEST1,RAB3IL1,FADS2,DKFZP434K028,C11orf9,FADS1,FTH1,INCENP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 INCENP 10493 446 chr11 63945090 63951567 63949260 Y NA STIP1,FERMT3,TRPT1,NUDT22,DNAJC4 MACROD1 K562 ChIA-PET 22265404 STIP1 2020 447 chr11 64215366 64217095 64216154 N NA NA SLC22A12,NRXN2,SLC22A11,RASGRP2,PYGM IMR90,K562,HELA Hi-C,5C 24141950,22955621 RPS6KA4 88741 448 chr11 64916787 64920949 64918329,64919913 N,N NA;NA TM7SF2,ZNHIT2,MRPL49,FAU,SYVN1,CAPN1 SYVN1,CAPN1,SPDYC,GPHA2,C11orf85,SAC3D1,NAALADL1,ARL2-SNX15,ZFPL1,CDCA5,FAU,C11orf2,ZNHIT2,MRPL49,TM7SF2,SLC22A20,POLA2,CDC42EP2,DPF2,TIGD3,SLC25A45 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SYVN1 14784 449 chr11 65241592 65246735 65245039 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 MALAT1,SCYL1 SCYL1,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 18498 450 chr11 65252954 65257659 65255618 N NA MALAT1,SCYL1 MALAT1,FRMD8,NEAT1,MIR612,POLA2,DPF2,SLC25A45,TIGD3,SCYL1 IMR90 Hi-C 24141950 MALAT1 7574 451 chr11 66866233 66869487 66867778 N NA KDM2A RBM4B,PC,RHOD,SYT12,KDM2A,SPTBN2,ADRBK1,SSH3,LOC100130987 IMR90 Hi-C 24141950 KDM2A 17253 452 chr11 68048227 68055367 68049807 Y NA C11orf24,LRP5 NDUFS8,TCIRG1,CHKA,SUV420H1,C11orf24,LRP5,PPP6R3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C11orf24 8758 453 chr11 68922307 68943827 68924194,68934174 N,N NA;NA NA ORAOV1,CCND1,FGF19,MYEOV,TPCN2 IMR90 Hi-C 24141950 TPCN2 105957 454 chr11 68976256 68978897 68977929 N NA NA ORAOV1,MYEOV,CCND1,FGF19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPCN2 159906 455 chr11 69043282 69046313 69044741 N NA NA MYEOV,CCND1,ORAOV1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 TPCN2 226932 456 chr11 69195916 69199870 69197253 Y ORAOV1,MYEOV NA MYEOV,TPCN2,CCND1,ORAOV1 IMR90 Hi-C 24141950 CCND1 256003 457 chr11 69256454 69259432 69258292 Y CCND1 NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CCND1 196441 458 chr11 72862392 72890029 72864757,72868242 N,N NA;NA FCHSD2 STARD10,FCHSD2,ATG16L2,ARAP1,MIR4692,P2RY2,P2RY6,ARHGEF17 IMR90 Hi-C 24141950 FCHSD2 9249 459 chr11 72899265 72902598 72900597 N NA FCHSD2 FCHSD2,ATG16L2,ARHGEF17,P2RY2,P2RY6,ARAP1,STARD10,MIR4692 IMR90,MCF7 Hi-C,3C,ChIA-PET 24141950,19890323,22265404 FCHSD2 46122 460 chr11 73489369 73492120 73490615 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 6797 461 chr11 74759603 74763459 74760563 N NA NA SLCO2B1,SPCS2,XRRA1,OR2AT4 IMR90 Hi-C 24141950 NEU3 59653 462 chr11 74810809 74812840 74811525 N NA NA XRRA1,LOC100507050,OR2AT4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NEU3 110859 463 chr11 75945772 75947717 75946754 N NA NA C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 144163 464 chr11 76339308 76341901 76340634 N NA LRRC32 NA NA NA NA LRRC32 39890 465 chr11 80526168 80528780 80528225 N NA NA NA NA NA NA C11orf82 2083957 466 chr11 85826456 85828794 85827495 N NA PICALM PICALM,C11orf73,CCDC83,EED IMR90 Hi-C 24141950 PICALM 45533 467 chr11 85911936 85915390 85913052 N NA EED PICALM,CCDC83,EED IMR90 Hi-C 24141950 EED 40416 468 chr11 85924383 85928328 85925944 N NA EED PICALM,CCDC83,EED IMR90 Hi-C 24141950 EED 27478 469 chr11 85931263 85932552 85931858 N NA EED PICALM,CCDC83,EED,SYTL2 IMR90 Hi-C 24141950 EED 23254 470 chr11 88090837 88110846 88092827 N NA CTSC CTSC,GRM5 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CTSC 19896 471 chr11 88153686 88156682 88154879 Y NA NA GRM5 IMR90 Hi-C 24141950 CTSC 82745 472 chr11 9383996 9387490 9386112 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 18679 473 chr11 94004443 94007273 94006246 N NA NA HEPHL1 IMR90 Hi-C 24141950 PANX1 142349 474 chr11 94981538 94984398 94982262 N NA SESN3 SESN3 IMR90 Hi-C 24141950 SESN3 17292 475 chr11 94985540 94988499 94987686 Y NA SESN3 NA NA NA NA SESN3 21294 476 chr11 95069725 95071976 95070915 N NA NA SESN3 IMR90 Hi-C 24141950 SESN3 105479 477 chr11 95287881 95291325 95289770 N NA NA SESN3 IMR90 Hi-C 24141950 FAM76B 231629 478 chr11 95432190 95435208 95433531 N NA NA SESN3,SRSF8,ENDOD1 IMR90 Hi-C 24141950 FAM76B 87746 479 chr11 95443161 95445923 95444834 N NA NA SESN3,SRSF8,ENDOD1 IMR90 Hi-C 24141950 FAM76B 77031 480 chr11 95447121 95450458 95449208 Y FAM76B NA SESN3,ENDOD1 IMR90 Hi-C 24141950 FAM76B 72496 481 chr11 9585734 9589003 9587473 N NA WEE1 ZNF143,LOC644656 MCF7,K562 ChIA-PET 22265404 WEE1 6225 482 chr11 9633754 9639663 9635340,9634810 N,N NA;NA WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 38526 483 chr11 9650098 9651352 9650857 N NA SWAP70 SBF2,SWAP70,WEE1,ADM IMR90 Hi-C 24141950 SWAP70 34276 484 chr12 102247435 102255323 102249765,102252243 N,Y NA;DRAM1 GNPTAB,DRAM1 GNPTAB,DRAM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DRAM1 15782 485 chr12 102876632 102881423 102878065 N NA NA NA NA NA NA PARPBP 362676 486 chr12 102906166 102908071 102906859 N NA NA IGF1 IMR90 Hi-C 24141950 PARPBP 392210 487 chr12 103121230 103124009 103122717 N NA NA IGF1 IMR90 Hi-C 24141950 ASCL1 227443 488 chr12 103494879 103497793 103496375 N NA NA NA NA NA NA ASCL1 143427 489 chr12 103922845 103925069 103924146 N NA NA ASCL1,PAH IMR90 Hi-C 24141950 NT5DC3 309906 490 chr12 103968730 103970091 103969455 N NA NA NA NA NA NA NT5DC3 264884 491 chr12 10401540 10404510 10402871 N NA GABARAPL1 NA NA NA NA GABARAPL1 36051 492 chr12 10695294 10700745 10696272 N NA NA CLEC1A,KLRC4-KLRK1,KLRK1 IMR90 Hi-C 24141950 KLRAP1 51689 493 chr12 10709156 10714614 10710348 N NA KLRAP1 CLEC1A,KLRC4-KLRK1,C12orf59,GABARAPL1,KLRD1 IMR90 Hi-C 24141950 KLRAP1 37820 494 chr12 110325555 110328645 110326598 N NA GLTP,TCHP GLTP,TCHP MCF7,K562 ChIA-PET 22265404 GLTP 7262 495 chr12 110516488 110519489 110517780 Y GIT2,RAD9B,C12orf76 C12orf76,IFT81 C12orf76 K562 ChIA-PET 22265404 C12orf76 10988 496 chr12 111027424 111031037 111028824 Y ARPC3,PPTC7,HVCN1 PPTC7,TCTN1 GPN3,FAM216A,RAD9B,VPS29,PPTC7,TCTN1,PPP1CC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPTC7 6360 497 chr12 111041608 111045521 111043701 Y ARPC3,PPTC7,HVCN1,HVCN1 PPTC7,TCTN1 GPN3,FAM216A,RAD9B,PPTC7,C12orf76,TCTN1,ARPC3,VPS29,HVCN1,PPP1CC IMR90 Hi-C 24141950 TCTN1 6311 498 chr12 111213190 111215993 111214483 N NA PPP1CC PPP1CC K562 ChIA-PET 22265404 PPP1CC 32407 499 chr12 112553477 112555700 112554504 Y ALDH2,TRAFD1 NAA25,TRAFD1 TRAFD1,NAA25 MCF7,K562 ChIA-PET 22265404 NAA25 6842 500 chr12 115791526 115793142 115792304 N NA NA TBX3 IMR90 Hi-C 24141950 MED13L 921849 501 chr12 115811691 115814540 115812955 N NA NA TBX3 IMR90 Hi-C 24141950 MED13L 900451 502 chr12 117109714 117113867 117111219 N NA NA MED13L,C12orf49 IMR90 Hi-C 24141950 C12orf49 61976 503 chr12 119119899 119121177 119120644 N NA NA SRRM4 IMR90 Hi-C 24141950 SUDS3 305541 504 chr12 120728252 120731142 120730472 N NA PXN,SIRT4 PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SIRT4 8982 505 chr12 12132563 12136469 12134532 N NA NA ETV6,GPR19,LOC338817 IMR90 Hi-C 24141950 BCL2L14 87409 506 chr12 121496161 121499440 121498071 Y P2RX4,CAMKK2,P2RX7,OASL C12orf43,OASL SPPL3,UNC119B,ACADS,C12orf43,HNF1A,OASL,LOC100506668,DYNLL1,MLEC,P2RX7,P2RX4,CAMKK2,RNF10,POP5,CABP1,HNF1A-AS1 IMR90 Hi-C 24141950 OASL 19381 507 chr12 121565437 121568476 121566888 N NA P2RX7 P2RX4,P2RX7 MCF7,K562 ChIA-PET 22265404 P2RX7 2146 508 chr12 12159897 12167186 12162433 Y ETV6,LOH12CR1,BCL2L14 NA ETV6,LOC338817,CDKN1B IMR90 Hi-C 24141950 BCL2L14 56692 509 chr12 12175717 12180247 12178219 N NA BCL2L14 ETV6,LOC338817,CDKN1B IMR90 Hi-C 24141950 BCL2L14 43631 510 chr12 12184287 12188874 12185419 N NA BCL2L14 ETV6,LOC338817,CDKN1B,BCL2L14,MANSC1,LOH12CR2,LOH12CR1,GPR19 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCL2L14 35004 511 chr12 122026624 122048350 122028628 Y RNF34,KDM2B,SETD1B,RHOF,ORAI1 KDM2B,ORAI1 KDM2B,ANAPC5,CAMKK2,ORAI1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KDM2B 7704 512 chr12 123848159 123853533 123850091 N NA SBNO1,SETD8 SBNO1,RILPL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SBNO1 13171 513 chr12 125196758 125199639 125198380 Y NCOR2,UBC NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 NCOR2 144748 514 chr12 125352405 125354909 125353421 N NA SCARB1,UBC NA NA NA NA SCARB1 3886 515 chr12 125368867 125370554 125369852 N NA SCARB1,UBC UBC K562 ChIA-PET 22265404 SCARB1 20348 516 chr12 125531969 125535630 125534269 Y NA AACS AACS K562,MCF7 ChIA-PET 22265404 AACS 14295 517 chr12 12734037 12737640 12735383 N NA DUSP16,CREBL2 LOH12CR1,LOH12CR2,DUSP16,GPR19,CDKN1B,CREBL2,APOLD1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP16 18589 518 chr12 127525810 127527712 127526799 N NA NA NA NA NA NA SLC15A4 1780829 519 chr12 127609457 127612063 127610386 N NA NA NA NA NA NA SLC15A4 1696478 520 chr12 131186749 131202302 131200015 N NA NA NA NA NA NA STX2 121517 521 chr12 131995845 131997168 131996025 N NA NA RIMBP2 IMR90 Hi-C 24141950 SFSWAP 198467 522 chr12 132087249 132089667 132088636 N NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 105968 523 chr12 132091824 132093542 132092282 N NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 102093 524 chr12 133045328 133046207 133045768 N NA FBRSL1 LOC100507055,FBRSL1 IMR90 Hi-C 24141950 FBRSL1 20950 525 chr12 14391365 14396917 14393242 N NA NA ATF7IP,GUCY2C,PLBD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATF7IP 121694 526 chr12 14434984 14439043 14437030 N NA NA NA NA NA NA ATF7IP 79568 527 chr12 16672208 16675986 16673806 N NA NA NA NA NA NA LMO3 85162 528 chr12 16981380 16996084 16985951 N NA NA NA NA NA NA SKP1P2 145597 529 chr12 17009106 17012270 17011539 N NA NA NA NA NA NA SKP1P2 129411 530 chr12 1709561 1713697 1710864 N NA FBXL14,WNT5B FBXL14,RAD52,ERC1,WNT5B,WNK1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FBXL14 6230 531 chr12 19583896 19587840 19585048 N NA AEBP2 AEBP2 IMR90 Hi-C 24141950 AEBP2 4768 532 chr12 25155921 25161438 25157661 N NA C12orf77,LRMP C12orf77,BCAT1,LRMP,CASC1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 C12orf77 5548 533 chr12 25177556 25181353 25178428 N NA C12orf77,LRMP CASC1 IMR90 Hi-C 24141950 LRMP 23828 534 chr12 25536782 25540729 25539226 Y NA NA BCAT1,CASC1,KRAS,LYRM5,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 132928 535 chr12 26308207 26310923 26309606 N NA NA ITPR2,BHLHE41,SSPN IMR90 Hi-C 24141950 ITPR2 675208 536 chr12 26424137 26425779 26424930 N NA NA SSPN,BHLHE41,ITPR2 IMR90 Hi-C 24141950 ITPR2 560352 537 chr12 26426340 26428664 26427806 Y NA NA SSPN,BHLHE41,ITPR2 IMR90 Hi-C 24141950 ITPR2 557467 538 chr12 26998611 27001463 26999237 N NA ITPR2 RASSF8,BHLHE41,ITPR2,ASUN,STK38L,SSPN,TM7SF3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITPR2 12480 539 chr12 27021257 27027352 27024086 N NA ITPR2 TM7SF3,ITPR2,ASUN IMR90 Hi-C 24141950 ITPR2 35126 540 chr12 27330507 27340873 27332468,27338481 N,N NA;NA NA STK38L,MED21,TM7SF3,REP15,PPFIBP1,C12orf71 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STK38L 56205 541 chr12 27350732 27353722 27352707 N NA STK38L STK38L,REP15,PPFIBP1,C12orf71 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STK38L 43356 542 chr12 27356897 27363380 27360895 N NA STK38L STK38L IMR90 Hi-C 24141950 STK38L 33698 543 chr12 27371216 27378470 27375326,27372541 N,N NA;NA STK38L STK38L,ARNTL2,PPFIBP1,REP15,MED21 IMR90 Hi-C 24141950 STK38L 18608 544 chr12 27389437 27393067 27391331,27389628 Y,N ITPR2,STK38L;NA STK38L FGFR1OP2,TM7SF3,MED21,C12orf71,STK38L IMR90 Hi-C 24141950 STK38L 4011 545 chr12 28339110 28345738 28343348 N NA NA KLHDC5,CCDC91 IMR90 Hi-C 24141950 KLHDC5 405923 546 chr12 29300648 29304393 29302261 N NA NA NA NA NA NA ERGIC2 229750 547 chr12 31768368 31770065 31769363 N NA DENND5B,METTL20 DENND5B IMR90 Hi-C 24141950 DENND5B 24416 548 chr12 31787863 31792582 31789118 N NA DENND5B,METTL20 DENND5B,METTL20 IMR90 Hi-C 24141950 METTL20 7512 549 chr12 31898795 31901914 31899946 Y AMN1,H3F3C AMN1 METTL20,AMN1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AMN1 16687 550 chr12 31962924 31966108 31964400 N NA NA NA NA NA NA AMN1 80816 551 chr12 32026473 32030353 32028476 N NA NA NA NA NA NA C12orf35 82000 552 chr12 32047288 32052656 32049337 N NA NA AMN1 IMR90 Hi-C 24141950 C12orf35 59697 553 chr12 34361663 34362129 34361968 N NA NA NA NA NA NA ALG10 186447 554 chr12 38493140 38494598 38493580 N NA NA NA NA NA NA ALG10B 215959 555 chr12 40953552 40956627 40955007 N NA NA NA NA NA NA ABCD2 939709 556 chr12 4220097 4229230 4227876,4221676 N,N NA;NA NA CCND2 IMR90 Hi-C 24141950 CCND2 153672 557 chr12 4248479 4264699 4252216,4255651,4262823 Y,Y,Y EFCAB4B,PARP11,CCND2,C12orf4;CCND2;EFCAB4B,PARP11,C12orf4 NA CCND2 IMR90 Hi-C 24141950 CCND2 118203 558 chr12 4272440 4275587 4274208 Y CCND2 NA NA NA NA NA CCND2 107315 559 chr12 4323253 4326369 4324885 N NA NA CCND2 IMR90 Hi-C 24141950 CCND2 56533 560 chr12 46775331 46783468 46777272,46781937 N,N NA;NA SLC38A2 SLC38A1 K562,MCF7 ChIA-PET 22265404 SLC38A2 8686 561 chr12 49625459 49629895 49628421 Y LMBR1L,TUBA1A TUBA1A,TUBA1C RHEBL1,DHH,LMBR1L,TUBA1A,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 28970 562 chr12 5051753 5054284 5052653 N NA KCNA1 KCNA1 IMR90 Hi-C 24141950 KCNA1 32680 563 chr12 52506468 52514648 52512839 N NA C12orf44 ACVR1B,NR4A1,GRASP,KRT8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C12orf44 42710 564 chr12 53266777 53268648 53267824 Y PFDN5 NA KRT18,KRT8,LOC283403,KRT80,EIF4B,LOC283404 MCF7 ChIA-PET 22265404 EIF4B 131414 565 chr12 53758867 53767598 53760053,53765115 N,Y NA;CSAD,ITGB7,PFDN5,SP1,SP1,PRR13 AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 6381 566 chr12 54144141 54156351 54151042,54145528 Y,N NA;NA CALCOCO1 ATF7,ATP5G2,CALCOCO1,CBX5,HOXC8,MIR196A2,HOXC9,SMUG1,HNRNPA1,HOXC10,HOXC11,HOXC13,HOTAIR IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CALCOCO1 22834 567 chr12 55383171 55389398 55385416 N NA KIAA0748 KIAA0748 IMR90 Hi-C 24141950 KIAA0748 4715 568 chr12 57817700 57826420 57824694 N NA INHBE,ARHGAP9 R3HDM2,SHMT2,NDUFA4L2,STAC3,INHBE,GLI1,INHBC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 INHBE 22676 569 chr12 58291495 58293511 58293207 N NA LOC100506844,XRCC6BP1 CTDSP2,METTL1,CYP27B1,METTL21B,AVIL,TSFM,TSPAN31,CDK4,MARCH9,AGAP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506844 36436 570 chr12 59988632 60000132 59990652 N NA NA NA NA NA NA LRIG3 674370 571 chr12 6275694 6278022 6276604 Y VAMP1,TNFRSF1A NA VWF,CD9,PLEKHG6 IMR90 Hi-C 24141950 PLEKHG6 141580 572 chr12 6386760 6388805 6387714 N NA PLEKHG6 VWF,PLEKHG6,CD9,TNFRSF1A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLEKHG6 30797 573 chr12 65549387 65551410 65550354 N NA LEMD3 LEMD3 MCF7 ChIA-PET 22265404 LEMD3 11941 574 chr12 66448645 66452757 66449943 N NA NA HMGA2,MSRB3,RPSAP52 IMR90 Hi-C 24141950 LLPH 71776 575 chr12 66464536 66468060 66466261 N NA NA HMGA2,MSRB3,RPSAP52 IMR90 Hi-C 24141950 LLPH 56473 576 chr12 68383241 68386460 68385071,68385078 N,N NA;NA NA NA NA NA NA MDM1 339701 577 chr12 68435094 68439660 68436187 N NA NA NA NA NA NA MDM1 286501 578 chr12 68756982 68760336 68759099 Y IFNG,RAP1B MDM1 RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MDM1 30821 579 chr12 68806753 68838032 68836436 N NA NA RAP1B,SNORA70G IMR90 Hi-C 24141950 MDM1 80592 580 chr12 68839617 68846638 68841315,68845280 N,N NA;NA NA SNORA70G,RAP1B,LOC100507250,NUP107 IMR90 Hi-C 24141950 MDM1 113456 581 chr12 68873906 68878097 68875883 N NA NA LOC100507250 IMR90 Hi-C 24141950 RAP1B 126522 582 chr12 68889378 68893108 68891423 N NA NA RAP1B,IL26,NUP107 IMR90 Hi-C 24141950 RAP1B 111511 583 chr12 69550415 69551865 69551007 N NA NA CPM,CPSF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CPSF6 81452 584 chr12 69723200 69725725 69724405 N NA YEATS4 CPSF6,YEATS4 K562 ChIA-PET 22265404 YEATS4 27807 585 chr12 73216987 73218824 73218060 N NA NA NA NA NA NA TBC1D15 983500 586 chr12 76370928 76373182 76371900 Y NA NA OSBPL8,PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 52374 587 chr12 76552201 76553708 76552708 Y PHLDA1,OSBPL8 NA NAP1L1,PHLDA1,OSBPL8,BBS10 IMR90 Hi-C 24141950 NAP1L1 73463 588 chr12 81096095 81097918 81096920 Y MYF5 NA NA NA NA NA PPP1R12A 766860 589 chr12 8111249 8125775 8113465,8123519,8125141 N,Y,N NA;CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3;NA SLC2A3 SLC2A3,FOXJ2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC2A3 22357 590 chr12 8177788 8180858 8179319 Y NA FOXJ2 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 4501 591 chr12 827010 833334 828728,831757 N,Y NA;NA WNK1 NINJ2,WNK1,B4GALNT3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 WNK1 28755 592 chr12 90255705 90258925 90257079 N NA NA LOC338758 IMR90 Hi-C 24141950 LOC338758 152973 593 chr12 90273452 90276963 90274713,90276000 Y,N POC1B,ATP2B1;NA NA LOC338758 IMR90 Hi-C 24141950 LOC338758 170720 594 chr12 90320193 90323917 90321799 N NA NA NA NA NA NA LOC338758 217461 595 chr12 90352497 90357012 90353826 N NA NA ATP2B1,LOC338758,C12orf37 IMR90 Hi-C 24141950 LOC338758 249765 596 chr12 92171840 92173950 92172844 Y BTG1 NA LOC256021 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC256021 362497 597 chr12 92564084 92572358 92566732 N NA LOC256021 LOC256021 K562 ChIA-PET 22265404 LOC256021 27637 598 chr12 92576880 92582334 92579801 N NA LOC256021 NA NA NA NA LOC256021 40433 599 chr12 92731325 92735993 92734907 N NA NA NA NA NA NA CLLU1OS 85931 600 chr12 92755301 92760399 92756537 N NA NA NA NA NA NA CLLU1OS 61525 601 chr12 92854414 92889304 92864361,92861207,92887575,92866822,92880522,92855839 Y,N,N,N,N,N BTG1,C12orf74,CLLU1OS;NA;NA;NA;NA;NA CLLU1OS NA NA NA NA CLLU1OS 32490 602 chr12 92893139 92902038 92894852,92898144 N,N NA;NA NA LOC256021 MCF7 ChIA-PET 22265404 CLLU1OS 71215 603 chr12 92923212 92925084 92923992 Y NA NA NA NA NA NA CLLU1OS 101288 604 chr12 92931180 92939731 92931287,92933862,92937978 N,N,N NA;NA;NA NA NA NA NA NA CLLU1OS 109256 605 chr12 92943798 92971318 92946598,92951628,92964078 N,Y,N NA;NA;NA NA LOC256021 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLLU1OS 121874 606 chr12 92986584 93038273 92987828 Y EEA1,BTG1 NA DCN,LOC256021,EPYC,C12orf12,KERA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLLU1OS 164660 607 chr12 93363468 93369196 93366281 N NA EEA1 NUDT4,LOC643339,PLEKHG7,EEA1,UBE2N,MRPL42 IMR90 Hi-C 24141950 EEA1 40361 608 chr12 94033556 94035420 94034545 N NA NA SOCS2,LOC144481,CRADD IMR90 Hi-C 24141950 LOC144481 68382 609 chr12 95047351 95115571 95069041,95114595 N,N NA;NA TMCC3 TMCC3,PLXNC1,CCDC41,NDUFA12 IMR90 Hi-C 24141950 TMCC3 3027 610 chr12 95121566 95214160 95212095,95163059,95209872 N,N,N NA;NA;NA NA PLXNC1,TMCC3,KRT19P2,NDUFA12 IMR90 Hi-C 24141950 TMCC3 77242 611 chr12 9512814 9519548 9517329 N NA NA NA NA NA NA LOC642846 76561 612 chr12 9916290 9919204 9917248 Y KLRB1,CLEC2D,CLEC2D,CLEC2D,OLR1,KLRF1,GABARAPL1,CLEC7A,CLEC2B,CLEC12A,CD69 CLECL1,CD69 NA NA NA NA CD69 2793 613 chr12 9966222 9967929 9966857 Y KLRB1,CD69,KLRD1,KLRD1,KLRF2,KLRF1,CLEC2B NA NA NA NA NA CD69 52725 614 chr13 100078380 100090497 100084692,100086719,100089227 N,Y,N NA;GPR183;NA MIR548AN MIR548AN,UBAC2,DOCK9,UBAC2-AS1,TM9SF2,GPR18 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MIR548AN 19826 615 chr13 103091453 103093956 103092378 N NA LOC283481 NA NA NA NA LOC283481 44525 616 chr13 103242967 103246134 103244704 N NA TPP2 BIVM-ERCC5,TPP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPP2 3152 617 chr13 103658601 103661478 103659574 N NA NA NA NA NA NA METTL21CP1 126152 618 chr13 103781716 103785671 103783076 N NA NA NA NA NA NA METTL21CP1 249267 619 chr13 105791044 105793258 105792335 N NA NA NA NA NA NA ARGLU1 1427256 620 chr13 111226119 111229199 111227964 N NA RAB20,CARKD COL4A2,RAB20,CARKD,CARS2 IMR90 Hi-C 24141950 RAB20 12048 621 chr13 111570764 111573798 111573672 N NA ANKRD10 ANKRD10 K562,MCF7 ChIA-PET 22265404 ANKRD10 3348 622 chr13 111606521 111609502 111607712 Y RAB20,ING1,ING1,ANKRD10 ANKRD10 ARHGEF7,ANKRD10 IMR90 Hi-C 24141950 ANKRD10 39105 623 chr13 20133323 20137384 20133442,20136169 N,N NA;NA NA NA NA NA NA MPHOSPH8 70404 624 chr13 20158351 20162635 20161225 N NA MPHOSPH8 NA NA NA NA MPHOSPH8 45153 625 chr13 20174740 20183902 20176010 N NA MPHOSPH8 MPHOSPH8,ZMYM5 MCF7 ChIA-PET 22265404 MPHOSPH8 23886 626 chr13 21648070 21652157 21649535 N NA LATS2 LATS2,SAP18 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LATS2 12348 627 chr13 21870083 21875302 21872655 N NA NA ZDHHC20 MCF7 ChIA-PET 22265404 SKA3 119342 628 chr13 21876331 21879393 21878343 N NA NA NA NA NA NA SKA3 125590 629 chr13 21915444 21920003 21918949 N NA NA ZDHHC20 IMR90 Hi-C 24141950 ZDHHC20 113505 630 chr13 22634894 22638274 22636048 N NA NA NA NA NA NA EFHA1 456539 631 chr13 22687853 22690911 22689164 N NA NA NA NA NA NA EFHA1 509498 632 chr13 24132851 24138012 24134732 N NA TNFRSF19 MIPEP,TNFRSF19 IMR90 Hi-C 24141950 TNFRSF19 6497 633 chr13 24536863 24539309 24538109 N NA NA SPATA13 IMR90 Hi-C 24141950 MIPEP 73276 634 chr13 24553052 24555149 24553856 N NA NA SPATA13 IMR90 Hi-C 24141950 MIPEP 89465 635 chr13 25191966 25193599 25192855 N NA NA NA NA NA NA PARP4 105018 636 chr13 25590997 25593311 25592330 N NA NA NA NA NA NA PABPC3 76965 637 chr13 25751887 25761469 25760553,25755849 N,N NA;NA NA NA NA NA NA PABPC3 81611 638 chr13 28053237 28055503 28054503 N NA MTIF3 GSX1,MTIF3,ATP5EP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MTIF3 28498 639 chr13 29213740 29217068 29216033 N NA POMP FLT1,PAN3,POMP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 POMP 16073 640 chr13 30714466 30722926 30720297,30715233 N,N NA;NA NA UBL3,KATNAL1,HMGB1,USPL1,ALOX5AP,LINC00426,TEX26-AS1 IMR90 Hi-C 24141950 KATNAL1 158658 641 chr13 30726193 30733859 30731784,30733691,30731018 N,N,N NA;NA;NA NA HMGB1,UBL3,KATNAL1,USPL1,LINC00426 IMR90 Hi-C 24141950 KATNAL1 147725 642 chr13 30967925 30970986 30969412 N NA LINC00426 LINC00426,KATNAL1,HMGB1,USPL1,UBL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00426 19889 643 chr13 30981776 30984327 30982682 Y NA LINC00426 KATNAL1,LINC00426,USPL1,UBL3,HMGB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00426 33740 644 chr13 34301505 34305185 34302931 N NA NA NA NA NA NA STARD13 50573 645 chr13 34317039 34321095 34318268,34320631 N,N NA;NA NA NA NA NA NA STARD13 66107 646 chr13 34360680 34362382 34361496 N NA RFC3 NBEA IMR90 Hi-C 24141950 RFC3 29824 647 chr13 41090643 41093728 41092388 N NA NA FOXO1,TTL IMR90 Hi-C 24141950 FOXO1 147006 648 chr13 42065750 42068818 42066967 N NA C13orf15 NAA16,C13orf15,KIAA0564,DGKH,OR7E37P IMR90 Hi-C 24141950 C13orf15 34208 649 chr13 42074251 42076566 42074772 N NA C13orf15 DGKH,KIAA0564,C13orf15,OR7E37P IMR90 Hi-C 24141950 C13orf15 42709 650 chr13 42922597 42925888 42924222 N NA NA NA NA NA NA AKAP11 76308 651 chr13 42927622 42931828 42929034 N NA NA AKAP11 IMR90 Hi-C 24141950 AKAP11 81333 652 chr13 42950297 42957238 42953640 N NA NA NA NA NA NA AKAP11 104008 653 chr13 42965860 42999831 42966184,42970811,42975966,42980045,42986691 N,Y,N,Y,N NA;TNFSF11,TNFSF11,DGKH,AKAP11;NA;TNFSF11,TNFSF11,AKAP11;NA NA NA NA NA NA AKAP11 119571 654 chr13 43068442 43075087 43072128 N NA NA NA NA NA NA TNFSF11 61785 655 chr13 43122538 43125092 43123544 N NA TNFSF11 CCDC122,ENOX1 IMR90 Hi-C 24141950 TNFSF11 11780 656 chr13 44714698 44717194 44716303 N NA NA TSC22D1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC122 260872 657 chr13 46784373 46788519 46786020 N NA LCP1 NA NA NA NA LCP1 27914 658 chr13 47557698 47559087 47558239 N NA NA NA NA NA NA ESD 186331 659 chr13 49134538 49138897 49136501 N NA RCBTB2 RCBTB2,RB1 IMR90 Hi-C 24141950 RCBTB2 27222 660 chr13 49142531 49147697 49144697 N NA RCBTB2 RB1,LPAR6,RCBTB2,ITM2B IMR90 Hi-C 24141950 RCBTB2 35215 661 chr13 49151225 49157251 49153159 N NA RCBTB2 ITM2B,RB1 IMR90 Hi-C 24141950 RCBTB2 43909 662 chr13 49159796 49167004 49161232,49165073 N,N NA;NA NA FNDC3A IMR90 Hi-C 24141950 RCBTB2 52480 663 chr13 51085479 51087681 51086585 N NA NA DLEU2,DLEU1 IMR90 Hi-C 24141950 DLEU2 385802 664 chr13 51167876 51171162 51168679 Y RNASEH2B NA DLEU2,DLEU1,DLEU7 IMR90 Hi-C 24141950 RNASEH2B 312652 665 chr13 51465027 51469157 51467117 N NA RNASEH2B DLEU2,GUCY1B2,DLEU1 IMR90 Hi-C 24141950 RNASEH2B 14657 666 chr13 53425003 53426530 53425842 N NA NA NA NA NA NA SUGT1 198172 667 chr13 56545644 56545968 56545827 N NA NA NA NA NA NA SUGT1 3318813 668 chr13 60841462 60852441 60842061 N NA NA NA NA NA NA DIAPH3 103343 669 chr13 71863970 71866678 71865429 Y NA NA NA NA NA NA MZT1 1435260 670 chr13 77912023 77916494 77913434 N NA MYCBP2 MYCBP2 K562 ChIA-PET 22265404 MYCBP2 10846 671 chr13 77918770 77921440 77919517 Y FBXL3,MYCBP2 MYCBP2 NA NA NA NA MYCBP2 17593 672 chr13 78002030 78018965 78003752,78007170 N,N NA;NA NA NA NA NA NA MYCBP2 100853 673 chr13 78050655 78053181 78052471 N NA NA NA NA NA NA MYCBP2 149478 674 chr13 95200413 95203297 95201797 Y NA TGDS NA NA NA NA TGDS 45214 675 chr13 97778216 97779283 97778537 N NA NA MBNL2 IMR90 Hi-C 24141950 MBNL2 95291 676 chr13 97793391 97797439 97794502 N NA NA MBNL2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MBNL2 77135 677 chr14 100639172 100647435 100646548 N NA NA EVL K562 ChIA-PET 22265404 YY1 57667 678 chr14 100658053 100661053 100659395 Y NA YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 YY1 44049 679 chr14 100677038 100682733 100680968 N NA YY1 DEGS2,YY1,EVL IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YY1 22369 680 chr14 100686902 100691453 100689476 N NA YY1 YY1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 YY1 13649 681 chr14 102989763 102992818 102991546 N NA ANKRD9 ANKRD9,RCOR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD9 13635 682 chr14 103219486 103232559 103221160,103230775 Y,N NA;NA TRAF3 TECPR2,RCOR1,TRAF3,CDC42BPB,AMN,SYBU IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 TRAF3 11257 683 chr14 103784604 103786837 103785825 Y NA EIF5 RCOR1,EIF5,CDC42BPB,LOC100131366,TNFAIP2,MARK3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EIF5 13656 684 chr14 105550746 105554987 105553629 N NA GPR132 BTBD6,BRF1,AHNAK2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GPR132 18992 685 chr14 105557200 105563972 105559650 N NA GPR132 BTBD6,BRF1,JAG2,NUDT14 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR132 25446 686 chr14 106021117 106036419 106024073,106027762,106033568 N,N,N NA;NA;NA NA NA NA NA NA C14orf80 64925 687 chr14 106037863 106051054 106043025,106038114,106049180 N,N,N NA;NA;NA NA NA NA NA NA C14orf80 81671 688 chr14 106053956 106060608 106057661 N NA NA NA NA NA NA C14orf80 97764 689 chr14 106145152 106156544 106153383,106146915 N,N NA;NA NA NA NA NA NA C14orf80 188960 690 chr14 106158443 106181973 106167592,106162074,106172173,106164708,106178605 N,N,N,N,N NA;NA;NA;NA;NA NA NA NA NA NA KIAA0125 201865 691 chr14 106283222 106286472 106284881 Y TEX22,C14orf80 NA NA NA NA NA KIAA0125 97366 692 chr14 106315184 106330890 106326691,106329398,106321452 N,N,N NA;NA;NA NA NA NA NA NA KIAA0125 52948 693 chr14 106349654 106350854 106350442 N NA KIAA0125 NA NA NA NA KIAA0125 32984 694 chr14 106351781 106358001 106355848 N NA KIAA0125 NA NA NA NA KIAA0125 25837 695 chr14 106359353 106360615 106360056 N NA KIAA0125 NA NA NA NA KIAA0125 23223 696 chr14 106362223 106364707 106363631 N NA KIAA0125 NA NA NA NA KIAA0125 19131 697 chr14 106368454 106369278 106368907 N NA KIAA0125 NA NA NA NA KIAA0125 14560 698 chr14 106451554 106454716 106452905 N NA NA NA NA NA NA KIAA0125 67716 699 chr14 106477736 106478752 106478300 N NA NA NA NA NA NA KIAA0125 93898 700 chr14 106552024 106555032 106552844 N NA NA NA NA NA NA KIAA0125 168186 701 chr14 106558604 106560840 106559566 N NA NA NA NA NA NA KIAA0125 174766 702 chr14 106667040 106668158 106667478 N NA NA NA NA NA NA KIAA0125 283202 703 chr14 106779962 106782065 106780771 N NA NA NA NA NA NA KIAA0125 396124 704 chr14 106785125 106788587 106787165 N NA NA NA NA NA NA KIAA0125 401287 705 chr14 106789299 106792064 106790750 N NA NA NA NA NA NA KIAA0125 405461 706 chr14 106799168 106806798 106805668 N NA NA NA NA NA NA KIAA0125 415330 707 chr14 106828573 106830276 106829808 N NA NA NA NA NA NA KIAA0125 444735 708 chr14 106863066 106880312 106873422,106878072 N,N NA;NA NA NA NA NA NA KIAA0125 479228 709 chr14 106918682 106933384 106925511,106922917 N,N NA;NA NA NA NA NA NA KIAA0125 534844 710 chr14 106985519 106987408 106986351 N NA NA NA NA NA NA KIAA0125 601681 711 chr14 107082892 107085814 107084383 N NA NA NA NA NA NA KIAA0125 699054 712 chr14 107092747 107097140 107096394 N NA NA NA NA NA NA KIAA0125 708909 713 chr14 107149851 107151882 107150843 N NA NA NA NA NA NA KIAA0125 766013 714 chr14 107153658 107156524 107155035,107155325 N,N NA;NA NA KIAA0125 IMR90 Hi-C 24141950 KIAA0125 769820 715 chr14 107166282 107171386 107170007 N NA NA LINC00221 IMR90 Hi-C 24141950 KIAA0125 782444 716 chr14 107174538 107180952 107175914 N NA NA LINC00221 IMR90 Hi-C 24141950 KIAA0125 790700 717 chr14 107182204 107184118 107183388 N NA NA LINC00221 IMR90 Hi-C 24141950 KIAA0125 798366 718 chr14 107240468 107263742 107253045,107259522,107256754 Y,N,N NA;NA;NA NA NA NA NA NA KIAA0125 856630 719 chr14 107279996 107284382 107281477 N NA NA NA NA NA NA KIAA0125 896158 720 chr14 21084788 21087477 21086086 N NA NA KLHL33,PARP2,RPPH1,RNASE4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNASE4 64895 721 chr14 21123407 21142814 21131451,21136879,21133620 N,N,N NA;NA;NA RNASE4 RNASE4,OR6S1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 RNASE4 9558 722 chr14 21284381 21286142 21285332 N NA RNASE6 NA NA NA NA RNASE6 35171 723 chr14 22848392 22857385 22852069,22854367,22849678 N,N,N NA;NA;NA NA OXA1L,SLC7A7,RBM23,DAD1,REM2,LRP10 IMR90 Hi-C 24141950 DAD1 200758 724 chr14 22915963 22919721 22917617 N NA NA OXA1L,SLC7A7 IMR90 Hi-C 24141950 DAD1 138422 725 chr14 22922909 22931097 22929713 N NA NA OXA1L,SLC7A7 IMR90 Hi-C 24141950 DAD1 127046 726 chr14 23181678 23183568 23182463 N NA NA OXA1L,SLC7A7,DAD1,RBM23 IMR90 Hi-C 24141950 OXA1L 52163 727 chr14 24070455 24077517 24071486,24075497 N,Y NA;NA ZFHX2,JPH4 C14orf167 IMR90 Hi-C 24141950 JPH4 22446 728 chr14 24100004 24103011 24101368 N NA NA NA NA NA NA JPH4 51995 729 chr14 25141862 25145977 25143322 N NA NA NA NA NA NA SDR39U1 229855 730 chr14 31317377 31319629 31318738 N NA COCH,LOC100506071 NA NA NA NA COCH 24112 731 chr14 32669507 32672529 32671449 N NA NA NUBPL,ARHGAP5-AS1,ARHGAP5 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP5 123012 732 chr14 34528145 34531097 34529613 Y EGLN3 NA EGLN3 K562,MCF7 ChIA-PET 22265404 SPTSSA 400371 733 chr14 34800458 34802884 34801275 N NA NA SPTSSA MCF7 ChIA-PET 22265404 SPTSSA 128584 734 chr14 35834841 35838066 35837023 Y NA NFKBIA PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFKBIA 35894 735 chr14 35884161 35887333 35885926 N NA NFKBIA PSMA6,NFKBIA,KIAA0391,PPP2R3C,FAM177A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFKBIA 10201 736 chr14 36370962 36375139 36371117 N NA NA NA NA NA NA BRMS1L 75365 737 chr14 39914340 39920051 39916806 N NA FBXO33 NA NA NA NA FBXO33 12636 738 chr14 39937481 39940651 39938676 N NA FBXO33 NA NA NA NA FBXO33 35777 739 chr14 50325666 50336600 50329523,50334991 N,Y NA;RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 6127 740 chr14 50479266 50515355 50506301,50512257,50514244 N,Y,N NA;RPL36AL,ARF6,SOS2,C14orf182;NA C14orf182,C14orf183 C14orf182,ARF6,NEMF,METTL21D,SOS2,C14orf183 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 C14orf182 5028 741 chr14 51143438 51145218 51144318 N NA SAV1 ATL1,SAV1,NIN IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SAV1 8415 742 chr14 51325307 51327515 51326307 N NA NIN ATL1,NIN,PYGL,ABHD12B IMR90 Hi-C 24141950 NIN 27468 743 chr14 51668998 51671116 51670098 N NA TMX1 TRIM9,ABHD12B,PYGL IMR90 Hi-C 24141950 TMX1 35770 744 chr14 52312180 52316530 52314188 N NA GNG2 GNG2,FRMD6,C14orf166 IMR90 Hi-C 24141950 GNG2 10492 745 chr14 54036535 54039220 54037482 N NA NA BMP4 IMR90 Hi-C 24141950 BMP4 384334 746 chr14 54079297 54082019 54080467 N NA NA NA NA NA NA BMP4 341535 747 chr14 54346031 54351551 54348515 N NA NA BMP4 IMR90 Hi-C 24141950 BMP4 72003 748 chr14 54355728 54362703 54360808,54357768 N,N NA;NA NA BMP4 IMR90 Hi-C 24141950 BMP4 60851 749 chr14 55564093 55566607 55565199 Y LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L MAPK1IP1L LGALS3,DLGAP5 IMR90 Hi-C 24141950 MAPK1IP1L 45731 750 chr14 55567885 55570860 55569972 Y LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L MAPK1IP1L LGALS3,DLGAP5,MAPK1IP1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAPK1IP1L 49523 751 chr14 55924624 55926990 55925818 N NA ATG14 KTN1 IMR90 Hi-C 24141950 ATG14 46048 752 chr14 60430691 60433127 60432152 N NA NA DHRS7 IMR90 Hi-C 24141950 C14orf135 125502 753 chr14 60648879 60650901 60649845 N NA DHRS7 DHRS7 IMR90 Hi-C 24141950 DHRS7 16668 754 chr14 60669489 60690370 60672824,60679796,60688323 N,Y,N NA;NA;NA DHRS7,PPM1A PPM1A K562,MCF7 ChIA-PET 22265404 PPM1A 22100 755 chr14 60793605 60800135 60794710,60798429 N,N NA;NA NA C14orf39,SIX6,TMEM30B IMR90 Hi-C 24141950 PPM1A 81135 756 chr14 61123126 61125302 61123964 N NA NA SLC38A6 IMR90 Hi-C 24141950 MNAT1 76157 757 chr14 62155986 62159320 62157968 Y HIF1A HIF1A PRKCH,FLJ22447 IMR90 Hi-C 24141950 HIF1A 2799 758 chr14 64212115 64213866 64212972 N NA SGPP1 NA NA NA NA SGPP1 17359 759 chr14 64214867 64217579 64215730 N NA SGPP1 NA NA NA NA SGPP1 20111 760 chr14 64238951 64242390 64240383 N NA SGPP1 SYNE2,ESR2,PPP2R5E,WDR89,SGPP1 IMR90 Hi-C 24141950 SGPP1 44195 761 chr14 64837725 64841046 64839839 N NA MTHFD1 NA NA NA NA MTHFD1 13713 762 chr14 65633028 65640656 65635981 N NA NA LOC645431,FUT8,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 63801 763 chr14 65645487 65649097 65647163 N NA NA LOC645431,FUT8,MIR4708 IMR90 Hi-C 24141950 MAX 76260 764 chr14 65659801 65663494 65661957 N NA NA FUT8,LOC645431,MIR4708 IMR90 Hi-C 24141950 MAX 90574 765 chr14 65670177 65676459 65673095 Y NA NA LOC645431,FUT8 IMR90 Hi-C 24141950 MAX 100950 766 chr14 65694623 65698367 65696012 N NA NA FUT8,LOC645431,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 125396 767 chr14 65758821 65762566 65760155 N NA NA FUT8,LOC645431,MIR4708 IMR90 Hi-C 24141950 FUT8 114744 768 chr14 65763461 65780957 65763786,65769289 N,N NA;NA NA FUT8,LOC645431,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FUT8 96353 769 chr14 69126927 69132390 69130065 N NA NA RAD51B,ZFP36L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 130570 770 chr14 69150911 69153994 69152330 N NA NA RAD51B,ZFP36L1 IMR90 Hi-C 24141950 ZFP36L1 108966 771 chr14 69160565 69163020 69162230 Y NA NA ZFP36L1,RAD51B IMR90 Hi-C 24141950 ZFP36L1 99940 772 chr14 69271632 69292077 69272789,69282688,69288499,69291692 N,N,N,N NA;NA;NA;NA ZFP36L1 RAD51B,ZFP36L1,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 8672 773 chr14 70315567 70318846 70317175 N NA NA SLC8A3,SMOC1 IMR90 Hi-C 24141950 LOC100289511 81137 774 chr14 71287415 71293508 71288812 N NA MAP3K9 PCNX IMR90 Hi-C 24141950 MAP3K9 11527 775 chr14 71352067 71355598 71353415 N NA PCNX MAP3K9 IMR90 Hi-C 24141950 PCNX 18524 776 chr14 71783134 71833936 71787278,71788968,71791807,71825443 N,N,N,N NA;NA;NA;NA NA SIPA1L1,PCNX,LOC145474,SNORD56B IMR90 Hi-C 24141950 LOC145474 120642 777 chr14 72322459 72323775 72323103 N NA NA SIPA1L1,PCNX IMR90 Hi-C 24141950 RGS6 75042 778 chr14 75341897 75345010 75342817 N NA DLST,RPS6KL1 DLST K562 ChIA-PET 22265404 DLST 3584 779 chr14 75428342 75429995 75429037 N NA RPS6KL1,PGF,EIF2B2 DLST,RPS6KL1,PROX2,MLH3,EIF2B2,ZC2HC1C,NEK9,ACYP1,TMED10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PGF 5875 780 chr14 75688230 75691503 75689095,75690672 Y,N DLST,FOS;NA TMED10 PGF,NEK9,TMED10,FOS,LOC731223,BATF IMR90 Hi-C 24141950 TMED10 44881 781 chr14 75723508 75726993 75725874 N NA FOS,LOC731223 TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2,BATF,PGF IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOS 18488 782 chr14 75799685 75805841 75800953 Y FOS,JDP2,FLVCR2,BATF LOC731223 NEK9,TMED10,JDP2,BATF,FLVCR2 IMR90 Hi-C 24141950 LOC731223 38578 783 chr14 75806901 75808990 75808265 N NA LOC731223 JDP2,BATF IMR90 Hi-C 24141950 LOC731223 45794 784 chr14 77186856 77188158 77186965 N NA NA VASH1,ANGEL1,C14orf166B IMR90 Hi-C 24141950 ANGEL1 91125 785 chr14 77384697 77387726 77385912 N NA NA IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANGEL1 105414 786 chr14 77412613 77416194 77413570 N NA NA IRF2BPL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 78840 787 chr14 77419416 77430179 77425775,77422993,77428197 N,N,Y NA;NA;NA NA IRF2BPL,KIAA1737 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 64855 788 chr14 77442977 77446248 77444419 Y NA IRF2BPL IRF2BPL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 48786 789 chr14 77463761 77468316 77467007 Y ZDHHC22,NGB,VASH1,KIAA1737,IRF2BPL IRF2BPL NA NA NA NA IRF2BPL 26718 790 chr14 77504867 77509439 77506277 N NA IRF2BPL IRF2BPL IMR90 Hi-C 24141950 IRF2BPL 9833 791 chr14 78106933 78109668 78108229 N NA SPTLC2 NA NA NA NA SPTLC2 23823 792 chr14 82464196 82469795 82467988 N NA NA NA NA NA NA SEL1L 463991 793 chr14 82510871 82514105 82512194 N NA NA NA NA NA NA SEL1L 510666 794 chr14 90847605 90851708 90849643 N NA C14orf102,CALM1 C14orf102,CALM1,TTC7B,EFCAB11,TDP1,PSMC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CALM1 11619 795 chr14 91294783 91295832 91295235 Y NA NA TTC7B,RPS6KA5,CCDC88C,C14orf159 IMR90 Hi-C 24141950 C14orf159 284525 796 chr14 92725767 92727262 92726715 N NA NA RIN3,SLC24A4 IMR90 Hi-C 24141950 CPSF2 137469 797 chr14 93223149 93227895 93225776 N NA LGMN,GOLGA5 SLC24A4,LGMN IMR90 Hi-C 24141950 LGMN 8102 798 chr14 93228820 93233244 93230597 N NA LGMN,GOLGA5 SLC24A4,LGMN,TRIP11,RIN3 IMR90 Hi-C 24141950 LGMN 13773 799 chr14 95788520 95795922 95794346 N NA CLMN CLMN,GSC IMR90 Hi-C 24141950 CLMN 2275 800 chr14 96191646 96194247 96192449 N NA TCL1A TCL1B IMR90 Hi-C 24141950 TCL1A 11113 801 chr14 97058113 97062465 97059065 N NA NA NA NA NA NA PAPOLA 89400 802 chr14 97797957 97800076 97798691 N NA NA NA NA NA NA VRK1 534273 803 chr14 97842890 97847865 97845308 N NA NA NA NA NA NA VRK1 579206 804 chr14 97850466 97856068 97853675 N NA NA NA NA NA NA VRK1 586782 805 chr14 97872982 97883770 97879553,97875332,97882767 N,Y,N NA;NA;NA NA NA NA NA NA VRK1 609298 806 chr14 97923761 97930477 97925330 N NA NA VEZT MCF7 ChIA-PET 19890323 VRK1 660077 807 chr14 98645903 98650920 98648522 N NA NA NA NA NA NA SETD3 1296306 808 chr14 98662210 98667719 98664787,98664895 Y,Y NA;NA NA NA NA NA NA SETD3 1279507 809 chr14 98671372 98678319 98674096,98676937 N,Y NA;NA NA CMTM7 MCF7 ChIA-PET 19890323 SETD3 1268907 810 chr15 100025333 100028559 100026741 Y MEF2A,MEF2A NA MEF2A,LRRC28,LYSMD4 IMR90 Hi-C 24141950 MEF2A 77574 811 chr15 100034664 100046210 100043779 N NA NA MEF2A,LRRC28 IMR90 Hi-C 24141950 MEF2A 59923 812 chr15 100046722 100054866 100052427,100054704,100050360,100047487 N,N,N,N NA;NA;NA;NA NA MEF2A,LRRC28,TTC23 IMR90 Hi-C 24141950 MEF2A 51267 813 chr15 100366163 100368537 100367088 N NA DNM1P46 NA NA NA NA DNM1P46 19031 814 chr15 100388339 100393824 100390088 N NA DNM1P46 NA NA NA NA DNM1P46 41207 815 chr15 100429416 100439340 100431704,100436077 N,N NA;NA NA CERS3 IMR90 Hi-C 24141950 DNM1P46 82284 816 chr15 101666141 101670055 101667427 Y NA NA CHSY1,LRRK1,SELS IMR90 Hi-C 24141950 CHSY1 122082 817 chr15 20993628 20996014 20994402 N NA NA NBEAP1,NF1P2 IMR90 Hi-C 24141950 TUBGCP5 1837381 818 chr15 22459040 22462291 22460653 N NA NA HERC2P3,CHEK2P2 IMR90 Hi-C 24141950 TUBGCP5 371104 819 chr15 22472559 22474193 22473090 N NA NA HERC2P3,CHEK2P2,LOC348120,NBEAP1,POTEB IMR90 Hi-C 24141950 TUBGCP5 359202 820 chr15 26326674 26328338 26327514 Y NA NA LOC100128714,ATP10A IMR90 Hi-C 24141950 UBE3A 642499 821 chr15 30336779 30338291 30337446 N NA NA TJP1,FAM189A1,APBA2 IMR90 Hi-C 24141950 ULK4P3 57644 822 chr15 30761994 30782972 30763219 N NA NA NA NA NA NA ARHGAP11B 135907 823 chr15 31546618 31550693 31548843 N NA LOC283710 LOC283710,OTUD7A,KLF13 IMR90 Hi-C 24141950 LOC283710 23568 824 chr15 31553868 31560655 31555878,31558702 N,Y NA;MTMR10,KLF13 LOC283710 LOC283710,OTUD7A,KLF13 IMR90 Hi-C 24141950 LOC283710 30818 825 chr15 31592689 31595958 31593748 N NA KLF13 OTUD7A,LOC283710,KLF13,MTMR10,TRPM1 IMR90 Hi-C 24141950 KLF13 23125 826 chr15 31725499 31734960 31730326 N NA NA KLF13,OTUD7A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 106416 827 chr15 31748570 31754071 31751481,31750783 Y,N NA;NA NA KLF13,OTUD7A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 129487 828 chr15 34786493 34789333 34787532 N NA NA NA NA NA NA GOLGA8A 56826 829 chr15 38350362 38352302 38351228 N NA NA SPRED1 IMR90 Hi-C 24141950 FAM98B 394026 830 chr15 38363467 38366598 38365050 N NA NA SPRED1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM98B 379730 831 chr15 38421506 38423714 38422193 Y NA NA SPRED1 IMR90 Hi-C 24141950 FAM98B 322614 832 chr15 38915130 38917790 38916372 N NA NA RASGRP1,FAM98B IMR90 Hi-C 24141950 RASGRP1 58123 833 chr15 38921860 38925487 38923847 N NA NA RASGRP1,C15orf53 IMR90 Hi-C 24141950 C15orf53 63312 834 chr15 38942016 38945373 38944211 N NA C15orf53 RASGRP1,FAM98B MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 C15orf53 43426 835 chr15 38960426 38967181 38965440 N NA C15orf53 RASGRP1,FAM98B,C15orf53 IMR90 Hi-C 24141950 C15orf53 21618 836 chr15 40406936 40409894 40408166 N NA BMF,BUB1B SRP14,LOC100131089,BMF,BUB1B,PAK6,PLCB2,ANKRD63 IMR90 Hi-C 24141950 BMF 5861 837 chr15 41912768 41914970 41913685 N NA MGA TYRO3,MAPKBP1,MGA IMR90 Hi-C 24141950 MGA 37640 838 chr15 42782089 42785004 42783385 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 2500 839 chr15 43414863 43416305 43415447 Y NA UBR1,TMEM62 NA NA NA NA TMEM62 9417 840 chr15 45163789 45177231 45174217 N NA NA SORD IMR90 Hi-C 24141950 TRIM69 135229 841 chr15 48293691 48295305 48294314 N NA NA SEMA6D,SLC12A1 IMR90 Hi-C 24141950 MYEF2 175253 842 chr15 49258122 49259683 49258702 N NA NA NA NA NA NA SECISBP2L 79077 843 chr15 51165553 51167915 51166354 N NA AP4E1 TRPM7,USP50,SPPL2A,AP4E1,ASB18 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 AP4E1 32954 844 chr15 51172161 51179189 51173476,51177968 Y,N USP8,SPPL2A;NA AP4E1 TRPM7,SPPL2A,USP50,ASB18,AP4E1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,19890323,22265404 AP4E1 21680 845 chr15 52296660 52302344 52300030 N NA LEO1,MAPK6 TMOD3,LEO1,MAPK6,BCL2L10,GNB5,MYO5C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAPK6 9067 846 chr15 58621911 58626247 58624789 N NA NA LIPC,ADAM10,FAM63B,SLTM IMR90 Hi-C 24141950 ADAM10 415930 847 chr15 58700982 58703502 58702786 N NA NA LIPC,ADAM10,FAM63B IMR90 Hi-C 24141950 ADAM10 338675 848 chr15 58711894 58714596 58712962 N NA NA LIPC,ADAM10,FAM63B,SLTM IMR90 Hi-C 24141950 ADAM10 327581 849 chr15 59270666 59272864 59271899 N NA SLTM,RNF111 FAM81A,RNF111 IMR90 Hi-C 24141950 RNF111 7001 850 chr15 59690518 59707241 59692282,59705051 N,N NA;NA MYO1E,FAM81A MYO1E,LDHAL6B,FAM81A,CCNB2 IMR90 Hi-C 24141950 FAM81A 23131 851 chr15 62678586 62684636 62682676 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 VPS13C 325922 852 chr15 63764474 63769478 63766845 N NA USP3 APH1B,RAB8B,FBXL22,LOC100130855,USP3,CA12,HERC1,FAM96A,SNX1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 USP3 27232 853 chr15 63770998 63775008 63772649 N NA USP3 APH1B,RAB8B,CA12,USP3,HERC1,LOC100130855,FBXL22 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 USP3 21702 854 chr15 64171953 64176844 64173144 N NA HERC1 DAPK2,HERC1,FAM96A IMR90 Hi-C 24141950 HERC1 45806 855 chr15 65182916 65189604 65183821,65186262,65187150 N,Y,Y NA;ZNF609,OAZ2,PLEKHO2,SPG21,SPG21;ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16 PLEKHO2,ANKDD1A SPG21 IMR90 Hi-C 24141950 ANKDD1A 14497 856 chr15 65586902 65589883 65588287 N NA PARP16 MTFMT,IGDCC4,PDCD7,RASL12,IGDCC3,OSTBETA,CILP,PARP16,CLPX,UBAP1L,DPP8,PTPLAD1,SPG21,KBTBD13 MCF7,K562 ChIA-PET 22265404 PARP16 7884 857 chr15 65595264 65598675 65596890 Y DENND4A PARP16 PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARP16 16246 858 chr15 66096904 66104446 66099903 N NA DENND4A SLC24A1,DENND4A,PPP1R2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 DENND4A 12273 859 chr15 66123961 66127483 66125373 N NA DENND4A,RAB11A SLC24A1,DENND4A,PTPLAD1,C15orf44,RAB11A,MEGF11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB11A 34314 860 chr15 66661110 66663588 66662425 Y MAP2K1 TIPIN,MAP2K1 RPL4,SNORD18C,SNORD18B,SNORD16,SNAPC5,ZWILCH IMR90 Hi-C 24141950 TIPIN 12056 861 chr15 68153932 68158087 68155544 N NA NA PIAS1,CLN6,CALML4,C15orf61,LOC100506686 IMR90 Hi-C 24141950 PIAS1 188485 862 chr15 68176320 68178152 68177266 N NA NA PIAS1,CLN6,C15orf61,LOC100506686,CALML4 IMR90 Hi-C 24141950 PIAS1 168420 863 chr15 68194184 68197587 68195199 N NA NA PIAS1,CLN6,C15orf61,LOC100506686,CALML4 IMR90 Hi-C 24141950 PIAS1 148985 864 chr15 68229235 68232068 68230236 N NA NA PIAS1,CALML4,CLN6,C15orf61,LOC100506686 IMR90 Hi-C 24141950 PIAS1 114504 865 chr15 68235959 68241550 68239141 N NA NA PIAS1,CALML4,CLN6,C15orf61,LOC100506686 IMR90 Hi-C 24141950 PIAS1 105022 866 chr15 68259402 68262140 68260597 Y C15orf61 NA PIAS1,LOC100506686,C15orf61,IQCH IMR90 Hi-C 24141950 PIAS1 84432 867 chr15 69957515 69962773 69959576,69961635 N,N NA;NA NA TLE3,C15orf50,LOC145837 IMR90 Hi-C 24141950 RPLP1 212356 868 chr15 70041609 70045414 70043372 N NA NA TLE3 IMR90 Hi-C 24141950 RPLP1 296450 869 chr15 70306097 70310252 70308379 N NA NA C15orf50 IMR90 Hi-C 24141950 TLE3 80004 870 chr15 70486677 70490436 70489183 N NA NA TLE3,LOC145837,C15orf50 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TLE3 96421 871 chr15 70550028 70552322 70551347 N NA NA LOC145837,C15orf50 IMR90 Hi-C 24141950 TLE3 159772 872 chr15 70591958 70594007 70592994 Y NA NA LOC145837 IMR90 Hi-C 24141950 TLE3 201702 873 chr15 70610575 70613059 70612016 Y NA NA C15orf50,TLE3,LOC145837 IMR90 Hi-C 24141950 TLE3 220319 874 chr15 70753999 70757016 70755589 Y TLE3 NA TLE3,C15orf50,KIF23,LOC145837 IMR90 Hi-C 24141950 TLE3 363743 875 chr15 70759982 70773861 70766985,70772376 Y,N TLE3;NA NA TLE3,C15orf50,KIF23,LOC145837 IMR90 Hi-C 24141950 TLE3 369726 876 chr15 70775396 70799214 70779331,70784630,70796498 Y,N,N TLE3;NA;NA NA KIF23,LOC145837,TLE3,C15orf50,UACA,RPLP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TLE3 385140 877 chr15 70819791 70822192 70820707 N NA NA TLE3,LOC145837 IMR90 Hi-C 24141950 THAP10 362580 878 chr15 72752078 72755821 72754668 N NA ARIH1 CELF6,TMEM202,HEXA,C15orf34,ARIH1,PARP6,BBS4,HIGD2B,GOLGA6B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARIH1 10846 879 chr15 72928127 72932440 72929282 N NA BBS4 CELF6 IMR90 Hi-C 24141950 BBS4 46080 880 chr15 74391412 74393996 74392622 N NA NA NA NA NA NA PML 104398 881 chr15 75386787 75393802 75388128 N NA NA NA NA NA NA PPCDC 70860 882 chr15 75404226 75410044 75405256 N NA NA SCAMP5,PPCDC,C15orf39 IMR90 Hi-C 24141950 C15orf39 84177 883 chr15 75421477 75427398 75423098 N NA NA PPCDC,SCAMP5,C15orf39,RPP25 IMR90 Hi-C 24141950 C15orf39 66823 884 chr15 75443386 75445533 75444534 N NA C15orf39 PPCDC,C15orf39 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C15orf39 48688 885 chr15 77195408 77198391 77197741 N NA SCAPER,RCN2 ETFA IMR90 Hi-C 24141950 SCAPER 19191 886 chr15 77279389 77282699 77281000 Y PSTPIP1 PSTPIP1 PSTPIP1,RCN2,TSPAN3 IMR90 Hi-C 24141950 PSTPIP1 4766 887 chr15 78234554 78238197 78237001 N NA NA TBC1D2B,DNAJA4,IDH3A,CIB2,IREB2,LOC91450,SH2D7,WDR61,LOC645752,ACSBG1 IMR90 Hi-C 24141950 TBC1D2B 131797 888 chr15 79122617 79124266 79123287 N NA MORF4L1 NA NA NA NA MORF4L1 40906 889 chr15 79132204 79137171 79134110 N NA MORF4L1 NA NA NA NA MORF4L1 28001 890 chr15 79151226 79154103 79152777 Y IREB2 MORF4L1 MORF4L1,ADAMTS7 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 MORF4L1 11069 891 chr15 80279231 80290697 80283254,80285459,80289036 N,N,N NA;NA;NA BCL2A1 ST20-MTHFS,MTHFS,C15orf37,BCL2A1,ZFAND6,FAH IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCL2A1 15588 892 chr15 80322978 80328367 80325958,80327739 N,N NA;NA ZFAND6 ST20-MTHFS,C15orf37,FAH,ZFAND6,MTHFS IMR90 Hi-C 24141950 ZFAND6 23543 893 chr15 83759394 83762807 83761421 Y TM6SF1 BTBD1 BTBD1,MIR4515 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTBD1 23288 894 chr15 85276241 85280859 85278548 N NA SEC11A,ZNF592 SEC11A,ZNF592 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF592 10959 895 chr15 85776181 85779031 85778024 N NA NA NA NA NA NA AKAP13 144840 896 chr15 85854621 85863352 85856278,85861827 N,Y NA;PDE8A,AKAP13 NA AKAP13 IMR90 Hi-C 24141950 AKAP13 60519 897 chr15 85871264 85876409 85873733 N NA AKAP13 AKAP13 IMR90 Hi-C 24141950 AKAP13 47462 898 chr15 91226316 91231595 91228843 N NA BLM BLM,CRTC3,IQGAP1,ZNF774 IMR90 Hi-C 24141950 BLM 28984 899 chr15 91233348 91238694 91235462 N NA BLM BLM,CRTC3,IQGAP1,ZNF774 IMR90 Hi-C 24141950 BLM 21885 900 chr15 93361745 93365893 93363744 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 NA ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 LOC100507217 60180 901 chr15 93373319 93377452 93375168 Y NA LOC100507217 CHD2,LOC100507217,ASB9P1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100507217 48621 902 chr15 93391763 93393871 93392698 N NA LOC100507217,CHD2 LOC100507217 K562 ChIA-PET 22265404 LOC100507217 32202 903 chr15 94772900 94782110 94773866 N NA NA MCTP2 IMR90 Hi-C 24141950 MCTP2 59320 904 chr15 96514447 96520300 96517469 N NA NA NR2F2,LOC400456,LOC145820 IMR90 Hi-C 24141950 MCTP2 1673017 905 chr15 96594343 96598717 96597079 N NA NA NR2F2,LOC400456,LOC145820 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MCTP2 1752913 906 chr15 99142425 99144666 99143757 N NA NA NA NA NA NA TTC23 645149 907 chr15 99557565 99565456 99558607 N NA NA PGPEP1L,IGF1R MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TTC23 224359 908 chr15 99601480 99603273 99602608 N NA NA IGF1R,PGPEP1L,FAM169B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TTC23 186542 909 chr15 99991628 99994045 99993164 Y MEF2A,MEF2A NA MEF2A,LRRC28 IMR90 Hi-C 24141950 MEF2A 112088 910 chr16 10389974 10393748 10391121 N NA NA NA NA NA NA ATF7IP2 86164 911 chr16 10923748 10929301 10925933 N NA FAM18A,CIITA CIITA IMR90 Hi-C 24141950 FAM18A 11127 912 chr16 10933436 10940104 10937404 N NA FAM18A,CIITA CIITA,TEKT5,NUBP1,FAM18A IMR90 Hi-C 24141950 FAM18A 20815 913 chr16 10960292 10966726 10962653,10965137,10961316 Y,Y,N NUBP1,SOCS1,CIITA;NUBP1,SOCS1,CIITA;NA FAM18A,CIITA CIITA IMR90 Hi-C 24141950 CIITA 4329 914 chr16 11317000 11321390 11318774 N NA SOCS1 CLEC16A,SOCS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS1 28649 915 chr16 11389848 11394919 11391747 N NA SOCS1,RMI2 SOCS1,DEXI,CLEC16A,PRM2,PRM3,TNP2,RMI2,ZC3H7A,BCAR4 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SOCS1 39809 916 chr16 11403988 11407137 11405214 N NA RMI2 CLEC16A,TNP2,RMI2,ZC3H7A,BCAR4 IMR90 Hi-C 24141950 RMI2 32174 917 chr16 11472404 11477118 11473437 Y ZC3H7A,TXNDC11,SNN,LITAF,LITAF,CLEC16A,SOCS1 RMI2 RMI2,BCAR4 IMR90 Hi-C 24141950 RMI2 33093 918 chr16 11588300 11590275 11589356 N NA NA SNN,TXNDC11,CLEC16A,LITAF IMR90 Hi-C 24141950 LITAF 91047 919 chr16 11599708 11601066 11600165 N NA NA CLEC16A,LITAF IMR90 Hi-C 24141950 LITAF 80256 920 chr16 11715366 11719458 11715906 Y NA LITAF,SNN CLEC16A,TXNDC11,PRM2,PRM1,LITAF,SNN,BCAR4,ZC3H7A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LITAF 34044 921 chr16 13481790 13486265 13484764 N NA NA NA NA NA NA ERCC4 527749 922 chr16 1352453 1355193 1354491 N NA UBE2I,C16orf42,GNPTG UNKL K562 ChIA-PET 22265404 UBE2I 3961 923 chr16 13529184 13533222 13530537 N NA NA NA NA NA NA ERCC4 480792 924 chr16 14447439 14451077 14449354 N NA NA PARN,ERCC4,MIR365A,MIR193B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARN 273051 925 chr16 14498760 14501147 14499913 N NA NA PARN,MIR193B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARN 222981 926 chr16 14795964 14798826 14797398 N NA NA NA NA NA NA BFAR 69296 927 chr16 14835181 14839344 14836502 N NA NA NA NA NA NA NOMO1 88299 928 chr16 15988957 15995056 15991796,15993640,15993654 N,N,N NA;NA;NA FOPNL,ABCC1 MYH11,FOPNL,ABCC1,ABCC6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOPNL 6510 929 chr16 16000585 16003430 16002091 N NA FOPNL,ABCC1 MYH11,ABCC1 IMR90 Hi-C 24141950 FOPNL 18138 930 chr16 17106332 17112234 17107734 N NA NA NA NA NA NA XYLT1 452504 931 chr16 17119365 17122864 17121334 N NA NA NA NA NA NA XYLT1 441874 932 chr16 17161194 17169855 17165187 N NA NA NA NA NA NA XYLT1 394883 933 chr16 18966812 18969002 18967785 N NA SMG1,TMC7 SMG1,ITPRIPL2 IMR90 Hi-C 24141950 TMC7 26254 934 chr16 21551874 21554956 21552703 N NA SLC7A5P2 METTL9,IGSF6 IMR90 Hi-C 24141950 SLC7A5P2 20109 935 chr16 21564714 21567493 21566273 Y DNAH3 SLC7A5P2,METTL9 METTL9,IGSF6 IMR90 Hi-C 24141950 SLC7A5P2 32949 936 chr16 21940428 21943391 21941859 N NA UQCRC2 NA NA NA NA UQCRC2 21218 937 chr16 22199246 22204950 22201026,22202542,22203249 N,N,N NA;NA;NA EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 12642 938 chr16 22205921 22208305 22207050 Y NA EEF2K POLR3E,EEF2K,UQCRC2,PDZD9,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 9287 939 chr16 24672234 24675746 24674673 N NA NA TNRC6A,ARHGAP17,SLC5A11,RBBP6 IMR90 Hi-C 24141950 TNRC6A 65303 940 chr16 25077202 25086355 25078220 N NA LOC554206,LCMT1 LCMT1,LOC100506655,TNRC6A,ARHGAP17,SLC5A11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC554206 34140 941 chr16 25116124 25120788 25118485 N NA LCMT1 ARHGAP17,LCMT1,ZKSCAN2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LCMT1 2259 942 chr16 27210032 27212769 27211257 N NA JMJD5 NA NA NA NA JMJD5 2038 943 chr16 28823545 28831242 28827933 N NA ATXN2L,TUFM,SH2B1 ATXN2L,TUFM,RABEP2,CD19,NFATC2IP,SPNS1,ATP2A1,SH2B1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATXN2L 3172 944 chr16 2914279 2919327 2918389 N NA ZG16B,FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 13869 945 chr16 29408122 29415144 29411984 N NA NA NA NA NA NA BOLA2B 51141 946 chr16 29637898 29639791 29638761 N NA SPN QPRT,SPN IMR90 Hi-C 24141950 SPN 34509 947 chr16 29651432 29660213 29656247 N NA SPN,QPRT SPN K562 ChIA-PET 22265404 SPN 14087 948 chr16 29663826 29667016 29664972 N NA SPN,QPRT SPN K562 ChIA-PET 22265404 SPN 7284 949 chr16 30466567 30472776 30470494 N NA ZNF771,DCTPP1,SEPHS2,ITGAL SEPHS2,ZNF771,DCTPP1,ZNF688,PRR14,ZNF764,ITGAL,ZNF689,ZNF747,ZNF785,ZNF768,SRCAP MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 SEPHS2 9343 950 chr16 30642342 30647356 30645774 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF785,ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRR14 14885 951 chr16 30815770 30822952 30817251 N NA RNF40,ZNF629 C16orf93,PHKG2,RNF40,ZNF629,MIR762,BCL7C,CTF1,MIR4519,FBXL19-AS1,FBXL19,SRCAP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF629 17247 952 chr16 30824177 30829145 30825811 Y NA ZNF629 ZNF629,RNF40,MIR4519 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF629 25654 953 chr16 31025181 31029395 31027876 N NA HSD3B7,STX1B,STX4 STX1B,DEC1 K562,MCF7 ChIA-PET 22265404,19890323 STX1B 3352 954 chr16 3220427 3223455 3222045 N NA ZNF213 NA NA NA NA ZNF213 35370 955 chr16 3232229 3233715 3232533 N NA ZNF213 ZNF263,ZNF200 MCF7,K562 ChIA-PET 22265404 ZNF213 47172 956 chr16 3236417 3240802 3237999,3238078,3239525 Y,Y,N NA;NA;NA ZNF200 ZNF200 K562 ChIA-PET 22265404 ZNF200 44655 957 chr16 33445037 33448212 33446016 N NA NA NA NA NA NA ZNF267 1559958 958 chr16 33457690 33461968 33458460 N NA NA NA NA NA NA ZNF267 1572611 959 chr16 34870753 34872301 34871922 N NA NA NA NA NA NA ZNF267 2985674 960 chr16 4350118 4359381 4357112,4357756 N,Y NA;CORO7 LOC100507501,TFAP4,PAM16 ADCY9,TFAP4,CREBBP,VASN,CORO7-PAM16,LOC100507501 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TFAP4 27117 961 chr16 47045816 47052497 47050687,47052261 N,N NA;NA DNAJA2 ABCC12,ABCC11,DNAJA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAJA2 38191 962 chr16 47064775 47074871 47072102 Y DNAJA2 NA ABCC12,ABCC11,PHKB,MIR548AE2,DNAJA2,NETO2,ITFG1 IMR90 Hi-C 24141950 DNAJA2 57150 963 chr16 47079737 47082802 47081170 N NA NA ABCC11,DNAJA2,NETO2,ITFG1,PHKB,ABCC12 IMR90 Hi-C 24141950 DNAJA2 72112 964 chr16 47813144 47814746 47813632 N NA NA ITFG1,NETO2 IMR90 Hi-C 24141950 PHKB 317934 965 chr16 48656491 48659237 48657414 N NA N4BP1 ABCC11,SIAH1,MIR548AE2,N4BP1 IMR90 Hi-C 24141950 N4BP1 12371 966 chr16 53552079 53553987 53552836 Y LOC643802,RBL2,AKTIP AKTIP NA NA NA NA AKTIP 14909 967 chr16 57333266 57335099 57334213,57335091 N,N NA;NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,POLR2C,DOK4,CCDC102A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,GPR114 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 54228 968 chr16 57336674 57340758 57337563 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,RSPRY1,ARL2BP,COQ9,CX3CL1,CCL22,POLR2C,GPR114,CCDC102A IMR90 Hi-C 24141950 CCL22 51937 969 chr16 57374054 57381268 57375107,57377586 N,N NA;NA CCL22,CX3CL1 POLR2C,COQ9,CCL17,PLLP,CIAPIN1,CCDC102A,FAM192A,RSPRY1,ARL2BP IMR90 Hi-C 24141950 CCL22 11427 970 chr16 57381952 57385768 57383365 N NA CCL22,CX3CL1 NA NA NA NA CCL22 6927 971 chr16 57842995 57847316 57844412 N NA NA NA NA NA NA KATNB1 73335 972 chr16 62672479 62673998 62673389 N NA NA NA NA NA NA GOT2 3904233 973 chr16 67537312 67554340 67552775,67538350 N,Y NA;NA ATP6V0D1,FAM65A,CTCF AGRP,TSNAXIP1,LRRC36,FAM65A,PARD6A,C16orf48,GFOD2,C16orf86,RLTPR,CTCF,ACD,PSKH1,RANBP10,CTRL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM65A 8377 974 chr16 68503067 68506387 68504567 Y DPEP2 NA PRMT7,SMPD3 IMR90 Hi-C 24141950 ZFP90 67274 975 chr16 68563122 68567551 68564058 N NA ZFP90 CDH1 IMR90 Hi-C 24141950 ZFP90 6110 976 chr16 69553766 69556339 69555026 N NA NFAT5 NFAT5,CYB5B,TERF2 IMR90 Hi-C 24141950 NFAT5 43530 977 chr16 69564200 69565134 69564723 Y WWP2 NFAT5 NFAT5,CYB5B,TERF2,MIR1538 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAT5 34735 978 chr16 71643870 71645754 71644652 N NA NA HPR,HYDIN IMR90 Hi-C 24141950 PHLPP2 102950 979 chr16 71848954 71854201 71852240,71850331 N,N NA;NA AP1G1,ATXN1L AP1G1 K562 ChIA-PET 22265404 AP1G1 5978 980 chr16 72696274 72701868 72698972 N NA NA ZFHX3 IMR90 Hi-C 24141950 ZFHX3 390666 981 chr16 73321691 73325186 73323777 N NA NA HP,HPR,LOC100506172 IMR90 Hi-C 24141950 ZFHX3 229157 982 chr16 79801287 79806003 79801985,79804577 N,N NA;NA NA WWOX IMR90 Hi-C 24141950 CDYL2 1032172 983 chr16 79876408 79881019 79879458,79877872 N,N NA;NA NA NA NA NA NA CDYL2 957156 984 chr16 79908461 79912157 79909807 N NA NA NA NA NA NA CDYL2 926018 985 chr16 80610601 80615984 80614232 N NA NA DYNLRB2 IMR90 Hi-C 24141950 CDYL2 222191 986 chr16 81771400 81809800 81779956,81772464,81782743,81774675,81786062,81808114 N,N,N,N,Y,N NA;NA;NA;NA;PLCG2,CMIP,CMIP;NA PLCG2 CMIP,PKD1L2,GAN,ATMIN,GCSH,MIR4720,BCMO1,PLCG2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PLCG2 3099 987 chr16 84546785 84550842 84548751 Y COTL1 KIAA1609 COTL1 MCF7 ChIA-PET 22265404 KIAA1609 8497 988 chr16 85050798 85056236 85054725 N NA ZDHHC7,KIAA0513 USP10,ZDHHC7,KIAA0513 IMR90 Hi-C 24141950 KIAA0513 5174 989 chr16 85258676 85264285 85261485 N NA NA LOC400548,KIAA0513,FAM92B,LINC00311,LOC727710,KIAA0182 IMR90 Hi-C 24141950 LINC00311 52279 990 chr16 85581936 85622865 85589898,85604185 N,Y NA;NA KIAA0182 GINS2,KIAA0182,LINC00311,LOC400548,FAM92B,KIAA0513,LOC727710,C16orf74,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0182 22164 991 chr16 85892699 85895225 85894096 N NA IRF8 IRF8,COX4I1,FOXF1,LOC400550,MTHFSD,FLJ30679 IMR90 Hi-C 24141950 IRF8 37549 992 chr16 85921034 85923344 85922623 Y COX4I1,IRF8 IRF8 COX4NB,COX4I1,LOC400550,MTHFSD IMR90 Hi-C 24141950 IRF8 9430 993 chr16 86000882 86004592 86003240 N NA NA COX4NB,MTHFSD,COX4I1,FLJ30679,FOXC2,LOC400550,C16orf74,IRF8 IMR90 Hi-C 24141950 IRF8 68108 994 chr16 86009879 86034114 86018568,86015968,86022706,86029207,86033219 N,N,N,N,N NA;NA;NA;NA;NA NA COX4NB,MTHFSD,COX4I1,FLJ30679,FOXC2,LOC400550,C16orf74,IRF8,LOC146513,LOC732275,FOXF1 IMR90 Hi-C 24141950 IRF8 77105 995 chr16 87806848 87815919 87812742,87814539,87808696 Y,N,N NA;NA;NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 7250 996 chr16 89097606 89099597 89098533 N NA NA ACSF3,CBFA2T3,LOC400558,LINC00304,CDH15 IMR90 Hi-C 24141950 CBFA2T3 54102 997 chr16 89127346 89134443 89128238 Y NA ACSF3 CBFA2T3,ACSF3,CDH15,PIEZO1,LOC400558,SLC22A31 IMR90 Hi-C 24141950 ACSF3 25774 998 chr17 1118868 1138038 1132356,1133592,1127352 N,N,N NA;NA;NA ABR ABR,INPP5K,PITPNA,SLC43A2,YWHAE,LOC100306951,BHLHA9,MYO1C,CRK,RILP,SCARF1,TUSC5 IMR90 Hi-C 24141950 ABR 28252 999 chr17 12331254 12337795 12332693,12334695,12336504 N,Y,N NA;NA;NA NA FLJ34690,MYOCD IMR90 Hi-C 24141950 ARHGAP44 355034 1000 chr17 14663348 14665057 14664141 N NA NA HS3ST3B1 IMR90 Hi-C 24141950 COX10 690629 1001 chr17 16307089 16315252 16308671,16311073 N,N NA;NA UBB,TRPV2,C17orf76-AS1 TRPV2,C17orf76-AS1 MCF7 ChIA-PET 22265404 TRPV2 3604 1002 chr17 16880133 16886331 16884378 N NA TNFRSF13B MPRIP IMR90 Hi-C 24141950 TNFRSF13B 4731 1003 chr17 16889171 16910153 16892266,16894836 N,N NA;NA TNFRSF13B,MPRIP MPRIP,FLCN IMR90 Hi-C 24141950 TNFRSF13B 13769 1004 chr17 17531343 17534048 17532091 N NA PEMT PEMT,RAI1 IMR90 Hi-C 24141950 PEMT 36349 1005 chr17 19014251 19016142 19015200 N NA GRAPL NA NA NA NA GRAPL 14640 1006 chr17 19090087 19095685 19091163,19093697 N,N NA;NA EPN2 NA NA NA NA EPN2 45005 1007 chr17 19349166 19350146 19349687 N NA NA NA NA NA NA B9D1 67671 1008 chr17 19410529 19411966 19411464 Y NA NA EPN2,SLC47A2,B9D1,ALDH3A2,ALDH3A1,ULK2 IMR90 Hi-C 24141950 B9D1 129034 1009 chr17 20434108 20438393 20435523 N NA NA NA NA NA NA CCDC144C 209621 1010 chr17 20608677 20611216 20610579 N NA NA NA NA NA NA USP22 335136 1011 chr17 20810879 20812654 20811609 N NA NA USP22 IMR90 Hi-C 24141950 USP22 133698 1012 chr17 20999741 21003606 21002957 N NA DHRS7B USP22,C17orf103 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DHRS7B 26635 1013 chr17 21177676 21180383 21179198 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 7585 1014 chr17 25674879 25682307 25676187,25680946 Y,Y LGALS9,WSB1;NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 53773 1015 chr17 26132101 26139918 26132955,26137696,26135255 N,Y,Y NA;LGALS9;NA NA NOS2 IMR90 Hi-C 24141950 C17orf108 80491 1016 chr17 28993671 28998889 28995125 N NA SUZ12P NA NA NA NA SUZ12P 37737 1017 chr17 30406111 30408398 30407008 N NA NA NA NA NA NA LRRC37B 57956 1018 chr17 30409844 30418404 30410970 N NA NA RHOT1 IMR90 Hi-C 24141950 RHOT1 51069 1019 chr17 30433881 30435013 30434439 N NA RHOT1 RHOT1 IMR90 Hi-C 24141950 RHOT1 34460 1020 chr17 33823723 33828856 33828319 N NA SLFN13,SLFN12L NLE1,UNC45B,SLC35G3 IMR90 Hi-C 24141950 SLFN12L 8965 1021 chr17 35077516 35081133 35078709 Y NA NA LHX1,AATF,ACACA,MRM1,DHRS11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MRM1 119491 1022 chr17 36133578 36135697 36134629 Y DDX52 HNF1B DDX52,HNF1B,SYNRG,LOC284100 IMR90 Hi-C 24141950 HNF1B 28482 1023 chr17 36178456 36181457 36180216 N NA NA NA NA NA NA HNF1B 73360 1024 chr17 36441717 36444225 36442681 N NA LOC440434,MRPL45 NA NA NA NA MRPL45 8764 1025 chr17 38737616 38741743 38738897 N NA CCR7 KRT14,CCR7,KRT42P,KRT222,KRT26,KRT27,RARA,WIPF2,CDC6,GJD3,TOP2A,IGFBP4,TNS4,KRT24,KRT25,KRT28,KRT9,EIF1,SMARCE1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCR7 15880 1026 chr17 38751727 38757416 38754703 N NA CCR7,SMARCE1 KRT14,KRT42P,KRT26,GJD3,TOP2A,TNS4,KRT27,KRT28,RARA,CDC6,IGFBP4,CCR7,SMARCE1,KRT222,KRT9,LOC147093,KRT17,KRT33A,KRT33B IMR90 Hi-C 24141950 CCR7 29991 1027 chr17 39820768 39825046 39823293 N NA EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 20081 1028 chr17 39831476 39836544 39832844,39835122 Y,N RAB5C,NKIRAS2,DNAJC7,DHX58,EIF1;NA EIF1 SMARCE1,KRT222,KRT28,KRT26,KRT27,TMEM99,KRT10,KRT20,KRTAP3-2,KRTAP3-3,EIF1,KRT19,HAP1,JUP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EIF1 8583 1029 chr17 41391823 41402176 41400602,41393269 N,N NA;NA TMEM106A BRCA1,NBR2,NBR1,RND2,VAT1,IFI35,RPL27,TMEM106A,LOC100130581,DHX8 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 27929 1030 chr17 41796434 41803066 41798189 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5,ARL4D,PYY IMR90 Hi-C 24141950 DUSP3 53302 1031 chr17 4276136 4282007 4279609 N NA UBE2G1 UBE2G1,ANKFY1,SPNS3,ZZEF1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 UBE2G1 6167 1032 chr17 4296507 4302390 4300264,4296937 N,N NA;NA UBE2G1 UBE2G1,SPNS3,ANKFY1,ZZEF1,CYB5D2 IMR90 Hi-C 24141950 UBE2G1 26538 1033 chr17 43405917 43408453 43406968 N NA MAP3K14 MAP3K14,FMNL1,LOC100133991,HEXIM1,ARHGAP27,TEX34 IMR90 Hi-C 24141950 MAP3K14 11503 1034 chr17 43409948 43419271 43411140 N NA MAP3K14 MAP3K14,LOC100133991,HEXIM1,FMNL1,ARHGAP27,TEX34 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K14 15534 1035 chr17 44335861 44338976 44337697 N NA KANSL1,LRRC37A MAPT,KANSL1 IMR90 Hi-C 24141950 KANSL1 33121 1036 chr17 44342905 44346049 44344336 Y NA KANSL1,LRRC37A KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LRRC37A 26448 1037 chr17 45075276 45078423 45076694 N NA NA GOSR2,RPRML,WNT9B,ITGB3 IMR90 Hi-C 24141950 GOSR2 74790 1038 chr17 45125877 45145197 45127922,45144740,45135674 N,N,N NA;NA;NA NA NPEPPS IMR90 Hi-C 24141950 CDC27 121468 1039 chr17 45277064 45279769 45277604 Y NA CDC27 CDC27,MYL4,ITGB3,C17orf57,NPEPPS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC27 10399 1040 chr17 45578981 45581746 45579927 N NA MRPL45P2,NPEPPS NPEPPS IMR90 Hi-C 24141950 MRPL45P2 8995 1041 chr17 46516304 46519912 46518014 N NA SKAP1 SKAP1,HOXB3,HOXB2,HOXB-AS3,HOXB6,MIR10A,HOXB4,HOXB8,TTLL6 IMR90 Hi-C 24141950 SKAP1 8710 1042 chr17 48905102 48907872 48906199 N NA LOC400604,TOB1 TOB1,LOC400604,SPAG9,LINC00483 IMR90 Hi-C 24141950 LOC400604 36168 1043 chr17 49008191 49009720 49008748 Y NA NA WFIKKN2,TOB1,LOC400604,LINC00483,ANKRD40,SPAG9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 62852 1044 chr17 51183003 51183869 51183614 N NA NA NA NA NA NA UTP18 1845106 1045 chr17 53314732 53316882 53315845 Y HLF NA STXBP4,HLF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MMD 182459 1046 chr17 53521320 53524543 53522493 N NA MMD PCTP IMR90 Hi-C 24141950 MMD 21979 1047 chr17 56308241 56312020 56310838 N NA MKS1 LPO,MKS1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MKS1 11275 1048 chr17 58654214 58660450 58654820 N NA PPM1D USP32,APPBP2,PPM1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPM1D 17094 1049 chr17 60175029 60178242 60176083 N NA MED13 MED13 IMR90 Hi-C 24141950 MED13 32386 1050 chr17 61538361 61540965 61539085 N NA CYB561 CYB561,ACE,MIR548W,KCNH6,DCAF7,TACO1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CYB561 14639 1051 chr17 62347467 62349781 62348428 N NA TEX2 TEX2,SNORA76,SNORD104,CD79B,SCN4A,GH1,CSHL1,CSH1,C17orf72,ICAM2,ERN1,POLG2,PECAM1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TEX2 6814 1052 chr17 62708323 62710748 62709620 N NA SMURF2 SMURF2,LOC146880 IMR90 Hi-C 24141950 SMURF2 49937 1053 chr17 62979707 62983780 62982461,62980963 Y,N DDX5,CEP95,GNA13;NA AMZ2P1 AMZ2P1,GNA13 K562,MCF7 ChIA-PET 22265404 AMZ2P1 8004 1054 chr17 63095054 63103309 63096634 N NA GNA13,RGS9 RGS9,LRRC37A3,GNA13,AMZ2P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RGS9 30147 1055 chr17 63117204 63120528 63119500 Y GNA13 RGS9 RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RGS9 12928 1056 chr17 66015451 66017686 66016144 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 14162 1057 chr17 66177405 66185471 66180079 N NA LOC440461 LOC100499466,WIPI1 IMR90 Hi-C 24141950 LOC440461 9330 1058 chr17 66755288 66757427 66755901 N NA NA FAM20A,ABCA10,ABCA9,ABCA8,PRKAR1A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKAR1A 247178 1059 chr17 67303040 67325100 67323400 N NA NA KCNJ16,UNK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABCA10 62084 1060 chr17 69968826 69972274 69971443 N NA NA NA NA NA NA SOX9 144887 1061 chr17 69999511 70003336 70001722 N NA NA LOC100499467 IMR90 Hi-C 24141950 SOX9 113825 1062 chr17 70024074 70029330 70026500 N NA NA NA NA NA NA SOX9 87831 1063 chr17 70305481 70308565 70307311 N NA NA SOX9,LOC100499467 IMR90 Hi-C 24141950 SOX9 188320 1064 chr17 70312331 70316514 70314271 N NA NA LOC100499467 IMR90 Hi-C 24141950 SOX9 195170 1065 chr17 7035122 7037801 7036228 Y TNFSF12,SAT2,POLR2A,CD68,CD68,XAF1,GABARAP,EIF5A,ACAP1 NA CLEC10A,SLC16A13,MIR497HG,BCL6B,ASGR1,ASGR2 IMR90 Hi-C 24141950 ACADVL 85352 1066 chr17 71151260 71157402 71153095 N NA SSTR2,COG1 SLC39A11,COG1 IMR90 Hi-C 24141950 SSTR2 3758 1067 chr17 72977783 72980218 72978443 Y KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L ICT1 CDR2L,ICT1,C17orf28,HN1 MCF7,K562 ChIA-PET 22265404 ICT1 28562 1068 chr17 74993127 74995867 74994428 Y SRSF2 NA MFSD11,MGAT5B,SEC14L1 IMR90 Hi-C 24141950 SEC14L1 88858 1069 chr17 75239938 75241964 75241459 N NA SEPT9 SEC14L1,SEPT9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SEPT9 35528 1070 chr17 76310922 76314431 76312506 N NA SOCS3 PGS1,DNAH17,SOCS3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS3 41727 1071 chr17 76640138 76644251 76642189 Y SOCS3,PGS1,USP36,ENGASE,CYTH1 NA DNAH17,CYTH1 IMR90 Hi-C 24141950 CYTH1 134125 1072 chr17 77781864 77785410 77784128 Y CBX2,CBX8 CBX2,CBX8,CBX4 NA NA NA NA CBX8 10949 1073 chr17 7892726 7895919 7893415 N NA NA CHD3,EFNB3,DNAH2,KDM6B,CNTROB,KCNAB3,TRAPPC1,GUCY2D,ALOX15B,LOC284023 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CNTROB 57284 1074 chr17 79309283 79319542 79317941 Y FAM195B,C17orf70,ACTG1,BAHCC1 SLC38A10 ACTG1,SLC38A10,LINC00482,TMEM105,MIR4740,BAHCC1,C17orf70,FSCN2,C17orf56,C17orf89,MIR3186,NPLOC4 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 SLC38A10 40187 1075 chr17 79924137 79927055 79925942 Y TSPAN10 SIRT7,MAFG,MAFG-AS1,PYCR1,ASPSCR1 ASPSCR1 K562,MCF7 ChIA-PET 22265404 ASPSCR1 8371 1076 chr18 11946259 11950593 11947588 Y CHMP1B MPPE1,IMPA2 IMPA2,GNAL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IMPA2 30834 1077 chr18 20650147 20652183 20651468 Y C18orf8 NA RIOK3,CABLES1,TMEM241 IMR90 Hi-C 24141950 CABLES1 62345 1078 chr18 23793749 23796716 23795710 N NA TAF4B NA NA NA NA TAF4B 9693 1079 chr18 29302963 29305093 29304383 N NA B4GALT6 NA NA NA NA B4GALT6 38277 1080 chr18 33156171 33161523 33157068,33160884 N,N NA;NA NA NA NA NA NA GALNT1 73010 1081 chr18 36190068 36192434 36191433 N NA NA NA NA NA NA TPGS2 1780910 1082 chr18 43354324 43358898 43355412 N NA NA SLC14A1,EPG5,SIGLEC15 IMR90 Hi-C 24141950 EPG5 188407 1083 chr18 45205739 45207892 45206768 N NA NA NA NA NA NA SMAD2 249623 1084 chr18 46422562 46425034 46423319 Y SMAD7 NA SMAD7 MCF7 ChIA-PET 22265404 SMAD7 52047 1085 chr18 46500149 46505314 46502135 N NA SMAD7 SMAD7,CTIF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SMAD7 23068 1086 chr18 47823465 47826683 47824449 Y CCDC11,MBD1,MBD1 MBD1,CXXC1 CCDC11 IMR90 Hi-C 24141950 CXXC1 8773 1087 chr18 47832494 47838205 47834770 Y NA MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 17802 1088 chr18 47840439 47843845 47841927 N NA MBD1,CXXC1 CCDC11 IMR90 Hi-C 24141950 CXXC1 25747 1089 chr18 47882198 47884745 47883149 N NA SKA1 NA NA NA NA SKA1 16647 1090 chr18 48358290 48360245 48359267 N NA ME2 NA NA NA NA ME2 45187 1091 chr18 49180511 49182643 49181518 N NA NA NA NA NA NA MEX3C 456460 1092 chr18 49253466 49255731 49254312 N NA NA NA NA NA NA MEX3C 529415 1093 chr18 51772044 51775173 51773627 Y NA MBD2,POLI POLI MCF7 ChIA-PET 22265404 POLI 20676 1094 chr18 52731316 52733615 52732192 N NA NA NA NA NA NA C18orf54 846145 1095 chr18 54744095 54746024 54745203 Y NA NA NA NA NA NA WDR7 425479 1096 chr18 54751117 54753411 54751963 N NA NA NA NA NA NA WDR7 432501 1097 chr18 55499494 55501907 55500968 N NA NA NEDD4L,ATP8B1,LOC100505549 IMR90 Hi-C 24141950 LOC100505549 201960 1098 chr18 55512122 55512835 55512269 N NA NA ATP8B1,NEDD4L,ALPK2 IMR90 Hi-C 24141950 LOC100505549 214588 1099 chr18 57541832 57544355 57542762 N NA PMAIP1 PMAIP1,CCBE1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 PMAIP1 22837 1100 chr18 57548057 57551479 57549432 N NA PMAIP1 PMAIP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PMAIP1 15713 1101 chr18 57636926 57639028 57636970 N NA NA PMAIP1 IMR90 Hi-C 24141950 PMAIP1 69734 1102 chr18 60087225 60089346 60088054 Y KIAA1468,ZCCHC2 NA PHLPP1,ZCCHC2,TNFRSF11A,BCL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZCCHC2 101312 1103 chr18 60169569 60174731 60173715 Y KIAA1468,ZCCHC2 ZCCHC2 ZCCHC2 MCF7 ChIA-PET 22265404 ZCCHC2 15927 1104 chr18 60317879 60320758 60318790 N NA NA ZCCHC2,PHLPP1,BCL2 IMR90 Hi-C 24141950 PHLPP1 61914 1105 chr18 60705315 60709244 60708513 N NA NA NA NA NA NA BCL2 277369 1106 chr18 60764708 60767982 60765716 N NA NA NA NA NA NA BCL2 218631 1107 chr18 61693985 61696967 61695544 N NA NA NA NA NA NA SERPINB8 56722 1108 chr18 77384341 77389861 77385398 Y PQLC1,ADNP2,NFATC1,NFATC1,CTDP1 CTDP1 NFATC1,ATP9B IMR90 Hi-C 24141950 CTDP1 49940 1109 chr18 8600268 8606131 8601567,8604378 N,N NA;NA RAB12 NA NA NA NA RAB12 3312 1110 chr18 9016363 9018895 9017697 Y NA NA CCDC165,ANKRD12,RALBP1 IMR90 Hi-C 24141950 NDUFV2 83733 1111 chr18 9060282 9063513 9062274 N NA NDUFV2 CCDC165,NDUFV2,ANKRD12,PPP4R1,RALBP1 IMR90 Hi-C 24141950 NDUFV2 39115 1112 chr18 9064888 9071872 9067036,9069852 Y,Y NA;ANKRD12,ANKRD12 NDUFV2 CCDC165,NDUFV2,ANKRD12,PPP4R1,RALBP1,RAB12,TWSG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NDUFV2 30756 1113 chr18 9082169 9083916 9083182 N NA NDUFV2 ANKRD12,RALBP1,TWSG1,NDUFV2,CCDC165,PPP4R1 IMR90 Hi-C 24141950 NDUFV2 18712 1114 chr18 9094267 9096337 9095447 Y RALBP1,ANKRD12,ANKRD12 NDUFV2,ANKRD12 RALBP1,TWSG1,NDUFV2,CCDC165,ANKRD12 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDUFV2 6291 1115 chr18 9432645 9437440 9433983 N NA RALBP1 ANKRD12,TWSG1,CCDC165 IMR90 Hi-C 24141950 RALBP1 38090 1116 chr18 9647424 9650556 9648979 Y PPP4R1 PPP4R1 PPP4R1,VAPA,ANKRD12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PPP4R1 32824 1117 chr19 12605254 12607513 12606222 N NA ZNF709 ZNF709,ZNF823,ZNF491,ZNF441,ZNF439,ZNF433,ZNF878,ZNF788,ZNF844,ZNF20,ZNF625-ZNF20,ZNF44,ZNF563,ZNF442,ZNF443,ZNF564 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF709 9622 1118 chr19 13840975 13844639 13842549 N NA CCDC130,MRI1,C19orf53 CACNA1A IMR90 Hi-C 24141950 CCDC130 14114 1119 chr19 14355886 14364589 14359401 N NA NA LOC100507373 IMR90 Hi-C 24141950 LOC100507373 107922 1120 chr19 14419974 14424542 14421426 N NA NA NA NA NA NA CD97 67414 1121 chr19 14462630 14468389 14466954 N NA CD97 LPHN1,ASF1B,LOC100507373,DDX39A,CD97 IMR90 Hi-C 24141950 CD97 23567 1122 chr19 14472952 14476610 14474588 N NA CD97 CD97,DDX39A K562 ChIA-PET 22265404 CD97 15346 1123 chr19 14479000 14482968 14480923 Y ZNF333,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,DDX39A,CD97 CD97,DDX39A NA NA NA NA CD97 8988 1124 chr19 15722649 15723532 15723178 N NA NA NA NA NA NA RASAL3 147267 1125 chr19 16111483 16113925 16112915 N NA NA NA NA NA NA RAB8A 108565 1126 chr19 1656394 1683568 1665647,1661122,1668367,1671962 N,N,N,N NA;NA;NA;NA TCF3 TCF3,ONECUT3,REXO1,LOC100288123,ATP8B3,PLK5 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 TCF3 4066 1127 chr19 20069434 20070581 20069711 N NA NA NA NA NA NA ZNF93 57712 1128 chr19 20161222 20164781 20163195 Y ZNF506,ZNF253,ZNF682,ZNF682 NA ZNF682,LOC284440 MCF7 ChIA-PET 22265404 ZNF93 149500 1129 chr19 20958752 20960534 20959289 N NA NA NA NA NA NA ZNF85 145525 1130 chr19 21751205 21752766 21751970 N NA NA NA NA NA NA ZNF429 62768 1131 chr19 23257647 23266579 23258175 N NA NA NA NA NA NA ZNF724P 166593 1132 chr19 23298918 23301549 23300061 N NA NA NA NA NA NA ZNF724P 131623 1133 chr19 23455572 23458362 23456927 N NA ZNF724P NA NA NA NA ZNF724P 22400 1134 chr19 24214748 24251433 24218211,24216429 N,N NA;NA ZNF254 NA NA NA NA ZNF254 18543 1135 chr19 2459450 2467406 2461935 N NA TIMM13,LMNB2,GADD45B LMNB2,GADD45B MCF7,K562 ChIA-PET 22265404 LMNB2 2492 1136 chr19 2468175 2472892 2469574 N NA TIMM13,LMNB2,GADD45B GADD45B MCF7,K562 ChIA-PET 22265404 GADD45B 3231 1137 chr19 28510183 28513904 28512228 N NA NA NA NA NA NA LOC148189 225335 1138 chr19 28556120 28568512 28559025,28561870,28563476,28557991,28565719 N,N,N,N,N NA;NA;NA;NA;NA NA NA NA NA NA LOC148189 271272 1139 chr19 29352608 29354991 29353565 N NA NA NA NA NA NA UQCRFS1 349145 1140 chr19 29358592 29363052 29360146 N NA NA NA NA NA NA UQCRFS1 341084 1141 chr19 3065534 3072952 3065977 N NA TLE2,AES,GNA11 AES,TLE2,GNA11,S1PR4,GNA15,NCLN K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AES 2570 1142 chr19 34625023 34626768 34625403 N NA LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 36584 1143 chr19 36191425 36195669 36193425 Y USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33 UPK1A,ZBTB32,MLL4,IGFLR1,U2AF1L4,PSENEN,LIN37 MLL4,ZBTB32 K562 ChIA-PET 22265404 ZBTB32 8161 1144 chr19 37707506 37710510 37708917 N NA ZNF585A,ZNF383 ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF383 6856 1145 chr19 40047830 40050690 40049254 N NA EID2B,EID2 DLL3,EID2,EID2B,LGALS16,LGALS17A,CLC,LEUTX,ZNF780A IMR90 Hi-C 24141950 EID2 16992 1146 chr19 40072189 40075774 40073426 N NA EID2B,EID2 LGALS17A IMR90 Hi-C 24141950 EID2 41351 1147 chr19 40444960 40450218 40447559 Y SERTAD1,ZNF546,FCGBP PSMC4 LEUTX,FCGBP IMR90 Hi-C 24141950 PSMC4 26855 1148 chr19 40621941 40624286 40623064 N NA ZNF780A FCGBP,TTC9B,CNTD2,MAP3K10 IMR90 Hi-C 24141950 ZNF780A 25096 1149 chr19 40643848 40656443 40649911,40653629 N,N NA;NA ZNF780A,MAP3K10 FCGBP,TTC9B,CNTD2,MAP3K10,ZNF546,ZNF780A,AKT2,ZNF780B,SPTBN4 IMR90 Hi-C 24141950 MAP3K10 41208 1150 chr19 42026783 42029200 42028331 Y NA NA CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 53331 1151 chr19 42034757 42036798 42034922 N NA CEACAM21 LOC100505495,C19orf69,ATP5SL,CEACAM21,B3GNT8 IMR90 Hi-C 24141950 CEACAM21 45733 1152 chr19 42040514 42067396 42041739,42052489,42055815,42058435 N,N,N,N NA;NA;NA;NA CEACAM21 LOC100505495,B3GNT8,C19orf69,ATP5SL,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 15135 1153 chr19 42969709 42971622 42970429 N NA LIPE CXCL17,LIPE,CEACAM1,CEACAM8 IMR90 Hi-C 24141950 LIPE 38131 1154 chr19 44204812 44207326 44205596 N NA PLAUR SMG9,LYPD5,PLAUR,IRGC,KCNN4 IMR90 Hi-C 24141950 PLAUR 30314 1155 chr19 44710199 44713080 44711608 Y NA ZNF226,ZNF227 NA NA NA NA ZNF227 3611 1156 chr19 45941280 45955532 45943908,45947226,45954351 N,N,Y NA;NA;NA CD3EAP,PPP1R13L,ERCC1,FOSB,RTN2,PPM1N ERCC1,PPM1N,RTN2,VASP,FOSB,CD3EAP,PPP1R13L,LOC100287177,EML2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ERCC1 14103 1157 chr19 46634491 46638327 46636626 N NA NA NOVA2,IGFL3,IGFL2,DKFZp434J0226,IGFL1,LOC100506012 IMR90 Hi-C 24141950 CCDC61 136152 1158 chr19 47358886 47376505 47363872,47365571 Y,N PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35;NA AP2S1,ARHGAP35 AP2S1,SLC1A5,MIR3190,BBC3,ARHGAP35,ZC3H4,CCDC9,FKRP,STRN4,NPAS1,TMEM160,SAE1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AP2S1 4683 1159 chr19 48101583 48105944 48103714 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLTSCR1 5509 1160 chr19 484540 491150 489074 N NA TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 TPGS1 16347 1161 chr19 53398969 53402524 53400708 N NA ZNF468,ZNF320,ZNF321P ZNF468,ZNF160 IMR90 Hi-C 24141950 ZNF320 4370 1162 chr19 55469955 55472344 55470366 N NA NLRP2 NA NA NA NA NLRP2 4308 1163 chr19 56645125 56646863 56645515 N NA ZNF787,ZNF444 ZNF787,ZNF444 MCF7,K562 ChIA-PET 22265404 ZNF444 5672 1164 chr19 6514914 6519192 6516707 N NA DENND1C,TNFSF9 TNFSF9 K562 ChIA-PET 22265404 TNFSF9 11818 1165 chr19 6521314 6523962 6522270 N NA DENND1C,TNFSF9 TNFSF9 K562 ChIA-PET 22265404 TNFSF9 7048 1166 chr19 7395893 7402206 7398649 N NA NA INSR,ZNF557 IMR90 Hi-C 24141950 ARHGEF18 57793 1167 chr19 7408315 7427375 7410132,7414063,7423495,7415333 N,N,N,N NA;NA;NA;NA ARHGEF18 ZNF557,INSR,ARHGEF18,PNPLA6,MCOLN1,ZNF358,C19orf45,CD209,CLEC4G IMR90 Hi-C 24141950 ARHGEF18 32624 1168 chr19 7878590 7882343 7880340,7881937 N,N NA;NA EVI5L ARHGEF18,CAMSAP3,CD209,CLEC4GP1,EVI5L,LRRC8E IMR90 Hi-C 24141950 EVI5L 12818 1169 chr19 8257153 8261527 8259882,8257463,8257476 N,N,N NA;NA;NA CERS4 TIMM44,FBN3,ELAVL1,CCL25 IMR90 Hi-C 24141950 CERS4 12690 1170 chr19 9418995 9421453 9419705,9420518 N,Y NA;NA ZNF699,ZNF559-ZNF177 NA NA NA NA ZNF699 3200 1171 chr19 9894664 9896704 9896456 Y ZNF266,COL5A3,ZNF846 FBXL12,UBL5,PIN1 NA NA NA NA FBXL12 33027 1172 chr2 10229366 10234837 10231692 N NA CYS1,RRM2,C2orf48 GRHL1,HPCAL1,NOL10,YWHAQ,RRM2,ODC1,KLF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CYS1 8828 1173 chr2 113448189 113451963 113450256 Y IL36B,IL36G,PSD4,IL1RN,IL1B,IL1A FLJ42351,SLC20A1 SLC20A1,FLJ42351,POLR1B,CHCHD5,CKAP2L MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC20A1 44755 1174 chr2 113456886 113460637 113458806 Y NA NA FLJ42351,SLC20A1,IL37,POLR1B,CHCHD5,CKAP2L,IL1B IMR90 Hi-C 24141950 SLC20A1 53452 1175 chr2 113462319 113467849 113463994,113465891 N,Y NA;IL36B,IL36G,IL1RN,IL1B,IL1A NA FLJ42351,SLC20A1,IL37,POLR1B,CHCHD5,CKAP2L,IL1B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CKAP2L 54405 1176 chr2 113560654 113565307 113562236 N NA CKAP2L,IL1B CKAP2L IMR90 Hi-C 24141950 IL1B 29049 1177 chr2 113636657 113640240 113638220 N NA IL1B CKAP2L,IL1A,IL1B,IL37 IMR90 Hi-C 24141950 IL1B 42301 1178 chr2 113914110 113915996 113914999 N NA PSD4 IL1RN,LOC654433,PAX8,PSD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSD4 15564 1179 chr2 118940381 118945194 118943615 N NA NA NA NA NA NA INSIG2 94331 1180 chr2 118981067 118982821 118981834 N NA NA EN1 IMR90 Hi-C 24141950 INSIG2 135017 1181 chr2 123496396 123523888 123503266,123501080 N,N NA;NA NA NA NA NA NA TSN 983275 1182 chr2 126154279 126158301 126155036,126157166 N,N NA;NA NA NA NA NA NA GYPC 1255210 1183 chr2 126384817 126402751 126401339 N NA NA NA NA NA NA GYPC 1010760 1184 chr2 128120611 128147166 128145700 N NA MAP3K2 IWS1,ERCC3,MAP3K2,MIR4783,PROC,CYP27C1 IMR90 Hi-C 24141950 MAP3K2 19806 1185 chr2 131554907 131556155 131555405 N NA NA PLEKHB2,FAM168B K562,MCF7 ChIA-PET 22265404 FAM168B 294849 1186 chr2 132439160 132441376 132440026 N NA C2orf27A NA NA NA NA C2orf27A 38688 1187 chr2 134875761 134877368 134876249 N NA NA NA NA NA NA MGAT5 134462 1188 chr2 13661261 13665159 13662750,13664762 N,N NA;NA NA NA NA NA NA LPIN1 1774521 1189 chr2 136808286 136811718 136809527 N NA NA CXCR4 IMR90 Hi-C 24141950 CXCR4 64007 1190 chr2 136816131 136818346 136816918 Y NA NA NA NA NA NA CXCR4 57379 1191 chr2 136963685 136965929 136964728 N NA NA NA NA NA NA CXCR4 87960 1192 chr2 137138046 137140954 137139934 Y CXCR4,CXCR4 NA NA NA NA NA CXCR4 262321 1193 chr2 143622341 143627657 143623820,143626117 N,Y NA;KYNU KYNU KYNU MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KYNU 7538 1194 chr2 143630679 143633136 143631897 N NA KYNU NA NA NA NA KYNU 2059 1195 chr2 144559651 144561402 144560803 N NA NA ARHGAP15 IMR90 Hi-C 24141950 GTDC1 528681 1196 chr2 145114893 145118547 145116820 Y NA GTDC1 ZEB2,ARHGAP15,GTDC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GTDC1 24810 1197 chr2 147937705 147941633 147939674 N NA NA NA NA NA NA MBD5 836947 1198 chr2 148391935 148395275 148393583 N NA NA NA NA NA NA MBD5 383305 1199 chr2 152617064 152624380 152622422 N NA NA ARL5A K562 ChIA-PET 22265404 ARL5A 60629 1200 chr2 157196002 157201069 157198333 N NA NA GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GPD2 90896 1201 chr2 157256586 157258316 157257471 N NA GPD2 NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GPD2 33649 1202 chr2 158101936 158104268 158103112 Y NA NA NR4A2,GALNT5 IMR90 Hi-C 24141950 CYTIP 196336 1203 chr2 158308577 158311461 158310268 Y CYTIP CYTIP NA NA NA NA CYTIP 7973 1204 chr2 158322145 158330504 158323365,158325562,158327188 N,Y,N NA;CYTIP;NA CYTIP NA NA NA NA CYTIP 21541 1205 chr2 158335131 158344057 158336829 N NA CYTIP ACVR1C,UPP2 IMR90 Hi-C 24141950 CYTIP 34527 1206 chr2 161933467 161935635 161934441 Y TANK,TANK NA ITGB6 IMR90 Hi-C 24141950 TANK 57831 1207 chr2 161946580 161947957 161947368 N NA TANK PLA2R1,RBMS1,TANK IMR90 Hi-C 24141950 TANK 45509 1208 chr2 161949630 161955100 161952385 N NA TANK TANK,ITGB6,RBMS1,LY75-CD302 IMR90 Hi-C 24141950 TANK 38366 1209 chr2 168147976 168149718 168149191 N NA NA NA NA NA NA CERS6 1163041 1210 chr2 172365653 172367543 172366650 N NA CYBRD1 CYBRD1 K562 ChIA-PET 22265404 CYBRD1 11323 1211 chr2 172369616 172372360 172370506 N NA CYBRD1 NA NA NA NA CYBRD1 6506 1212 chr2 173396444 173403247 173401982 N NA PDK1 NA NA NA NA PDK1 17532 1213 chr2 178028185 178032815 178030591 N NA HNRNPA3 HOXD-AS2,LOC100130691,AGPS,PDE11A,NFE2L2,HNRNPA3,TTC30A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNRNPA3 44607 1214 chr2 178033950 178036159 178034730 N NA HNRNPA3 LOC100130691,AGPS,NFE2L2,HNRNPA3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNRNPA3 41263 1215 chr2 181991768 182035400 182007418,182030259,181992910 N,N,N NA;NA;NA NA ITGA4,CERKL IMR90 Hi-C 24141950 UBE2E3 146656 1216 chr2 182175395 182211040 182177315,182179429 Y,N ITGA4;NA NA ITGA4 IMR90 Hi-C 24141950 ITGA4 110579 1217 chr2 182274561 182278832 182275940 N NA ITGA4 NA NA NA NA ITGA4 42787 1218 chr2 184856516 184859001 184857976 N NA NA NA NA NA NA ZNF804A 604092 1219 chr2 184861536 184864306 184862711 N NA NA NA NA NA NA ZNF804A 598787 1220 chr2 184868471 184871209 184869868 N NA NA NA NA NA NA ZNF804A 591884 1221 chr2 190816096 190818836 190817446 N NA NA PMS1,HIBCH,C2orf88 IMR90 Hi-C 24141950 ORMDL1 166999 1222 chr2 191446769 191451318 191448447 N NA TMEM194B TMEM194B,NAB1,INPP1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM194B 47301 1223 chr2 191582246 191589120 191583616,191587144 Y,N STAT4,NAB1;NA NA NAB1,GLS,PMS1,MFSD6,TMEM194B,STAT1 IMR90 Hi-C 24141950 NAB1 68398 1224 chr2 19425993 19430075 19428529 N NA NA MIR4757,TTC32 IMR90 Hi-C 24141950 FLJ12334 638540 1225 chr2 196423144 196428156 196424559,196426642 Y,Y SLC39A10;NA NA SLC39A10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC39A10 93376 1226 chr2 196514272 196516665 196514933 N NA SLC39A10 SLC39A10 MCF7 ChIA-PET 22265404 SLC39A10 4867 1227 chr2 196965492 196968514 196966602 N NA NA HECW2,STK17B IMR90 Hi-C 24141950 STK17B 67822 1228 chr2 198187414 198190984 198188103 N NA ANKRD44 NA NA NA NA ANKRD44 11893 1229 chr2 20344813 20347404 20345857 N NA NA PUM2,WDR35,MATN3,SDC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDC1 77790 1230 chr2 203472580 203475930 203473400,203474616 N,Y NA;NA FAM117B ICA1L,FAM117B,WDR12,NBEAL1,ALS2CR8,CYP20A1 IMR90 Hi-C 24141950 FAM117B 23971 1231 chr2 20564156 20566923 20565162 Y TTC32,HS1BP3 PUM2 PUM2,HS1BP3 IMR90 Hi-C 24141950 PUM2 37012 1232 chr2 20623756 20625968 20624786 Y HS1BP3 RHOB HS1BP3,RHOB,PUM2 IMR90 Hi-C 24141950 RHOB 20867 1233 chr2 20723670 20726346 20724896 N NA NA HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOB 76835 1234 chr2 20775097 20782058 20776594,20778788 Y,Y HS1BP3;NA NA HS1BP3,RHOB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 68806 1235 chr2 20793788 20797163 20795583 N NA NA HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 53701 1236 chr2 208148853 208152224 208150665 N NA NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 118239 1237 chr2 208174067 208177396 208176425 Y CREB1,CCNYL1 NA KLF7,CREB1 IMR90 Hi-C 24141950 KLF7 143453 1238 chr2 208192349 208206381 208199705,208202023,208193993 Y,N,N KLF7;NA;NA NA KLF7,CREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 161735 1239 chr2 208366597 208369394 208368223 Y CREB1 CREB1 KLF7,CREB1,METTL21A,CCNYL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CREB1 25222 1240 chr2 214091062 214094375 214092382 N NA NA NA NA NA NA IKZF2 74729 1241 chr2 214095471 214111379 214097741,214102097,214108280 N,N,Y NA;NA;IKZF2 NA ABCA12,IKZF2,BARD1,SPAG16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IKZF2 79138 1242 chr2 217469546 217473935 217471575 N NA NA DIRC3,MARCH4,RPL37A,IGFBP2,TNS1,PKI55 IMR90 Hi-C 24141950 RPL37A 106026 1243 chr2 220548260 220553552 220549990 N NA NA INHA,OBSL1,SLC4A3,STK11IP,EPHA4,DES,SPEG,GMPPA,ACCN4 IMR90,HELA,K562,GM12878,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 STK11IP 85664 1244 chr2 223598794 223600193 223599063 N NA NA NA NA NA NA FARSB 77967 1245 chr2 228318074 228332238 228324865,228328259 N,N NA;NA AGFG1 AGFG1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AGFG1 4650 1246 chr2 228646090 228649765 228648287 Y AGFG1,CCL20 NA DNER,AGFG1 IMR90 Hi-C 24141950 AGFG1 309202 1247 chr2 231441123 231458878 231443031,231447885,231454427,231456736 N,N,N,N NA;NA;NA;NA NA SP140,SP140L,SP100,CAB39,FBXO36,SLC16A14,SP110 IMR90 Hi-C 24141950 CAB39 118679 1248 chr2 231461183 231469140 231465667,231467624 N,N NA;NA NA SP140,SP110,CAB39,SP100,SP140L IMR90 Hi-C 24141950 CAB39 108417 1249 chr2 231478340 231482530 231479838 Y GPR55,SP110,SP140 NA CAB39,SP140,FBXO36,SLC16A14,SP110,SP140L,SP100,ITM2C,SPATA3,LOC348761,LOC151475 IMR90 Hi-C 24141950 CAB39 95027 1250 chr2 231507493 231510867 231508587 N NA NA CAB39,SP140L,SP110 IMR90 Hi-C 24141950 CAB39 66690 1251 chr2 231517450 231527843 231524124,231522069 Y,N GPR55,SP110,SP140,SP140L,CAB39;NA CAB39 CAB39,SP110,LOC151475 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CAB39 49714 1252 chr2 231530210 231535369 231533009 N NA CAB39 CAB39 IMR90 Hi-C 24141950 CAB39 42188 1253 chr2 231805797 231814453 231812753,231809046 Y,N GPR55;NA GPR55 ITM2C,LOC151484,GPR55,LOC348761,SPATA3,CAB39,C2orf72 IMR90 Hi-C 24141950 GPR55 15856 1254 chr2 231816105 231827651 231818320,231822072 N,N NA;NA GPR55 CAB39,LOC151484,GPR55,SPATA3,C2orf72,ITM2C,LOC348761 IMR90 Hi-C 24141950 GPR55 26164 1255 chr2 232417056 232436271 232419453,232422718 N,N NA;NA LINC00471 NCL,SNORD20,SNORA75,NMUR1,LINC00471,PTMA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00471 38006 1256 chr2 232506625 232509437 232507882 N NA NA PDE6D IMR90 Hi-C 24141950 PTMA 63798 1257 chr2 232525010 232543183 232527149,232531204,232537282,232540060 Y,Y,Y,N DIS3L2;NA;DIS3L2,PTMA;NA PTMA COPS7B,PTMA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTMA 30052 1258 chr2 232543696 232547830 232545780 Y COPS7B PTMA PTMA,PDE6D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTMA 25405 1259 chr2 232550932 232553747 232552112 Y NPPC PTMA PTMA,PDE6D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTMA 19488 1260 chr2 237444793 237469658 237462443,237455518,237447139 N,N,Y NA;NA;NA CXCR7 IQCA1,CXCR7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CXCR7 8722 1261 chr2 237963663 237967717 237966718 N NA COPS8 IQCA1,AGAP1,ASB18,CXCR7 IMR90 Hi-C 24141950 COPS8 26367 1262 chr2 242907893 242910658 242908310 N NA NA LOC728323 IMR90 Hi-C 24141950 PDCD1 106835 1263 chr2 24712084 24716187 24713942,24715479 N,N NA;NA NA CENPO,NCOA1 IMR90 Hi-C 24141950 NCOA1 91159 1264 chr2 24731844 24757058 24732588 N NA NA ADCY3,CENPO,NCOA1,PTRHD1 IMR90 Hi-C 24141950 NCOA1 50288 1265 chr2 25427015 25428996 25427354 N NA POMC,DNMT3A ADCY3,DNAJC27-AS1,DNAJC27,EFR3B,DNMT3A IMR90 Hi-C 24141950 POMC 35456 1266 chr2 2616860 2618401 2617336 Y NA NA NA NA NA NA TSSC1 763252 1267 chr2 26250852 26252508 26251179 N NA RAB10 RAB10 MCF7 ChIA-PET 22265404 RAB10 4221 1268 chr2 2904539 2906239 2905381 N NA NA MYT1L IMR90 Hi-C 24141950 TSSC1 475414 1269 chr2 29331890 29334798 29333347 N NA CLIP4 NA NA NA NA CLIP4 3510 1270 chr2 30555131 30557736 30556025 N NA NA LCLAT1,LBH IMR90 Hi-C 24141950 LBH 100734 1271 chr2 30558431 30562705 30560060 Y YPEL5 NA LCLAT1,LBH IMR90 Hi-C 24141950 LBH 104034 1272 chr2 37775352 37778285 37777191 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 121041 1273 chr2 37796990 37803705 37798563,37801391 N,N NA;NA NA CDC42EP3,QPCT IMR90 Hi-C 24141950 CDC42EP3 95621 1274 chr2 37811587 37815455 37812877 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 83871 1275 chr2 38076595 38080342 38079125 N NA NA CDC42EP3,QPCT,PRKD3 IMR90 Hi-C 24141950 FAM82A1 97254 1276 chr2 38100674 38104523 38101819 N NA NA CDC42EP3,QPCT,PRKD3,SULT6B1 IMR90 Hi-C 24141950 FAM82A1 73073 1277 chr2 38117954 38121401 38119633,38118183 N,N NA;NA NA CDC42EP3,QPCT,PRKD3,FAM82A1 IMR90 Hi-C 24141950 FAM82A1 56195 1278 chr2 38149556 38174098 38152609,38161812,38155704 N,N,N NA;NA;NA FAM82A1 CDC42EP3,PRKG2,CYP1B1-AS1,FAM82A1,ATL2,CYP1B1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 FAM82A1 3498 1279 chr2 38322012 38328866 38323690,38326551 Y,N CDC42EP3,CYP1B1;NA CYP1B1 CYP1B1,FAM82A1,CYP1B1-AS1,HNRPLL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CYP1B1 18689 1280 chr2 38335664 38340229 38336726 N NA CYP1B1 FAM82A1,CYP1B1,CYP1B1-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CYP1B1 32341 1281 chr2 38486306 38492541 38489264,38489318,38488462 N,N,N NA;NA;NA NA FAM82A1,CYP1B1-AS1,CYP1B1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATL2 111891 1282 chr2 38664391 38668271 38666172 N NA NA ATL2,GALM,FAM82A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATL2 59959 1283 chr2 38759678 38761983 38760566 N NA NA ATL2,HNRPLL,GALM,SRSF7,DHX57 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HNRPLL 68195 1284 chr2 38845014 38847859 38847050 N NA HNRPLL,GALM GALM,HNRPLL,ATL2,SRSF7 IMR90 Hi-C 24141950 HNRPLL 14836 1285 chr2 38860817 38863533 38862049 N NA HNRPLL,GALM GALM,HNRPLL,SRSF7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GALM 29519 1286 chr2 38878677 38881853 38879908 N NA HNRPLL,GALM GALM,HNRPLL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GALM 11199 1287 chr2 39134080 39137277 39135532 N NA DHX57 DHX57,ARHGEF33 IMR90 Hi-C 24141950 DHX57 31059 1288 chr2 39349721 39352995 39351535 N NA SOS1 NA NA NA NA SOS1 2117 1289 chr2 42253592 42257616 42256019 N NA PKDCC LOC388942,C2orf91,PKDCC,EML4 IMR90 Hi-C 24141950 PKDCC 17545 1290 chr2 42323814 42342731 42329743,42325856,42332961 Y,Y,N NA;EML4;NA PKDCC EML4,LOC388942,COX7A2L IMR90 Hi-C 24141950 PKDCC 48653 1291 chr2 42344171 42346896 42345486 N NA EML4 EML4,LOC388942,COX7A2L IMR90 Hi-C 24141950 EML4 49594 1292 chr2 42351949 42357603 42355692 N NA EML4 EML4,COX7A2L,LOC388942 IMR90 Hi-C 24141950 EML4 38887 1293 chr2 42359194 42361482 42360319 Y EML4 EML4 EML4,COX7A2L,LOC388942 IMR90 Hi-C 24141950 EML4 35008 1294 chr2 43034886 43039213 43038119 N NA OXER1,HAAO THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HAAO 15135 1295 chr2 43188425 43191557 43189359 N NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HAAO 168674 1296 chr2 43332955 43333892 43333315 N NA NA THADA,ZFP36L2,LOC100129726 IMR90 Hi-C 24141950 ZFP36L2 119853 1297 chr2 43384735 43387134 43386149 Y OXER1,ZFP36L2 NA THADA,LOC100129726,ZFP36L2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 66611 1298 chr2 43400416 43403450 43401742 Y OXER1,THADA,THADA,ZFP36L2 NA LOC100129726,ZFP36L2,THADA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 50295 1299 chr2 46455778 46458257 46457183 N NA NA PRKCE,EPAS1,PIGF IMR90 Hi-C 24141950 ATP6V1E2 288839 1300 chr2 46760443 46763591 46762305 N NA ATP6V1E2,RHOQ PIGF,CRIPT,RHOQ IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOQ 6276 1301 chr2 47498662 47502048 47499533 N NA NA TTC7A,CALM2,SOCS5,MCFD2,C2orf61 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CALM2 94922 1302 chr2 47527281 47531019 47528338 N NA NA TTC7A,CALM2,MCFD2,C2orf61,EPCAM IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MSH2 99244 1303 chr2 47881357 47884055 47882447 N NA NA MSH2,EPCAM,KCNK12 IMR90 Hi-C 24141950 MSH6 126166 1304 chr2 47949587 47953331 47951652 N NA NA KCNK12,MSH2 IMR90 Hi-C 24141950 MSH6 56890 1305 chr2 48337743 48341051 48338819 N NA NA FOXN2,FBXO11,PPP1R21,STON1-GTF2A1L,MSH6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXN2 200744 1306 chr2 49456647 49457620 49456876 N NA NA NA NA NA NA PPP1R21 788739 1307 chr2 54324451 54326066 54324953 N NA NA EML6,SPTBN1,PSME4,RTN4 IMR90 Hi-C 24141950 PSME4 126474 1308 chr2 55359636 55362530 55360783 N NA NA RTN4,C2orf63,EML6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RTN4 81902 1309 chr2 58104506 58110846 58105647,58109936 Y,N NA;NA NA FLJ30838 IMR90 Hi-C 24141950 VRK2 162931 1310 chr2 58134287 58138060 58136077 Y VRK2,VRK2,VRK2 NA FANCL IMR90 Hi-C 24141950 VRK2 135717 1311 chr2 58248979 58252434 58251152 N NA VRK2 VRK2 K562,MCF7 ChIA-PET 22265404 VRK2 21343 1312 chr2 58257644 58260775 58259670 N NA VRK2 NA NA NA NA VRK2 13002 1313 chr2 58264807 58267859 58266449 Y NA VRK2 NA NA NA NA VRK2 5918 1314 chr2 60277769 60280324 60279125 N NA NA NA NA NA NA BCL11A 500309 1315 chr2 60577679 60582511 60579813 N NA NA NA NA NA NA BCL11A 198122 1316 chr2 61897274 61900863 61898706,61898190 N,N NA;NA NA XPO1,FAM161A IMR90 Hi-C 24141950 XPO1 131856 1317 chr2 61989927 61992932 61991547 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCT4 122874 1318 chr2 62413595 62419739 62416265 N NA B3GNT2 B3GNT2,COMMD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 B3GNT2 3523 1319 chr2 62519738 62523064 62520863 N NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 96476 1320 chr2 62529360 62543534 62537053,62531069,62541132 Y,N,N NA;NA;NA NA COMMD1 IMR90 Hi-C 24141950 B3GNT2 106098 1321 chr2 62560049 62564118 62561205 N NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 136787 1322 chr2 62588208 62596532 62590221 N NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 164946 1323 chr2 62625376 62627250 62625714 N NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 202114 1324 chr2 62636987 62640268 62639154 N NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 213725 1325 chr2 64449479 64453435 64450490 Y SERTAD2,AFTPH,PELI1 LINC00309 LINC00309,PELI1 IMR90 Hi-C 24141950 LINC00309 16860 1326 chr2 64454354 64457668 64455568 N NA LINC00309 PELI1 IMR90 Hi-C 24141950 LINC00309 21735 1327 chr2 64487513 64496323 64488144 Y PELI1,SERTAD2,AFTPH NA LINC00309,PELI1 IMR90 Hi-C 24141950 LINC00309 54894 1328 chr2 64509966 64512289 64510633 N NA NA NA NA NA NA LINC00309 77347 1329 chr2 64521535 64524432 64522590 N NA NA LINC00309,PELI1 IMR90 Hi-C 24141950 LINC00309 88916 1330 chr2 64544242 64546851 64545678 Y PELI1,SERTAD2,AFTPH NA LINC00309,PELI1,AFTPH IMR90 Hi-C 24141950 LINC00309 111623 1331 chr2 64551882 64556766 64554585 N NA NA PELI1,AFTPH,LINC00309 IMR90 Hi-C 24141950 LINC00309 119263 1332 chr2 64901271 64929362 64926633 N NA SERTAD2 SERTAD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 20225 1333 chr2 64941438 64956505 64951141,64954954 N,N NA;NA NA SERTAD2,AFTPH,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 60392 1334 chr2 64976190 64978189 64978161 N NA NA SERTAD2,LOC339807,AFTPH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 95144 1335 chr2 64993361 64997321 64995090 Y SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2 NA SERTAD2,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 112315 1336 chr2 65045474 65048231 65047033 Y AFTPH,SERTAD2,SLC1A4,RAB1A NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 LOC400958 111350 1337 chr2 65056791 65069033 65058671,65067253 Y,Y AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2;SLC1A4,RAB1A NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 LOC400958 90548 1338 chr2 65171885 65175621 65173584 Y AFTPH,SERTAD2 LOC400958,SLC1A4 SERTAD2,AFTPH,LOC339807,LOC400958,SLC1A4,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC400958 12304 1339 chr2 65661722 65664785 65663342 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 2066 1340 chr2 68664883 68667517 68665895 N NA FBXO48 PPP3R1 K562 ChIA-PET 22265404 FBXO48 26873 1341 chr2 69134473 69136929 69135757 Y NA NA ARHGAP25,APLF,FBXO48,BMP10 IMR90 Hi-C 24141950 FBXO48 440083 1342 chr2 72106660 72110156 72108215 N NA NA EXOC6B,DYSF IMR90 Hi-C 24141950 ZNF638 547775 1343 chr2 75638404 75644865 75643967 N NA NA TACR1 IMR90 Hi-C 24141950 MRPL19 229044 1344 chr2 75656711 75661913 75660042 N NA NA TACR1 IMR90 Hi-C 24141950 MRPL19 211996 1345 chr2 76025968 76033338 76027845 N NA NA NA NA NA NA GCFC2 87857 1346 chr2 85115068 85117198 85116060 Y C2orf89,TMSB10 TMSB10 TMSB10 MCF7 ChIA-PET 22265404 TMSB10 15565 1347 chr2 85121131 85123039 85121875 N NA TMSB10 DNAH6,TMSB10 IMR90 Hi-C 24141950 TMSB10 9724 1348 chr2 85124709 85126993 85125579 N NA TMSB10 DNAH6,TMSB10,C2orf89,KCMF1 IMR90 Hi-C 24141950 TMSB10 5770 1349 chr2 85644330 85649482 85645712,85647854 N,N NA;NA NA ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 ELMOD3 62487 1350 chr2 8608782 8630729 8628398 Y NA NA LINC00299,LOC100506274,LOC339788 IMR90 Hi-C 24141950 ID2 191384 1351 chr2 8653000 8660600 8656069,8658933 N,N NA;NA NA LOC100506274,LINC00299,ID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ID2 161513 1352 chr2 8664274 8667968 8666272 N NA NA LOC100506274,LINC00299,ID2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 154145 1353 chr2 8678645 8687081 8684427 N NA NA LOC100506274,ID2,LOC339788,LINC00299 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 135032 1354 chr2 872935 875759 874687,874503 N,N NA;NA NA SNTG2,TPO,LOC339822 IMR90 Hi-C 24141950 TMEM18 195496 1355 chr2 8817777 8819942 8819382 N NA ID2 NA NA NA NA ID2 2171 1356 chr2 89150944 89160387 89156381 N NA NA NA NA NA NA ANKRD36BP2 85525 1357 chr2 89162748 89167562 89166040 N NA NA NA NA NA NA ANKRD36BP2 97329 1358 chr2 89326569 89329921 89327289,89328829 N,N NA;NA NA NA NA NA NA ANKRD36BP2 261150 1359 chr2 89441950 89444895 89442718 N NA NA NA NA NA NA ANKRD36BP2 376531 1360 chr2 89597800 89600999 89599148 N NA NA LOC654342 IMR90 Hi-C 24141950 ANKRD36BP2 532381 1361 chr2 90537737 90539529 90538359 N NA NA NA NA NA NA ANKRD36BP2 1472318 1362 chr2 9238385 9241799 9239752,9239599 N,N NA;NA NA MBOAT2,ASAP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIDINS220 260630 1363 chr2 95871897 95874483 95873182 N NA ZNF514,ZNF2 ZNF2 MCF7 ChIA-PET 22265404 ZNF2 40714 1364 chr2 96185064 96210621 96192363,96196644,96205602 N,N,N NA;NA;NA NA NA NA NA NA FAHD2A 116616 1365 chr2 96489151 96501572 96500968 N NA NA NA NA NA NA LOC729234 174727 1366 chr2 96656366 96659065 96657678 N NA LOC729234 NA NA NA NA LOC729234 17234 1367 chr2 96821636 96826430 96823700,96825442 Y,N TMEM127,KIAA1310,ARID5A,ASTL,DUSP2;NA ASTL,DUSP2,LOC285033,STARD7 ASTL,DUSP2,STARD7,LOC285033,ADRA2B,SNRNP200,TMEM127,CIAO1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP2 10457 1368 chr2 96976708 96988716 96987157,96981640 N,N NA;NA TMEM127,CIAO1,SNRNP200,ITPRIPL1,NCAPH SNRNP200 MCF7,K562 ChIA-PET 22265404 ITPRIPL1 2346 1369 chr2 97190721 97195708 97193034 N NA NEURL3,ARID5A TMEM127,CIAO1,NCAPH,ITPRIPL1,SNRNP200,ARID5A,LOC285033,NEURL3,KANSL3,CNNM4,FER1L5 IMR90 Hi-C 24141950 ARID5A 6756 1370 chr2 9793969 9798336 9795028 N NA YWHAQ YWHAQ,TAF1B,GRHL1,ADAM17,KLF11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 YWHAQ 22863 1371 chr2 98625599 98631323 98630668,98626775 N,N NA;NA TMEM131 TMEM131,VWA3B,ZAP70 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM131 13245 1372 chr2 98641543 98645864 98643198,98645043 N,N NA;NA TMEM131 TMEM131,VWA3B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM131 29189 1373 chr2 9892458 9894496 9893189 N NA NA YWHAQ,ADAM17,ITGB1BP1,IAH1,RRM2,CPSF3,GRHL1,KLF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 89075 1374 chr20 10761365 10763516 10761982 N NA NA NA NA NA NA JAG1 106671 1375 chr20 11381395 11383924 11382487,11382895 N,N NA;NA NA MKKS,C20orf94,JAG1 IMR90 Hi-C 24141950 BTBD3 487553 1376 chr20 17804905 17807902 17806682 N NA NA BANF2,RRBP1,C20orf72,SNX5 IMR90 Hi-C 24141950 SNX5 141588 1377 chr20 17875527 17879004 17877116 Y NA NA BANF2,BFSP1,RRBP1,DSTN,SNX5,C20orf72 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SNX5 70486 1378 chr20 20712322 20716005 20715447,20713450 Y,N RALGAPA2;NA RALGAPA2 NA NA NA NA RALGAPA2 19056 1379 chr20 2187696 2194502 2188391 N NA NA PDYN,TGM3,TGM6 IMR90 Hi-C 24141950 STK35 105168 1380 chr20 23127328 23132033 23128920 N NA NA CD93,THBD K562 ChIA-PET 22265404 NXT1 199340 1381 chr20 2504829 2507539 2505566 N NA ZNF343 TMC2 IMR90 Hi-C 24141950 ZNF343 15051 1382 chr20 25823787 25825902 25825402 N NA NA NA NA NA NA ZNF337 146318 1383 chr20 31259600 31262402 31260878 N NA NA C20orf112,COMMD7,DNMT3B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 COMMD7 69412 1384 chr20 32469234 32474459 32471478 N NA NA ZNF341,CHMP4B,RALY,EIF2S2,PXMP4,E2F1 IMR90 Hi-C 24141950 CHMP4B 70124 1385 chr20 32925584 32931907 32926153 N NA ITCH NCOA6,ITCH,DYNLRB1,AHCY,TP53INP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITCH 19155 1386 chr20 34651478 34654391 34652718 Y NA LOC647979 LOC647979,PHF20,SCAND1,C20orf152,EPB41L1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC647979 12596 1387 chr20 35897877 35901456 35898754 Y SAMHD1,SRC,MANBAL MANBAL RPN2,GHRH,MANBAL,NNAT,BLCAP,SRC IMR90 Hi-C 24141950 MANBAL 16595 1388 chr20 35904144 35906916 35905456 Y SAMHD1,SRC,MANBAL MANBAL RPN2,NNAT,BLCAP,MANBAL,GHRH,SRC,LOC100287792,VSTM2L,TTI1,RPRD1B IMR90 Hi-C 24141950 MANBAL 11135 1389 chr20 38457273 38460428 38458400 N NA NA NA NA NA NA DHX35 866292 1390 chr20 39618700 39623939 39619791 N NA TOP1 TOP1,PLCG1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 33523 1391 chr20 39942638 39948458 39946369 N NA ZHX3 PLCG1,ZHX3,EMILIN3,LPIN3,IQGAP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 ZHX3 13899 1392 chr20 39958017 39959412 39958363 Y NA ZHX3 PLCG1,ZHX3,LPIN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZHX3 29278 1393 chr20 4004264 4005343 4004623 N NA RNF24 CDC25B,PANK2,MIR103B2,RNF24,SMOX,HSPA12B,CENPB,MAVS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNF24 8048 1394 chr20 4017802 4020031 4018916 Y PANK2,PANK2,PANK2,RNF24,RNF24 RNF24 RNF24,CENPB,PANK2 IMR90 Hi-C 24141950 RNF24 21586 1395 chr20 40320379 40323847 40321965 N NA NA CHD6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD6 73246 1396 chr20 4062454 4064141 4063524 N NA NA RNF24,PANK2,MAVS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNF24 66238 1397 chr20 42380209 42382586 42381260 Y C20orf111 NA TOX2 IMR90 Hi-C 24141950 MYBL2 84500 1398 chr20 44735905 44738517 44737437 N NA NCOA5,CD40 SLC12A5,CD40 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD40 8389 1399 chr20 46027274 46046645 46042925 N NA ZMYND8 ZMYND8,LOC100131496,NCOA3,SULF2,EYA2 IMR90 Hi-C 24141950 ZMYND8 41800 1400 chr20 46061312 46069899 46063071,46067864 N,Y NA;NCOA3 NA NCOA3,EYA2,ZMYND8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NCOA3 60702 1401 chr20 46079108 46085123 46082346 Y NA NCOA3 NCOA3,ZMYND8,LOC100131496,EYA2 IMR90 Hi-C 24141950 NCOA3 45478 1402 chr20 46095739 46098215 46096906 N NA NCOA3 NCOA3,ZMYND8,EYA2,LOC100131496 IMR90 Hi-C 24141950 NCOA3 32386 1403 chr20 46099886 46117793 46102150,46116136 N,Y NA;NCOA3 NCOA3 NCOA3,ZMYND8,EYA2 IMR90 Hi-C 24141950 NCOA3 12808 1404 chr20 47116400 47119065 47117192 N NA NA SULF2 IMR90 Hi-C 24141950 LINC00494 127746 1405 chr20 47157105 47159637 47158293 N NA NA SULF2 IMR90 Hi-C 24141950 LINC00494 168451 1406 chr20 47446949 47450566 47448668 Y PREX1,ZNFX1 PREX1 PREX1,ARFGEF2 IMR90 Hi-C 24141950 PREX1 2529 1407 chr20 47454359 47456739 47455606 Y NA PREX1 PREX1,ARFGEF2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PREX1 9939 1408 chr20 47461933 47464429 47463576 Y ZNFX1 PREX1 PREX1 IMR90 Hi-C 24141950 PREX1 17513 1409 chr20 48363227 48369283 48364787,48367612 N,N NA;NA B4GALT5 B4GALT5 IMR90 Hi-C 24141950 B4GALT5 32806 1410 chr20 48401513 48404328 48402500 Y B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8 SLC9A8 KCNB1,B4GALT5,SLC9A8,SPATA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 24922 1411 chr20 48417716 48420767 48418982,48418795 N,N NA;NA SLC9A8 SLC9A8,B4GALT5,KCNB1,SPATA2 IMR90 Hi-C 24141950 SLC9A8 8483 1412 chr20 48421293 48423682 48421955 N NA SLC9A8 SPATA2 IMR90 Hi-C 24141950 SLC9A8 5568 1413 chr20 48778336 48787670 48782783 N NA UBE2V1,TMEM189-UBE2V1,CEBPB TMEM189-UBE2V1,SNAI1,UBE2V1,FAM65C,MIR645,PTPN1,RNF114,CEBPB K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 TMEM189-UBE2V1 8001 1414 chr20 48901008 48904430 48902933 N NA NA PTPN1,LOC284751,PARD6B,FAM65C,MIR645,CEBPB,TMEM189-UBE2V1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CEBPB 93888 1415 chr20 48954234 48957241 48955671 Y RNF114,SNAI1,CEBPB,PTPN1 NA CEBPB,LOC284751,PTPN1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 CEBPB 147114 1416 chr20 49096734 49102118 49100222 Y TMEM189,CEBPB,PTPN1 PTPN1 LOC284751,CEBPB,TMEM189-UBE2V1,MIR645,FAM65C,PTPN1,PARD6B,UBE2V1,SNAI1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 24773 1417 chr20 52211172 52218856 52215373 N NA ZNF217 SUMO1P1,BCAS1,BMP7,SULF2,ZMYND8,CYP24A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 11536 1418 chr20 52223968 52230225 52227191 N NA ZNF217 SUMO1P1,ZNF217,BCAS1 IMR90 Hi-C 24141950 ZNF217 24332 1419 chr20 52237303 52241757 52239509 N NA ZNF217 SUMO1P1,BMP7,ZNF217,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 37667 1420 chr20 52258284 52261972 52259697 N NA NA SUMO1P1,BCAS1 IMR90 Hi-C 24141950 ZNF217 58648 1421 chr20 52267183 52274752 52269661 N NA NA SUMO1P1,BCAS1,BMP7,ZNF217,SULF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 67547 1422 chr20 52275365 52280808 52277501 N NA NA SUMO1P1,ZNF217,SULF2,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 75729 1423 chr20 52301612 52303868 52302719 N NA NA SUMO1P1 IMR90 Hi-C 24141950 ZNF217 101976 1424 chr20 52322166 52326322 52324973,52323079 N,Y NA;NA NA SUMO1P1,ZNF217 IMR90 Hi-C 24141950 ZNF217 122530 1425 chr20 52344709 52348132 52345886 N NA NA ZNF217 IMR90 Hi-C 24141950 ZNF217 145073 1426 chr20 52351951 52359089 52356598,52352352 N,Y NA;ZNF217 NA ZNF217,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 152315 1427 chr20 52366693 52372553 52368079,52371160 Y,Y ZNF217;ZNF217 NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF217 167057 1428 chr20 52444517 52448031 52446230 Y ZNF217 NA ZNF217,SUMO1P1,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 244881 1429 chr20 52449805 52452294 52451286 N NA NA ZNF217,BCAS1,SUMO1P1 IMR90 Hi-C 24141950 ZNF217 250169 1430 chr20 52455017 52457457 52456294 Y NA NA ZNF217,SUMO1P1 IMR90 Hi-C 24141950 ZNF217 255381 1431 chr20 52506855 52513178 52510466 N NA NA BCAS1,SUMO1P1,ZNF217,BMP7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 307219 1432 chr20 53598675 53601175 53600253 N NA NA NA NA NA NA PFDN4 774173 1433 chr20 56025391 56029207 56026350 N NA NA MIR5095 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MTRNR2L3 90513 1434 chr20 5624232 5630207 5626783 N NA GPCPD1 GPCPD1,C20orf196,TRMT6 IMR90 Hi-C 24141950 GPCPD1 32560 1435 chr20 61075911 61083760 61077134 Y DPH3P1,OGFR,DIDO1 NA NA NA NA NA CABLES2 93572 1436 chr21 10492763 10493160 10492964 N NA NA NA NA NA NA TEKT4P2 524170 1437 chr21 10596252 10603503 10597583 N NA NA NA NA NA NA TEKT4P2 627659 1438 chr21 15398739 15400869 15399682 N NA NA NA NA NA NA HSPA13 354640 1439 chr21 15824240 15827918 15826443 N NA NA NA NA NA NA HSPA13 68731 1440 chr21 16047459 16050107 16048510 N NA NA NA NA NA NA HSPA13 291950 1441 chr21 16058115 16062271 16059153 N NA NA NA NA NA NA HSPA13 302606 1442 chr21 16132758 16136807 16135387 N NA NA NA NA NA NA NRIP1 300319 1443 chr21 25800226 25832462 25801078 N NA NA NA NA NA NA LINC00158 971551 1444 chr21 26827498 26839041 26830135,26835052,26832232 Y,Y,N NA;MRPL39;NA LINC00158 MIR155HG IMR90 Hi-C 24141950 LINC00158 23485 1445 chr21 26855332 26862401 26859160 N NA NA NA NA NA NA LINC00158 51319 1446 chr21 26864742 26886451 26867286,26874080,26870149,26883714,26880210 N,Y,N,N,N NA;NA;NA;NA;NA MIR155HG LINC00515,MRPL39 IMR90 Hi-C 24141950 MIR155HG 48006 1447 chr21 26921709 26924313 26923198 N NA MIR155HG NA NA NA NA MIR155HG 10144 1448 chr21 34301147 34305955 34301900,34304887 N,N NA;NA NA C21orf54,ATP5O,C21orf62,OLIG1,SON,IFNGR2 H1ESC,IMR90,GM12878,HELA,K562 5C,Hi-C 22955621,24141950 C21orf49 156736 1449 chr21 34574243 34580897 34576980 N NA IFNAR2 IL10RB,TMEM50B,IFNAR1,IFNGR2,IFNAR2,LOC100288432,C21orf119,URB1,GART,SON,DONSON,CRYZL1 IMR90,GM12878,K562 Hi-C,5C 24141950,22955621 IFNAR2 21334 1450 chr21 34584060 34590074 34584808,34588309 N,Y NA;NA IFNAR2,IL10RB IFNAR1,TMEM50B,IFNGR2,IFNAR2,IL10RB,LOC100288432,CRYZL1 IMR90,K562,GM12878 Hi-C,5C 24141950,22955621 IFNAR2 12157 1451 chr21 35380302 35394363 35391428 N NA NA KCNE2,MRPS6,ATP5O,LOC100506334 IMR90 Hi-C 24141950 MRPS6 51460 1452 chr21 36577103 36578301 36577554 N NA NA RUNX1,SETD4,CLIC6,LOC100506385 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RUNX1 155508 1453 chr21 36900600 36901901 36901318 N NA NA RUNX1,LOC100506385 IMR90 Hi-C 24141950 RUNX1 479005 1454 chr21 38931879 38938006 38936247 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 192020 1455 chr21 43607541 43609637 43608522 N NA NA ABCG1,TFF3,TFF2,RSPH1 IMR90 Hi-C 24141950 ZNF295 177045 1456 chr21 44732098 44734627 44733370 N NA NA LINC00313,HSF2BP,CRYAA,RRP1B,SIK1 IMR90 Hi-C 24141950 SIK1 112375 1457 chr21 44776955 44783568 44781824 N NA NA HSF2BP,SIK1,LINC00319,CRYAA,LINC00313,RRP1B IMR90 Hi-C 24141950 SIK1 63434 1458 chr21 44849035 44852529 44850434 N NA SIK1 CRYAA,SIK1,HSF2BP,LINC00313,LINC00319,RRP1B IMR90 Hi-C 24141950 SIK1 2033 1459 chr21 44858908 44860646 44859923 N NA SIK1 NA NA NA NA SIK1 11906 1460 chr21 45273320 45276267 45275141 N NA AGPAT3 AGPAT3,PDXK,LOC284837,TRAPPC10 IMR90 Hi-C 24141950 AGPAT3 8849 1461 chr21 45589135 45611542 45593028,45595178,45604660 Y,N,Y PDXK,TRAPPC10,TRPM2,ICOSLG;NA;PDXK,TRAPPC10,TRPM2,ICOSLG C21orf33,ICOSLG C21orf33,PWP2,ICOSLG,DNMT3L,PFKL,AIRE K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 C21orf33 35641 1462 chr21 46968777 46972999 46970656 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 6392 1463 chr21 9682837 9691255 9686755 N NA NA NA NA NA NA TEKT4P2 277338 1464 chr21 9881359 9883137 9882363 N NA NA NA NA NA NA TEKT4P2 85456 1465 chr22 16192328 16194236 16192724 N NA NA NA NA NA NA TPTEP1 888565 1466 chr22 17694348 17701414 17700399,17696360 N,N NA;NA CECR5 NA NA NA NA CECR5 48171 1467 chr22 20977763 20981304 20979182 N NA NA PI4KA,MED15,KLHL22,SERPIND1,SCARF2,ZNF74 IMR90 Hi-C 24141950 TMEM191A 74098 1468 chr22 22378929 22381897 22380753 N NA TOP3B VPREB1 IMR90 Hi-C 24141950 TOP3B 41782 1469 chr22 22383477 22387242 22385644 N NA TOP3B VPREB1 IMR90 Hi-C 24141950 TOP3B 46330 1470 chr22 22396364 22398212 22396717 Y NA NA NA NA NA NA TOP3B 59217 1471 chr22 22451478 22455820 22453369 N NA NA LOC96610,VPREB1 IMR90 Hi-C 24141950 TOP3B 114331 1472 chr22 22464515 22467106 22465520 N NA NA VPREB1 IMR90 Hi-C 24141950 TOP3B 127368 1473 chr22 22510986 22512347 22511634 N NA NA NA NA NA NA LOC96610 140116 1474 chr22 22521321 22524184 22522813 N NA NA VPREB1,LOC96610 IMR90 Hi-C 24141950 LOC96610 128279 1475 chr22 22549495 22557496 22550415,22556131 N,N NA;NA NA VPREB1,LOC96610 IMR90 Hi-C 24141950 LOC96610 94967 1476 chr22 22804048 22805539 22805023 N NA NA PRAME,IGLL5 IMR90 Hi-C 24141950 ZNF280B 57966 1477 chr22 23061816 23064960 23063375 N NA NA ZNF280B,GNAZ,RTDR1 IMR90 Hi-C 24141950 IGLL5 165000 1478 chr22 23268787 23288155 23271101,23275581,23285077 Y,N,N NA;NA;NA IGLL5 MIR650,IGLL5,GNAZ,RTDR1,BCR IMR90 Hi-C 24141950 IGLL5 38827 1479 chr22 24261301 24273564 24272880 N NA LOC284889,DDTL,DDT DDT,DDTL K562,MCF7 ChIA-PET 22265404 LOC284889 20184 1480 chr22 25795608 25803585 25801448,25799848 N,N NA;NA LRP5L,CRYBB2P1 LRP5L,SEZ6L,CRYBB2P1,ADRBK2,MYO18B IMR90 Hi-C 24141950 LRP5L 18064 1481 chr22 25814703 25816572 25815536 N NA LRP5L,CRYBB2P1 MYO18B,CRYBB2P1,LRP5L,SEZ6L,KIAA1671 IMR90 Hi-C 24141950 CRYBB2P1 27482 1482 chr22 27105384 27114413 27107211 N NA NA MIAT IMR90 Hi-C 24141950 MIAT 51938 1483 chr22 29806645 29812407 29808289,29811119 N,N NA;NA AP1B1 THOC5 IMR90 Hi-C 24141950 AP1B1 22073 1484 chr22 35446681 35451377 35447991,35449899 N,N NA;NA NA ISX IMR90 Hi-C 24141950 HMGXB4 202068 1485 chr22 35521297 35529600 35524250,35527773 N,N NA;NA NA LARGE IMR90 Hi-C 24141950 HMGXB4 123845 1486 chr22 35543296 35547325 35545661 N NA NA LARGE IMR90 Hi-C 24141950 HMGXB4 106120 1487 chr22 36023043 36024832 36023758 N NA APOL6 MB MCF7 ChIA-PET 22265404 APOL6 19592 1488 chr22 36821211 36823797 36822207 N NA MYH9 MYH9,FOXRED2,TXN2 IMR90 Hi-C 24141950 MYH9 37148 1489 chr22 36830465 36834541 36831743 N NA MYH9,TXN2 TXN2,MYH9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TXN2 43146 1490 chr22 37127157 37131464 37130334 N NA IFT27 CACNG2,IFT27,LOC100506241,EIF3D,NCF4,CSF2RB,KCTD17,SSTR3 IMR90 Hi-C 24141950 IFT27 40713 1491 chr22 37295320 37299668 37297284 N NA NCF4,CSF2RB NA NA NA NA CSF2RB 10007 1492 chr22 37550103 37552527 37551491 N NA IL2RB,C1QTNF6 TMPRSS6,SSTR3,C1QTNF6 IMR90 Hi-C 24141950 IL2RB 4141 1493 chr22 39336613 39338742 39337819 Y DDX17,JOSD1,GTPBP1,SUN2,APOBEC3A APOBEC3A NPTXR,MGAT3,APOBEC3A,CBX6,CBX7,APOBEC3H IMR90 Hi-C 24141950 APOBEC3A 14785 1494 chr22 39649239 39652882 39651298,39649681 N,Y NA;SUN2,APOBEC3A,PDGFB NA CBX7,RNU86,RPL3,SNORD83A,PDGFB IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RPL3 62788 1495 chr22 39659695 39663936 39661720,39662557 N,Y NA;ATF4,APOBEC3A NA PDGFB,RPL3,SNORD83B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RPL3 51734 1496 chr22 41415508 41421547 41418041 Y MKL1,EP300 NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EP300 67067 1497 chr22 41463577 41466566 41465329 N NA EP300 RBX1,EP300,XPNPEP3,MIR1281,RANGAP1,CHADL,L3MBTL2 IMR90 Hi-C 24141950 EP300 22048 1498 chr22 42695748 42698023 42696489 N NA LOC388906 TCF20,NFAM1 IMR90 Hi-C 24141950 LOC388906 29989 1499 chr22 42838387 42860226 42840214 Y POLDIP3,C22orf32,TCF20,RRP7A,NFAM1 NFAM1 MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3,FAM109B,NAGA,SERHL,SERHL2,RRP7B,SEPT3,CYP2D7P1,LOC388906 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAM1 9986 1500 chr22 42932296 42936318 42933497,42935676 N,N NA;NA RRP7A,RRP7B NA NA NA NA RRP7A 16467 1501 chr22 43057439 43059729 43058042 N NA POLDIP3,CYB5R3 A4GALT,CYB5R3,ARFGAP3,POLDIP3,RNU12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CYB5R3 12034 1502 chr22 45657560 45661130 45659927 N NA KIAA0930,FAM118A LOC100506714,NUP50,SMC1B,KIAA0930,PHF21B,FBLN1,FAM118A,RIBC2,UPK3A,ATXN10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0930 20910 1503 chr22 46955129 46961749 46957606 Y NA NA CERK,CELSR1,TRMU,GRAMD4,TBC1D22A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GRAMD4 60909 1504 chr22 46971667 47008646 46972963,46989495,46983459 N,Y,N NA;TBC1D22A,CERK,GRAMD4;NA GRAMD4 TRMU,GRAMD4,CELSR1 IMR90 Hi-C 24141950 GRAMD4 14012 1505 chr22 49870126 49871600 49870526 N NA NA NA NA NA NA C22orf34 179590 1506 chr22 50221602 50224076 50222669 N NA BRD1,ZBED4 BRD1 MCF7 ChIA-PET 22265404 BRD1 3150 1507 chr3 100320824 100323215 100322559 N NA NA TFG MCF7 ChIA-PET 22265404 TFG 104919 1508 chr3 101616242 101620808 101617864 Y ZBTB11,NFKBIZ,NFKBIZ NFKBIZ LOC152225 IMR90 Hi-C 24141950 NFKBIZ 47884 1509 chr3 101776348 101778742 101777587 N NA NA FAM55C IMR90 Hi-C 24141950 NFKBIZ 207990 1510 chr3 101897376 101899782 101898933 N NA NA FAM55C,LOC152225,NFKBIZ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFKBIZ 329018 1511 chr3 104236873 104246750 104238165,104241820 N,Y NA;NA NA NA NA NA NA ALCAM 838807 1512 chr3 105600848 105602710 105601569 N NA CBLB NA NA NA NA CBLB 12961 1513 chr3 105901494 105905980 105903361 N NA NA NA NA NA NA CBLB 313607 1514 chr3 105955781 105977629 105975320 Y NA NA NA NA NA NA CBLB 367894 1515 chr3 107149092 107151701 107150360 N NA NA LOC344595,BBX,LOC100302640 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BBX 90082 1516 chr3 107820147 107823303 107821583 N NA CD47 IFT57,MYH15,CD47 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD47 10212 1517 chr3 108011215 108014655 108012497 N NA NA NA NA NA NA CD47 201280 1518 chr3 111392699 111394519 111393481 N NA NA CD96,PHLDB2 IMR90 Hi-C 24141950 ABHD10 303309 1519 chr3 112015371 112018463 112017029 N NA CD200 CD200,SLC9A10 IMR90 Hi-C 24141950 CD200 33453 1520 chr3 112020843 112024011 112021921 N NA CD200 CD200,BTLA,ATG3,SLC35A5,C3orf52 IMR90 Hi-C 24141950 CD200 27905 1521 chr3 112221512 112223797 112223135 N NA BTLA CD200 IMR90 Hi-C 24141950 BTLA 3104 1522 chr3 112413952 112416775 112415159 N NA NA CCDC80,CD200R1L IMR90 Hi-C 24141950 SLC35A5 133057 1523 chr3 11765889 11766957 11766276 N NA VGLL4 VGLL4 MCF7 ChIA-PET 22265404 VGLL4 3669 1524 chr3 118522182 118529253 118528283 N NA NA NA NA NA NA B4GALT4 430499 1525 chr3 119415563 119418160 119416399 N NA POPDC2,COX17 NA NA NA NA COX17 19320 1526 chr3 121267168 121269234 121267859 N NA POLQ NA NA NA NA POLQ 2315 1527 chr3 125915453 125917848 125916980 N NA NA ALDH1L1,CCDC37,ZXDC IMR90 Hi-C 24141950 SLC41A3 95062 1528 chr3 12595022 12596338 12595686 N NA MKRN2 LOC100129480 IMR90 Hi-C 24141950 MKRN2 2256 1529 chr3 126923323 126947706 126936255,126925001,126939553,126946091 N,N,Y,Y NA;NA;NA;MCM2 NA NUP210P1,CHCHD6 IMR90 Hi-C 24141950 PLXNA1 215886 1530 chr3 127548450 127557528 127549349,127554593 N,Y NA;NA MGLL MGLL,MCM2,PODXL2,KBTBD12 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 MGLL 6357 1531 chr3 128397445 128401892 128399669 N NA RPN1,RAB7A RAB7A,RPN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPN1 27726 1532 chr3 133223996 133227006 133225417 Y CDV3,CDV3 NA BFSP2,TOPBP1 IMR90 Hi-C 24141950 CDV3 65428 1533 chr3 13491892 13494647 13493411 Y NA NUP210 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NUP210 30083 1534 chr3 137045746 137053424 137049139,137051336 N,N NA;NA NA NA NA NA NA IL20RB 369039 1535 chr3 137705972 137710210 137707662 N NA NA NA NA NA NA DBR1 183581 1536 chr3 138552246 138555255 138553811 N NA NA PIK3CB IMR90 Hi-C 24141950 PIK3CB 74045 1537 chr3 138633262 138635028 138634705 N NA NA ESYT3,PIK3CB,MRPS22,MRAS,CEP70,FAIM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIK3CB 155061 1538 chr3 140443034 140445594 140444225 Y NA NA NA NA NA NA SLC25A36 215068 1539 chr3 140561423 140563122 140562259 N NA NA SPSB4,CLSTN2 IMR90,Erythroid progenitor Hi-C,3C 24141950,19696202 SLC25A36 97540 1540 chr3 142800400 142803665 142801495 N NA CHST2 CHST2 K562 ChIA-PET 22265404 CHST2 34953 1541 chr3 142882935 142885214 142884612 N NA CHST2 SLC9A9,CHST2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CHST2 44317 1542 chr3 142895201 142898179 142897578 N NA NA CHST2,SLC9A9 IMR90 Hi-C 24141950 CHST2 56583 1543 chr3 14360060 14362048 14361260 N NA NA SLC6A6 IMR90 Hi-C 24141950 SLC6A6 82058 1544 chr3 143845889 143849705 143847323 N NA NA NA NA NA NA C3orf58 155249 1545 chr3 144155949 144158546 144156734 N NA NA NA NA NA NA C3orf58 465309 1546 chr3 148036596 148037653 148037209 N NA NA AGTR1 IMR90 Hi-C 24141950 GYG1 671542 1547 chr3 149831208 149834599 149832274 Y NA NA LOC646903,PFN2,TSC22D2,RNF13 IMR90 Hi-C 24141950 PFN2 142467 1548 chr3 150100720 150104814 150103295 N NA TSC22D2 PFN2,RNF13,TSC22D2,SERP1,EIF2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 21974 1549 chr3 151909763 151912904 151911628 N NA NA MBNL1,LOC401093 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MBNL1 72925 1550 chr3 151913562 151922702 151917029,151920945 Y,N NA;NA NA MBNL1,LOC401093 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MBNL1 63127 1551 chr3 151936508 151938354 151937293 N NA MBNL1,LOC401093 NA NA NA NA MBNL1 47475 1552 chr3 152313104 152318156 152313982 Y NA NA NA NA NA NA P2RY1 234580 1553 chr3 152454564 152456073 152455000 N NA NA NA NA NA NA P2RY1 96663 1554 chr3 15386427 15388407 15387000 N NA SH3BP5 SH3BP5,COL6A4P1,CAPN7,LOC100505696,COLQ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SH3BP5 3526 1555 chr3 15401855 15406703 15404176,15403510 N,N NA;NA SH3BP5 CAPN7,COL6A4P1,LOC100505696,SH3BP5 IMR90 Hi-C 24141950 SH3BP5 18954 1556 chr3 156323085 156325221 156324206 N NA NA TIPARP-AS1,TIPARP,CCNL1,SSR3,LOC339894,LOC100498859 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SSR3 50112 1557 chr3 156360373 156362611 156361411 N NA TIPARP,TIPARP-AS1 LOC339894,TIPARP,TIPARP-AS1,LEKR1,LOC100498859 IMR90 Hi-C 24141950 TIPARP 29594 1558 chr3 156891389 156905058 156892902 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 12907 1559 chr3 159639618 159642387 159640941 N NA NA IQCJ-SCHIP1,IL12A,IFT80,SMC4 IMR90 Hi-C 24141950 IL12A 64236 1560 chr3 159646680 159648511 159647555 N NA NA IQCJ-SCHIP1,IL12A,IFT80,SMC4 IMR90 Hi-C 24141950 IL12A 58112 1561 chr3 159744096 159747847 159745600 N NA IL12A IQCJ-SCHIP1,IFT80,SMC4,C3orf80 IMR90 Hi-C 24141950 IL12A 37473 1562 chr3 161882577 161884166 161883536 N NA NA NA NA NA NA NMD3 943478 1563 chr3 162314505 162317165 162316525 N NA NA NA NA NA NA NMD3 1375406 1564 chr3 16882512 16886376 16884064 Y RFTN1,PLCL2,PLCL2 PLCL2 TBC1D5 IMR90 Hi-C 24141950 PLCL2 40076 1565 chr3 172308476 172311597 172310543 N NA NA TNFSF10,FNDC3B,NCEH1 IMR90 Hi-C 24141950 TNFSF10 67179 1566 chr3 177074599 177080079 177077071 N NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 159551 1567 chr3 178197063 178201369 178198466 N NA NA KCNMB2 IMR90 Hi-C 24141950 ZMAT3 588287 1568 chr3 178677311 178688628 178687437 N NA NA KCNMB2 IMR90 Hi-C 24141950 ZMAT3 101028 1569 chr3 178793376 178795650 178794292 N NA ZMAT3 NA NA NA NA ZMAT3 3720 1570 chr3 181648985 181650926 181649840 N NA NA NA NA NA NA ATP11B 860365 1571 chr3 182433646 182435610 182434571 N NA NA SOX2-OT IMR90 Hi-C 24141950 ATP11B 75681 1572 chr3 182446523 182450495 182448210 N NA NA ATP11B IMR90 Hi-C 24141950 ATP11B 60796 1573 chr3 184465459 184468049 184466304 N NA MAGEF1 EPHB3,MAGEF1,CHRD,THPO,CLCN2,POLR2H IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAGEF1 35623 1574 chr3 186130391 186133681 186132012 N NA NA LOC344887,DGKG,ETV5,LOC253573 IMR90 Hi-C 24141950 DGKG 50368 1575 chr3 186225444 186234798 186229052,186233096 N,N NA;NA CRYGS DGKG,LOC344887,LOC253573 IMR90 Hi-C 24141950 CRYGS 27369 1576 chr3 186900311 186902721 186901179 Y NA RPL39L LOC100131635 IMR90 Hi-C 24141950 RPL39L 43048 1577 chr3 189111169 189115360 189112682 N NA NA NA NA NA NA TP63 233856 1578 chr3 189280518 189287646 189281884,189286099 N,N NA;NA NA TPRG1,TP63 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TP63 61570 1579 chr3 189289724 189293485 189290472 N NA NA TP63,TPRG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TP63 55731 1580 chr3 189302334 189307156 189305143 N NA TP63 TP63 MCF7 ChIA-PET 22265404 TP63 42060 1581 chr3 193774119 193777814 193775927 N NA NA LOC647323 IMR90 Hi-C 24141950 HES1 76117 1582 chr3 193787394 193790099 193788964 N NA NA LOC647323,HES1,LOC100131551 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HES1 63832 1583 chr3 193846790 193850296 193849170 N NA HES1 LOC100131551,LOC647323,HES1 IMR90 Hi-C 24141950 HES1 3635 1584 chr3 195360388 195382785 195361924 N NA SDHAP2 NA NA NA NA SDHAP2 2125 1585 chr3 195821945 195827826 195823426 N NA TFRC LOC401109,TFRC,PCYT1A,LRRC33 IMR90 Hi-C 24141950 TFRC 12913 1586 chr3 195837009 195843728 195842686,195839063 N,N NA;NA TFRC TFRC,LRRC33,LOC401109,RNF168,C3orf43 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TFRC 27977 1587 chr3 196253096 196257174 196255796 Y NA RNF168,WDR53,FBXO45 UBXN7,MUC20,TFRC,LOC401109,OSTalpha,ZDHHC19,PCYT1A,TCTEX1D2,TM4SF19-TCTEX1D2,RNF168,C3orf43,WDR53,CEP19,PAK2,FBXO45 IMR90 Hi-C 24141950 RNF168 22457 1588 chr3 196354787 196362845 196359496,196361334 N,N NA;NA LRRC33 SENP5,FBXO45,C3orf43,PAK2,LRRC33,CEP19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC33 3811 1589 chr3 197119282 197123383 197121427 N NA NA DLG1,LOC100507086,BDH1 IMR90 Hi-C 24141950 DLG1 93835 1590 chr3 197181962 197185931 197183363 N NA NA BDH1,DLG1,LOC100507086 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BDH1 114263 1591 chr3 23111985 23113998 23113499 Y NA NA NA NA NA NA UBE2E2 130786 1592 chr3 23202319 23206955 23204096 N NA UBE2E2 UBE2E1,UBE2E2 IMR90 Hi-C 24141950 UBE2E2 37829 1593 chr3 23694539 23702507 23695367,23700980 N,Y NA;NA NA UBE2E2,UBE2E1,RPL15,NKIRAS1 IMR90 Hi-C 24141950 UBE2E1 144877 1594 chr3 23801599 23805917 23804478 Y NA UBE2E1 UBE2E1,UBE2E2 IMR90 Hi-C 24141950 UBE2E1 41467 1595 chr3 26146505 26149134 26147109 N NA NA NA NA NA NA OXSM 314942 1596 chr3 27673930 27677543 27674676 Y NA NA SLC4A7,NEK10 IMR90 Hi-C 24141950 EOMES 86242 1597 chr3 28082795 28085033 28084043 Y EOMES NA NA NA NA NA CMC1 198091 1598 chr3 31205528 31257178 31254423 N NA NA GADL1 IMR90 Hi-C 24141950 STT3B 317313 1599 chr3 31261245 31292892 31282996,31271395,31288237,31292151 N,N,N,N NA;NA;NA;NA NA GADL1 IMR90 Hi-C 24141950 STT3B 281599 1600 chr3 34148095 34150322 34148985 N NA NA NA NA NA NA PDCD6IP 308032 1601 chr3 39334966 39339061 39336873 N NA CCR8 WDR48,GORASP1,TTC21A,CSRNP1,XIRP1 IMR90 Hi-C 24141950 CCR8 32136 1602 chr3 39402072 39404926 39403100 Y WDR48,XIRP1,XIRP1,CCR8,SLC25A38 CCR8,SLC25A38,RPSA NA NA NA NA SLC25A38 19889 1603 chr3 41011646 41014679 41013250 N NA NA ULK4,CTNNB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTNNB1 226263 1604 chr3 42053121 42063798 42054796,42057549 N,N NA;NA NA TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 68948 1605 chr3 44036080 44049107 44040719,44036938 Y,N NA;NA NA ANO10,FAM198A IMR90 Hi-C 24141950 C3orf23 330837 1606 chr3 44550828 44553464 44552153 N NA ZNF445,ZNF167 ZNF445 K562 ChIA-PET 22265404 ZNF445 31666 1607 chr3 45892612 45909767 45907330,45894845,45902971 N,N,Y NA;NA;NA LZTFL1,CCR9 SLC6A20,SACM1L,LZTFL1,FYCO1,CCR1,CCR9,CCR2,LARS2 IMR90 Hi-C 24141950 LZTFL1 8991 1608 chr3 46137270 46143098 46137286,46139685 N,Y NA;CCR5,CCRL2,CCRL2,CCR1 NA CXCR6,FYCO1,CCR5,SACM1L,SLC6A20,CCR1,CCR3,CCRL2 IMR90 Hi-C 24141950 FYCO1 99954 1609 chr3 46149958 46151970 46150847 Y SACM1L,CCR5,CCRL2,CCRL2,CCR3,CCR2,CCR1 NA CCR5,FYCO1,CCR1,CCR2 IMR90 Hi-C 24141950 CCR1 97862 1610 chr3 46333269 46337802 46335319 N NA NA CCR3,CCR9,CCR2,CCR5,CCRL2,SLC6A20,LOC100132146,FYCO1 IMR90 Hi-C 24141950 CCR1 83437 1611 chr3 46339109 46343615 46340852 N NA NA CCR9,CCR3,CCR2,CCR5,CCRL2,SLC6A20,LOC100132146,FYCO1 IMR90 Hi-C 24141950 CCR1 89277 1612 chr3 49498610 49500871 49499266 N NA RHOA,TCTA,NICN1,DAG1 DAG1 MCF7 ChIA-PET 22265404 DAG1 5265 1613 chr3 5060746 5069967 5068320 Y EDEM1,ARL8B,BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 39649 1614 chr3 5096564 5100281 5097162 N NA NA ITPR1,BHLHE40,EGOT,LOC100507582 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARL8B 63649 1615 chr3 5468817 5471839 5470520 N NA NA NA NA NA NA EDEM1 239458 1616 chr3 57943862 57947175 57945049 N NA FLNB FLNB,ARF4 IMR90 Hi-C 24141950 FLNB 46952 1617 chr3 57968556 57971212 57969720,57969584 Y,Y PDE12,PXK;PDE12,PXK FLNB ARF4,FLNB IMR90 Hi-C 24141950 FLNB 22915 1618 chr3 58201983 58204479 58203525 N NA DNASE1L3,ABHD6 DNASE1L3,FLNB IMR90 Hi-C 24141950 DNASE1L3 5253 1619 chr3 59436066 59438702 59437334,59437328 Y,Y NA;NA NA FHIT IMR90 Hi-C 24141950 KCTD6 958243 1620 chr3 64432247 64435976 64434982 Y NA NA LOC100507062,ATXN7,PRICKLE2,LOC100652759,PSMD6 IMR90 Hi-C 24141950 PSMD6 423127 1621 chr3 72026257 72037000 72031965,72032131,72027530,72034424 Y,N,N,N NA;NA;NA;NA NA SHQ1,LOC201617,RYBP IMR90 Hi-C 24141950 RYBP 458774 1622 chr3 72123827 72130966 72128308 N NA NA SHQ1 IMR90 Hi-C 24141950 RYBP 364808 1623 chr3 72139082 72151340 72149358,72148453 N,N NA;NA NA SHQ1,RYBP IMR90 Hi-C 24141950 RYBP 344434 1624 chr3 72352673 72361361 72359851 Y RYBP NA SHQ1,RYBP IMR90 Hi-C 24141950 RYBP 134413 1625 chr3 72571250 72574112 72572644 N NA NA EIF4E3,RYBP,SHQ1 IMR90 Hi-C 24141950 RYBP 75476 1626 chr3 73159151 73160730 73159918 Y EBLN2 NA PDZRN3,CACNA1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 113032 1627 chr3 75225438 75231017 75229843 Y NA NA NA NA NA NA FAM86DP 253249 1628 chr3 76547014 76588723 76585216,76577275 N,N NA;NA NA NA NA NA NA FAM86DP 1062748 1629 chr3 76613506 76616377 76615165 N NA NA NA NA NA NA FAM86DP 1129240 1630 chr3 81825194 81827742 81825995 N NA GBE1 GBE1 IMR90 Hi-C 24141950 GBE1 14244 1631 chr3 81837103 81840207 81838032 N NA GBE1 NA NA NA NA GBE1 26153 1632 chr3 81864965 81867994 81866338 N NA NA NA NA NA NA GBE1 54015 1633 chr3 81872270 81875304 81873909 N NA NA NA NA NA NA GBE1 61320 1634 chr3 87137521 87139323 87138538 N NA NA NA NA NA NA CHMP2B 137090 1635 chr3 9379642 9391400 9390776 N NA THUMPD3,LOC440944,SETD5 RAD18,CAV3,SRGAP3,THUMPD3,SETD5,LOC440944 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THUMPD3 13317 1636 chr3 95075370 95077348 95076145 N NA NA NA NA NA NA DHFRL1 1293303 1637 chr3 96335909 96338003 96336657 Y NA NA NA NA NA NA MINA 1353292 1638 chr3 97539800 97541948 97540773 N NA NA GABRR3,CPOX IMR90 Hi-C 24141950 MINA 149347 1639 chr3 98163238 98166653 98164963 N NA NA NA NA NA NA CLDND1 75257 1640 chr3 98331036 98333998 98331948 N NA CPOX NA NA NA NA CPOX 18581 1641 chr3 99136102 99139482 99137679 Y NA NA MIR548G,COL8A1 IMR90 Hi-C 24141950 C3orf26 397196 1642 chr3 99148368 99150285 99149363 N NA NA NA NA NA NA C3orf26 386393 1643 chr3 99223230 99226033 99224973 N NA NA MIR548G,COL8A1 IMR90 Hi-C 24141950 C3orf26 310645 1644 chr4 101743492 101746540 101744858 N NA NA NA NA NA NA LOC256880 871856 1645 chr4 105662334 105665776 105664045 N NA NA NA NA NA NA CXXC4 246276 1646 chr4 105785070 105791556 105788056,105790117 N,N NA;NA NA TET2 MCF7 ChIA-PET 22265404 TET2 276286 1647 chr4 105850444 105853513 105852242 N NA NA TET2 MCF7 ChIA-PET 22265404 TET2 214329 1648 chr4 105884115 105889525 105887943,105886178 N,N NA;NA NA TET2 MCF7 ChIA-PET 22265404 TET2 178317 1649 chr4 105977257 105984304 105982369 N NA NA TET2 MCF7 ChIA-PET 22265404 TET2 83538 1650 chr4 113626355 113628144 113627489 N NA NA NA NA NA NA C4orf21 68204 1651 chr4 114745522 114747850 114746562 N NA NA CAMK2D IMR90 Hi-C 24141950 CAMK2D 62439 1652 chr4 116871103 116873763 116872138 N NA NA NA NA NA NA CAMK2D 2188020 1653 chr4 119316853 119319829 119319114 N NA NA PRSS12 IMR90 Hi-C 24141950 SNHG8 116936 1654 chr4 119511450 119560189 119512788 N NA METTL14 NA NA NA NA METTL14 46385 1655 chr4 123071631 123083473 123073465,123072238 N,Y NA;NA KIAA1109 KIAA1109 K562 ChIA-PET 22265404 KIAA1109 8285 1656 chr4 123462245 123465035 123463745 N NA NA KIAA1109 IMR90 Hi-C 24141950 KIAA1109 370487 1657 chr4 124364354 124366206 124365590 N NA SPRY1 SPATA5 IMR90 Hi-C 24141950 SPRY1 46398 1658 chr4 12641821 12642382 12642108 Y NA NA NA NA NA NA HSP90AB2P 692655 1659 chr4 128775004 128779169 128778248 N NA PLK4 NA NA NA NA PLK4 22847 1660 chr4 129473325 129475333 129474426 N NA NA LARP1B,PGRMC2,PHF17 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF17 255446 1661 chr4 132896666 132898327 132897372 N NA NA NA NA NA NA C4orf33 2881837 1662 chr4 140087976 140094799 140094524 N NA ELF2 ELF2,NAA15,NDUFC1 IMR90 Hi-C 24141950 ELF2 27370 1663 chr4 140096210 140100770 140097016,140099171 Y,N CCRN4L,RAB33B,ELF2;NA ELF2 ELF2,NAA15,C4orf49 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ELF2 35604 1664 chr4 140134668 140136394 140135419 N NA NA NAA15,ELF2,C4orf49,NDUFC1 IMR90 Hi-C 24141950 ELF2 74062 1665 chr4 144829618 144834218 144833237 N NA NA NA NA NA NA GUSBP5 348993 1666 chr4 146943409 146956140 146944892,146954564,146950811 Y,N,N NA;NA;NA NA ZNF827 MCF7 ChIA-PET 22265404 ZNF827 83802 1667 chr4 146972835 146985859 146976016,146980719,146983977 N,N,N NA;NA;NA NA MMAA,LSM6 IMR90 Hi-C 24141950 LSM6 110976 1668 chr4 147052731 147054980 147053648 N NA LSM6 NA NA NA NA LSM6 41855 1669 chr4 14855911 14859155 14858110 Y CPEB2 NA CPEB2,LOC441009 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CPEB2 145143 1670 chr4 151952130 151954899 151953452 N NA LRBA LRBA,RPS3A K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LRBA 15481 1671 chr4 151973077 151974008 151973717 N NA LRBA,RPS3A NA NA NA NA LRBA 36428 1672 chr4 152712543 152715586 152714434 N NA PET112 FBXW7,PET112,FAM160A1 IMR90 Hi-C 24141950 PET112 30368 1673 chr4 152719443 152726108 152720470 N NA PET112 FBXW7 IMR90 Hi-C 24141950 PET112 37268 1674 chr4 152801845 152811615 152803858,152809395 N,N NA;NA NA FBXW7,TMEM154 IMR90 Hi-C 24141950 PET112 119670 1675 chr4 153109227 153110926 153109773 N NA NA PET112 IMR90 Hi-C 24141950 FBXW7 192738 1676 chr4 153198224 153201508 153199939 N NA NA PET112,FAM160A1 IMR90 Hi-C 24141950 FBXW7 102156 1677 chr4 159972214 159974493 159973356 N NA NA C4orf45,FNIP2 IMR90 Hi-C 24141950 RAPGEF2 214505 1678 chr4 170213360 170216382 170214997 N NA SH3RF1 NEK1,SH3RF1 IMR90 Hi-C 24141950 SH3RF1 21111 1679 chr4 170261653 170264361 170262644 N NA NA CBR4,NEK1,SH3RF1 IMR90 Hi-C 24141950 SH3RF1 69404 1680 chr4 17092421 17096478 17094914 N NA NA LDB2 IMR90 Hi-C 24141950 QDPR 417379 1681 chr4 180547652 180547923 180547784 N NA NA NA NA NA NA AGA 2183995 1682 chr4 180978100 180981100 180979907 Y NA NA NA NA NA NA AGA 2614443 1683 chr4 181054935 181056510 181055502 N NA NA NA NA NA NA AGA 2691278 1684 chr4 182938931 182940961 182940379 N NA NA NA NA NA NA DCTD 897669 1685 chr4 183778773 183780430 183779696 N NA NA ODZ3,DCTD IMR90 Hi-C 24141950 DCTD 58200 1686 chr4 185180635 185212297 185186482,185189422,185196076,185204225,185209574 N,N,N,N,N NA;NA;NA;NA;NA NA IRF2,ENPP6,LOC728175,CASP3,ACSL1,CCDC111,MLF1IP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC728175 62833 1687 chr4 185417638 185429708 185428280,185427626 N,N NA;NA IRF2 LOC728175,IRF2 IMR90 Hi-C 24141950 IRF2 21912 1688 chr4 185433395 185438000 185435657 N NA IRF2 LOC728175,IRF2,CCDC111,CASP3 IMR90 Hi-C 24141950 IRF2 37669 1689 chr4 185456254 185460841 185458879,185458707 N,N NA;NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 60528 1690 chr4 190196981 190199160 190198244 N NA NA NA NA NA NA HSP90AA4P 195139 1691 chr4 190800483 190803293 190802512 N NA NA NA NA NA NA FRG1 58681 1692 chr4 190968401 190972183 190970781 N NA NA NA NA NA NA FRG1 106427 1693 chr4 25970884 25972782 25971984 N NA NA RBPJ,C4orf52,TBC1D19,STIM2,SEL1L3 IMR90 Hi-C 24141950 C4orf52 55070 1694 chr4 26029855 26033496 26031639 N NA NA RBPJ,TBC1D19,STIM2 IMR90 Hi-C 24141950 C4orf52 114041 1695 chr4 26084476 26087836 26085877 N NA NA RBPJ,TBC1D19 IMR90 Hi-C 24141950 C4orf52 168662 1696 chr4 26219011 26220961 26220258 Y RBPJ,RBPJ NA RBPJ,STIM2 IMR90 Hi-C 24141950 RBPJ 100371 1697 chr4 26288746 26291332 26290137 Y RBPJ,RBPJ RBPJ RBPJ IMR90 Hi-C 24141950 RBPJ 30000 1698 chr4 2764551 2766863 2766070 Y NA TNIP2,SH3BP2 TNIP2,NOP14-AS1,NOP14,MFSD10 K562,MCF7 ChIA-PET 22265404 TNIP2 6448 1699 chr4 2786328 2790638 2788530 N NA TNIP2,SH3BP2 SH3BP2,NOP14-AS1,MFSD10 MCF7,K562 ChIA-PET 22265404 SH3BP2 4112 1700 chr4 319971 325640 323744 N NA ZNF141 ZNF141 MCF7 ChIA-PET 22265404 ZNF141 5956 1701 chr4 35617 37435 36982 N NA ZNF718 ZNF718 IMR90 Hi-C 24141950 ZNF718 15842 1702 chr4 36254310 36260650 36256104,36257817 N,N NA;NA ARAP2 ARAP2 MCF7 ChIA-PET 22265404 ARAP2 8331 1703 chr4 37819281 37823525 37821460 N NA PGM2 TBC1D1,RELL1 IMR90 Hi-C 24141950 PGM2 4757 1704 chr4 38178432 38183231 38179546 N NA NA TBC1D1,KLF3,FLJ13197,FAM114A1,TLR6,TLR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBC1D1 285727 1705 chr4 38310037 38314322 38312216 Y KLF3 NA FLJ13197,KLF3,TBC1D1 IMR90 Hi-C 24141950 KLF3 351468 1706 chr4 38318802 38323851 38320643 Y NA NA FLJ13197,KLF3,TBC1D1,TLR10,PGM2,TLR6 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF3 341939 1707 chr4 38450728 38458585 38455037,38456944 N,N NA;NA NA NA NA NA NA KLF3 207205 1708 chr4 38502807 38506642 38505337 N NA NA FLJ13197,C4orf19,RELL1,KLF3 IMR90 Hi-C 24141950 KLF3 159148 1709 chr4 38524040 38527434 38525696 Y NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 138356 1710 chr4 38529944 38533698 38531481 N NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 132092 1711 chr4 39167542 39170172 39168903 N NA NA RFC1,KLHL5,WDR19,KLB IMR90 Hi-C 24141950 KLHL5 121091 1712 chr4 40184249 40187682 40185932 N NA RHOH RHOH IMR90 Hi-C 24141950 RHOH 10845 1713 chr4 40192140 40194175 40192497 N NA RHOH NA NA NA NA RHOH 4352 1714 chr4 40302434 40305906 40303780 Y PDS5A,N4BP2,RHOH NA N4BP2,LOC344967,RHOH,RBM47 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RHOH 103907 1715 chr4 40318081 40324090 40318887 N NA NA N4BP2,RHOH,RBM47,LOC344967,NSUN7,CHRNA9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RHOH 119554 1716 chr4 406204 407867 406891 N NA NA NA NA NA NA ZNF141 74608 1717 chr4 40657220 40660247 40658642 N NA RBM47 RBM47 IMR90 Hi-C 24141950 RBM47 25337 1718 chr4 40673390 40676614 40675129 Y RBM47 RBM47 RBM47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM47 41507 1719 chr4 40723343 40726723 40724427 N NA NA CHRNA9,RBM47,NSUN7,N4BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM47 91460 1720 chr4 49198824 49206387 49201742 N NA NA NA NA NA NA OCIAD2 290009 1721 chr4 54567527 54570614 54568819 N NA NA SCFD2,LNX1,PDGFRA,FIP1L1,RPL21P44,CHIC2 IMR90 Hi-C 24141950 RPL21P44 282835 1722 chr4 57622934 57625501 57624220 N NA NA PAICS,HOPX,THEGL IMR90 Hi-C 24141950 REST 148541 1723 chr4 63295994 63298451 63297435 N NA NA NA NA NA NA CENPC1 5112805 1724 chr4 68415814 68418950 68416301 N NA CENPC1,STAP1 CENPC1 K562 ChIA-PET 22265404 CENPC1 4558 1725 chr4 69440871 69442786 69442100 N NA NA NA NA NA NA YTHDC1 225047 1726 chr4 71540941 71547551 71542760 N NA IGJ,UTP3,RUFY3 NA NA NA NA UTP3 6645 1727 chr4 76622672 76624902 76623862 Y RCHY1,G3BP2,G3BP2 G3BP2,USO1 NA NA NA NA G3BP2 24005 1728 chr4 78113864 78116304 78114748 N NA CCNG2 CCNI,CCNG2,SHROOM3 IMR90 Hi-C 24141950 CCNG2 35507 1729 chr4 84139393 84142685 84141089 N NA NA PLAC8,COPS4,COQ2 IMR90 Hi-C 24141950 PLAC8 103482 1730 chr4 89240693 89242860 89241976 N NA PPM1K NA NA NA NA PPM1K 34805 1731 chr4 9153607 9157975 9155350 N NA NA NA NA NA NA METTL19 711075 1732 chr4 9171350 9173266 9172472 N NA NA NA NA NA NA METTL19 728818 1733 chr5 100114601 100117394 100116091 Y ST8SIA4,ST8SIA4 NA NA NA NA NA ST8SIA4 121593 1734 chr5 102088716 102102613 102091419 N NA NA PAM,PPIP5K2 IMR90 Hi-C 24141950 PAM 98914 1735 chr5 107147611 107150526 107148950 N NA NA FBXL17 IMR90 Hi-C 24141950 EFNA5 141015 1736 chr5 107856326 107860006 107857127 N NA NA FER,MAN2A1 IMR90 Hi-C 24141950 FER 223517 1737 chr5 111857943 111864574 111859291 N NA NA NA NA NA NA APC 178628 1738 chr5 112262949 112268284 112264280 N NA REEP5,DCP2 REEP5 MCF7,K562 ChIA-PET 22265404 REEP5 4918 1739 chr5 112304519 112306737 112305341 N NA REEP5,DCP2 APC,SRP19,REEP5,YTHDC2,MCC,DCP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DCP2 5670 1740 chr5 1130593 1136363 1130964,1134127 Y,N NA;NA SLC12A7 BRD9,LOC100506688,TRIP13,SLC12A7,NKD2,SLC6A18,CLPTM1L,MIR4457,ZDHHC11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC12A7 18421 1741 chr5 1137998 1141589 1140284 N NA SLC12A7 BRD9,LOC100506688,TRIP13,SLC12A7,NKD2,SLC6A18,CLPTM1L,MIR4457,ZDHHC11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC12A7 25826 1742 chr5 114821599 114824993 114823599 N NA NA TMED7-TICAM2,FEM1C IMR90 Hi-C 24141950 FEM1C 55598 1743 chr5 115948486 115952263 115949768 N NA SEMA6A NA NA NA NA SEMA6A 37935 1744 chr5 116008601 116010177 116009323 N NA NA LOC728342 IMR90 Hi-C 24141950 SEMA6A 98050 1745 chr5 116016159 116019656 116017495 N NA NA LOC728342 IMR90 Hi-C 24141950 SEMA6A 105608 1746 chr5 116030776 116034644 116032305 N NA NA NA NA NA NA SEMA6A 120225 1747 chr5 116097714 116102706 116099904,116100941 N,N NA;NA NA NA NA NA NA SEMA6A 187163 1748 chr5 116465836 116474023 116467004 N NA NA NA NA NA NA SEMA6A 555285 1749 chr5 118365889 118369595 118368143 N NA DMXL1 TNFAIP8,DMXL1 IMR90 Hi-C 24141950 DMXL1 37489 1750 chr5 124236896 124239264 124238132 N NA NA NA NA NA NA ZNF608 156091 1751 chr5 124255285 124259571 124257045 N NA NA NA NA NA NA ZNF608 174480 1752 chr5 124270068 124273971 124271493 N NA NA ZNF608 IMR90 Hi-C 24141950 ZNF608 189263 1753 chr5 124285864 124299532 124288285 N NA NA NA NA NA NA ZNF608 205059 1754 chr5 124340403 124341958 124341016 N NA NA NA NA NA NA ZNF608 259598 1755 chr5 124346148 124348342 124346922 N NA NA ZNF608 IMR90 Hi-C 24141950 ZNF608 265343 1756 chr5 124535415 124537822 124536387 N NA NA NA NA NA NA ZNF608 454610 1757 chr5 124746434 124749479 124747999 N NA NA ZNF608 IMR90 Hi-C 24141950 ZNF608 665629 1758 chr5 126082510 126086433 126083986 N NA LMNB1 MEGF10,LMNB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNB1 25882 1759 chr5 126092941 126101708 126094015,126097892 N,N NA;NA LMNB1 LMNB1 K562,MCF7 ChIA-PET 22265404 LMNB1 10607 1760 chr5 126563535 126567882 126565239 N NA NA MEGF10,LMNB1,C5orf63 IMR90 Hi-C 24141950 MARCH3 197095 1761 chr5 126920009 126925558 126921922,126925415 N,N NA;NA NA FBN2 IMR90 Hi-C 24141950 PRRC1 66700 1762 chr5 127263706 127273448 127272057 N NA NA FLJ33630,SLC12A2 MCF7 ChIA-PET 22265404 FLJ33630 145318 1763 chr5 131433711 131441025 131436666,131438795 N,N NA;NA NA PDLIM4,IL3,CSF2,P4HA2 IMR90 Hi-C 24141950 P4HA2 122531 1764 chr5 132368235 132370407 132369178 N NA ZCCHC10,HSPA4 ZCCHC10,HSPA4,AFF4 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZCCHC10 5995 1765 chr5 133158471 133162478 133160890 N NA NA FSTL4 IMR90 Hi-C 24141950 C5orf15 141928 1766 chr5 133258623 133267983 133265500 N NA C5orf15 FSTL4,HSPA4 IMR90 Hi-C 24141950 C5orf15 36423 1767 chr5 133403277 133409044 133407308,133404385 N,N NA;NA TCF7 TCF7 IMR90 Hi-C 24141950 TCF7 41358 1768 chr5 133425425 133442328 133436326 Y PPP2CA,PHF15,CDKL3,TCF7,TCF7 TCF7 TCF7,SKP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TCF7 8074 1769 chr5 133772159 133774534 133772941 N NA CDKN2AIPNL SKP1,CDKL3,UBE2B,CDKN2AIPNL,SAR1B,PHF15,SEC24A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 24561 1770 chr5 133800137 133803703 133802054 N NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 52539 1771 chr5 133837341 133840606 133839240 N NA PHF15 PHF15,UBE2B,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF15 21192 1772 chr5 137938485 137940416 137939380 N NA HSPA9 CTNNA1,SIL1,PAIP2,SLC23A1,HSPA9,LRRTM2,MATR3,MZB1,C5orf65 IMR90 Hi-C 24141950 HSPA9 27167 1773 chr5 138077048 138080038 138078133 Y NA CTNNA1 CTNNA1,SIL1,HSPA9,MATR3 IMR90 Hi-C 24141950 CTNNA1 9069 1774 chr5 138603145 138605664 138604591,138603836 N,N NA;NA MATR3 NA NA NA NA MATR3 3777 1775 chr5 138867115 138869445 138867734 N NA TMEM173 DNAJC18,SPATA24,UBE2D2,SLC23A1,TMEM173 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 4772 1776 chr5 138896431 138899645 138897683 Y MATR3,MATR3,DNAJC18,PSD2 TMEM173,UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 34088 1777 chr5 138902907 138935576 138905791,138923230,138911129,138931299 N,N,N,N NA;NA;NA;NA TMEM173,UBE2D2 DNAJC18,UBE2D2,SPATA24,C5orf65,TMEM173,ECSCR,PAIP2 IMR90 Hi-C 24141950 UBE2D2 5175 1778 chr5 139125986 139128914 139127305 N NA NA DNAJC18,UBE2D2,CXXC5 IMR90 Hi-C 24141950 CXXC5 97685 1779 chr5 139535920 139544827 139536879 N NA PURA,IGIP,CYSTM1 CYSTM1,NRG2,IGIP IMR90 Hi-C 24141950 CYSTM1 9826 1780 chr5 14108128 14110570 14108796 Y TRIO TRIO TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIO 33259 1781 chr5 141735385 141737642 141736718 Y ARHGAP26 NA NDFIP1,FGF1,SPRY4,GNPDA1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNF14 388983 1782 chr5 143184623 143188062 143186337 Y NR3C1,NR3C1,HMHB1 NA NR3C1,ARHGAP26 IMR90 Hi-C 24141950 YIPF5 362216 1783 chr5 148184068 148188057 148185431 N NA NA SH3TC2,ABLIM3 IMR90 Hi-C 24141950 FBXO38 420522 1784 chr5 149059938 149061140 149060393 N NA PPARGC1B CSF1R,PDE6A,PPARGC1B,ARHGEF37,HMGXB3,TIGD6,SLC26A2 IMR90 Hi-C 24141950 PPARGC1B 48675 1785 chr5 149839931 149842488 149840995 Y SYNPO,ZNF300 CD74,RPS14,NDST1 NDST1,SYNPO,RBM22,DCTN4,CAMK2A,ARSI,TCOF1,RPS14,CD74,MYOZ3,C5orf62 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RPS14 10612 1786 chr5 149857937 149860435 149859337 N NA RPS14,NDST1 SYNPO,MYOZ3,C5orf62,NDST1,RBM22,TCOF1 IMR90 Hi-C 24141950 NDST1 27239 1787 chr5 149864071 149881462 149865555,149869737,149867064 N,N,N NA;NA;NA RPS14,NDST1 NDST1,RBM22,MYOZ3,SYNPO,RPS14,CD74,DCTN4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDST1 6212 1788 chr5 14991852 14994719 14993338 N NA NA ANKH,FAM105B,LOC100130744 IMR90 Hi-C 24141950 ANKH 119965 1789 chr5 150612890 150623204 150613935,150618132,150620889 N,N,N NA;NA;NA CCDC69,GM2A ANXA6,CCDC69 IMR90 Hi-C 24141950 CCDC69 9236 1790 chr5 150993981 150996523 150995095 N NA NA FAT2,ATOX1,SLC36A1 IMR90 Hi-C 24141950 SPARC 70092 1791 chr5 152731578 152733371 152732511 N NA NA NA NA NA NA FAM114A2 685126 1792 chr5 152854089 152861551 152860223 N NA NA GRIA1 IMR90 Hi-C 24141950 FAM114A2 556946 1793 chr5 1535268 1537284 1536572 Y SLC12A7,LPCAT1 LPCAT1 LPCAT1,SLC6A3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LPCAT1 11192 1794 chr5 153882405 153884693 153883250 N NA NA HAND1 IMR90 Hi-C 24141950 SAP30L 56888 1795 chr5 156541630 156545179 156543733 N NA HAVCR2,MED7 HAVCR2 IMR90 Hi-C 24141950 HAVCR2 5382 1796 chr5 156598580 156600643 156599693 Y FNDC9,CYFIP2,CYFIP2,ITK MED7 NA NA NA NA MED7 28659 1797 chr5 157018820 157026453 157020145,157024539 N,N NA;NA ADAM19 SOX30,FNDC9,CYFIP2,NIPAL4,ADAM19,C5orf52,THG1L,LSM11 IMR90 Hi-C 24141950 ADAM19 16037 1798 chr5 158530666 158534305 158532505,158533853 N,N NA;NA EBF1 EBF1 IMR90 Hi-C 24141950 EBF1 3878 1799 chr5 159880704 159893154 159883171,159886376,159891564,159889402 N,Y,N,N NA;SLU7;NA;NA SLU7,PTTG1 MIR3142 IMR90 Hi-C 24141950 PTTG1 31839 1800 chr5 162745119 162746967 162745729 N NA NA NA NA NA NA CCNG1 117610 1801 chr5 163342422 163343566 163343163 N NA NA NA NA NA NA MAT2B 412191 1802 chr5 163784580 163788571 163785836 N NA NA NA NA NA NA MAT2B 854349 1803 chr5 169738284 169740646 169739884 N NA LCP2,LOC257358 LCP2,KCNIP1 IMR90 Hi-C 24141950 LCP2 13462 1804 chr5 169753659 169755316 169754412 N NA LCP2,LOC257358 LCP2,KCNIP1,LOC257358 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC257358 3119 1805 chr5 172203345 172206727 172204674 N NA DUSP1 DUSP1,ERGIC1,LOC100268168,ATP6V0E1,RPL26L1 IMR90 Hi-C 24141950 DUSP1 5142 1806 chr5 172232023 172235769 172234408 Y NA DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ERGIC1 25454 1807 chr5 173115680 173117777 173117066 N NA NA CPEB4 IMR90 Hi-C 24141950 BOD1 72014 1808 chr5 173162867 173166264 173164225 N NA NA CPEB4 IMR90 Hi-C 24141950 BOD1 119201 1809 chr5 173167566 173173540 173170441,173172467 N,N NA;NA NA CPEB4 IMR90 Hi-C 24141950 BOD1 123900 1810 chr5 17317160 17319474 17317986 N NA NA BASP1,LOC285696,LOC401177 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 BASP1 99410 1811 chr5 173249084 173251821 173249783 N NA NA BOD1,CPEB4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CPEB4 63510 1812 chr5 173255953 173258079 173257005 N NA NA BOD1,CPEB4,C5orf47 IMR90 Hi-C 24141950 CPEB4 57252 1813 chr5 173699461 173701686 173700169 N NA NA NA NA NA NA CPEB4 384130 1814 chr5 176550472 176553633 176551453 N NA NSD1 ZNF346,NSD1,PRELID1,RAB24 IMR90 Hi-C 24141950 NSD1 6447 1815 chr5 178225201 178226629 178225445 N NA NA NA NA NA NA ZNF354B 60325 1816 chr5 178953522 178958201 178957812 N NA RUFY1 NA NA NA NA RUFY1 19361 1817 chr5 178959839 178963016 178961844 N NA RUFY1 RUFY1,ADAMTS2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RUFY1 14546 1818 chr5 180523948 180524698 180524307 N NA NA NA NA NA NA TRIM41 125565 1819 chr5 180528569 180529472 180529077 N NA NA MGAT1 IMR90 Hi-C 24141950 TRIM41 120791 1820 chr5 180713938 180720003 180714561 N NA GNB2L1,TRIM52,LOC100132062 NA NA NA NA TRIM52 25819 1821 chr5 18735379 18747912 18746009 N NA NA NA NA NA NA BASP1 1517629 1822 chr5 21340064 21343736 21341938 N NA NA NA NA NA NA GUSBP1 115853 1823 chr5 34242732 34246770 34245034 N NA NA NA NA NA NA C1QTNF3-AMACR 118099 1824 chr5 34496991 34500420 34499443 Y NA NA TTC23L,RAI14,RAD1 IMR90 Hi-C 24141950 C1QTNF3-AMACR 372358 1825 chr5 37847625 37849165 37848206 N NA NA NA NA NA NA WDR70 468213 1826 chr5 42948908 42958620 42950534 N NA NA LOC648987,LOC153684 IMR90 Hi-C 24141950 LOC648987 60293 1827 chr5 43105281 43107212 43106028 Y NA LOC100132356,ZNF131 LOC153684,LOC100132356,ZNF131 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF131 14430 1828 chr5 43572976 43579339 43577636 N NA PAIP1,NNT PAIP1 K562,MCF7 ChIA-PET 22265404 PAIP1 15455 1829 chr5 45793234 45795442 45794239 N NA NA NA NA NA NA MRPS30 984207 1830 chr5 5004591 5027803 5005703,5008174,5018516 N,N,N NA;NA;NA LOC340094 NA NA NA NA LOC340094 6669 1831 chr5 543436 545654 544350 Y NA NA NA NA NA NA CEP72 66751 1832 chr5 55884014 55886266 55884970 N NA NA MAP3K1,SETD9 IMR90,HELA Hi-C,5C 24141950,22955621 MAP3K1 224634 1833 chr5 56789848 56791526 56790686 Y NA NA ACTBL2,PLK2 IMR90 Hi-C 24141950 GPBP1 320073 1834 chr5 61527577 61534226 61529375,61532588 N,N NA;NA NA NA NA NA NA KIF2A 67763 1835 chr5 61579675 61583147 61581362 N NA KIF2A KIF2A K562 ChIA-PET 22265404 KIF2A 18842 1836 chr5 64341980 64345298 64344737 N NA NA ADAMTS6,CWC27,CENPK IMR90 Hi-C 24141950 CWC27 277225 1837 chr5 64355153 64359311 64356727 N NA NA CWC27,ADAMTS6 IMR90 Hi-C 24141950 CWC27 290398 1838 chr5 64397635 64400766 64398917 Y NA NA ADAMTS6,CWC27,PPWD1,CENPK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CWC27 332880 1839 chr5 66511003 66512643 66511852 Y NA NA MAST4,PIK3R1 MCF7 ChIA-PET 22265404 PIK3R1 998941 1840 chr5 67433009 67435261 67434001 N NA NA NA NA NA NA PIK3R1 76323 1841 chr5 67726382 67732461 67730236 N NA NA PIK3R1 IMR90 Hi-C 24141950 PIK3R1 214798 1842 chr5 67737691 67743645 67739106,67741939 N,N NA;NA NA NA NA NA NA PIK3R1 226107 1843 chr5 67939785 67942243 67940952 N NA NA NA NA NA NA PIK3R1 428201 1844 chr5 68005144 68008121 68007067 N NA NA NA NA NA NA SLC30A5 381655 1845 chr5 68337854 68339801 68338789 Y NA SLC30A5 NA NA NA NA SLC30A5 49975 1846 chr5 69138614 69142334 69140378 N NA NA NA NA NA NA SERF1A 178738 1847 chr5 70013854 70017274 70015469 N NA NA NA NA NA NA SERF1A 179216 1848 chr5 70584439 70587553 70585532 N NA NA NA NA NA NA BDP1 163889 1849 chr5 71850809 71855776 71852574 N NA NA TNPO1,ZNF366,PTCD2 IMR90 Hi-C 24141950 PTCD2 234609 1850 chr5 77146654 77149680 77148201 N NA NA TBCA IMR90 Hi-C 24141950 TBCA 74469 1851 chr5 78022668 78025708 78023937 Y NA NA ARSB,SCAMP1,LHFPL2 IMR90 Hi-C 24141950 LHFPL2 78020 1852 chr5 79654113 79655583 79654691 N NA ZFYVE16 CMYA5 IMR90 Hi-C 24141950 ZFYVE16 48255 1853 chr5 81074136 81076429 81075277 N NA SSBP2 SSBP2,ZCCHC9,ATG10 IMR90 Hi-C 24141950 SSBP2 27064 1854 chr5 81145858 81150012 81147998 Y NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP2 98786 1855 chr5 83139729 83141961 83140448 N NA NA NA NA NA NA XRCC4 766412 1856 chr5 86315321 86316537 86316183 Y NA NA NA NA NA NA RASA1 247533 1857 chr5 87797779 87799486 87798708 N NA NA NA NA NA NA LOC100505894 233080 1858 chr5 88365883 88370118 88368407 N NA NA NA NA NA NA LOC100505894 801184 1859 chr5 88375001 88377964 88376882 N NA NA NA NA NA NA LOC100505894 810302 1860 chr5 88525957 88530831 88527955,88528098 N,N NA;NA NA NA NA NA NA LOC100505894 961258 1861 chr5 88562744 88570279 88564379,88567791 N,N NA;NA NA MEF2C IMR90 Hi-C 24141950 LOC100505894 998045 1862 chr5 88592084 88600905 88598123 N NA NA MEF2C IMR90 Hi-C 24141950 LOC100505894 1027385 1863 chr5 88602620 88606310 88604630 N NA NA NA NA NA NA LOC100505894 1037921 1864 chr5 88607925 88612215 88610156 N NA NA NA NA NA NA LOC100505894 1043226 1865 chr5 88635686 88642298 88638888 N NA NA NA NA NA NA CETN3 1063305 1866 chr5 88645116 88680218 88648401 N NA NA NA NA NA NA CETN3 1025385 1867 chr5 88690998 88728658 88692758 N NA NA MEF2C IMR90 Hi-C 24141950 CETN3 976945 1868 chr5 88729644 88739527 88731464 N NA NA NA NA NA NA CETN3 966076 1869 chr5 90575022 90577968 90576274 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 98196 1870 chr5 95165707 95173877 95171265 N NA GLRX RHOBTB3,GLRX,ARSK,RFESD,SPATA9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLRX 7130 1871 chr5 95178084 95179910 95179042 Y GLRX,ELL2 GLRX GLRX,SPATA9,RFESD,RHOBTB3,C5orf27 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GLRX 19507 1872 chr5 96151620 96153912 96152320 Y LNPEP,ERAP1 ERAP1 ERAP1 K562,MCF7 ChIA-PET 22265404 ERAP1 7728 1873 chr5 96204740 96207532 96206275 N NA ERAP2 RIOK2,CAST,ERAP1,LIX1,LNPEP,ERAP2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ERAP2 4112 1874 chr5 962610 965410 963987 Y NA NKD2 SLC12A7,TRIP13,BRD9,LOC100506688 IMR90 Hi-C 24141950 NKD2 43758 1875 chr5 98368155 98370188 98368851 N NA NA CHD1,LOC100289230 K562,MCF7 ChIA-PET 22265404 LOC100289230 103317 1876 chr5 99382572 99390552 99385094,99389141 N,N NA;NA NA NA NA NA NA ST8SIA4 848435 1877 chr6 100675918 100677396 100676957 Y NA NA SIM1 IMR90 Hi-C 24141950 ASCC3 651828 1878 chr6 105905050 105909319 105907222 Y NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 54051 1879 chr6 105929869 105933242 105931735 N NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 78870 1880 chr6 105939652 105944563 105941376,105943593 Y,N NA;NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 88653 1881 chr6 106007614 106010490 106008850 N NA NA PRDM1,ATG5 IMR90 Hi-C 24141950 PREP 156615 1882 chr6 106091389 106096454 106092300,106094476 N,Y NA;PRDM1 NA ATG5 IMR90 Hi-C 24141950 PREP 240390 1883 chr6 106438934 106443784 106440440,106442925 Y,Y PRDM1;PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 90411 1884 chr6 106587269 106596384 106589695,106590302,106594271 Y,N,N NA;NA;NA NA PRDM1,ATG5,LIN28B IMR90 Hi-C 24141950 PRDM1 53074 1885 chr6 106895136 106896523 106896042 N NA NA AIM1,RTN4IP1 IMR90 Hi-C 24141950 AIM1 63207 1886 chr6 110360231 110362408 110361187 N NA NA FIG4,AKD1,PPIL6,MICAL1,SMPD2,DDO,METTL24 IMR90 Hi-C 24141950 CDC40 139216 1887 chr6 111179755 111182100 111180731 Y CDK19,SLC16A10,AMD1,AMD1 CDK19,AMD1 CDK19,AMD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMD1 13887 1888 chr6 113883593 113887375 113886033 Y MARCKS NA FLJ34503,MARCKS IMR90 Hi-C 24141950 MARCKS 291152 1889 chr6 113928969 113976127 113947898,113944568,113953217,113955846,113956421,113967563,113975144 N,N,N,Y,Y,N,N NA;NA;NA;MARCKS;MARCKS;NA;NA NA MARCKS,FLJ34503,LOC285758,HDAC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MARCKS 202400 1890 chr6 114074993 114081501 114077180,114080197 N,Y NA;MARCKS NA LAMA4 IMR90 Hi-C 24141950 MARCKS 97026 1891 chr6 114082899 114087522 114084868 N NA NA LAMA4 IMR90 Hi-C 24141950 MARCKS 91005 1892 chr6 11458283 11463532 11460817 Y LOC221710,ERVFRD-1,NEDD9 NA NEDD9,C6orf228,ERVFRD-1 IMR90 Hi-C 24141950 TMEM170B 74979 1893 chr6 11492779 11497886 11497105 N NA TMEM170B NEDD9,LOC100506409,ELOVL2,ERVFRD-1,C6orf228,SYCP2L,GCM2,TMEM14C,PAK1IP1,C6orf52,TMEM170B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM170B 40625 1894 chr6 115035156 115044042 115036508,115039556 Y,N NA;NA NA NA NA NA NA HDAC2 742797 1895 chr6 11512595 11517273 11515756 N NA TMEM170B NEDD9,SYCP2L,C6orf228,ELOVL2,LOC100506409,GCM2 IMR90 Hi-C 24141950 TMEM170B 21238 1896 chr6 11784861 11787811 11786532 Y NA NA HIVEP1,ADTRP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIVEP1 224913 1897 chr6 11823553 11830106 11825471,11828600 N,Y NA;TMEM170B NA ADTRP,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 182618 1898 chr6 11831295 11837506 11833938 N NA NA HIVEP1,ADTRP IMR90 Hi-C 24141950 HIVEP1 175218 1899 chr6 11851559 11856760 11852486 N NA NA HIVEP1,ADTRP,TMEM170B,EDN1 IMR90 Hi-C 24141950 HIVEP1 155964 1900 chr6 11874823 11879145 11877364 Y TMEM170B NA ADTRP,TMEM170B,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 133579 1901 chr6 12335310 12336799 12336380 N NA EDN1 EDN1,TMEM170B MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EDN1 44781 1902 chr6 12367907 12371536 12370368 Y HIVEP1 NA NA NA NA NA EDN1 77378 1903 chr6 125666874 125668617 125667820 N NA HDDC2 HEY2 IMR90 Hi-C 24141950 HDDC2 43592 1904 chr6 12607198 12610320 12609089 N NA NA TMEM170B,EDN1,ADTRP,HIVEP1 IMR90 Hi-C 24141950 EDN1 316669 1905 chr6 127724099 127725993 127725456 N NA NA ECHDC1 IMR90 Hi-C 24141950 ECHDC1 59345 1906 chr6 130068210 130071891 130070489 N NA ARHGAP18 ARHGAP18,L3MBTL3 IMR90 Hi-C 24141950 ARHGAP18 36840 1907 chr6 130203127 130204600 130203971 N NA NA TMEM244 IMR90 Hi-C 24141950 ARHGAP18 171757 1908 chr6 130582503 130663656 130584667,130591569 N,N NA;NA NA L3MBTL3,EPB41L2,LOC100507203,TMEM200A IMR90 Hi-C 24141950 TMEM200A 94606 1909 chr6 134672254 134674119 134673015 N NA NA SGK1,ALDH8A1,LOC154092 IMR90 Hi-C 24141950 TBPL1 398946 1910 chr6 134692360 134696374 134694766 N NA NA ALDH8A1,SGK1,LOC154092 IMR90 Hi-C 24141950 TBPL1 419052 1911 chr6 134699494 134701123 134700297 Y SGK1,SGK1 NA ALDH8A1,LOC154092,SGK1,HBS1L,MIR3662 IMR90 Hi-C 24141950 TBPL1 426186 1912 chr6 135405950 135410753 135408676 N NA HBS1L HBS1L,MYB,AHI1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 HBS1L 29914 1913 chr6 135434486 135438799 135437151 N NA NA AHI1 IMR90 Hi-C 24141950 HBS1L 58450 1914 chr6 135449087 135451641 135450203 N NA NA AHI1,MYB IMR90 Hi-C 24141950 MYB 50812 1915 chr6 135466367 135468872 135467401 N NA MYB AHI1,MYB,MAP7,HBS1L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYB 33581 1916 chr6 135482025 135489677 135483879,135486663 N,N NA;NA MYB AHI1,MYB,BCLAF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MYB 12776 1917 chr6 135490764 135492919 135491906 N NA MYB AHI1,BCLAF1,MYB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MYB 9534 1918 chr6 137412973 137431175 137417537,137421230,137424059,137427059 N,N,N,N NA;NA;NA;NA NA IL22RA2,IL20RA IMR90 Hi-C 24141950 IFNGR1 109392 1919 chr6 137547834 137552966 137549184 N NA IFNGR1 IFNGR1 MCF7 ChIA-PET 22265404 IFNGR1 7267 1920 chr6 137601667 137607480 137603584,137605742 N,N NA;NA NA IL22RA2 IMR90 Hi-C 24141950 IFNGR1 61100 1921 chr6 137629897 137631374 137630676 N NA NA IFNGR1 MCF7 ChIA-PET 22265404 IFNGR1 89330 1922 chr6 138063695 138068162 138066873 N NA NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 120419 1923 chr6 138110215 138114799 138112860 Y NA NA TNFAIP3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 73782 1924 chr6 138120097 138122536 138120546,138121459 N,N NA;NA NA TNFAIP3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 66045 1925 chr6 138131070 138134219 138132697 Y TNFAIP3 NA TNFAIP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 54362 1926 chr6 138136691 138140138 138137006 Y NA TNFAIP3 TNFAIP3,PERP IMR90 Hi-C 24141950 TNFAIP3 48443 1927 chr6 138144373 138145994 138145100 N NA TNFAIP3 TNFAIP3,PERP IMR90 Hi-C 24141950 TNFAIP3 42587 1928 chr6 138239660 138242751 138241132 N NA NA PERP,TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 51079 1929 chr6 138243794 138250937 138247718,138249361 N,N NA;NA NA TNFAIP3,IFNGR1 IMR90 Hi-C 24141950 TNFAIP3 55213 1930 chr6 138259298 138268787 138261225,138266215 N,N NA;NA NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 70717 1931 chr6 138270193 138273116 138271943,138271759 N,N NA;NA NA TNFAIP3,PERP IMR90 Hi-C 24141950 TNFAIP3 81612 1932 chr6 140084947 140086846 140085877 Y CITED2,CITED2,CITED2 NA TXLNB,CITED2,LOC645434,LOC100132735 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CITED2 389162 1933 chr6 14073710 14076694 14075622 Y RANBP9,CD83 CD83 DTNBP1,RNF182 IMR90 Hi-C 24141950 CD83 40793 1934 chr6 140905856 140907995 140907390 N NA NA NA NA NA NA CITED2 1210071 1935 chr6 14092999 14096604 14094555 Y CD83 CD83 JARID2,DTNBP1,CCDC90A,RNF182,CD83 IMR90 Hi-C 24141950 CD83 20883 1936 chr6 14107149 14112220 14109693 N NA CD83 RNF182,CD83 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD83 5267 1937 chr6 141803874 141806609 141804894 Y NA NA NA NA NA NA VTA1 661801 1938 chr6 14209661 14213803 14211168 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD83 92174 1939 chr6 144535493 144538260 144537480 Y NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 STX11 63839 1940 chr6 145668546 145676206 145671609 N NA NA NA NA NA NA LOC100507557 379799 1941 chr6 14727305 14731167 14729709 N NA NA DTNBP1,JARID2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 515360 1942 chr6 14732310 14734847 14732877 Y NA NA DTNBP1,JARID2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 511680 1943 chr6 149021619 149023826 149022135 Y SASH1 UST LOC100128176,UST IMR90 Hi-C 24141950 UST 44445 1944 chr6 14910019 14912646 14911114 Y JARID2 NA JARID2 IMR90 Hi-C 24141950 JARID2 333881 1945 chr6 149429219 149435406 149432581 N NA NA ZC3H12D,TAB2 IMR90 Hi-C 24141950 TAB2 204030 1946 chr6 149449045 149450879 149450299 N NA NA ZC3H12D,TAB2,PPIL4 IMR90 Hi-C 24141950 TAB2 188557 1947 chr6 149459188 149462889 149461516 N NA NA NA NA NA NA TAB2 176547 1948 chr6 149530727 149535907 149532190,149534282 N,N NA;NA NA TAB2 IMR90 Hi-C 24141950 TAB2 103529 1949 chr6 15022872 15027005 15023774 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 219522 1950 chr6 152116 158127 155490 N NA NA FOXF2,IRF4 IMR90 Hi-C 24141950 DUSP22 133974 1951 chr6 154924235 154929160 154927774 Y SCAF8 NA NA NA NA NA SCAF8 125352 1952 chr6 155653110 155658168 155654801 N NA TFB1M ARID1B,TFB1M,NOX3 IMR90 Hi-C 24141950 TFB1M 17493 1953 chr6 155670744 155677659 155672204,155674275 N,N NA;NA TFB1M NOX3 IMR90 Hi-C 24141950 TFB1M 35127 1954 chr6 156599654 156602195 156600633 N NA NA NA NA NA NA ARID1B 496869 1955 chr6 156972376 156974496 156973601 N NA NA NA NA NA NA ARID1B 124568 1956 chr6 157006343 157014346 157008325,157012369 Y,N ARID1B;NA NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 84718 1957 chr6 157015129 157022889 157018446 N NA NA ARID1B,MIR4466 IMR90 Hi-C 24141950 ARID1B 76175 1958 chr6 157039279 157046529 157041250 Y ARID1B NA ARID1B,MIR4466 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ARID1B 52535 1959 chr6 158184284 158186901 158185579 Y SNX9 NA SNX9,TMEM242,ZDHHC14,SYNJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GTF2H5 402478 1960 chr6 158646490 158660284 158653133 N NA NA TULP4,SYTL3,DYNLT1,TMEM181 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF2H5 57111 1961 chr6 15900176 15903806 15901726 N NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 225511 1962 chr6 15905263 15909030 15906275 N NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 220287 1963 chr6 159288038 159292607 159288435,159290887 N,N NA;NA EZR OSTCP1,C6orf99,EZR K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZR 47582 1964 chr6 159526632 159529074 159528361 N NA NA RSPH3 K562 ChIA-PET 22265404 TAGAP 60448 1965 chr6 15988673 15990934 15989801 N NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 138383 1966 chr6 160349883 160353650 160352276 N NA IGF2R NA NA NA NA IGF2R 36481 1967 chr6 161195857 161197617 161196913 N NA NA NA NA NA NA MAP3K4 215205 1968 chr6 167311079 167321777 167321018 N NA RNASET2 RPS6KA2 IMR90 Hi-C 24141950 RNASET2 48300 1969 chr6 167503398 167509440 167506353,167507687 Y,Y RNASET2,CCR6;RNASET2,GPR31,CCR6,CCR6 CCR6 NA NA NA NA CCR6 15855 1970 chr6 170921051 170925326 170921689 N NA PDCD2 NA NA NA NA PDCD2 27271 1971 chr6 17715126 17718821 17715536 Y NUP153 NUP153 NUP153,KIF13A IMR90 Hi-C 24141950 NUP153 8308 1972 chr6 180148 192533 180903,190124,186223 N,N,N NA;NA;NA NA IRF4,DUSP22,EXOC2 IMR90 Hi-C 24141950 DUSP22 99568 1973 chr6 20319648 20321102 20320148 N NA NA E2F3 IMR90 Hi-C 24141950 E2F3 81035 1974 chr6 208084 238247 219393,208536,227373,232248,236213 N,N,Y,N,Y NA;NA;NA;NA;NA NA DUSP22,EXOC2,IRF4 IMR90 Hi-C 24141950 DUSP22 53854 1975 chr6 21586393 21590030 21588602 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 3942 1976 chr6 22321226 22325335 22322707 N NA NA CDKAL1,SOX4,LINC00340,LOC729177,PRL IMR90 Hi-C 24141950 SOX4 727254 1977 chr6 22362514 22366024 22363979 N NA NA SOX4 IMR90 Hi-C 24141950 SOX4 768542 1978 chr6 24741834 24744867 24743832 N NA C6orf62,GMNN GMNN,FAM65B,KIAA0319,CMAHP,C6orf62 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C6orf62 22431 1979 chr6 24928079 24939162 24929284,24937184,24937304,24932388 N,N,N,N NA;NA;NA;NA FAM65B FAM65B,CMAHP IMR90 Hi-C 24141950 FAM65B 16884 1980 chr6 24946286 24952238 24946477,24949403 N,N NA;NA FAM65B FAM65B IMR90 Hi-C 24141950 FAM65B 35091 1981 chr6 24973325 24977487 24977088 N NA NA FAM65B IMR90 Hi-C 24141950 FAM65B 62130 1982 chr6 25001541 25008464 25007049 Y TDP2,C6orf62 NA FAM65B IMR90 Hi-C 24141950 FAM65B 90346 1983 chr6 25032149 25044887 25035683,25042453 N,N NA;NA NA FAM65B,CMAHP IMR90 Hi-C 24141950 CMAHP 93164 1984 chr6 25052308 25057700 25054356,25056773 N,N NA;NA NA FAM65B,GMNN IMR90 Hi-C 24141950 CMAHP 80351 1985 chr6 26294224 26298064 26295971 N NA NA HIST1H2AG,HIST1H2BJ,HIST1H2BE,HIST1H4D,HIST1H2BD,HIST1H2AE,HIST1H2BF,HIST1H3D,HIST1H2BG,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4F,HIST1H4G,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A2,BTN2A1,LOC285819,BTN1A1,HMGN4,HCG11,HIST1H1D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BTN3A2 67334 1986 chr6 26304512 26306908 26305511 N NA NA HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 58490 1987 chr6 26341350 26343362 26342418 N NA BTN3A2,BTN2A2 HIST1H4F,HIST1H1D,ABT1,HMGN4,HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,BTN2A2,HIST1H2AH,MIR3143,LOC285819,BTN2A1,HCG11,BTN3A3,BTN1A1,HIST1H2BI,HIST1H3G,BTN3A2,BTN2A3P,HIST1H4H,BTN3A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 22036 1988 chr6 26568567 26570057 26569090 N NA HCG11,HMGN4,ABT1 BTN2A1,LOC285819,HIST1H2AE,HIST1H2BG,ABT1,HCG11,HIST1H2BD,HIST1H1E,HMGN4,HIST1H2BF,HIST1H3D K562 ChIA-PET 22265404 ABT1 27114 1989 chr6 26571112 26574846 26572206 N NA HCG11,HMGN4,ABT1 BTN2A1,LOC285819,ABT1,HIST1H2AE,HIST1H2BG,HCG11,HIST1H2BD,HIST1H1E,HMGN4,HIST1H2BF,HIST1H3D,HIST1H4E,HIST1H2BK,HIST1H4I K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ABT1 22325 1990 chr6 26576847 26578370 26577590 N NA HMGN4,ABT1 ABT1,HIST1H2BK,HIST1H4I,HIST1H2BG,HIST1H2AE,HCG11,HMGN4 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ABT1 18801 1991 chr6 27063757 27066114 27064972 N NA HIST1H2BK NA NA NA NA HIST1H2BK 48523 1992 chr6 27155395 27157575 27156024 N NA HIST1H2BK HIST1H2BO,HIST1H2AM,OR2B2,LOC100507173,HIST1H4J,HIST1H3J,HIST1H2BK,MIR3143,HIST1H2AH,HIST1H2AI,HIST1H3H,HIST1H2BL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIST1H2BK 40758 1993 chr6 27204577 27207059 27205391 Y NA NA OR2B2,LOC100131289,ZNF184 IMR90 Hi-C 24141950 HIST1H2BK 89940 1994 chr6 27444963 27447972 27447013 Y NA ZNF184 ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF184 4066 1995 chr6 27512332 27514109 27513450 Y NA NA HIST1H2AH,HIST1H2BK,MIR3143,HIST1H2AM,HIST1H3J,HIST1H2BO,HIST1H2BL,HIST1H3H,HIST1H2AI,ZNF391,ZNF184 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF184 71435 1996 chr6 27520121 27521695 27520946 N NA NA HIST1H2BO,HIST1H2AM,HIST1H2AI,HIST1H3H,HIST1H2BL,ZNF184,HIST1H2BJ,HIST1H2AG K562 ChIA-PET 22265404 ZNF184 79224 1997 chr6 27639100 27641500 27640315 Y NA LOC100507173 ZNF391,PRSS16 IMR90 Hi-C 24141950 LOC100507173 20314 1998 chr6 27647434 27649619 27648972 N NA LOC100507173 NA NA NA NA LOC100507173 12195 1999 chr6 27704304 27707156 27706262 Y NA LOC100507173 NA NA NA NA LOC100507173 42490 2000 chr6 27719941 27722354 27721094 N NA NA HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,HIST1H2AH,MIR3143,LOC100131289,POM121L2,ZNF184,LOC100507173,HIST1H2AM,HIST1H2BO,HIST1H3I,HIST1H4L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100507173 58127 2001 chr6 28414533 28415586 28414935 N NA ZSCAN12,ZSCAN23 NA NA NA NA ZSCAN23 3254 2002 chr6 28659577 28660773 28659590 N NA NA NA NA NA NA TRIM27 230995 2003 chr6 28710079 28710887 28710811 Y NA NA NA NA NA NA TRIM27 180881 2004 chr6 28908246 28909741 28909153 N NA TRIM27 TRIM27,LOC401242,ZNF311 IMR90 Hi-C 24141950 TRIM27 16478 2005 chr6 3053318 3055564 3054093 N NA RIPK1 MYLK4,WRNIP1,DKFZP686I15217,NQO2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RIPK1 21494 2006 chr6 3065584 3070578 3069186 N NA RIPK1,BPHL NQO2,LOC100507194,WRNIP1 K562 ChIA-PET 22265404 RIPK1 6480 2007 chr6 30748731 30752354 30749824 N NA FLOT1,IER3 CCHCR1,PSORS1C1,PSORS1C2,FLOT1,PRRC2A,C6orf15,MUC22,DHX16,PPP1R18,TUBB,MDC1,IER3,NRM,MRPS18B,PPP1R10,DDR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER3 36404 2008 chr6 30761013 30763561 30761695 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PRR3,PPP1R10,KIAA1949,KIAA1949,PBMUCL1,HLA-C,FLOT1,IER3 IER3 FLOT1,C6orf15,PSORS1C1,DHX16,PPP1R18,TUBB,NRM,MDC1,DDR1,IER3,DPCR1,SFTA2,VARS2,C6orf136,GTF2H4,MUC22,PSORS1C3,TCF19,POU5F1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IER3 48686 2009 chr6 30844320 30846644 30845404 Y PPP1R10,KIAA1949,KIAA1949,IER3 DDR1,GTF2H4,VARS2 NA NA NA NA DDR1 5217 2010 chr6 31153096 31155572 31153769 N NA CCHCR1,TCF19,POU5F1,HCG27 NA NA NA NA HCG27 9965 2011 chr6 31275110 31278274 31276647 N NA HLA-C,HLA-B MUC22,PSORS1C1,C6orf15,PSORS1C2,CCHCR1,HCG26 IMR90 Hi-C 24141950 HLA-C 35197 2012 chr6 31356203 31358270 31357002 N NA HLA-B,MICA NA NA NA NA MICA 9291 2013 chr6 32403240 32405317 32404606 N NA HLA-DRA TAP2,C6orf10,HLA-DRA,HLA-DQB2,HLA-DQA2 IMR90 Hi-C 24141950 HLA-DRA 2302 2014 chr6 32439138 32443381 32441451 N NA HLA-DRA HLA-DRB1 IMR90 Hi-C 24141950 HLA-DRA 31519 2015 chr6 32570683 32579939 32572423,32576769,32577730 Y,N,Y GPSM3,HLA-DRA,HLA-DRB5,TAP2,PSMB9,PSMB8,PSMB8,HLA-DQB2,HLA-DQA2,HLA-DPB1,HLA-DPA1,HLA-DOB,HLA-DOA,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DRB1,HLA-DQB1;NA;GPSM3,HLA-DRA,HLA-DRB5,TAP2,TAP1,PSMB9,PSMB8,PSMB8,HLA-DQB2,HLA-DQA2,HLA-DPB1,HLA-DPA1,HLA-DOB,HLA-DOA,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DRB1,HLA-DQB1,HLA-DQA1 HLA-DRB6,HLA-DRB1,HLA-DQA1 NA NA NA NA HLA-DRB1 13070 2016 chr6 32588336 32598394 32590498,32595833 N,N NA;NA HLA-DRB1,HLA-DQA1,HLA-DQB1 HLA-DRB1 IMR90 Hi-C 24141950 HLA-DQA1 6789 2017 chr6 32656584 32658647 32657593 N NA HLA-DQB1 NA NA NA NA HLA-DQB1 22118 2018 chr6 32984356 32988820 32986877,32985600 Y,Y HLA-DRB5,HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,TAP2,PSMB8,PSMB8,TAP1,PSMB9,TAPBP,PHF1,HLA-DPB1,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DOA;HLA-DRB5,HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,TAP2,PSMB8,TAP1,HLA-DPB1,HLA-DPA1,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,HLA-DOA BRD2,HLA-DOA HLA-DPB1,HLA-DPA1,HLA-DPB2,COL11A2,VPS52 IMR90 Hi-C 24141950 HLA-DOA 6967 2019 chr6 32994745 32999240 32997415,32995729 Y,N HLA-DRB5,HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,TAP2,PSMB8,PSMB8,TAP1,PSMB9,TAPBP,PHF1,HLA-DPB1,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DOA;NA HLA-DOA,HLA-DPB1,HLA-DPA1 HLA-DPB2,VPS52,HLA-DPB1,BRD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HLA-DOA 17356 2020 chr6 33311348 33314445 33312759 N NA RGL2,TAPBP,ZBTB22,DAXX,KIFC1 TAPBP,ZBTB22,DAXX,KIFC1,PHF1,CUTA,SYNGAP1 IMR90 Hi-C 24141950 DAXX 20555 2021 chr6 33871421 33874387 33872833 N NA NA NA NA NA NA LEMD2 114515 2022 chr6 34149308 34151943 34150804 Y HMGA1 NA C6orf106,NUDT3,RPS10-NUDT3,PACSIN1,MNF1,ANKS1A,SPDEF,HMGA1,IP6K3,MLN,LEMD2,GRM4,UHRF1BP1,TAF11,SNRPC,C6orf1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HMGA1 52634 2023 chr6 34190121 34193268 34191860 Y C6orf1,HMGA1 HMGA1,C6orf1 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 HMGA1 11309 2024 chr6 36136157 36137767 36136992 N NA MAPK13,BRPF3 ETV7,LHFPL5,SLC26A8,PNPLA1 IMR90 Hi-C 24141950 BRPF3 26783 2025 chr6 36631497 36638277 36632754,36634993 N,Y NA;MTCH1,CDKN1A,CDKN1A,CDKN1A,CDKN1A CDKN1A CDKN1A,SRSF3,MIR3925,CPNE5,PPIL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN1A 5960 2026 chr6 37016864 37024678 37017943 Y SRSF3,CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2 FGD2 CPNE5,C6orf89,FGD2,PIM1,TMEM217,TBC1D22B IMR90 Hi-C 24141950 FGD2 43441 2027 chr6 37482511 37486866 37484580 Y NA CCDC167 CCDC167,MDGA1,RNF8,FTSJD2,TBC1D22B,MIR4462,ZFAND3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC167 14811 2028 chr6 37672582 37674632 37673571 N NA NA MDGA1 K562,MCF7 ChIA-PET 22265404 ZFAND3 112675 2029 chr6 37743950 37753118 37751433,37745301 Y,Y NA;NA ZFAND3 BTBD9,ZFAND3,FTSJD2,MDGA1,CCDC167 IMR90 Hi-C 24141950 ZFAND3 34189 2030 chr6 41285478 41288791 41286752 Y NFYA,TFEB,TREML4,TREM1 NA C6orf130 K562 ChIA-PET 22265404 TREML2 116553 2031 chr6 41471180 41473727 41472210 Y NA FOXP4 FOXP4 IMR90 Hi-C 24141950 FOXP4 40437 2032 chr6 41488877 41501442 41499976 N NA FOXP4 FOXP4 IMR90,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 FOXP4 12722 2033 chr6 42472480 42476748 42474029 N NA NA TRERF1,GUCA1A,MRPS10,GUCA1B IMR90 Hi-C 24141950 TRERF1 52697 2034 chr6 42737637 42763684 42738921,42742574,42745099,42750198,42752727 Y,N,N,N,N CUL9,TRERF1,UBR2,TBCC,CNPY3,C6orf226;NA;NA;NA;NA TBCC,KIAA0240 KIAA0240,GUCA1A,UBR2,ATP6V0CP3,PRPH2,RPL7L1,TBCC,C6orf226,TRERF1,PTCRA,PPP2R5D,KLHDC3,MEA1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TBCC 23753 2035 chr6 43345240 43385849 43347064,43351776,43360493 N,Y,N NA;NA;NA ZNF318,ABCC10 TJAP1,SLC22A7,C6orf108,TTBK1,ZNF318,ABCC10,DLK2,POLR1C,YIPF3,LRRC73,POLH,CUL9,CRIP3,XPO5 IMR90 Hi-C 24141950 ZNF318 8059 2036 chr6 433626 438284 434946 N NA IRF4 IRF4 IMR90 Hi-C 24141950 IRF4 41887 2037 chr6 43691072 43694545 43692964 Y TJAP1,MAD2L1BP MRPS18A,VEGFA MRPS18A,LOC100132354,RSPH9,MRPL14,CAPN11,TMEM63B,POLH,VEGFA,XPO5,MAD2L1BP,GTPBP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPS18A 35523 2038 chr6 43700614 43704826 43701987 Y TJAP1,GTPBP2,MAD2L1BP MRPS18A,VEGFA TMEM63B,MRPS18A,LOC100132354,CAPN11,POLH,XPO5,RSPH9,VEGFA,C6orf223,MRPL14,SLC29A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 VEGFA 33120 2039 chr6 43944097 43946252 43945442 Y NFKBIE C6orf223 MRPS18A,VEGFA,LOC100132354,POLH,MAD2L1BP,RSPH9,GTPBP2,C6orf223 IMR90 Hi-C 24141950 C6orf223 22085 2040 chr6 47381742 47383610 47382816 N NA NA CD2AP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD2AP 61915 2041 chr6 52160149 52163943 52161751 N NA MCM3 TMEM14A,PAQR8,MCM3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MCM3 10567 2042 chr6 52167038 52175022 52170630 Y NA MCM3 PAQR8,MCM3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MCM3 17456 2043 chr6 52181925 52184905 52183364 N NA MCM3,PAQR8 PAQR8,MCM3 IMR90 Hi-C 24141950 MCM3 32343 2044 chr6 52216200 52218430 52217247 N NA PAQR8 PAQR8,MCM3,EFHC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PAQR8 8496 2045 chr6 52459195 52461742 52460212 Y TRAM2 TRAM2 EFHC1,TRAM2,MCM3,ICK,LOC730101 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TRAM2 17333 2046 chr6 53222420 53225962 53224276 Y NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 8443 2047 chr6 53412162 53414101 53412906 Y GCLC NA NA NA NA NA ELOVL5 198185 2048 chr6 56690019 56718318 56715756,56707605 N,N NA;NA NA DST,BAG2 IMR90 Hi-C 24141950 DST 182325 2049 chr6 56754968 56756828 56755800 N NA NA PRIM2,BAG2,BEND6,ZNF451,DST,RAB23,KIAA1586 IMR90 Hi-C 24141950 KIAA1586 154556 2050 chr6 64061797 64064381 64062793 Y NA NA PTP4A1,EYS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTP4A1 217539 2051 chr6 6683273 6686687 6684889 N NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 LY86-AS1 60214 2052 chr6 6711615 6713836 6712956 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 LY86-AS1 88556 2053 chr6 6797668 6801843 6799813 N NA NA RREB1 IMR90 Hi-C 24141950 LY86-AS1 174609 2054 chr6 6810895 6812468 6811560 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 LY86-AS1 187836 2055 chr6 6856167 6858470 6857025 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 LY86-AS1 233108 2056 chr6 6927740 6929314 6928250 Y RREB1,RREB1 NA NA NA NA NA RREB1 178516 2057 chr6 6930988 6932406 6931773 N NA NA NA NA NA NA RREB1 175424 2058 chr6 6942235 6944515 6943262 N NA NA NA NA NA NA RREB1 163315 2059 chr6 7050545 7053649 7051788 N NA NA RREB1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RREB1 54181 2060 chr6 709878 711997 711181 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 16769 2061 chr6 74097012 74099303 74098947 N NA NA MTO1 K562 ChIA-PET 22265404 MB21D1 62740 2062 chr6 78175604 78177508 78176143 N NA NA NA NA NA NA IRAK1BP1 1399681 2063 chr6 86394639 86402452 86395600 N NA SYNCRIP,SNHG5 SNORD50A,SNHG5 K562 ChIA-PET 22265404 SNHG5 6188 2064 chr6 88433909 88437528 88435535 N NA AKIRIN2 AKIRIN2-AS1,AKIRIN2 K562,MCF7 ChIA-PET 22265404 AKIRIN2 21924 2065 chr6 88504992 88507865 88506477 N NA NA NA NA NA NA AKIRIN2 93007 2066 chr6 88508385 88510701 88509166 N NA NA NA NA NA NA AKIRIN2 96400 2067 chr6 88541057 88544815 88542226 N NA NA NA NA NA NA AKIRIN2 129072 2068 chr6 88613049 88618554 88614451,88616661 N,N NA;NA NA ANKRD6 IMR90 Hi-C 24141950 AKIRIN2 201064 2069 chr6 88633263 88637297 88635131,88635182 N,N NA;NA NA RNGTT IMR90 Hi-C 24141950 AKIRIN2 221278 2070 chr6 88638719 88641682 88639704 N NA NA RNGTT IMR90 Hi-C 24141950 AKIRIN2 226734 2071 chr6 88881612 88890052 88888489 N NA CNR1 NA NA NA NA CNR1 5845 2072 chr6 89201521 89205671 89204515 N NA NA NA NA NA NA CNR1 325754 2073 chr6 89208846 89211299 89210152 N NA NA NA NA NA NA CNR1 333079 2074 chr6 89269734 89272842 89271165 N NA NA NA NA NA NA CNR1 393967 2075 chr6 89275182 89278657 89276507 N NA NA NA NA NA NA RNGTT 394691 2076 chr6 9519565 9523009 9521149 N NA NA LOC100130275,TFAP2A,LINC00518 IMR90 Hi-C 24141950 LOC100130275 889542 2077 chr7 100124836 100127954 100125299 N NA TSC22D4,AGFG2,SAP25 NA NA NA NA AGFG2 8880 2078 chr7 100433147 100437941 100435109 N NA SLC12A9,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC12A9 12417 2079 chr7 101382488 101388331 101387499,101384086 N,N NA;NA NA CUX1,EMID2,SH2B2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CUX1 70853 2080 chr7 102353057 102355270 102354111 N NA POLR2J2,FAM185A FBXL13,ARMC10 IMR90 Hi-C 24141950 FAM185A 34129 2081 chr7 102382386 102385904 102383049 N NA FAM185A NA NA NA NA FAM185A 3495 2082 chr7 104580567 104586854 104585648,104581665 Y,N MLL5;NA LOC100216546 LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100216546 44758 2083 chr7 105984805 105988943 105988077 Y FLJ36031,NAMPT NA NAMPT,CCDC71L,PIK3CG K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 NAMPT 59167 2084 chr7 106063713 106068012 106065884 Y NA NA NAMPT,CCDC71L,CDHR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAMPT 138075 2085 chr7 106192339 106194492 106193560 N NA NA CCDC71L,NAMPT IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC71L 107142 2086 chr7 106360210 106362000 106361282 Y NA NA CCDC71L,NAMPT IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC71L 58576 2087 chr7 111221129 111222603 111221536 N NA NA NA NA NA NA ZNF277 624040 2088 chr7 112030808 112033184 112032121 N NA IFRD1 DOCK4,ZNF277,IFRD1 IMR90 Hi-C 24141950 IFRD1 30015 2089 chr7 115783625 115787050 115785534 N NA NA MET IMR90 Hi-C 24141950 TES 63497 2090 chr7 128553289 128560217 128554848 N NA LOC100130705,IRF5 TNPO3,TPI1P2,FAM71F1,KCP,TSPAN33,IRF5,LOC407835 IMR90 Hi-C 24141950 IRF5 17777 2091 chr7 128729047 128731230 128729890 N NA TNPO3,TPI1P2 TNPO3,AHCYL2,IRF5,TPI1P2,KCP,FAM71F1,LOC407835,TSPAN33,SMO,CCDC136,CALU IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TPI1P2 33770 2092 chr7 128740856 128743750 128742549 N NA TNPO3,TPI1P2,TSPAN33 TNPO3,AHCYL2,IRF5,KCP,CCDC136,TSPAN33,LOC407835,CALU,SMO,FAM40B IMR90 Hi-C 24141950 TSPAN33 40962 2093 chr7 139928989 139931994 139930797 Y TBXAS1,JHDM1D NA JHDM1D,LOC100134229 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARP12 165468 2094 chr7 148636885 148639625 148638446 Y NA NA EZH2,CUL1,ZNF786,ZNF398,ZNF425 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EZH2 55444 2095 chr7 150359803 150362128 150361191 N NA GIMAP6,GIMAP2 NA NA NA NA GIMAP2 20666 2096 chr7 150363690 150367037 150365726 Y ACTR3C,GIMAP8,GIMAP7,GIMAP4,GIMAP6,LOC100128542,GIMAP5,GIMAP2,GIMAP1 GIMAP6,GIMAP2,GIMAP1-GIMAP5 NA NA NA NA GIMAP2 15757 2097 chr7 152271076 152273870 152272124 N NA NA LOC100128822,XRCC2,FABP5P3,MLL3 MCF7 ChIA-PET 22265404 XRCC2 99380 2098 chr7 154995810 155001622 154997551 N NA NA INSIG1,LOC202781,PAXIP1 K562,MCF7 ChIA-PET 22265404 INSIG1 87864 2099 chr7 155135280 155137728 155136767 N NA INSIG1 INSIG1,PAXIP1,LOC100132707,LOC100128264,HTR5A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INSIG1 45794 2100 chr7 157094344 157097130 157095281 N NA DNAJB6 UBE3C,DNAJB6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 32581 2101 chr7 157110119 157115810 157111189 Y NA DNAJB6 UBE3C,DNAJB6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 13901 2102 chr7 158768606 158770917 158769609 N NA NA NCAPG2 IMR90 Hi-C 24141950 WDR60 119337 2103 chr7 17107735 17110904 17109145 N NA NA AHR IMR90 Hi-C 24141950 AHR 227372 2104 chr7 17164331 17171231 17166538,17170125 N,Y NA;AHR NA NA NA NA NA AHR 167045 2105 chr7 17173471 17176882 17174621 N NA NA NA NA NA NA AHR 161394 2106 chr7 17272541 17276082 17273940 Y AHR NA AHR IMR90 Hi-C 24141950 AHR 62194 2107 chr7 17421777 17423079 17422428 N NA NA NA NA NA NA AHR 83501 2108 chr7 17441086 17443969 17442475 N NA NA AHR IMR90 Hi-C 24141950 AHR 102810 2109 chr7 20274787 20279783 20277718 N NA MACC1 MACC1 K562 ChIA-PET 22265404 MACC1 17774 2110 chr7 20303912 20307236 20304481 N NA MACC1 NA NA NA NA MACC1 46899 2111 chr7 20320979 20325439 20323471 N NA ITGB8 MACC1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ITGB8 45286 2112 chr7 20328081 20333281 20330826 N NA ITGB8 MACC1,TMEM196 IMR90 Hi-C 24141950 ITGB8 37444 2113 chr7 20335720 20341223 20338429 N NA ITGB8 TMEM196,MACC1 IMR90 Hi-C 24141950 ITGB8 29502 2114 chr7 21384170 21386823 21385367 N NA NA NA NA NA NA SP4 80866 2115 chr7 21391095 21397154 21392397,21395271 N,N NA;NA NA NA NA NA NA SP4 70535 2116 chr7 22122202 22124387 22123064 Y NA NA RAPGEF5 IMR90 Hi-C 24141950 CDCA7L 136660 2117 chr7 23273686 23275461 23274502 N NA NA NA NA NA NA NUPL2 52240 2118 chr7 25895708 25898052 25896775 Y NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 293795 2119 chr7 25932497 25933533 25932698 N NA NA HOXA9,HOXA10-HOXA9,HOXA11,HOXA-AS5,SNX10,HOXA5,HOXA-AS3,HOXA7,HOXA6,LOC441204,MIR196B,HOXA3,HOXA4,HOTTIP,HOXA13,NFE2L3,HNRNPA2B1,CBX3,HOXA2,HOXA1,HOTAIRM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 258314 2120 chr7 26003166 26009674 26004389,26007589 Y,N NA;NA NA MIR148A MCF7 ChIA-PET 22265404 NFE2L3 182173 2121 chr7 26140204 26151993 26141279 Y SNX10,SNX10,SNX10,HNRNPA2B1 NFE2L3 NFE2L3,HOXA10-HOXA9,HOXA9,CBX3,HNRNPA2B1,HOXA3,HOXA4 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 NFE2L3 39854 2122 chr7 26436724 26440102 26438500 N NA NA LOC441204 MCF7,K562 ChIA-PET 22265404 SNX10 105209 2123 chr7 28893016 28894418 28893655 N NA NA CREB5 IMR90 Hi-C 24141950 TAX1BP1 1114024 2124 chr7 2902023 2905267 2903462 Y LFNG,LFNG,TTYH3,GNA12 GNA12 GNA12,AMZ1,FOXK1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 GNA12 18064 2125 chr7 3102271 3104908 3102905 N NA CARD11 SDK1 IMR90 Hi-C 24141950 CARD11 18762 2126 chr7 3133895 3135716 3134846 N NA NA SDK1,CARD11 IMR90 Hi-C 24141950 CARD11 50386 2127 chr7 35763049 35772222 35768963,35764706,35770254 Y,N,N HERPUD2;NA;NA HERPUD2 SEPT7 IMR90 Hi-C 24141950 HERPUD2 28277 2128 chr7 36096339 36098291 36097564 N NA NA EEPD1 IMR90 Hi-C 24141950 SEPT7 255743 2129 chr7 37805108 37807327 37805942 N NA NA NA NA NA NA ELMO1 316213 2130 chr7 38349958 38353265 38351064 N NA LOC100506776 LOC100506776 IMR90 Hi-C 24141950 LOC100506776 27913 2131 chr7 38362788 38377604 38375321 N NA LOC100506776 STARD3NL,LOC100506776 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506776 3574 2132 chr7 41849034 41851214 41850016 N NA NA LOC285954,C7orf10 IMR90 Hi-C 24141950 C7orf25 1100475 2133 chr7 41919871 41923178 41921500 Y INHBA NA LOC285954,C7orf10,INHBA IMR90 Hi-C 24141950 C7orf25 1028511 2134 chr7 43110692 43113323 43111937 N NA NA HECW1 IMR90 Hi-C 24141950 MRPL32 138753 2135 chr7 43773641 43777898 43775056 N NA C7orf44,BLVRA C7orf44,BLVRA K562 ChIA-PET 22265404 C7orf44 4558 2136 chr7 47091820 47092678 47092353 N NA NA IGFBP3 IMR90 Hi-C 24141950 HUS1 926544 2137 chr7 50304717 50308691 50307311 N NA IKZF1 NA NA NA NA IKZF1 35687 2138 chr7 50311243 50314171 50312512 N NA IKZF1 IKZF1 IMR90 Hi-C 24141950 IKZF1 30207 2139 chr7 50320227 50325037 50321741,50323558 Y,N NA;NA IKZF1 IKZF1 IMR90 Hi-C 24141950 IKZF1 19341 2140 chr7 50331211 50334298 50333059 N NA IKZF1 IKZF1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 IKZF1 10080 2141 chr7 53932835 53935164 53933444 N NA NA NA NA NA NA SEC61G 891775 2142 chr7 5465808 5471061 5469661 Y NA TNRC18 TNRC18,FBXL18,ACTB,WIPI2,SLC29A4,RNF216 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TNRC18 2631 2143 chr7 55376023 55379819 55377014 N NA NA LANCL2 IMR90 Hi-C 24141950 LANCL2 53322 2144 chr7 5575950 5585434 5581524,5578554 N,N NA;NA FBXL18,ACTB,FSCN1 RNF216 IMR90 Hi-C 24141950 ACTB 5718 2145 chr7 5591959 5599710 5596412 Y CCZ1,ACTB FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 21727 2146 chr7 55953877 55961583 55955402 N NA NA GBAS IMR90 Hi-C 24141950 MRPS17 58028 2147 chr7 5608579 5613833 5609882 Y SLC29A4,TNRC18,FBXL18,FSCN1 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FSCN1 18603 2148 chr7 6119823 6122424 6121196 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 20963 2149 chr7 63765854 63769211 63767772 N NA ZNF736 NA NA NA NA ZNF736 3975 2150 chr7 64460796 64468391 64467137 N NA CCT6P3 ZNF117,CCT6P3 K562,MCF7 ChIA-PET 22265404 CCT6P3 30341 2151 chr7 65273371 65295856 65274737 N NA LOC441242,VKORC1L1 LOC441242,VKORC1L1,LINC00174 IMR90 Hi-C 24141950 LOC441242 37574 2152 chr7 65508560 65510683 65509218 N NA ASL ASL,CRCP,TPST1,KCTD7 IMR90 Hi-C 24141950 ASL 30093 2153 chr7 65519075 65522620 65520780 N NA ASL KCTD7,ASL,TPST1,CRCP,LINC00174 IMR90 Hi-C 24141950 ASL 18156 2154 chr7 65956899 65969582 65958626 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 73916 2155 chr7 65981361 65985612 65984256 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 57886 2156 chr7 66140831 66197103 66147042,66194707 N,N NA;NA KCTD7,RABGEF1 KCTD7,ASL,CRCP,RABGEF1,LOC493754,C7orf42,LOC729156 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RABGEF1 8540 2157 chr7 73426786 73428912 73427446 N NA NA ELN,CLIP2,EIF4H,WBSCR28,VPS37D,WBSCR27,CLDN3,ABHD11-AS1,ABHD11,CLDN4,LIMK1 IMR90 Hi-C 24141950 LIMK1 69195 2158 chr7 73687691 73701652 73698969 N NA RFC2,CLIP2 RFC2,LAT2,CLIP2,EIF4H IMR90 Hi-C 24141950 CLIP2 2153 2159 chr7 74057323 74059805 74058246 N NA GTF2I GTF2I K562,MCF7 ChIA-PET 22265404 GTF2I 12225 2160 chr7 75470850 75473996 75472377 N NA RHBDD2 STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR,CCL24 IMR90 Hi-C 24141950 RHBDD2 34321 2161 chr7 75794312 75797863 75795999 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 116919 2162 chr7 75993063 75995114 75993847 Y NA YWHAG,ZP3 YWHAG MCF7 ChIA-PET 22265404 YWHAG 4721 2163 chr7 76572083 76579019 76573932 N NA DTX2P1-UPK3BP1-PMS2P11 NA NA NA NA DTX2P1-UPK3BP1-PMS2P11 31120 2164 chr7 7982820 7985908 7984393 Y GLCCI1 GLCCI1 RPA3,LOC729852 IMR90 Hi-C 24141950 GLCCI1 22466 2165 chr7 81553783 81555799 81554407 N NA NA NA NA NA NA PHTF2 4125674 2166 chr7 86758158 86760855 86759299 N NA DMTF1 DMTF1 K562 ChIA-PET 22265404 DMTF1 20822 2167 chr7 86771180 86775024 86773785,86773691 N,N NA;NA DMTF1 KIAA1324L,DMTF1 K562,MCF7 ChIA-PET 22265404 DMTF1 6653 2168 chr7 90223152 90235410 90226024 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CDK14 103302 2169 chr7 92532548 92535999 92534172 N NA NA FAM133B IMR90 Hi-C 24141950 CDK6 66607 2170 chr8 101420971 101424973 101423150 N NA NA SPAG1,RNF19A,ANKRD46,MIR4471 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19A 98644 2171 chr8 101441747 101444160 101443237 N NA NA RNF19A,SPAG1,MIR4471 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNF19A 119420 2172 chr8 101448182 101458647 101450395,101455429,101457552 Y,Y,Y RNF19A;PABPC1,SPAG1,SPAG1,RNF19A,RNF19A;NA NA SPAG1 IMR90 Hi-C 24141950 ANKRD46 113365 2173 chr8 101472794 101480095 101475580 N NA NA SPAG1,RNF19A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD46 91917 2174 chr8 102120280 102122988 102121451 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 NA YWHAZ,FLJ42969,ZNF706 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 ZNF706 94972 2175 chr8 102137685 102140349 102139091 N NA NA YWHAZ,FLJ42969,ZNF706,PABPC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 77611 2176 chr8 102148764 102151057 102149674 Y PABPC1,YWHAZ,YWHAZ,YWHAZ,YWHAZ,ZNF706,ZNF706 NA YWHAZ,FLJ42969,ZNF706 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 66903 2177 chr8 103139832 103143133 103141172 N NA NCALD NA NA NA NA NCALD 2697 2178 chr8 103467423 103470503 103468541 N NA UBR5 UBR5 IMR90 Hi-C 24141950 UBR5 42506 2179 chr8 103535600 103549788 103548277,103541971 N,N NA;NA ODF1 UBR5,ODF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ODF1 14060 2180 chr8 103593576 103600127 103595770,103598230 N,N NA;NA ODF1 UBR5,KLF10,ODF1,AZIN1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ODF1 29728 2181 chr8 10367330 10370903 10369127 N NA NA PRSS55 IMR90 Hi-C 24141950 PINX1 326396 2182 chr8 103800091 103803822 103801454,103803700 Y,N NA;NA NA UBR5,KLF10,ODF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AZIN1 72575 2183 chr8 103806162 103810938 103807819 N NA NA KLF10,UBR5,ODF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AZIN1 65459 2184 chr8 103895903 103928013 103898161,103911398,103902341 N,N,N NA;NA;NA AZIN1 KCNH5,ATP6V1C1,BAALC,AZIN1 MCF7,IMR90,K562 ChIA-PET,Hi-C 19890323,24141950,22265404 AZIN1 19506 2185 chr8 103936370 103939461 103937404 N NA NA AZIN1,ATP6V1C1 IMR90 Hi-C 24141950 AZIN1 59973 2186 chr8 11336868 11343711 11341159,11337766 N,N NA;NA FAM167A,BLK C8orf12,BLK,FAM167A IMR90 Hi-C 24141950 BLK 7810 2187 chr8 11734618 11737405 11735727 Y CTSB CTSB CTSB,BLK,FDFT1,FAM167A,GATA4 IMR90 Hi-C 24141950 CTSB 8972 2188 chr8 11753719 11757099 11754919 Y CTSB CTSB CTSB,FAM167A,BLK,NEIL2,GATA4,FDFT1 IMR90 Hi-C 24141950 CTSB 28073 2189 chr8 123485454 123488053 123486600 N NA NA NA NA NA NA ZHX2 305848 2190 chr8 125209180 125210939 125210204 Y FAM91A1,TMEM65,RNF139 NA TMEM65,FAM91A1,FER1L6,FER1L6-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRMT12 252109 2191 chr8 126399932 126403200 126401008 N NA TRIB1 TRIB1,NSMCE2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TRIB1 39363 2192 chr8 126613096 126622189 126617116,126614395,126620278 N,N,N NA;NA;NA NA NSMCE2,KIAA0196,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 170533 2193 chr8 126648194 126651811 126649129 N NA NA NSMCE2,KIAA0196,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 205631 2194 chr8 126709591 126712685 126710794 N NA NA NSMCE2,TRIB1,KIAA0196 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 267028 2195 chr8 128189970 128194501 128191741 N NA NA MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYC 553814 2196 chr8 128195154 128202528 128196968,128200973 Y,N NA;NA NA NA NA NA NA MYC 545787 2197 chr8 128206813 128211619 128209304 Y NA NA LOC727677,MYC IMR90 Hi-C 24141950 MYC 536696 2198 chr8 128216900 128230557 128221080,128224979,128228286 N,N,Y NA;NA;NA NA LOC727677,MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYC 517758 2199 chr8 128233798 128240511 128238389 N NA NA LOC727677,MYC,PVT1 IMR90 Hi-C 24141950 MYC 507804 2200 chr8 128298792 128302697 128300769 N NA NA NA NA NA NA MYC 445618 2201 chr8 128310673 128322775 128313632,128319920 Y,Y NA;NA NA NA NA NA NA MYC 425540 2202 chr8 128566926 128573553 128568969,128571657 N,N NA;NA NA LOC727677 IMR90 Hi-C 24141950 MYC 174762 2203 chr8 128574341 128583136 128578538 N NA NA LOC727677 IMR90 Hi-C 24141950 MYC 165179 2204 chr8 128629554 128630703 128629710 N NA NA MYC MCF7 ChIA-PET 22265404 MYC 117612 2205 chr8 130557404 130568858 130560142,130564838,130567072 Y,N,Y NA;NA;FAM49B NA NA NA NA NA FAM49B 460039 2206 chr8 134419370 134421092 134420006 N NA NA TG,NDRG1,WISP1,PHF20L1,ST3GAL1 IMR90 Hi-C 24141950 ST3GAL1 163091 2207 chr8 135730398 135734342 135731597 N NA ZFAT ST3GAL1,ZFAT IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFAT 5106 2208 chr8 135828575 135846475 135844756 N NA NA MIR30D,ZFAT,MIR30B K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZFAT 103283 2209 chr8 141473487 141476167 141474927 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 TRAPPC9 4809 2210 chr8 142094706 142102242 142099715 Y EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 36478 2211 chr8 142103835 142108367 142106262 N NA DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 30353 2212 chr8 142112187 142120253 142114941,142117133 N,N NA;NA DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 18467 2213 chr8 142120960 142132576 142126755 N NA DENND3 PTK2,DENND3,SLC45A4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 6144 2214 chr8 142241648 142250019 142249104 N NA NA SLC45A4 MCF7 ChIA-PET 22265404 DENND3 102928 2215 chr8 143534629 143536420 143534896 N NA NA BAI1,TSNARE1 MCF7 ChIA-PET 22265404 TSNARE1 50086 2216 chr8 143895560 143898641 143897566 N NA NA C8orf55,LOC100288181,LYNX1,LY6D,PSCA,JRK,SLURP1,LY6E,LOC100133669 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C8orf55 86939 2217 chr8 1693383 1695010 1693942 Y CLN8 CLN8 ARHGEF10,CLN8,MIR596,KBTBD11,ZNF596 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLN8 16860 2218 chr8 22828562 22834323 22832307 N NA NA BIN3,PEBP4,LOC254896,TNFRSF10B,RHOBTB2,C8orf58,KIAA1967 IMR90 Hi-C 24141950 LOC286059 91419 2219 chr8 23365659 23367200 23366481 Y NA SLC25A37 SLC25A37,NKX3-1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC25A37 19163 2220 chr8 2582451 2587247 2585619 N NA NA NA NA NA NA CLN8 870581 2221 chr8 2589803 2593879 2591303 Y NA NA NA NA NA NA CLN8 877933 2222 chr8 26297412 26299928 26299575 N NA NA BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2 IMR90 Hi-C 24141950 BNIP3L 56889 2223 chr8 26304710 26317286 26306446 N NA NA BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DPYSL2 54423 2224 chr8 28257389 28261730 28259124,28259755 N,N NA;NA ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 13412 2225 chr8 29222802 29225725 29224412 N NA DUSP4 C8orf75,MIR3148,DUSP4 IMR90 Hi-C 24141950 DUSP4 14535 2226 chr8 29228549 29235117 29230725 N NA DUSP4 C8orf75,LOC286135,MIR3148,MIR548O2,TMEM66,LEPROTL1,DUSP4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 20282 2227 chr8 29258755 29260867 29259980 N NA NA C8orf75,DUSP4,LOC286135,MIR3148,MIR548O2,LEPROTL1 IMR90 Hi-C 24141950 DUSP4 50488 2228 chr8 29264150 29268288 29266691 N NA NA C8orf75,DUSP4,LOC286135,MIR3148,TMEM66,MIR548O2,LEPROTL1 IMR90 Hi-C 24141950 DUSP4 55883 2229 chr8 29346157 29350647 29348073 Y KIF13B,DUSP4,DUSP4 NA C8orf75,LOC286135,MIR3148,DUSP4,MIR548O2,TMEM66 IMR90 Hi-C 24141950 DUSP4 137890 2230 chr8 29354917 29358768 29356762 N NA NA LOC286135,C8orf75,MIR3148,MIR548O2,TMEM66,DUSP4 IMR90 Hi-C 24141950 DUSP4 146650 2231 chr8 29377047 29381195 29378554 N NA NA C8orf75,MIR3148,DUSP4,LOC286135,TMEM66,MIR548O2 IMR90 Hi-C 24141950 DUSP4 168780 2232 chr8 29384438 29389938 29387300 N NA NA C8orf75,MIR3148,DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 176171 2233 chr8 29629062 29633724 29631809 Y NA NA C8orf75,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM66 306925 2234 chr8 30767933 30772537 30769442 N NA NA WRN,TEX15,PPP2CB,PURG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2CB 97581 2235 chr8 32830269 32833658 32831186 N NA NA NA NA NA NA FUT10 497006 2236 chr8 37000020 37003760 37002514 Y NA NA KCNU1,PROSC,ZNF703,ERLIN2,LOC728024,GPR124 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERLIN2 590337 2237 chr8 37759600 37762946 37760879 N NA RAB11FIP1 RAB11FIP1 MCF7,K562 ChIA-PET 22265404 RAB11FIP1 2585 2238 chr8 42122179 42125198 42123564 N NA IKBKB IKBKB K562 ChIA-PET 22265404 IKBKB 3622 2239 chr8 49425610 49428246 49427564 Y SNAI2 NA SNAI2 IMR90 Hi-C 24141950 UBE2V2 504615 2240 chr8 50163164 50166353 50164340 N NA NA NA NA NA NA UBE2V2 1242169 2241 chr8 52873732 52876214 52874638 N NA NA NA NA NA NA PCMTD1 61997 2242 chr8 56763637 56775603 56773589 N NA LYN LYN IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LYN 16783 2243 chr8 59221614 59223598 59222701 N NA NA NA NA NA NA UBXN2B 100225 2244 chr8 60909948 60913791 60911636 N NA NA NA NA NA NA RAB2A 515678 2245 chr8 61560131 61567574 61564913,61566204 N,N NA;NA CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 23750 2246 chr8 61806823 61809018 61807410 N NA NA NA NA NA NA CHD7 215499 2247 chr8 61811868 61813795 61812443 N NA NA CHD7,LOC100130298 IMR90 Hi-C 24141950 CHD7 220544 2248 chr8 61814853 61819622 61816595 N NA NA NA NA NA NA CHD7 223529 2249 chr8 61820228 61831656 61822315,61824901,61829218 N,Y,Y NA;NA;CHD7 NA CHD7 IMR90 Hi-C 24141950 CHD7 228904 2250 chr8 61840969 61845028 61844087,61841908 N,Y NA;CHD7 NA CHD7 IMR90 Hi-C 24141950 CHD7 249645 2251 chr8 62007012 62017079 62008360,62010736 N,N NA;NA NA CHD7 IMR90 Hi-C 24141950 CHD7 415688 2252 chr8 62051000 62079068 62052383 N NA NA NA NA NA NA CHD7 459676 2253 chr8 64309512 64313004 64311650 N NA NA NA NA NA NA YTHDF3 228391 2254 chr8 64327838 64337097 64330870,64334726 N,N NA;NA NA NA NA NA NA YTHDF3 246717 2255 chr8 65774088 65778193 65776913 N NA NA NA NA NA NA CYP7B1 62740 2256 chr8 65826761 65830293 65828534 N NA NA NA NA NA NA CYP7B1 115413 2257 chr8 66789657 66795208 66791734 Y PDE7A PDE7A PDE7A IMR90 Hi-C 24141950 PDE7A 35688 2258 chr8 66852685 66866175 66862591,66865688,66857114,66858371 Y,N,N,N PDE7A;NA;NA;NA NA PDE7A MCF7 ChIA-PET 22265404 PDE7A 98716 2259 chr8 66892996 66896282 66894356 Y PDE7A NA DNAJC5B IMR90 Hi-C 24141950 PDE7A 139027 2260 chr8 66921158 66923993 66922636 N NA NA DNAJC5B MCF7 ChIA-PET 22265404 PDE7A 167189 2261 chr8 67034966 67037250 67036445 Y NA NA NA NA NA NA PDE7A 280997 2262 chr8 71452230 71454904 71453068 N NA NA NCOA2 IMR90 Hi-C 24141950 TRAM1 65790 2263 chr8 76315308 76322384 76319732,76321322,76316787 N,N,N NA;NA;NA NA NA NA NA NA GDAP1 1052690 2264 chr8 76663834 76666625 76665004 N NA NA NA NA NA NA PEX2 1246655 2265 chr8 80649089 80650961 80650137 N NA HEY1 TPD52,MRPS28 IMR90 Hi-C 24141950 HEY1 29137 2266 chr8 80695040 80698715 80696105 N NA HEY1 MRPS28,HEY1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEY1 14942 2267 chr8 80802345 80805025 80803633 N NA NA HEY1,MRPS28 IMR90 Hi-C 24141950 HEY1 122247 2268 chr8 8126771 8144453 8141714,8144060 N,Y NA;NA FLJ10661 FLJ10661,SGK223,CLDN23,MFHAS1,ERI1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FLJ10661 40679 2269 chr8 82044043 82046058 82045067 Y PAG1 PAG1 PAG1 IMR90 Hi-C 24141950 PAG1 19740 2270 chr8 8246074 8251971 8247907 N NA SGK223 FLJ10661 IMR90 Hi-C 24141950 SGK223 6817 2271 chr8 8405603 8408032 8406146 N NA NA SGK223,FLJ10661 IMR90 Hi-C 24141950 SGK223 166346 2272 chr8 8471715 8486135 8473284,8476104,8483865 N,N,N NA;NA;NA NA SGK223,FLJ10661,MFHAS1 IMR90 Hi-C 24141950 SGK223 232458 2273 chr8 8488360 8510275 8499099,8489644 N,N NA;NA NA SGK223,MFHAS1,FLJ10661 IMR90 Hi-C 24141950 MFHAS1 240856 2274 chr8 90726175 90743537 90741624 Y OSGIN2,RIPK2 RIPK2 RIPK2,NBN,DECR1,OSGIN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RIPK2 26438 2275 chr8 90848048 90850528 90849230 Y RIPK2,OSGIN2 NA OSGIN2,NBN,RIPK2,DECR1 IMR90 Hi-C 24141950 OSGIN2 63568 2276 chr8 95001862 95005327 95003806 Y NA NA LINC00535,RBM12B,RAD54B,CDH17,GEM IMR90 Hi-C 24141950 PDP1 72779 2277 chr8 95971973 96017331 95976183,95972924 Y,N PLEKHF2;NA TP53INP1,C8orf38 C8orf69,TP53INP1,CCNE2,C8orf37,LOC100616530,PLEKHF2,MIR3150B,MIR3150A,C8orf38 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TP53INP1 10358 2278 chr8 96127005 96130935 96128125 N NA PLEKHF2 PLEKHF2,C8orf69,C8orf38,C8orf37,MIR3150A,MIR3150B,LOC100616530 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PLEKHF2 15014 2279 chr8 98594145 98598603 98596879 N NA NA CPQ,PTDSS1,SDC2 IMR90 Hi-C 24141950 MTDH 57804 2280 chr8 98639151 98642568 98640933 N NA MTDH C8orf47,HRSP12 IMR90 Hi-C 24141950 MTDH 13839 2281 chr8 98649282 98653778 98651802 N NA MTDH NA NA NA NA MTDH 2629 2282 chr8 99375070 99378826 99377177 N NA NA POP1,STK3,NIPAL2,KCNS2 IMR90 Hi-C 24141950 POP1 245549 2283 chr9 100565254 100566594 100565818 Y CORO2A,FOXE1 NA FOXE1,C9orf156 IMR90 Hi-C 24141950 XPA 105563 2284 chr9 101942146 101951314 101944063,101946821 Y,N ALG2;NA ALG2,SEC61B ERP44,INVS,TEX10,NR4A3,SEC61B,ALG2 IMR90 Hi-C 24141950 ALG2 32932 2285 chr9 102014410 102018036 102015916 Y NA ALG2,SEC61B ALG2,SEC61B,NR4A3,LOC441461,STX17,ERP44,TEX10 IMR90 Hi-C 24141950 SEC61B 29840 2286 chr9 102021494 102023364 102021905 Y NA ALG2,SEC61B ALG2,SEC61B,NR4A3,LOC441461,STX17,ERP44,TEX10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SEC61B 36924 2287 chr9 102195078 102197254 102196023 Y TGFBR1,NR4A3 NA NA NA NA NA SEC61B 210508 2288 chr9 103172820 103175424 103174061 Y NA NA C9orf30-TMEFF1,TEX10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TEX10 57561 2289 chr9 105206027 105209026 105207815 N NA NA NA NA NA NA RNF20 909894 2290 chr9 105256814 105261165 105259591 N NA NA NA NA NA NA RNF20 960681 2291 chr9 117750827 117752804 117751823 Y DFNB31,ATP6V1G1,TNFSF15,TNFSF8 NA DFNB31,LOC100505478,TNFSF15,TNFSF8,C9orf91 IMR90 Hi-C 24141950 C9orf91 377121 2292 chr9 123833658 123835794 123834344 Y TRAF1,TRAF1,CNTRL CNTRL CNTRL,TRAF1,MEGF9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CNTRL 14780 2293 chr9 126079326 126092489 126080312,126085200,126089093 N,N,N NA;NA;NA STRBP STRBP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STRBP 48471 2294 chr9 126098418 126108279 126098868,126102251,126106238,126108110 N,N,N,N NA;NA;NA;NA NA RC3H2,RABGAP1,MIR600HG,STRBP,CRB2,DENND1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STRBP 67563 2295 chr9 126758624 126762908 126759775,126761840 N,N NA;NA NA DENND1A,LHX2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND1A 66207 2296 chr9 126897458 126903564 126899907 N NA NA DENND1A,NEK6,PSMB7,LOC100129034 IMR90 Hi-C 24141950 NEK6 116321 2297 chr9 126957421 126967485 126959922,126962517,126962554,126964887 Y,N,N,Y DENND1A;NA;NA;NA NA NEK6,DENND1A,LOC100129034,PSMB7 IMR90 Hi-C 24141950 NEK6 52400 2298 chr9 126976325 126977473 126976428 N NA NEK6 NEK6,LOC100129034,PSMB7,DENND1A IMR90 Hi-C 24141950 NEK6 42412 2299 chr9 127000066 127007455 127001878,127005135 N,N NA;NA NEK6 NEK6,DENND1A IMR90 Hi-C 24141950 NEK6 12430 2300 chr9 130769366 130772302 130770313 Y SLC25A25,NAIF1,DPM2,FAM102A FAM102A FAM102A,SLC25A25,NAIF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM102A 26554 2301 chr9 130786548 130789833 130789051 N NA FAM102A,NAIF1,SLC25A25 SLC25A25,NAIF1,FAM102A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAIF1 39766 2302 chr9 132032887 132034806 132033650 N NA NA LOC100506190,C9orf50,PTGES,C9orf106,IER5L,METTL11A,TOR1A,TOR1B,SH3GLB2,DOLPP1,PPP2R4,CRAT IMR90,MCF7,GM12878,HELA,K562 Hi-C,ChIA-PET,5C 24141950,22265404,22955621 IER5L 92347 2303 chr9 132144980 132147631 132146073 Y FAM73B,C9orf106,USP20,USP20,TOR1B,C9orf78,ASB6 NA LOC100506190,C9orf50,METTL11A,C9orf106,SH3GLB2,PPP2R4,CRAT,IER5L,PTGES IMR90,K562,GM12878,HELA,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 LOC100506190 103308 2304 chr9 132174727 132178007 132176102 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 72932 2305 chr9 132222008 132225069 132222717 N NA LOC100506190 PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 25870 2306 chr9 134247444 134250284 134248918 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 55193 2307 chr9 134268313 134280126 134269689 N NA PRRC2B PRRC2B,NUP214,FAM78A,PPAPDC3,POMT1,UCK1 IMR90 Hi-C 24141950 PRRC2B 25351 2308 chr9 135897200 135900547 135898699 N NA GTF3C5,CEL GTF3C5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF3C5 5515 2309 chr9 137820589 137826217 137821830 N NA NA LOC100130954 IMR90 Hi-C 24141950 MRPS2 566266 2310 chr9 15527008 15528511 15527681 N NA PSIP1 NA NA NA NA PSIP1 16005 2311 chr9 1757775 1762636 1759690 N NA NA NA NA NA NA SMARCA2 252706 2312 chr9 1869177 1882651 1875591,1880762 N,N NA;NA NA NA NA NA NA SMARCA2 132691 2313 chr9 1911696 1931990 1930150 N NA NA NA NA NA NA SMARCA2 83352 2314 chr9 19228978 19233821 19230717 N NA NA DENND4C,PLIN2 IMR90 Hi-C 24141950 DENND4C 56928 2315 chr9 1937412 1941216 1939542 N NA NA NA NA NA NA SMARCA2 74126 2316 chr9 19997015 20000727 19999353 N NA NA MLLT3,KIAA1797 IMR90 Hi-C 24141950 ACER2 588090 2317 chr9 20639437 20642134 20640784 N NA MLLT3,KIAA1797 KIAA1797,IFNB1 IMR90 Hi-C 24141950 KIAA1797 16175 2318 chr9 21094883 21097703 21096451 Y KIAA1797 NA MLLT3,KIAA1797 IMR90 Hi-C 24141950 PTPLAD2 63248 2319 chr9 22912607 22914670 22913753 N NA NA NA NA NA NA CDKN2A 918117 2320 chr9 33201796 33203137 33202677 Y NA B4GALT1 SMU1,B4GALT1,SPINK4 IMR90 Hi-C 24141950 B4GALT1 34440 2321 chr9 36452839 36459310 36458370 N NA NA RNF38,MELK IMR90 Hi-C 24141950 RNF38 51644 2322 chr9 36482563 36490650 36487822 N NA NA RNF38,MELK IMR90 Hi-C 24141950 RNF38 81368 2323 chr9 36764637 36767790 36766139 Y RNF38,RNF38 NA MELK IMR90 Hi-C 24141950 MELK 191778 2324 chr9 37064647 37066858 37066292 N NA PAX5,LOC100506710 ZCCHC7,PAX5 IMR90 Hi-C 24141950 LOC100506710 13035 2325 chr9 37394788 37413204 37403391,37407778,37399122,37410807 Y,N,N,N PAX5,ZCCHC7,ZBTB5;NA;NA;NA GRHPR PAX5,LOC100506710,ZCCHC7,ZBTB5,GRHPR,MIR4540 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GRHPR 9503 2326 chr9 37471787 37474202 37472248 N NA GRHPR,ZBTB5,POLR1E GRHPR,POLR1E,FBXO10 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZBTB5 6380 2327 chr9 38686682 38689409 38687606 N NA NA NA NA NA NA ALDH1B1 294021 2328 chr9 42250230 42253810 42251690 N NA NA NA NA NA NA MGC21881 295154 2329 chr9 44243683 44246798 44245459 N NA NA NA NA NA NA FAM27C 743438 2330 chr9 44867305 44868618 44868087,44867714 N,N NA;NA NA NA NA NA NA FAM27C 121618 2331 chr9 45351465 45359022 45352206,45356517 N,N NA;NA NA NA NA NA NA FAM27C 361229 2332 chr9 45431557 45444024 45438392,45441850 N,N NA;NA NA NA NA NA NA FAM27A 283005 2333 chr9 46210161 46216524 46211561 N NA NA NA NA NA NA FAM27A 483132 2334 chr9 46387607 46392972 46391130 N NA NA NA NA NA NA FAM27A 660578 2335 chr9 4934931 4940158 4937226,4939261 N,Y NA;JAK2 JAK2 RCL1,JAK2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JAK2 45087 2336 chr9 4969611 4972200 4971285 N NA JAK2 RCL1,JAK2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JAK2 13045 2337 chr9 5491152 5495630 5494120 N NA CD274,PDCD1LG2 NA NA NA NA PDCD1LG2 14915 2338 chr9 5593989 5609544 5608648 N NA KIAA1432 INSL6,JAK2,RCL1,CD274 IMR90 Hi-C 24141950 KIAA1432 19575 2339 chr9 6079240 6081284 6080403 N NA NA NA NA NA NA RANBP6 63600 2340 chr9 6183781 6187278 6185247 N NA NA GLDC IMR90 Hi-C 24141950 RANBP6 168141 2341 chr9 66454536 66461475 66456602 N NA NA LOC642236 IMR90 Hi-C 24141950 LOC642236 1992900 2342 chr9 66552339 66561751 66553951 N NA NA NA NA NA NA LOC642236 1892624 2343 chr9 66571261 66572522 66571531 N NA NA NA NA NA NA LOC642236 1881853 2344 chr9 66693112 66696831 66694903 N NA NA NA NA NA NA LOC642236 1757544 2345 chr9 6679827 6684979 6681311,6682957 Y,N UHRF2,KDM4C;NA GLDC KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 GLDC 34135 2346 chr9 66857396 66859696 66858372 N NA NA NA NA NA NA LOC642236 1594679 2347 chr9 6688827 6696395 6693169 N NA GLDC GLDC IMR90 Hi-C 24141950 GLDC 43135 2348 chr9 6701952 6705690 6704271 N NA NA KDM4C MCF7 ChIA-PET 22265404 KDM4C 51951 2349 chr9 6714688 6717876 6716293 N NA KDM4C KDM4C MCF7 ChIA-PET 22265404 KDM4C 39765 2350 chr9 67300528 67302363 67301450 N NA NA NA NA NA NA LOC642236 1152012 2351 chr9 68298814 68309784 68299641 Y NA NA NA NA NA NA LOC642236 144591 2352 chr9 68375904 68381600 68377752 N NA NA NA NA NA NA LOC642236 72775 2353 chr9 68512087 68514302 68513302 N NA NA NA NA NA NA LOC642236 57712 2354 chr9 69876512 69879626 69877913 N NA NA NA NA NA NA CBWD3 977213 2355 chr9 70645531 70657906 70646366 N NA NA NA NA NA NA CBWD3 198933 2356 chr9 71254177 71261531 71255150,71259240,71260827 N,N,N NA;NA;NA NA PIP5K1B IMR90 Hi-C 24141950 PIP5K1B 59085 2357 chr9 71262969 71271544 71268480,71264074,71266318 N,N,N NA;NA;NA PIP5K1B PIP5K1B IMR90 Hi-C 24141950 PIP5K1B 49072 2358 chr9 73032798 73037440 73034176 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 3225 2359 chr9 75057760 75061457 75058659 N NA NA TMC1,ZFAND5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFAND5 77597 2360 chr9 75079111 75080925 75080113 N NA NA TMC1 IMR90 Hi-C 24141950 ZFAND5 98948 2361 chr9 75123213 75125897 75124747 Y NA NA TMC1,ZFAND5 IMR90 Hi-C 24141950 ZFAND5 143050 2362 chr9 75746493 75748666 75747482 Y ANXA1 NA ANXA1 IMR90 Hi-C 24141950 ZFAND5 766330 2363 chr9 86737701 86739862 86738883 N NA NA NA NA NA NA RMI1 142064 2364 chr9 87670281 87672468 87671085 N NA NA NA NA NA NA AGTPBP1 684476 2365 chr9 90077962 90080806 90079092 N NA DAPK1 DAPK1 IMR90 Hi-C 24141950 DAPK1 31950 2366 chr9 92136463 92140270 92137353 Y SECISBP2 SEMA4D SEMA4D,SECISBP2 IMR90 Hi-C 24141950 SEMA4D 41852 2367 chr9 92156568 92158613 92157561 N NA NA SECISBP2,SEMA4D IMR90 Hi-C 24141950 GADD45G 61314 2368 chr9 92168420 92174210 92170806 N NA GADD45G SECISBP2,SEMA4D,GADD45G,SYK IMR90 Hi-C 24141950 GADD45G 45717 2369 chr9 92444397 92448030 92445148 N NA NA NA NA NA NA GADD45G 224470 2370 chr9 92515631 92517021 92515905 Y NA NA NA NA NA NA GADD45G 295704 2371 chr9 93922816 93927541 93925178,93927186 N,N NA;NA NA AUH,LOC100129316,NFIL3 IMR90 Hi-C 24141950 AUH 196665 2372 chr9 97417605 97419877 97418718 N NA NA FBP1,FANCC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C9orf3 69074 2373 chr9 99982931 99985083 99984206 N NA NA NA NA NA NA TDRD7 189219 2374 chrM 2434 16571 16468 N NA NA NA NA NA NA NA -1 2375 chrX 102658980 102661787 102659683 N NA WBP5 NGFRAP1 MCF7 ChIA-PET 22265404 WBP5 47600 2376 chrX 106926839 106930312 106928370 Y NA NA NA NA NA NA PRPS1 55185 2377 chrX 107272231 107275188 107273751 N NA NA MID2 IMR90 Hi-C 24141950 PSMD10 59686 2378 chrX 108512580 108515727 108514604 N NA NA NA NA NA NA KCNE1L 352666 2379 chrX 109015560 109019177 109017401 Y NA ACSL4 NA NA NA NA ACSL4 38939 2380 chrX 109025258 109028279 109026561 N NA ACSL4 ACSL4 IMR90 Hi-C 24141950 ACSL4 48637 2381 chrX 114959108 115006685 114982310 N NA NA NA NA NA NA WDR44 2473351 2382 chrX 115054996 115067430 115066829 N NA NA NA NA NA NA WDR44 2412606 2383 chrX 115082163 115086861 115085468 N NA NA NA NA NA NA WDR44 2393175 2384 chrX 115124814 115129159 115126487 N NA NA NA NA NA NA WDR44 2350877 2385 chrX 11750645 11753466 11751516 N NA MSL3 NA NA NA NA MSL3 22812 2386 chrX 11760823 11765797 11762363 N NA MSL3 ARHGAP6,MSL3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MSL3 10481 2387 chrX 119618960 119620499 119619894 N NA LAMP2 LAMP2 K562 ChIA-PET 22265404 LAMP2 15756 2388 chrX 119882433 119884544 119883212 N NA NA NA NA NA NA C1GALT1C1 118428 2389 chrX 120290022 120298802 120291819,120295509 N,N NA;NA NA NA NA NA NA GLUD2 108560 2390 chrX 122897581 122900826 122899087 Y NA THOC2 NA NA NA NA THOC2 30677 2391 chrX 125605645 125607801 125606487 Y NA NA NA NA NA NA STAG2 2511170 2392 chrX 129089336 129092994 129091477 N NA UTP14A,BCORL1 UTP14A K562 ChIA-PET 22265404 BCORL1 46170 2393 chrX 129094318 129096999 129095404 N NA BCORL1 UTP14A K562 ChIA-PET 22265404 BCORL1 42165 2394 chrX 129115554 129122224 129116458 N NA BCORL1 BCORL1,UTP14A,XPNPEP2,ZDHHC9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCORL1 16940 2395 chrX 12966208 12971198 12968495 Y TMSB4X,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 22028 2396 chrX 12978340 12981621 12980100 N NA TMSB4X NA NA NA NA TMSB4X 11605 2397 chrX 13091252 13112860 13093876,13100693,13107558 N,N,N NA;NA;NA NA LOC100133123,TMSB4X,FAM9C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMSB4X 98026 2398 chrX 13271200 13277661 13272591,13276253 N,N NA;NA NA TMSB4X IMR90 Hi-C 24141950 TMSB4X 277974 2399 chrX 13281177 13283559 13282503 N NA NA LOC100133123 IMR90 Hi-C 24141950 TMSB4X 287951 2400 chrX 13490248 13493571 13491979 N NA NA NA NA NA NA TCEANC 177736 2401 chrX 13503926 13507210 13505786 N NA NA TMSB4X,RAB9A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TCEANC 164097 2402 chrX 135698365 135700184 135699599 N NA NA ARHGEF6 IMR90 Hi-C 24141950 HTATSF1 119127 2403 chrX 135990840 136000388 135991905 N NA RBMX RBMX K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RBMX 27901 2404 chrX 142063464 142067840 142065586 N NA NA NA NA NA NA ATP11C 3149017 2405 chrX 148279133 148284361 148281025 N NA NA AFF2 IMR90 Hi-C 24141950 IDS 302523 2406 chrX 148956878 148961866 148959503 N NA NA NSMCE2 MCF7 ChIA-PET 19890323 HSFX2 101152 2407 chrX 152200009 152201777 152201083 N NA NA PNMA5 IMR90 Hi-C 24141950 NSDHL 200498 2408 chrX 152676083 152678379 152676878 N NA TREX2 NA NA NA NA TREX2 33566 2409 chrX 15920370 15923214 15921572 N NA AP1S2 CTPS2 IMR90 Hi-C 24141950 AP1S2 47270 2410 chrX 19211640 19214803 19213262 N NA NA NA NA NA NA PDHA1 147208 2411 chrX 23782393 23787281 23785305,23784941 N,N NA;NA ACOT9,SAT1 NA NA NA NA SAT1 13994 2412 chrX 24260061 24262910 24261166 N NA NA ZFX,EIF2S3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFX 92299 2413 chrX 2437638 2441867 2439654 Y NA DHRSX NA NA NA NA DHRSX 18623 2414 chrX 26928437 26942030 26929500 N NA NA NA NA NA NA POLA1 2216373 2415 chrX 30615041 30616474 30615837 Y GK,CXorf21 CXorf21 NA NA NA NA CXorf21 19008 2416 chrX 30618402 30619576 30618768 N NA CXorf21 NA NA NA NA CXorf21 22369 2417 chrX 37612848 37615411 37614165 N NA CYBB NA NA NA NA CYBB 23859 2418 chrX 38737877 38741032 38739680 N NA NA NA NA NA NA MID1IP1 77192 2419 chrX 38792722 38796172 38795044 N NA NA NA NA NA NA MID1IP1 132037 2420 chrX 39055328 39057105 39055994 N NA NA NA NA NA NA MID1IP1 394643 2421 chrX 39472193 39474940 39473421 N NA NA NA NA NA NA BCOR 561642 2422 chrX 39645704 39647274 39646179 N NA NA NA NA NA NA BCOR 389308 2423 chrX 39706583 39721030 39714646,39719516 Y,N BCOR;NA NA BCOR IMR90 Hi-C 24141950 BCOR 315552 2424 chrX 39795143 39797588 39796544 N NA NA BCOR IMR90 Hi-C 24141950 BCOR 238994 2425 chrX 39870783 39874846 39872807 Y NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 161736 2426 chrX 40124984 40127989 40126771 N NA NA BCOR K562 ChIA-PET 22265404 BCOR 88402 2427 chrX 40397532 40400634 40399043 N NA ATP6AP2 NA NA NA NA ATP6AP2 39582 2428 chrX 40427892 40433005 40430244 N NA ATP6AP2 ATP6AP2 IMR90 Hi-C 24141950 ATP6AP2 7211 2429 chrX 40868773 40870095 40869602 Y USP9X,ATP6AP2,CXorf38,MED14 NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 74793 2430 chrX 41173450 41176854 41174818 N NA DDX3X DDX3X,NYX IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DDX3X 15797 2431 chrX 41180341 41182110 41181112 N NA DDX3X DDX3X IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDX3X 10541 2432 chrX 42804529 42806837 42805784 N NA NA NA NA NA NA CASK 1022242 2433 chrX 42861450 42864538 42863223 N NA NA NA NA NA NA CASK 1079163 2434 chrX 45620238 45631740 45622638,45629785,45631143 N,N,Y NA;NA;NA NA MIR222,MIR221 IMR90 Hi-C 24141950 ZNF673 674884 2435 chrX 45665123 45667212 45666200 Y NA NA NA NA NA NA ZNF673 639412 2436 chrX 4626638 4630227 4628863 Y NA NA NA NA NA NA LOC389906 864703 2437 chrX 47220460 47222710 47221376 N NA NA USP11,ZNF157,UBA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF41 119635 2438 chrX 47371785 47373037 47372623 N NA ZNF41,ARAF CDK16,USP11,UBA1,ARAF,SYN1 IMR90 Hi-C 24141950 ZNF41 29440 2439 chrX 48593933 48597325 48595713 N NA SUV39H1 SUV39H1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUV39H1 38802 2440 chrX 49968321 49971764 49969268 N NA NA NA NA NA NA LOC158572 324362 2441 chrX 52003234 52006496 52005010 Y NA NA NA NA NA NA MAGED1 457079 2442 chrX 53171944 53175800 53172313 N NA NA NA NA NA NA TSPYL2 60402 2443 chrX 53726618 53746752 53742748 N NA HUWE1 HUWE1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HUWE1 12945 2444 chrX 53758814 53767735 53760575 N NA HUWE1 HUWE1 IMR90 Hi-C 24141950 HUWE1 45141 2445 chrX 54664655 54667948 54665883 Y NA NA ITIH6,MAGED2 MCF7 ChIA-PET 22265404 GNL3L 108011 2446 chrX 55932475 55937497 55935121 N NA NA NA NA NA NA RRAGB 188365 2447 chrX 62395017 62398383 62396866 N NA NA NA NA NA NA SPIN4 172835 2448 chrX 62517505 62519628 62518544 N NA NA NA NA NA NA SPIN4 51590 2449 chrX 64875760 64877475 64876943 N NA MSN MSN IMR90 Hi-C 24141950 MSN 10036 2450 chrX 65041175 65042888 65041949 N NA NA NA NA NA NA MSN 153664 2451 chrX 65144654 65148410 65146325 N NA NA VSIG4 K562 ChIA-PET 22265404 MSN 257143 2452 chrX 65264954 65268157 65266323 N NA NA VSIG4 K562 ChIA-PET 22265404 MSN 377443 2453 chrX 65293443 65296549 65294929 Y MSN NA NA NA NA NA MSN 405932 2454 chrX 6655905 6658522 6657235 N NA NA NA NA NA NA HDHD1 407709 2455 chrX 67790693 67792837 67791709 N NA NA NA NA NA NA YIPF6 72069 2456 chrX 75363910 75369446 75365244,75368557 N,N NA;NA CXorf26 NA NA NA NA CXorf26 23325 2457 chrX 78177203 78181187 78179166 N NA P2RY10 NA NA NA NA P2RY10 19642 2458 chrX 78195844 78197704 78197114 N NA P2RY10 NA NA NA NA P2RY10 3125 2459 chrX 78393349 78396088 78394543 Y P2RY10,GPR174 GPR174 NA NA NA NA GPR174 30381 2460 chrX 78398921 78415022 78400085,78402822 N,N NA;NA GPR174 NA NA NA NA GPR174 11447 2461 chrX 89317436 89317707 89317571 N NA NA NA NA NA NA CHM 4014870 2462 chrX 9978413 9981290 9979452 N NA WWC3 SHROOM2,WWC3 IMR90 Hi-C 24141950 WWC3 2505 2463 chrY 10012381 10015363 10013484 N NA NA NA NA NA NA CD99 7453153 2464 chrY 10029044 10029936 10029919 N NA NA NA NA NA NA CD99 7469816 2465 chrY 13336195 13341922 13338311 N NA NA NA NA NA NA CD99 10776967 2466 chrY 13345878 13349166 13347548 N NA NA NA NA NA NA CD99 10786650 2467 chrY 2387515 2391313 2389627 N NA DHRSX NA NA NA NA DHRSX 18500 2468 chrY 8979384 8979692 8979537 N NA NA NA NA NA NA CD99 6420156 2469 chrY 9926175 9926925 9926523 N NA NA NA NA NA NA CD99 7366947 2470 chrY 9928549 9933676 9929091 N NA NA NA NA NA NA CD99 7369321