Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 100055289 100058026 100056580 N NA NA NA NA NA NA PALMD 53405 2 chr1 100103577 100106359 100104556 Y NA PALMD NA NA NA NA PALMD 5072 3 chr1 101062153 101063574 101062970 N NA NA NA NA NA NA VCAM1 121622 4 chr1 116876994 116878914 116877744 N NA ATP1A1 SLC22A15,ATP1A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP1A1 36881 5 chr1 118319105 118321614 118320478 N NA NA NA NA NA NA GDAP2 150688 6 chr1 11989848 11992234 11991266 N NA KIAA2013,PLOD1,MFN2 NA NA NA NA PLOD1 2490 7 chr1 120684311 120688705 120687311 N NA NA NA NA NA NA NOTCH2 71994 8 chr1 145394807 145398075 145397953,145395661 N,N NA;NA TXNIP PDE4DIP,SEC22B,HFE2,GNRHR2,LIX1L,RBM8A,PIAS3,POLR3C,NUDT17,ANKRD35,TXNIP,ANKRD34A,POLR3GL,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TXNIP 40387 9 chr1 145398693 145400013 145399074 N NA TXNIP LIX1L,HFE2,ANKRD35,TXNIP,ANKRD34A,RBM8A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TXNIP 38449 10 chr1 147265682 147267968 147266823 N NA NA NA NA NA NA ACP6 123048 11 chr1 148240160 148243114 148241281 N NA NA NA NA NA NA NBPF14 214312 12 chr1 148246843 148248675 148248234 N NA NA NA NA NA NA NBPF14 220995 13 chr1 149222508 149225802 149224371 N NA NA NBPF10,SEC22B,NBPF15 MCF7 ChIA-PET 22265404 LOC388692 53674 14 chr1 149512960 149515280 149514419 N NA NA NA NA NA NA FAM91A2 60982 15 chr1 152019507 152021861 152020698 N NA S100A11 THEM4 MCF7 ChIA-PET 22265404 S100A11 9996 16 chr1 152161264 152163378 152162377 N NA NA NA NA NA NA S100A11 151753 17 chr1 156473128 156474567 156473278 Y LMNA,C1orf182,RRNAD1 MEF2D NA NA NA NA MEF2D 2599 18 chr1 161368040 161371265 161369297 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 83874 19 chr1 162842393 162845394 162843986 N NA NA C1orf110,RGS4,RGS5 IMR90 Hi-C 24141950 RGS4 193002 20 chr1 16838996 16842267 16840959 N NA CROCCP3 NECAP2,SPATA21,CROCCP3,NBPF1,CROCC,CROCCP2,MST1P2,MIR3675,ESPNP,ARHGEF19,C1orf144,FBXO42 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCCP3 19800 21 chr1 17215309 17217351 17216048 N NA CROCC NBPF1,MIR3675,CROCC,ESPNP IMR90 Hi-C 24141950 CROCC 31094 22 chr1 17220982 17223986 17222283 N NA CROCC CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CROCC 24459 23 chr1 17229733 17232645 17231511 Y PADI4,PADI2 CROCC CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCC 15800 24 chr1 172877298 172880570 172878922 Y TNFSF18 NA TNFSF4,LOC100506023,TNFSF18,SNORD81,GAS5,SNORD75,SNORD47,SNORD79,LOC100506046,SNORD77,DARS2,SNORD78,SNORD80,ZBTB37,SNORD44,SNORD76 IMR90 Hi-C 24141950 TNFSF18 139533 25 chr1 173981622 173992623 173991569 N NA RC3H1 ZBTB37,RC3H1,GAS5 IMR90 Hi-C 24141950 RC3H1 19412 26 chr1 176211127 176214500 176213078 N NA RFWD2 TNR,RFWD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RFWD2 34757 27 chr1 181103422 181105421 181104792 Y STX6,MR1,IER5 IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 45784 28 chr1 185341658 185347517 185343995 N NA NA IVNS1ABP,LOC100288079 IMR90 Hi-C 24141950 IVNS1ABP 55197 29 chr1 187996103 187998685 187996936 Y NA NA NA NA NA NA PTGS2 1346544 30 chr1 204475264 204476947 204475946 N NA PIK3C2B,MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 8560 31 chr1 208114796 208116430 208115560 N NA CD34 CD34 IMR90 Hi-C 24141950 CD34 30113 32 chr1 208134900 208140319 208136611 N NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CD34 50217 33 chr1 224179450 224190754 224180399 Y NA NA NA NA NA NA FBXO28 111037 34 chr1 226189161 226191050 226190364 N NA C1orf55 NA NA NA NA C1orf55 2095 35 chr1 226296575 226299458 226298139 N NA H3F3A ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 46167 36 chr1 235114850 235117813 235116636 N NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 174443 37 chr1 235121817 235124573 235122914 Y NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 167683 38 chr1 235131951 235135249 235133512 N NA NA LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 157007 39 chr1 245125823 245129090 245127612 N NA EFCAB2 EFCAB2,HNRNPU,HNRNPU-AS1,COX20 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 4194 40 chr1 25591324 25595009 25594229 N NA SYF2,C1orf63 NA NA NA NA C1orf63 17339 41 chr1 26826302 26829759 26827516 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 27400 42 chr1 26945916 26948907 26947267 N NA NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73615 43 chr1 32408863 32411305 32410149 N NA PTP4A2 KHDRBS1,SPOCD1 IMR90 Hi-C 24141950 PTP4A2 4875 44 chr1 41836682 41851240 41848219 N NA NA EDN2 IMR90 Hi-C 24141950 SCMH1 128867 45 chr1 45731536 45733417 45732189 N NA LOC400752 ZSWIM5,UROD,HECTD3,BTBD19,PLK3,TCTEX1D4 IMR90 Hi-C 24141950 LOC400752 36165 46 chr1 564343 570425 567514 N NA NA NA NA NA NA LINC00115 192477 47 chr1 61425535 61430492 61426980,61428841,61428961 N,N,N NA;NA;NA NA INADL,NFIA IMR90 Hi-C 24141950 NFIA 112454 48 chr1 61514592 61518939 61516374 Y NA NFIA INADL,NFIA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFIA 24007 49 chr1 62070818 62074096 62072641 N NA NA INADL IMR90 Hi-C 24141950 TM2D1 116999 50 chr1 65466309 65469540 65468549 N NA JAK1 JAK1 IMR90 Hi-C 24141950 JAK1 34122 51 chr1 65531176 65535141 65533403 N NA NA AK4,DNAJC6,LEPR,JAK1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 JAK1 98989 52 chr1 66903274 66905484 66904465 N NA NA PDE4B IMR90 Hi-C 24141950 SGIP1 94341 53 chr1 8013836 8015250 8014317 N NA PARK7 NA NA NA NA PARK7 6464 54 chr1 8179918 8183893 8181303,8182821 N,N NA;NA NA ERRFI1,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 93525 55 chr1 85068849 85070476 85069766 N NA CTBS PRKACB,CTBS,MCOLN2,RPF1,GNG5,C1orf180,UOX,LPAR3,SSX2IP IMR90 Hi-C 24141950 CTBS 28686 56 chr1 9227286 9258715 9242301 N NA H6PD SLC2A7,SLC25A33,MIR34A,GPR157,H6PD,SPSB1,TMEM201,PIK3CD IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 H6PD 36148 57 chr1 94787564 94790829 94789372 N NA NA ARHGAP29,ABCA4,BCAR3,GCLM IMR90 Hi-C 24141950 ARHGAP29 84257 58 chr1 98787838 98790304 98789311 N NA NA MIR137HG,MIR2682,LOC729987,DPYD IMR90 Hi-C 24141950 LOC729987 111571 59 chr10 106098447 106101747 106099737 N NA ITPRIP ITPRIP,GSTO1,GSTO2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ITPRIP 4784 60 chr10 110314927 110318741 110316205 N NA NA NA NA NA NA XPNPEP1 1364570 61 chr10 126603438 126620913 126605666 N NA ZRANB1 ZRANB1,CTBP2,METTL10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZRANB1 9779 62 chr10 17255663 17259352 17257823 N NA TRDMT1,VIM CUBN,TRDMT1,VIM IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 VIM 10906 63 chr10 17553953 17555875 17554658 N NA NA CUBN,ST8SIA6,PTPLA IMR90 Hi-C 24141950 PTPLA 103498 64 chr10 22517175 22519793 22518487 N NA LOC100130992 COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 21208 65 chr10 30380525 30381115 30380823 N NA KIAA1462 KIAA1462,MTPAP IMR90 Hi-C 24141950 KIAA1462 32037 66 chr10 3087103 3089084 3088177 Y NA PFKP PFKP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFKP 20628 67 chr10 31072346 31075764 31073570 Y NA NA ARHGAP12,ZEB1-AS1,ZEB1,ZNF438 IMR90 Hi-C 24141950 ZNF438 245102 68 chr10 31984843 31988321 31986960 Y NA NA ARHGAP12,ZEB1,ZNF438 IMR90 Hi-C 24141950 ARHGAP12 229449 69 chr10 31995004 31998538 31996795 N NA NA ZEB1,ARHGAP12 IMR90 Hi-C 24141950 ARHGAP12 219232 70 chr10 32044405 32050518 32049154 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 167252 71 chr10 32654350 32669122 32654746,32667558 N,N NA;NA EPC1 EPC1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EPC1 18237 72 chr10 32733387 32737096 32735458 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 97274 73 chr10 33250052 33253240 33251046 Y NA ITGB1 NA NA NA NA ITGB1 2759 74 chr10 33268422 33273378 33271065 N NA ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 21129 75 chr10 36460424 36464018 36461349 N NA NA NA NA NA NA FZD8 530062 76 chr10 3846566 3849918 3848026 N NA KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 19093 77 chr10 3851847 3852828 3852678 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 24374 78 chr10 3870601 3872071 3871338 N NA KLF6 LOC338588,LOC100216001,KLF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 43128 79 chr10 4283438 4286463 4285093 N NA NA KLF6,LOC100216001,LOC338588 IMR90 Hi-C 24141950 LOC100216001 433799 80 chr10 43915393 43918392 43916221 N NA HNRNPF,ZNF487P ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 10697 81 chr10 4745644 4747409 4746394 N NA LOC100216001 LOC100216001 IMR90 Hi-C 24141950 LOC100216001 25382 82 chr10 4812008 4814912 4813759 Y NA NA KLF6,PITRM1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100216001 91746 83 chr10 5332936 5335326 5333922 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 119192 84 chr10 62586945 62589673 62588160 N NA CDK1 RHOBTB1,ARID5B IMR90 Hi-C 24141950 CDK1 48733 85 chr10 73647568 73650336 73648699 N NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 36486 86 chr10 92688426 92692068 92690627 N NA ANKRD1 ANKRD1,PCGF5 IMR90 Hi-C 24141950 ANKRD1 7394 87 chr10 92922109 92928674 92923046 N NA NA ANKRD1,PCGF5,RPP30,NUDT9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PCGF5 51234 88 chr10 94515373 94518097 94516620 N NA NA EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 65692 89 chr10 94519526 94521222 94520503 Y NA NA EXOC6,HHEX,KIF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 69845 90 chr10 973739 979641 977792 N NA LARP4B DIP2C,LARP4B,GTPBP4,IDI1,IDI2-AS1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LARP4B 42037 91 chr11 103398399 103402162 103400516 N NA NA DYNC2H1 IMR90 Hi-C 24141950 DCUN1D5 435455 92 chr11 106341831 106343561 106342290 N NA NA NA NA NA NA AASDHPPT 393539 93 chr11 108903573 108906419 108904938 N NA NA DDX10 IMR90 Hi-C 24141950 DDX10 367757 94 chr11 10951740 10954462 10952884 N NA NA EIF4G2,MICALCL,LOC729013,ZBED5,CTR9,GALNTL4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC729013 71976 95 chr11 114162257 114164143 114163252 Y NA NNMT NA NA NA NA NNMT 2392 96 chr11 117005198 117008387 117005731 N NA SIK3,PAFAH1B2,SIDT2 SIK3,ZNF259,BUD13,APOA5,APOA1,APOA4,APOC3,PAFAH1B2 IMR90 Hi-C 24141950 PAFAH1B2 6613 97 chr11 118147269 118149508 118148251 Y MPZL2 MPZL3,MPZL2 MPZL2,LOC100526771,TMPRSS4,SCN4B,SCN2B,MPZL3,CD3E,AMICA1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 MPZL2 12018 98 chr11 12110171 12113347 12112126 N NA MICAL2 MICAL2,TEAD1,MICALCL,DKK3,USP47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MICAL2 18791 99 chr11 123299702 123303279 123301504 N NA NA CLMP IMR90 Hi-C 24141950 GRAMD1B 93249 100 chr11 124587241 124588926 124588007 N NA SIAE,NRGN,VSIG2,ESAM NA NA NA NA NRGN 20903 101 chr11 128049242 128052048 128050612 N NA NA ETS1,FLI1,KCNJ1,TP53AIP1,LOC100507392,KCNJ5,C11orf45,ARHGAP32 IMR90 Hi-C 24141950 FLI1 511763 102 chr11 128076717 128079594 128078272 N NA NA FLI1,ETS1,KCNJ1 IMR90 Hi-C 24141950 FLI1 484217 103 chr11 13236598 13238868 13237874 N NA NA ARNTL,BTBD10,LOC100506305 IMR90 Hi-C 24141950 ARNTL 60457 104 chr11 17226452 17233707 17230171 N NA PIK3C2A NA NA NA NA PIK3C2A 35098 105 chr11 28778020 28810215 28798159,28778883 N,Y NA;NA NA BDNF,BDNF-AS1,KIF18A IMR90 Hi-C 24141950 METTL15 648222 106 chr11 29139921 29144557 29141564 N NA NA BDNF,BDNF-AS1 IMR90 Hi-C 24141950 METTL15 1010123 107 chr11 43665009 43675240 43665784 N NA HSD17B12 HSD17B12 IMR90 Hi-C 24141950 HSD17B12 26903 108 chr11 46258807 46266692 46264980,46259480 Y,N NA;NA NA PHF21A,DGKZ,CREB3L1,MDK IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF21A 115822 109 chr11 47415518 47417590 47416472 N NA SLC39A13,PSMC3 SPI1,SLC39A13 K562 ChIA-PET 22265404 SLC39A13 12456 110 chr11 65243343 65247914 65245078,65246952 Y,N BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8;NA MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 17319 111 chr11 69257630 69259802 69258625 N NA NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CCND1 196071 112 chr11 72887241 72889404 72888835 N NA FCHSD2 FCHSD2,ATG16L2,P2RY6,ARHGEF17,STARD10,MIR4692,P2RY2,ARAP1 IMR90 Hi-C 24141950 FCHSD2 34098 113 chr11 73489452 73491695 73490377 N NA RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 7222 114 chr11 75264327 75267263 75265574 Y SERPINH1 SERPINH1 RPS3,GDPD5,KLHL35 IMR90 Hi-C 24141950 SERPINH1 5838 115 chr11 75268898 75270645 75269830 N NA SERPINH1 NA NA NA NA SERPINH1 2456 116 chr11 75945763 75947688 75946759 N NA NA C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 144192 117 chr11 86450669 86454334 86452413 N NA NA PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 57157 118 chr11 8691299 8693816 8693182 N NA TRIM66,RPL27A TRIM66,STK33 IMR90 Hi-C 24141950 RPL27A 10179 119 chr11 89339259 89341585 89340243 N NA NA NA NA NA NA CHORDC1 614947 120 chr11 9385098 9386828 9386014 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 19341 121 chr11 9634085 9637191 9635256 N NA WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 38857 122 chr12 105862459 105882715 105864157 N NA NA NUAK1,TCP11L2,CKAP4 IMR90 Hi-C 24141950 C12orf75 138045 123 chr12 123846815 123851744 123850137,123846982 N,N NA;NA SBNO1,SETD8 SBNO1,RILPL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SBNO1 11827 124 chr12 14412608 14414239 14413455 N NA NA ATF7IP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATF7IP 104372 125 chr12 25536943 25540658 25538819 Y NA NA BCAT1,CASC1,KRAS,LYRM5,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 133089 126 chr12 28342539 28345232 28343785 N NA NA KLHDC5,CCDC91 IMR90 Hi-C 24141950 KLHDC5 409352 127 chr12 29299230 29324231 29302302 N NA NA FAR2 IMR90 Hi-C 24141950 FAR2 52367 128 chr12 30200680 30201998 30200995 N NA NA NA NA NA NA IPO8 646931 129 chr12 32606496 32614494 32607998 Y NA FGD4 FGD4,DNM1L,BICD1 IMR90 Hi-C 24141950 FGD4 40547 130 chr12 46865712 46868863 46867537 Y NA NA SLC38A2,SLC38A4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 99067 131 chr12 46884253 46888157 46886530,46885964 Y,N NA;NA NA SLC38A2,SLC38A4,SLC38A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 117608 132 chr12 46916342 46919886 46917700 N NA NA SLC38A2,SLC38A4,SLC38A1,AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 149697 133 chr12 47053017 47056367 47054509 N NA NA SLC38A2,SLC38A1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 286372 134 chr12 49275560 49277907 49276938 N NA DDX23,RND1,FKBP11 RND1,CACNB3,DDX23,ARF3,WNT10B,FKBP11,DDN,WNT1,PRKAG1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RND1 15907 135 chr12 49627662 49629712 49628470 Y LMBR1L,TUBA1A TUBA1A,TUBA1C DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2,LMBR1L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 29153 136 chr12 53737944 53740200 53739251 N NA PFDN5,C12orf10,AAAS,SP1 MAP3K12,TARBP2,PCBP2,PFDN5,ESPL1,SP1,RARG,C12orf10,SP7,AAAS,AMHR2,PRR13,LOC100652999,ATF7,NPFF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AAAS 22532 137 chr12 53764193 53766661 53765154 Y CSAD,ITGB7,PFDN5,SP1,SP1,PRR13 AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 7318 138 chr12 54819962 54827999 54821975,54826728 N,N NA;NA ZNF385A,ITGA5 ZNF385A,ITGA5,CBX5,HNRNPA1,NFE2,GTSF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ITGA5 6912 139 chr12 58258130 58260576 58259185 Y TSPAN31,CDK4,METTL21B,CTDSP2 AVIL,CTDSP2 CTDSP2 MCF7 ChIA-PET 22265404 CTDSP2 17383 140 chr12 58288728 58291595 58290514 N NA CTDSP2,LOC100506844 CTDSP2,METTL1,CYP27B1,METTL21B,AVIL,TSFM,TSPAN31,CDK4,MARCH9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506844 38352 141 chr12 59989496 59992094 59990338 N NA NA NA NA NA NA LRIG3 675234 142 chr12 6248768 6251523 6250356 Y VAMP1,TNFRSF1A,TAPBPL,IFFO1,CHD4 VWF VWF,CD9 IMR90 Hi-C 24141950 VWF 14932 143 chr12 6276034 6278802 6276762 N NA VWF,CD9 VWF,CD9,PLEKHG6 IMR90 Hi-C 24141950 CD9 30680 144 chr12 6290315 6299989 6291603 Y VWF,CD9 CD9 VWF,PLEKHG6,CD9 IMR90 Hi-C 24141950 CD9 9493 145 chr12 65995363 66016507 65997062,66006499 N,N NA;NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 201733 146 chr12 66026930 66032993 66028809,66031740 Y,N NA;NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 185247 147 chr12 66041285 66044752 66043060 Y NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 173488 148 chr12 66046588 66052585 66049144 Y NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 165655 149 chr12 66088337 66092471 66089528 Y IRAK3 NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 125769 150 chr12 68758122 68759861 68759095 Y IFNG,RAP1B NA RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAP1B 244758 151 chr12 76371239 76374331 76372528 N NA NA OSBPL8,PHLDA1,KRR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 51225 152 chr12 76652562 76656588 76653923 N NA NA NAP1L1 IMR90 Hi-C 24141950 BBS10 85634 153 chr12 77513256 77515595 77514609 N NA NA E2F7 IMR90 Hi-C 24141950 E2F7 53896 154 chr12 8122271 8125362 8123463 Y CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC2A3 33379 155 chr12 8177933 8180877 8179296 Y NA FOXJ2 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 4482 156 chr12 96818515 96823198 96821290,96823029 N,N NA;NA CDK17 CDK17,ELK3,LTA4H IMR90 Hi-C 24141950 CDK17 24149 157 chr12 96829234 96834519 96830354,96832401 Y,N CDK17;NA CDK17 LTA4H,ELK3,CDK17 IMR90 Hi-C 24141950 CDK17 34868 158 chr12 96838118 96917527 96839631,96895388,96842375,96883224 Y,N,Y,N NEDD1,NEDD1,CDK17;NA;NA;NA CDK17 CDK17,ELK3,LTA4H,AMDHD1,CCDC38,HAL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDK17 43752 159 chr13 21648622 21650631 21649661 N NA LATS2 LATS2,SAP18 IMR90 Hi-C 24141950 LATS2 12900 160 chr13 21653315 21655091 21654046 Y LATS2 LATS2 LATS2,SAP18 IMR90 Hi-C 24141950 LATS2 17593 161 chr13 30968891 30970365 30969393 N NA NA LINC00426,KATNAL1,USPL1,HMGB1,UBL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HMGB1 69716 162 chr13 34728795 34732370 34730691 Y NA NA NA NA NA NA STARD13 477863 163 chr13 34735275 34737439 34736429 Y NA NA NA NA NA NA STARD13 484343 164 chr13 44714333 44717391 44716301 N NA NA TSC22D1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC122 260507 165 chr13 51102490 51105484 51103720 Y NA NA DLEU1,DLEU2,EBPL,TRIM13,MIR3613,CTAGE10P,ST13P4,DLEU7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ST13P4 356336 166 chr13 65297266 65298117 65297943 N NA NA NA NA NA NA TDRD3 4326675 167 chr13 73742199 73742540 73742356 N NA NA NA NA NA NA KLF5 109057 168 chr13 80509388 80512818 80511760 N NA NA SPRY2 IMR90 Hi-C 24141950 SPRY2 402268 169 chr14 100658673 100660286 100659402 Y NA YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 YY1 44816 170 chr14 102782908 102784078 102783482 N NA ZNF839,CINP,TECPR2 MOK,DYNC1H1,HSP90AA1,WDR20,ZNF839 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF839 2018 171 chr14 26597817 26599693 26598581 N NA NA NA NA NA NA NOVA1 467267 172 chr14 26673293 26674862 26674330 N NA NA NA NA NA NA NOVA1 392098 173 chr14 29703591 29707551 29705742 N NA NA NA NA NA NA G2E3 1320778 174 chr14 29708060 29711244 29709545 N NA NA NA NA NA NA G2E3 1317085 175 chr14 38759091 38761928 38760710 N NA CLEC14A CLEC14A IMR90 Hi-C 24141950 CLEC14A 33516 176 chr14 50328189 50331223 50329601,50328916 Y,Y NA;NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 8650 177 chr14 50334022 50335703 50334953 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 METTL21D,SOS2,ARF6,C14orf182,NEMF,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 14483 178 chr14 50527235 50528872 50527622 Y RPL36AL,ARF6,C14orf182 C14orf183 NA NA NA NA C14orf183 30489 179 chr14 51326144 51327357 51326902 N NA NIN ATL1,NIN,PYGL,ABHD12B IMR90 Hi-C 24141950 NIN 28305 180 chr14 65695810 65697858 65696843 N NA NA LOC645431,FUT8,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 126583 181 chr14 69160815 69163406 69162144 Y NA NA ZFP36L1,RAD51B IMR90 Hi-C 24141950 ZFP36L1 99554 182 chr14 69279804 69282931 69281528 Y DCAF5 ZFP36L1 RAD51B,ZFP36L1,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 16844 183 chr14 75446037 75450051 75448071 N NA PGF,EIF2B2 NEK9,MLH3,ZC2HC1C,PROX2,DLST,RPS6KL1,PGF,EIF2B2,ACYP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EIF2B2 19561 184 chr14 75724378 75726952 75725809 N NA FOS,LOC731223 TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2,BATF,PGF IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOS 18529 185 chr14 77383810 77386580 77385572 N NA NA IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANGEL1 104527 186 chr14 77424287 77434557 77425790,77428359 N,Y NA;NA NA IRF2BPL MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BPL 60477 187 chr14 77497402 77502426 77500265 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 2368 188 chr14 85981867 85984542 85983289 N NA FLRT2 NA NA NA NA FLRT2 11946 189 chr14 90847549 90851271 90849266,90850930 N,N NA;NA C14orf102,CALM1 C14orf102,CALM1,TTC7B,EFCAB11,TDP1,PSMC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CALM1 12056 190 chr14 91574653 91576793 91575550 Y SMEK1,GPR68,CCDC88C,RPS6KA5,C14orf159 RPS6KA5,C14orf159 C14orf102,RPS6KA5,C14orf159,CCDC88C IMR90 Hi-C 24141950 C14orf159 3564 191 chr14 99439017 99439928 99439527 Y NA NA NA NA NA NA SETD3 507298 192 chr15 100005538 100009478 100007144 N NA NA MEF2A IMR90 Hi-C 24141950 MEF2A 96655 193 chr15 102285584 102287210 102285984 N NA TARSL2 NA NA NA NA TARSL2 20939 194 chr15 23126541 23128718 23127830 N NA NIPA1 NA NA NA NA NIPA1 39698 195 chr15 25017612 25019061 25018374 Y SNURF,SNRPN,SNRPN,SNRPN NA NA NA NA NA PAR-SN 208080 196 chr15 28833880 28866260 28834522 N NA HERC2P9 NA NA NA NA HERC2P9 33328 197 chr15 30762050 30796206 30763607 N NA NA NA NA NA NA ULK4P2 68552 198 chr15 31726324 31728695 31727591 N NA NA KLF13 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 107241 199 chr15 35596477 35599946 35598862 N NA NA ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466 IMR90 Hi-C 24141950 ZNF770 315980 200 chr15 38364650 38366379 38365420 N NA NA SPRED1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SPRED1 178673 201 chr15 39430721 39434212 39432475 Y C15orf54 NA THBS1,C15orf53,FSIP1,RASGRP1 IMR90 Hi-C 24141950 C15orf54 108673 202 chr15 39521662 39524320 39522857 Y NA C15orf54 C15orf54 IMR90 Hi-C 24141950 C15orf54 18565 203 chr15 39720524 39724544 39722440 Y THBS1,C15orf54 NA C15orf53,FSIP1,THBS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THBS1 148736 204 chr15 41912801 41914918 41913829 N NA MGA TYRO3,MAPKBP1,MGA IMR90 Hi-C 24141950 MGA 37692 205 chr15 42782516 42784870 42783357 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 2634 206 chr15 62429299 62431541 62430520 Y NA C2CD4B NA NA NA NA C2CD4B 25941 207 chr15 62678921 62683893 62682705 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 C2CD4B 221439 208 chr15 63187054 63190310 63188446 N NA NA TLN2,RAB8B,TPM1,APH1B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPM1 144528 209 chr15 63219609 63222095 63221175 N NA NA TPM1,TLN2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPM1 112743 210 chr15 63388644 63390798 63389708 N NA LACTB LACTB,RAB8B IMR90 Hi-C 24141950 LACTB 23201 211 chr15 65595826 65598363 65596871 Y DENND4A NA PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLPX 118263 212 chr15 66908665 66912946 66910103 Y SMAD3,MAP2K1 NA SMAD6 IMR90 Hi-C 24141950 SMAD6 81728 213 chr15 66936157 66941642 66937166,66939290,66939875 N,N,N NA;NA;NA NA SMAD6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD6 53032 214 chr15 66953154 66956181 66954065 N NA SMAD6 SMAD6 IMR90 Hi-C 24141950 SMAD6 38493 215 chr15 67133475 67136619 67135084 N NA NA SMAD6,SNAPC5 IMR90 Hi-C 24141950 SMAD6 138801 216 chr15 72928179 72931328 72929355 N NA BBS4 CELF6 IMR90 Hi-C 24141950 BBS4 47192 217 chr15 74391613 74393812 74392609 N NA NA NA NA NA NA PML 104599 218 chr15 78235983 78238058 78236992 N NA NA TBC1D2B,DNAJA4,IDH3A,CIB2,IREB2,LOC91450,SH2D7,WDR61,LOC645752,ACSBG1 IMR90 Hi-C 24141950 TBC1D2B 131936 219 chr15 79151569 79154093 79152756 Y IREB2 ADAMTS7,MORF4L1 MORF4L1,ADAMTS7 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 MORF4L1 11079 220 chr15 80036712 80037190 80037055 N NA NA NA NA NA NA C15orf37 177923 221 chr15 93362688 93365097 93363712 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 NA ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 LOC100507217 60976 222 chr15 99964073 99967184 99965947 N NA NA LRRC28,MEF2A,LYSMD4 IMR90 Hi-C 24141950 MEF2A 138949 223 chr15 99993695 99997152 99995833 N NA NA MEF2A,LRRC28 IMR90 Hi-C 24141950 MEF2A 108981 224 chr16 22203028 22205435 22203776 Y POLR3E EEF2K UQCRC2,POLR3E,EEF2K,PDZD9,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 12157 225 chr16 22206834 22207828 22207144 Y NA EEF2K POLR3E,EEF2K,UQCRC2,PDZD9,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 9764 226 chr16 25116796 25119596 25118486 N NA LCMT1 ARHGAP17,LCMT1,ZKSCAN2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LCMT1 3451 227 chr16 2917333 2919394 2918281 N NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 13802 228 chr16 29271643 29274633 29273166 N NA NA RRN3P2 IMR90 Hi-C 24141950 RRN3P2 185480 229 chr16 30644786 30650320 30645770 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF785,ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRR14 11921 230 chr16 30816165 30818994 30817298 N NA RNF40,ZNF629 C16orf93,PHKG2,RNF40,ZNF629,MIR762,BCL7C,CTF1,MIR4519,FBXL19-AS1,FBXL19,SRCAP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF629 17642 231 chr16 57333221 57334405 57333852 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,POLR2C,DOK4,CCDC102A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,GPR114 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 54183 232 chr16 66392134 66396419 66393517 N NA CDH5,LOC100505865 CDH11,BEAN1,CMTM2 IMR90 Hi-C 24141950 CDH5 4106 233 chr16 73101689 73103929 73102806 N NA ZFHX3 ZFHX3,HTA IMR90 Hi-C 24141950 ZFHX3 9155 234 chr16 77222842 77230939 77224742 N NA SYCE1L NA NA NA NA SYCE1L 2410 235 chr16 77490494 77492305 77491221 N NA ADAMTS18 NA NA NA NA ADAMTS18 21483 236 chr16 77617175 77621480 77619453 Y ADAMTS18 NA CLEC3A,ADAMTS18,VAT1L IMR90 Hi-C 24141950 ADAMTS18 148164 237 chr16 80059732 80062718 80061185 Y NA NA NA NA NA NA MAF 425110 238 chr16 80963636 80968840 80966340 N NA NA CMC2 IMR90 Hi-C 24141950 CENPN 71263 239 chr16 80970557 80973594 80972074 Y CENPN NA NA NA NA NA CENPN 66509 240 chr16 86712705 86716307 86714423 N NA NA FOXL1,MTHFSD,FLJ30679,FOXC2 IMR90 Hi-C 24141950 FOXL1 100590 241 chr16 86774356 86775990 86775050 N NA NA FOXC2,FOXL1 IMR90 Hi-C 24141950 FOXL1 162241 242 chr16 86960798 86964435 86963318 N NA NA FOXL1,FOXC2,MTHFSD,FLJ30679 IMR90 Hi-C 24141950 FOXL1 348683 243 chr16 87090872 87100023 87097992 N NA NA FOXC2,FLJ30679,MTHFSD,FOXL1,C16orf95 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FBXO31 325685 244 chr16 88267470 88269691 88268417 N NA NA BANP IMR90 Hi-C 24141950 ZNF469 224188 245 chr17 18964096 18966674 18965086 N NA GRAP NA NA NA NA GRAP 13760 246 chr17 19014504 19016098 19015203 N NA GRAPL NA NA NA NA GRAPL 14684 247 chr17 19083779 19086053 19084976 N NA NA NA NA NA NA GRAPL 52997 248 chr17 19090207 19092731 19091157 N NA EPN2 NA NA NA NA EPN2 47959 249 chr17 30453887 30455508 30454667 N NA RHOT1 RHOT1,LRRC37B IMR90 Hi-C 24141950 RHOT1 13965 250 chr17 32739014 32742137 32740598 N NA NA NLE1,TMEM132E,CCT6B,ZNF830,FNDC8 IMR90 Hi-C 24141950 CCL2 156718 251 chr17 36007496 36009875 36008760 Y NA SYNRG,DDX52 SYNRG,DDX52,HNF1B,LOC284100 IMR90 Hi-C 24141950 DDX52 4003 252 chr17 41392503 41394140 41393440 N NA TMEM106A BRCA1,NBR2,NBR1,RND2,VAT1,IFI35,RPL27,TMEM106A,LOC100130581 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 28609 253 chr17 41399000 41401364 41400441 N NA TMEM106A IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581,DHX8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM106A 35106 254 chr17 41668300 41670572 41669348 N NA NA LOC100130581,ARL4D,DHX8,ETV4,DUSP3,SOST,C17orf105,MEOX1 IMR90 Hi-C 24141950 DHX8 106966 255 chr17 43418552 43420085 43419290 N NA MAP3K14 LOC100133991,HEXIM1,MAP3K14,FMNL1,TEX34 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K14 24138 256 chr17 43448172 43450627 43449247 Y NA NA NA NA NA NA ARHGAP27 52385 257 chr17 44343131 44345520 44344333 Y NA KANSL1,LRRC37A KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LRRC37A 26977 258 chr17 51183034 51183870 51183596 N NA NA NA NA NA NA UTP18 1845137 259 chr17 57504271 57506805 57505179 N NA NA YPEL2,GDPD1,PRR11 IMR90 Hi-C 24141950 YPEL2 95218 260 chr17 58195879 58198944 58197383 N NA HEATR6 NA NA NA NA HEATR6 39587 261 chr17 62704471 62706990 62705301 Y SMURF2 SMURF2 SMURF2 IMR90 Hi-C 24141950 SMURF2 46085 262 chr17 62718701 62721832 62720616 N NA NA SMURF2,LOC146880 IMR90 Hi-C 24141950 LOC146880 56285 263 chr17 63118154 63120633 63119535 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 65234 264 chr17 66015216 66018276 66016159 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 13572 265 chr17 6654822 6655482 6654842 N NA XAF1,FBXO39 XAF1,MIR4520A,ALOX15P1,MIR4520B,MED31,C17orf100,FBXO39,TEKT1 IMR90 Hi-C 24141950 XAF1 3674 266 chr17 67319743 67324506 67323352 N NA NA KCNJ16,UNK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABCA6 181728 267 chr18 11945953 11949784 11947798 N NA MPPE1 IMPA2,GNAL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MPPE1 37157 268 chr18 19925948 19930982 19928501 N NA NA GATA6 IMR90 Hi-C 24141950 GATA6 176532 269 chr18 20049506 20051478 20050159 N NA NA GATA6,RBBP8 IMR90 Hi-C 24141950 GATA6 300090 270 chr18 20137459 20142765 20139943 Y GATA6 NA CTAGE1,GATA6 IMR90 Hi-C 24141950 RBBP8 370530 271 chr18 2515061 2517335 2516078 N NA NA NA NA NA NA METTL4 54154 272 chr18 26744272 26745934 26744792 N NA NA NA NA NA NA CDH2 986827 273 chr18 37548901 37553954 37550256 N NA NA NA NA NA NA PIK3C3 1981245 274 chr18 43382032 43384599 43383137 N NA NA EPG5,SLC14A2,SLC14A1,SIGLEC15 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPG5 162706 275 chr18 47216059 47218735 47217355 N NA NA MYO5B,ACAA2,SCARNA17 IMR90 Hi-C 24141950 ACAA2 121516 276 chr18 47249233 47252036 47250307 Y NA NA ACAA2,SCARNA17,MYO5B,LIPG IMR90 Hi-C 24141950 ACAA2 88215 277 chr18 57548260 57550505 57549396 N NA PMAIP1 PMAIP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PMAIP1 16687 278 chr18 71349857 71359389 71358071 N NA NA NA NA NA NA TIMM21 456357 279 chr18 8703891 8710948 8710614,8705136 N,N NA;NA CCDC165 CCDC165,NDUFV2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC165 6421 280 chr18 9015954 9019045 9017461 Y ANKRD12 NA CCDC165,ANKRD12,RALBP1 IMR90 Hi-C 24141950 NDUFV2 83583 281 chr19 15433509 15444148 15443381 N NA BRD4,AKAP8 AKAP8L,BRD4,AKAP8,ILVBL,NOTCH3,EPHX3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BRD4 42247 282 chr19 16393336 16396191 16394559 Y NWD1,KLF2 KLF2 EPS15L1,AP1M1,KLF2,CALR3 IMR90 Hi-C 24141950 KLF2 39460 283 chr19 24215501 24217647 24216763 N NA NA NA NA NA NA ZNF254 52329 284 chr19 34395091 34397793 34396409 N NA NA KCTD15 MCF7 ChIA-PET 22265404 KCTD15 107340 285 chr19 35485079 35486869 35485963 N NA ZNF792,GRAMD1A,SCN1B NA NA NA NA GRAMD1A 4377 286 chr19 37707684 37710204 37709097 N NA ZNF585A,ZNF585B,ZNF383 ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF585B 6233 287 chr19 37807893 37812304 37808940 N NA HKR1,ZNF527 NA NA NA NA HKR1 13276 288 chr19 44710968 44712789 44711864 Y NA ZNF226,ZNF227 NA NA NA NA ZNF227 3902 289 chr19 48102712 48104656 48103742 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLTSCR1 6797 290 chr19 486947 491547 489104 N NA TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 TPGS1 15950 291 chr19 50871503 50873753 50872320 N NA NR1H2,POLD1 NA NA NA NA NR1H2 5927 292 chr19 788947 791238 789516 Y NA PTBP1 NA NA NA NA PTBP1 6154 293 chr2 102133088 102135535 102134029 Y MAP4K4,MAP4K4 NA MAP4K4,RFX8,CREG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP4K4 178630 294 chr2 102757634 102760786 102758950 N NA NA IL1R2,IL1RL1,IL1RL2,MAP4K4,IL1R1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP4K4 443469 295 chr2 111073129 111075327 111074136 N NA NA NA NA NA NA LOC151009 66786 296 chr2 118942956 118945137 118943657 N NA NA NA NA NA NA INSIG2 96906 297 chr2 127972879 127978645 127976900 N NA CYP27C1 CYP27C1,BIN1,ERCC3,MAP3K2 IMR90 Hi-C 24141950 CYP27C1 9536 298 chr2 128141670 128148608 128145627,128145620 N,N NA;NA MAP3K2 CYP27C1,IWS1 IMR90 Hi-C 24141950 MAP3K2 40865 299 chr2 132438993 132450994 132440096,132440045,132442557 N,N,N NA;NA;NA C2orf27A NA NA NA NA C2orf27A 29070 300 chr2 133103775 133106737 133104979 N NA NA NA NA NA NA ANKRD30BL 88233 301 chr2 134569922 134572097 134570988 Y NA NA NCKAP5 IMR90 Hi-C 24141950 NCKAP5 243891 302 chr2 157192789 157200548 157198697 N NA NR4A2 GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NR4A2 3502 303 chr2 157256646 157257874 157257500 N NA GPD2 NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GPD2 34091 304 chr2 161060585 161068851 161062137,161064649,161064742,161067372 N,N,Y,N NA;NA;NA;NA NA ITGB6,RBMS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLA2R1 141459 305 chr2 161079094 161082475 161081015 N NA NA RBMS1,ITGB6,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLA2R1 159968 306 chr2 161084140 161088964 161086246 Y NA NA ITGB6,TANK,RBMS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLA2R1 165014 307 chr2 161097547 161099840 161098562 Y ITGB6 NA TANK,ITGB6,RBMS1 IMR90 Hi-C 24141950 PLA2R1 178421 308 chr2 178028595 178032666 178030197 Y NFE2L2 HNRNPA3 HOXD-AS2,LOC100130691,AGPS,PDE11A,NFE2L2,HNRNPA3,TTC30A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNRNPA3 44756 309 chr2 18478248 18503159 18480543 N NA NA KCNS3 IMR90 Hi-C 24141950 GEN1 543071 310 chr2 187408230 187410226 187409180 Y ITGAV,ITGAV ITGAV ITGAV MCF7 ChIA-PET 22265404 ITGAV 44564 311 chr2 20767837 20770338 20769042 Y RHOB,GDF7 NA HS1BP3,RHOB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 80526 312 chr2 20776840 20780434 20779243 Y NA NA HS1BP3,RHOB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 70430 313 chr2 208198326 208201131 208199671 Y KLF7 NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 167712 314 chr2 216324464 216326693 216325603 Y NA FN1 LOC646324,FN1,MREG IMR90 Hi-C 24141950 FN1 23673 315 chr2 216713871 216716736 216715328 N NA LOC646324 LOC646324,ATIC,FN1 IMR90 Hi-C 24141950 LOC646324 5612 316 chr2 218856219 218861741 218859990,218858918 N,N NA;NA TNS1 TNS1,RUFY4 IMR90 Hi-C 24141950 TNS1 47423 317 chr2 222643742 222645848 222644885 N NA NA NA NA NA NA EPHA4 206732 318 chr2 225964548 225966911 225965437 N NA NA DOCK10,COL4A4,RHBDD1 IMR90 Hi-C 24141950 DOCK10 57218 319 chr2 232525566 232528427 232527106 Y DIS3L2 PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 44808 320 chr2 232529596 232532498 232531257 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 40737 321 chr2 241851265 241854284 241851345,241853123 N,N NA;NA NA LOC200772,SNED1,MTERFD2 IMR90 Hi-C 24141950 SNED1 83971 322 chr2 24713059 24716586 24713923 N NA NA CENPO,NCOA1 IMR90 Hi-C 24141950 NCOA1 90760 323 chr2 38151779 38154969 38152125,38152640 N,N NA;NA NA CDC42EP3,PRKG2,CYP1B1-AS1,FAM82A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 CDC42EP3 252453 324 chr2 39349636 39352547 39351535 N NA SOS1 NA NA NA NA SOS1 2032 325 chr2 43036106 43038974 43038247 N NA NA THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MTA3 240435 326 chr2 43150999 43153066 43151843 Y NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 300679 327 chr2 43394612 43397178 43396327 N NA NA LOC100129726,ZFP36L2,THADA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 56567 328 chr2 47570821 47573738 47572247 N NA NA EPCAM,MSH2 IMR90 Hi-C 24141950 MSH2 56525 329 chr2 48337882 48339700 48339098 N NA NA FOXN2,FBXO11,PPP1R21,STON1-GTF2A1L,MSH6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXN2 202095 330 chr2 49456651 49457201 49456901 N NA NA NA NA NA NA PPP1R21 788743 331 chr2 61989978 61993052 61991491 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCT4 122754 332 chr2 64290478 64292826 64291518 N NA VPS54 LINC00309,PELI1 IMR90 Hi-C 24141950 VPS54 44264 333 chr2 64993880 64996929 64995011 Y SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2 NA SERTAD2,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 112834 334 chr2 65662476 65664093 65663319 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 2820 335 chr2 68098475 68100138 68099233 Y NA NA MEIS1,C1D IMR90 Hi-C 24141950 C1D 190021 336 chr2 85644900 85647711 85645695 N NA NA ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 ELMOD3 63057 337 chr2 95872256 95874504 95873248 N NA ZNF514,ZNF2 ZNF2 MCF7 ChIA-PET 22265404 ZNF2 41073 338 chr2 96657140 96659035 96657865 N NA LOC729234 NA NA NA NA LOC729234 17264 339 chr20 1781409 1785442 1784374 N NA NA SIRPA,LOC100289473,PDYN,STK35 IMR90 Hi-C 24141950 SIRPA 89371 340 chr20 19737310 19743923 19738509 N NA NA SLC24A3,RIN2,C20orf26,CRNKL1,LOC100130264 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RIN2 123242 341 chr20 2504392 2506719 2506015 N NA ZNF343 TMC2 IMR90 Hi-C 24141950 ZNF343 14614 342 chr20 34651948 34653618 34652734 Y NA LOC647979 LOC647979,PHF20,SCAND1,C20orf152,EPB41L1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC647979 13066 343 chr20 39942938 39948294 39946163 N NA ZHX3 ZHX3,IQGAP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 ZHX3 14199 344 chr20 48405130 48406397 48406247 N NA SLC9A8 KCNB1,B4GALT5,SLC9A8,SPATA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 22853 345 chr20 48781133 48785048 48782772 N NA UBE2V1,TMEM189-UBE2V1,CEBPB TMEM189-UBE2V1,SNAI1,RNF114,UBE2V1,PTPN1,CEBPB IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM189-UBE2V1 10798 346 chr20 51106199 51111973 51107315,51110342 N,N NA;NA NA NA NA NA NA ATP9A 721291 347 chr20 52202537 52213376 52210042 N NA ZNF217 SUMO1P1,BCAS1,ZNF217,CSRNP3,BMP7,SULF2,ZMYND8,CYP24A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323,22265404 ZNF217 2901 348 chr20 52237498 52240705 52238131,52240112 N,Y NA;ZNF217 ZNF217 SUMO1P1,BMP7,ZNF217,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 37862 349 chr20 52444410 52447352 52445305 Y NA NA ZNF217,SUMO1P1,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 244774 350 chr20 53683377 53685253 53683836 N NA NA NA NA NA NA PFDN4 858875 351 chr20 56322891 56325296 56324209 N NA PMEPA1 NA NA NA NA PMEPA1 36299 352 chr21 10492773 10493163 10492963 N NA NA NA NA NA NA TEKT4P2 524180 353 chr21 17053853 17056591 17055465 N NA USP25 USP25 IMR90 Hi-C 24141950 USP25 45905 354 chr21 30003697 30008851 30006392 Y NA NA ADAMTS1,LINC00161 IMR90 Hi-C 24141950 N6AMT1 248842 355 chr21 30448475 30450562 30449943 N NA CCT8,C21orf7 NA NA NA NA C21orf7 2311 356 chr21 36576438 36579284 36577726 Y NA NA RUNX1,SETD4,CLIC6,LOC100506385 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RUNX1 154843 357 chr21 38933283 38937834 38936344 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 193424 358 chr21 46783224 46788583 46784349 Y NA COL18A1 ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 COL18A1 36514 359 chr22 19563875 19565533 19564631 N NA NA HIRA,CLDN5,LOC150185,CLTCL1,UFD1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC45 96461 360 chr22 25348072 25374984 25356656,25349471 N,Y NA;NA KIAA1671 SGSM1,KIAA1671,TMEM211 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA1671 48957 361 chr22 28121391 28123658 28122657 N NA NA NA NA NA NA MN1 73828 362 chr22 32724519 32728353 32727489 N NA NA NA NA NA NA C22orf28 79921 363 chr22 36023257 36024690 36023731 N NA APOL6 MB MCF7 ChIA-PET 22265404 APOL6 19734 364 chr22 37940758 37943589 37942198 Y KCTD17,TRIOBP,POLR2F,MICALL1,LGALS1,ANKRD54,CARD10,CDC42EP1 CARD10,CDC42EP1 ELFN2,CYTH4,CARD10,CDC42EP1,LGALS2,GGA1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC42EP1 12882 365 chr22 41046534 41049219 41047990 N NA MKL1 ST13,MKL1,MCHR1,ADSL,SLC25A17,DNAJB7,XPNPEP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 13844 366 chr22 41417012 41419375 41418333 Y MKL1,EP300 NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EP300 69239 367 chr22 47144227 47147010 47145402 Y TRMU,CERK,TBC1D22A CERK,TBC1D22A CERK,TBC1D22A MCF7,K562 ChIA-PET 22265404 CERK 10075 368 chr3 106463353 106465434 106464315 N NA NA CBLB IMR90 Hi-C 24141950 BBX 776349 369 chr3 107147818 107151711 107150577 N NA NA LOC344595,BBX,LOC100302640 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BBX 90072 370 chr3 111392547 111394841 111393441 N NA NA CD96,PHLDB2 IMR90 Hi-C 24141950 ABHD10 302987 371 chr3 112108989 112111030 112109965 Y CD200 NA CD200,C3orf52,GCET2,BTLA,ATG3 IMR90 Hi-C 24141950 CD200 57073 372 chr3 112414127 112416448 112415105 N NA NA CD200R1L,CCDC80 IMR90 Hi-C 24141950 CCDC80 54150 373 chr3 120276698 120280402 120278337 N NA NDUFB4 FSTL1,GPR156,LRRC58,NR1I2,NDUFB4,GTF2E1 IMR90 Hi-C 24141950 NDUFB4 34726 374 chr3 123750791 123753366 123752079 N NA NA KALRN IMR90 Hi-C 24141950 KALRN 60192 375 chr3 128398720 128401641 128399943 N NA RPN1,RAB7A RAB7A,RPN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPN1 29001 376 chr3 136504499 136506665 136506144 N NA STAG1,TMEM22 NCK1,PPP2R3A,STAG1,PCCB,TMEM22,IL20RB,MSL2 IMR90 Hi-C 24141950 TMEM22 31196 377 chr3 138551789 138554905 138553811 N NA NA PIK3CB IMR90 Hi-C 24141950 PIK3CB 73588 378 chr3 138633797 138635399 138634532 Y NA NA ESYT3,PIK3CB,MRPS22,MRAS,CEP70,FAIM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIK3CB 155596 379 chr3 142896135 142898175 142897188 N NA NA CHST2,SLC9A9 IMR90 Hi-C 24141950 CHST2 57517 380 chr3 14844789 14847044 14845836 N NA FGD5 NA NA NA NA FGD5 13425 381 chr3 149056927 149059687 149058399 N NA TM4SF18,TM4SF1 TM4SF18,WWTR1,HLTF,HPS3,TM4SF1,TM4SF4,COMMD2 IMR90 Hi-C 24141950 TM4SF18 5379 382 chr3 150087652 150091303 150088886 N NA TSC22D2 TSC22D2,LOC646903,RNF13,PFN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 35485 383 chr3 152938596 152941904 152939758 N NA NA RAP2B IMR90 Hi-C 24141950 RAP2B 58567 384 chr3 155705908 155706898 155706070 N NA NA NA NA NA NA GMPS 117583 385 chr3 156891718 156895031 156892847 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 13236 386 chr3 157229400 157252064 157249844 Y VEPH1 VEPH1 C3orf55,RSRC1,SHOX2,MFSD1,VEPH1,RARRES1 IMR90 Hi-C 24141950 VEPH1 8264 387 chr3 170468126 170470807 170469348 N NA NA SLC7A14,CLDN11,PRKCI,SKIL IMR90 Hi-C 24141950 RPL22L1 117238 388 chr3 172466549 172468132 172467269 Y NA NCEH1,ECT2 NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 4166 389 chr3 174155209 174163692 174157843 Y NA NA NAALADL2,NLGN1 IMR90 Hi-C 24141950 NLGN1 1038965 390 chr3 188664552 188667096 188666173 N NA NA LPP,BCL6,LPP-AS2 IMR90 Hi-C 24141950 LPP-AS2 792676 391 chr3 194649955 194652942 194651573 N NA NA LSG1,XXYLT1,FAM43A,LOC100507391 IMR90 Hi-C 24141950 FAM43A 243333 392 chr3 196338058 196340647 196339056 Y LRRC33 WDR53,FBXO45,LRRC33 PCYT1A,TCTEX1D2,FBXO45,WDR53,CEP19,PIGX,LRRC33,PAK2,MFI2,MFI2-AS1,SENP5,UBXN7 IMR90 Hi-C 24141950 LRRC33 26009 393 chr3 196358292 196361178 196359565 N NA LRRC33 FBXO45,SENP5,C3orf43,PAK2,LRRC33,CEP19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC33 5478 394 chr3 197182552 197184132 197183585 N NA NA BDH1,DLG1,LOC100507086 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLG1 157105 395 chr3 27673234 27678003 27674737 Y NA NA SLC4A7,NEK10 IMR90 Hi-C 24141950 SLC4A7 174989 396 chr3 30332434 30338052 30334119 N NA NA RBMS3,TGFBR2 IMR90 Hi-C 24141950 TGFBR2 309942 397 chr3 30382514 30386450 30384661 N NA NA TGFBR2,GADL1 IMR90 Hi-C 24141950 TGFBR2 261544 398 chr3 30387622 30390701 30388527 N NA NA TGFBR2 IMR90 Hi-C 24141950 TGFBR2 257293 399 chr3 42513312 42516419 42515191 Y NA NA TRAK1,VIPR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SS18L2 115879 400 chr3 43287579 43290344 43288709 N NA SNRK ANO10 IMR90 Hi-C 24141950 SNRK 37660 401 chr3 44551092 44552999 44552165 N NA ZNF445 ZNF445 K562 ChIA-PET 22265404 ZNF445 31930 402 chr3 57944429 57946760 57945359 N NA FLNB FLNB,ARF4 IMR90 Hi-C 24141950 FLNB 47367 403 chr3 69587734 69592132 69591114 N NA NA NA NA NA NA FRMD4B 152304 404 chr3 97539905 97542315 97540976 N NA NA GABRR3,CPOX IMR90 Hi-C 24141950 MINA 148980 405 chr4 103059095 103062044 103060491 N NA NA NA NA NA NA NFKB1 360442 406 chr4 11905002 11907712 11906443 N NA NA NA NA NA NA HS3ST1 474465 407 chr4 120044264 120046748 120045323 N NA NA MYOZ2,USP53,SYNPO2,C4orf3 IMR90 Hi-C 24141950 USP53 87034 408 chr4 123072012 123075597 123073912 N NA KIAA1109 KIAA1109 K562 ChIA-PET 22265404 KIAA1109 16161 409 chr4 123718055 123720518 123719401 Y FGF2 FGF2 FGF2,NUDT6,BBS12 IMR90 Hi-C 24141950 FGF2 27345 410 chr4 124429558 124430109 124430082 N NA NA LOC285419,SPATA5 IMR90 Hi-C 24141950 SPRY1 111602 411 chr4 129473556 129475771 129474427 N NA NA PGRMC2,PHF17,LARP1B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF17 255008 412 chr4 141158287 141160042 141159106 N NA NA MAML3,MGST2,SCOC,LOC100129858 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAML3 83054 413 chr4 141172073 141175342 141174139 N NA NA MGST2,MAML3,SCOC,LOC100129858 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAML3 96840 414 chr4 145502140 145505598 145504385 N NA NA HHIP IMR90 Hi-C 24141950 HHIP 61550 415 chr4 160116910 160119948 160117067 N NA NA FNIP2,PPID,ETFDH,C4orf45 IMR90 Hi-C 24141950 RAPGEF2 69050 416 chr4 160161358 160172666 160161998 N NA RAPGEF2 FNIP2,RAPGEF2,PPID IMR90 Hi-C 24141950 RAPGEF2 16332 417 chr4 169980103 169982549 169981263 N NA CBR4 SH3RF1,NEK1 IMR90 Hi-C 24141950 CBR4 48635 418 chr4 185456907 185459915 185458769 N NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 61181 419 chr4 190970367 190972148 190971024 N NA NA NA NA NA NA FRG1 108393 420 chr4 2606396 2610897 2606578 N NA FAM193A FAM193A IMR90 Hi-C 24141950 FAM193A 16262 421 chr4 3288487 3300538 3294256 N NA RGS12 RGS12,HTT,HGFAC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RGS12 15336 422 chr4 55807550 55810071 55808331 N NA NA KIT IMR90 Hi-C 24141950 KDR 181691 423 chr4 56038002 56040560 56039520 N NA KDR NA NA NA NA KDR 46240 424 chr4 78774235 78776849 78775746 Y NA CNOT6L,MRPL1 MRPL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL1 6956 425 chr4 90458832 90460716 90459454 N NA NA NA NA NA NA LOC644248 296836 426 chr4 90809061 90811557 90810678 Y MMRN1 SNCA,MMRN1 NA NA NA NA MMRN1 4495 427 chr5 102093657 102102606 102093824 N NA NA PAM,PPIP5K2 IMR90 Hi-C 24141950 PAM 98921 428 chr5 132117451 132118955 132118075 N NA KIF3A,SEPT8,SHROOM1 SEPT8,RAD50,IL4,SHROOM1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SEPT8 4384 429 chr5 133800970 133803326 133801936 N NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 53372 430 chr5 138896667 138898230 138897705 Y MATR3,MATR3,DNAJC18,PSD2 TMEM173,UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 34324 431 chr5 139486298 139489877 139487346 N NA PURA,IGIP NRG2,CYSTM1,IGIP IMR90 Hi-C 24141950 PURA 3831 432 chr5 14010192 14013472 14011780 N NA NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIO 130357 433 chr5 14034729 14038168 14036375 Y TRIO NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIO 105661 434 chr5 146914323 146916478 146915394 Y DPYSL3 DPYSL3 DPYSL3 IMR90 Hi-C 24141950 DPYSL3 24704 435 chr5 149866620 149874963 149867259 N NA RPS14,NDST1 NDST1,RBM22,MYOZ3,SYNPO,RPS14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDST1 12711 436 chr5 151077890 151079605 151078926 Y ATOX1,SPARC SPARC SPARC,ATOX1 IMR90 Hi-C 24141950 SPARC 11275 437 chr5 159591085 159593792 159592551 N NA PWWP2A TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2,C5orf54 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PWWP2A 44633 438 chr5 159595522 159597792 159596497 Y NA PWWP2A TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2,C5orf54 IMR90 Hi-C 24141950 PWWP2A 49070 439 chr5 163287424 163290841 163288874 N NA NA NA NA NA NA MAT2B 357193 440 chr5 180524243 180524882 180524564 N NA NA NA NA NA NA TRIM7 107295 441 chr5 180528575 180529749 180529082 N NA NA MGAT1 IMR90 Hi-C 24141950 TRIM7 102428 442 chr5 21340658 21345951 21341948 N NA NA NA NA NA NA GUSBP1 113638 443 chr5 34243700 34246429 34244865 N NA NA NA NA NA NA C1QTNF3-AMACR 119067 444 chr5 34584026 34589600 34586090,34587837 N,Y NA;NA NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 66833 445 chr5 39525324 39528767 39527023 N NA NA DAB2,C9 IMR90 Hi-C 24141950 DAB2 99989 446 chr5 39540885 39544576 39543250 N NA NA DAB2,FYB,C9,PRKAA1,TTC33,RPL37,CARD6 IMR90 Hi-C 24141950 DAB2 115550 447 chr5 56730056 56733500 56731794 Y NA NA PLK2,ACTBL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPBP1 260281 448 chr5 56736656 56738776 56737891 N NA NA PLK2,ACTBL2 IMR90 Hi-C 24141950 GPBP1 266881 449 chr5 56788221 56792083 56790622 Y NA NA ACTBL2,PLK2 IMR90 Hi-C 24141950 GPBP1 318446 450 chr5 57552816 57556684 57555487 N NA NA PLK2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLK2 199282 451 chr5 60587129 60599943 60597805 Y NA ZSWIM6 NDUFAF2,ZSWIM6,C5orf43 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZSWIM6 28157 452 chr5 64397637 64399669 64398956 Y NA NA ADAMTS6,CWC27,PPWD1,CENPK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CWC27 332882 453 chr5 69139239 69143180 69140399 N NA NA NA NA NA NA SERF1A 177892 454 chr5 69696043 69700429 69697149 N NA GTF2H2B NA NA NA NA GTF2H2B 10768 455 chr5 70014295 70020504 70015667 N NA NA NA NA NA NA SERF1A 175986 456 chr5 70584374 70587008 70585587 N NA NA NA NA NA NA BDP1 164434 457 chr5 71851516 71855504 71852854 Y TNPO1 NA TNPO1,ZNF366,PTCD2 IMR90 Hi-C 24141950 PTCD2 235316 458 chr5 71892095 71894098 71893283 N NA NA TNPO1,ZNF366 IMR90 Hi-C 24141950 TNPO1 218320 459 chr5 76085506 76088008 76086361 N NA F2RL1 NCRUPAR,F2R,IQGAP2 IMR90 Hi-C 24141950 F2RL1 26825 460 chr5 81147216 81148788 81147882 Y NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP2 100144 461 chr5 81651720 81656378 81653272 Y RPS23 NA ATP6AP1L,XRCC4,VCAN IMR90 Hi-C 24141950 RPS23 77485 462 chr5 81683138 81686930 81684001 N NA NA VCAN IMR90 Hi-C 24141950 RPS23 108903 463 chr5 81691500 81695312 81692906 Y NA NA VCAN IMR90 Hi-C 24141950 RPS23 117265 464 chr5 86490131 86492500 86491403 N NA NA RASA1,MIR4280 IMR90 Hi-C 24141950 RASA1 71570 465 chr5 90575303 90577756 90576967 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 98408 466 chr5 95900940 95903945 95902415 N NA NA PCSK1,CAST,ELL2,C5orf27,SPATA9 IMR90 Hi-C 24141950 CAST 93796 467 chr5 95918558 95952898 95920615 N NA CAST C5orf27,ELL2,PCSK1,SPATA9,GLRX,CAST,RIOK2,ERAP1,LIX1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CAST 44843 468 chr5 96881082 96883416 96881590 N NA NA FLJ35946,RGMB IMR90 Hi-C 24141950 RIOK2 362077 469 chr5 97174912 97177395 97176612 N NA NA RGMB,FLJ35946 IMR90 Hi-C 24141950 RIOK2 655907 470 chr5 99381657 99390176 99382175,99388124 N,Y NA;NA NA NA NA NA NA LOC100133050 333782 471 chr6 100676004 100678182 100676967 Y NA NA SIM1 IMR90 Hi-C 24141950 ASCC3 651042 472 chr6 100744278 100746206 100745010 N NA NA SIM1 IMR90 Hi-C 24141950 ASCC3 583018 473 chr6 112293782 112295588 112294475 Y REV3L,TRAF3IP2,FYN NA FYN,TRAF3IP2,TRAF3IP2-AS1,REV3L IMR90 Hi-C 24141950 FYN 99127 474 chr6 113424205 113425110 113424221 N NA NA FLJ34503,MARCKS IMR90 Hi-C 24141950 MARCKS 753417 475 chr6 11606401 11616136 11608738,11614291 N,N NA;NA NA TMEM170B,HIVEP1,EDN1,ADTRP IMR90 Hi-C 24141950 HIVEP1 396588 476 chr6 11652595 11655602 11653633 N NA NA HIVEP1,EDN1,ADTRP,TMEM170B IMR90 Hi-C 24141950 HIVEP1 357122 477 chr6 121840945 121845487 121842848 N NA NA GJA1 IMR90 Hi-C 24141950 GJA1 84200 478 chr6 12572684 12575152 12573524 Y NA NA EDN1,TMEM170B IMR90 Hi-C 24141950 EDN1 282155 479 chr6 12584470 12587163 12585756 N NA NA EDN1,TMEM170B IMR90 Hi-C 24141950 EDN1 293941 480 chr6 130328068 130331379 130329571 N NA L3MBTL3 L3MBTL3 IMR90 Hi-C 24141950 L3MBTL3 8349 481 chr6 132382914 132386604 132384852 N NA NA LOC100507254,CTGF,ENPP1 IMR90,K562,HELA,GM12878,H1ESC Hi-C,5C 24141950,22955621 LOC100507254 68514 482 chr6 134742473 134745790 134744094 Y SGK1,SGK1,SGK1 NA SGK1,LOC154092,ALDH8A1 IMR90 Hi-C 24141950 TBPL1 469165 483 chr6 139859328 139861988 139860476 N NA NA CITED2,LOC100132735 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CITED2 163543 484 chr6 140891608 140895341 140893469 Y NA NA NA NA NA NA CITED2 1195823 485 chr6 144536618 144538097 144537683 Y NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 STX11 64964 486 chr6 148592409 148598586 148593434 N NA NA SASH1 IMR90 Hi-C 24141950 SASH1 65143 487 chr6 150781158 150781371 150781263 N NA NA PLEKHG1,IYD IMR90 Hi-C 24141950 PLEKHG1 139628 488 chr6 156667484 156670235 156669265 N NA NA NA NA NA NA ARID1B 428829 489 chr6 157006839 157009950 157008252 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 89114 490 chr6 163774226 163778158 163776469 Y QKI NA DKFZp451B082,PACRG IMR90 Hi-C 24141950 QKI 57517 491 chr6 168099142 168101661 168100339 Y NA NA NA NA NA NA MLLT4-AS1 125815 492 chr6 21586902 21590634 21588443 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 3338 493 chr6 22880382 22882079 22881216 N NA NA CDKAL1,LINC00340,SOX4,LOC729177 IMR90 Hi-C 24141950 LINC00340 1213707 494 chr6 24742972 24744725 24744024 Y TDP2,C6orf62 C6orf62,GMNN GMNN,FAM65B,KIAA0319,CMAHP,C6orf62 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C6orf62 23569 495 chr6 26321486 26323735 26322911 Y NA BTN3A2 HIST1H1D,HIST1H4F,ABT1,HIST1H4G,HMGN4,HIST1H3F,HIST1H2BH,HIST1H2BI,HIST1H3G,HCG11,HIST1H4I,HIST1H2BK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 41663 496 chr6 27203271 27203739 27203355 Y NA NA OR2B2,LOC100131289,ZNF184 IMR90 Hi-C 24141950 HIST1H2BK 88634 497 chr6 27446474 27448367 27447011 Y NA ZNF184 ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF184 5577 498 chr6 28908743 28909325 28908769 N NA TRIM27 TRIM27,LOC401242,ZNF311 IMR90 Hi-C 24141950 TRIM27 16975 499 chr6 30482263 30485534 30484041 N NA HLA-E,PRR3,GNL1 HLA-E,PPP1R10,MRPS18B,ABCF1,PRR3,GNL1 MCF7,K562 ChIA-PET 22265404 HLA-E 25080 500 chr6 3063212 3066454 3064442 N NA RIPK1 NQO2 K562 ChIA-PET 22265404 RIPK1 10604 501 chr6 30714650 30717837 30716101 Y HLA-E,PPP1R10,KIAA1949,KIAA1949,IER3 MDC1,TUBB,FLOT1,IER3 PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1,MDC1,C6orf136,DHX16,SFTA2,CCHCR1,PSORS1C1,PSORS1C2 IMR90 Hi-C 24141950 IER3 2323 502 chr6 35698467 35701465 35699807 N NA NA ARMC12 MCF7 ChIA-PET 22265404 SRPK1 187492 503 chr6 3825356 3827757 3826370 Y C6orf145 FAM50B SLC22A23,TUBB2B IMR90 Hi-C 24141950 FAM50B 21875 504 chr6 3891713 3914580 3912365 N NA FAM50B SLC22A23,FAM50B,BPHL,RIPK1,TUBB2B,SLIT3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 FAM50B 42081 505 chr6 4015178 4019462 4018964 N NA PRPF4B PRPF4B K562 ChIA-PET 22265404 PRPF4B 2107 506 chr6 44025932 44028359 44026896 Y NFKBIE,MAD2L1BP NA RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223,XPO5,MRPL14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL14 66832 507 chr6 48076246 48080064 48078586 N NA PTCHD4 NA NA NA NA PTCHD4 39821 508 chr6 53222909 53225546 53224279 Y NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 8932 509 chr6 72187338 72190028 72188738 Y NA NA OGFRL1 IMR90 Hi-C 24141950 LINC00472 56890 510 chr6 79301481 79315178 79313830 N NA NA NA NA NA NA IRAK1BP1 262011 511 chr6 86111609 86115974 86114067 N NA NT5E NT5E,SNX14 IMR90 Hi-C 24141950 NT5E 43328 512 chr7 100432904 100435945 100434365 Y SAP25,EPHB4 EPHB4,SLC12A9,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHB4 7761 513 chr7 100894278 100896470 100895693 N NA ZNHIT1,PLOD3,CLDN15,FIS1 NA NA NA NA FIS1 5907 514 chr7 104584410 104587143 104585815 Y MLL5 LOC100216546 LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100216546 44469 515 chr7 106414189 106417632 106416207 N NA NA CCDC71L,HBP1,NAMPT,CBLL1,PIK3CG,PRKAR2B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PIK3CG 88292 516 chr7 112031077 112032469 112031922 N NA IFRD1 DOCK4,ZNF277,IFRD1 IMR90 Hi-C 24141950 IFRD1 30730 517 chr7 115930721 115968978 115968055,115957108 N,Y NA;NA NA CAV2,CAV1,MET,ST7,WNT2,CAPZA2,TES IMR90,H1ESC,HELA,MCF7,K562 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 TES 80174 518 chr7 115993312 115999013 115994768 N NA NA CAV2,CAV1,TES,MET,ST7,ST7-AS2 IMR90,H1ESC,GM12878,HELA,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 CAV2 140642 519 chr7 12754216 12756565 12755482 Y VWDE,ARL4A ARL4A NA NA NA NA ARL4A 27764 520 chr7 128171366 128183253 128172522 N NA NA IMPDH1,HILPDA,METTL2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 METTL2B 54583 521 chr7 134297652 134300329 134298537 N NA BPGM AKR1B10,AKR1B1,AKR1B15,BPGM,CALD1 IMR90 Hi-C 24141950 BPGM 31202 522 chr7 147633 150572 149359 N NA FAM20C FAM20C IMR90 Hi-C 24141950 FAM20C 42397 523 chr7 154996324 155000490 154997825 N NA NA INSIG1,LOC202781,PAXIP1 K562,MCF7 ChIA-PET 22265404 INSIG1 88996 524 chr7 22756751 22759229 22757953 Y NA IL6 IL6,LOC100506178,TOMM7 IMR90 Hi-C 24141950 IL6 7537 525 chr7 26437434 26440153 26438621,26438221 N,N NA;NA NA LOC441204 MCF7,K562 ChIA-PET 22265404 CBX3 196603 526 chr7 2902524 2904473 2903464 Y LFNG,LFNG,TTYH3,GNA12 GNA12 GNA12,AMZ1,FOXK1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 GNA12 18565 527 chr7 4681044 4683095 4681709 N NA FOXK1 SDK1,FOXK1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXK1 38835 528 chr7 5593820 5597530 5595943 Y CCZ1,ACTB FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 23588 529 chr7 6120176 6121977 6121171 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 21316 530 chr7 65956713 65960613 65958627 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 82885 531 chr7 66053302 66058932 66057353 N NA LOC493754,KCTD7 KCTD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC493754 9804 532 chr7 66142971 66152114 66147005 N NA KCTD7 ASL,CRCP,KCTD7,RABGEF1,LOC493754 IMR90 Hi-C 24141950 KCTD7 49103 533 chr7 6768567 6770878 6769382 N NA ZNF12,PMS2CL ZNF12 K562 ChIA-PET 22265404 PMS2CL 4058 534 chr7 73416016 73419093 73417209 N NA NA ELN,MLXIPL,EIF4H,WBSCR28,LIMK1,WBSCR27,CLDN4,CLIP2 IMR90 Hi-C 24141950 LIMK1 79014 535 chr7 90223358 90243915 90226014 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CDK14 94797 536 chr7 93777871 93780482 93779651 N NA NA GNG11 IMR90 Hi-C 24141950 BET1 144181 537 chr7 93810569 93812337 93811519 Y TFPI2,GNG11 NA TFPI2,BET1,GNGT1 IMR90 Hi-C 24141950 BET1 176879 538 chr7 94003872 94005424 94005110 Y NA COL1A2 NA NA NA NA COL1A2 18449 539 chr7 95237820 95240061 95238665 N NA PDK4 NA NA NA NA PDK4 11895 540 chr7 97718969 97719572 97719282 N NA LMTK2 LMTK2 IMR90 Hi-C 24141950 LMTK2 16625 541 chr8 107094335 107096815 107095435 N NA NA NA NA NA NA OXR1 185591 542 chr8 11330587 11333199 11332058 N NA FAM167A C8orf12,BLK IMR90 Hi-C 24141950 FAM167A 6311 543 chr8 11337522 11339864 11338555 N NA FAM167A C8orf12,BLK IMR90 Hi-C 24141950 FAM167A 13246 544 chr8 11734234 11736586 11735100 N NA CTSB CTSB,BLK,FDFT1,FAM167A,GATA4 IMR90 Hi-C 24141950 CTSB 8588 545 chr8 118730489 118732911 118731716 N NA NA NA NA NA NA MED30 197524 546 chr8 127836741 127838049 127837225 N NA NA PVT1,MYC,LOC727677 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM84B 266030 547 chr8 130696601 130698745 130697733 N NA NA PVT1,MYC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM49B 330152 548 chr8 135843094 135845626 135844723 N NA NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ST3GAL1 1258911 549 chr8 141474296 141475687 141474919 Y NA CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 CHRAC1 45710 550 chr8 142031169 142034651 142032762 N NA PTK2 PTK2,DENND3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTK2 19757 551 chr8 142046017 142049691 142048096 Y PTK2 PTK2 PTK2,DENND3,SLC45A4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTK2 34605 552 chr8 16605486 16641716 16607084 N NA NA TUSC3,MSR1,SGCZ,ZDHHC2,EFHA2 IMR90 Hi-C 24141950 EFHA2 243031 553 chr8 1692652 1695358 1693912 Y CLN8 CLN8 ARHGEF10,CLN8,MIR596,KBTBD11,ZNF596 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLN8 16512 554 chr8 20537595 20537942 20537783 N NA NA NA NA NA NA ATP6V1B2 482891 555 chr8 26122611 26126296 26124158 N NA PPP2R2A PPP2R2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2R2A 22711 556 chr8 26305786 26314269 26307296 Y NA NA BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PNMA2 57214 557 chr8 29520259 29524413 29522915,29521011 Y,N KIF13B;NA NA C8orf75,LOC286135,MIR548O2,TMEM66,DUSP4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 311992 558 chr8 39916287 39919023 39917315 N NA NA C8orf4,ZMAT4 IMR90 Hi-C 24141950 C8orf4 91964 559 chr8 39975847 39978003 39976700 Y IDO1 C8orf4 C8orf4 IMR90 Hi-C 24141950 C8orf4 32984 560 chr8 41996437 41999661 41998339 Y NA AP3M2 KAT6A,ANK1,POLB,AP3M2,VDAC3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AP3M2 10803 561 chr8 49342113 49345146 49343867 N NA NA SNAI2 IMR90 Hi-C 24141950 UBE2V2 421118 562 chr8 49426593 49428261 49427447 N NA NA SNAI2 IMR90 Hi-C 24141950 SNAI2 405738 563 chr8 55123242 55126760 55125053 Y ATP6V1H,ATP6V1H NA SOX17 IMR90 Hi-C 24141950 MRPL15 75461 564 chr8 55247507 55253095 55249123,55251866 N,N NA;NA NA NA NA NA NA SOX17 117400 565 chr8 55293765 55296077 55294809 N NA NA NA NA NA NA SOX17 74418 566 chr8 59635812 59638346 59636778 N NA NA NA NA NA NA NSMAF 63408 567 chr8 61563296 61567336 61564700 N NA CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 23988 568 chr8 61820480 61822916 61821735 Y CHD7 NA NA NA NA NA CHD7 229156 569 chr8 78265601 78275536 78268893 N NA NA NA NA NA NA PEX2 352321 570 chr8 80695749 80697339 80696173 N NA HEY1 MRPS28,HEY1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEY1 15651 571 chr8 8151943 8154996 8154006 Y NA NA MFHAS1,SGK223,CLDN23,FLJ10661 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FLJ10661 65851 572 chr8 8931712 8934472 8932566 Y CLDN23,PPP1R3B NA PPP1R3B,ERI1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ERI1 71398 573 chr8 8938785 8941037 8939831 Y CLDN23,ERI1,PPP1R3B NA ERI1,PPP1R3B,TNKS IMR90 Hi-C 24141950 PPP1R3B 68115 574 chr8 8944414 8947508 8946219 N NA NA ERI1,PPP1R3B,TNKS IMR90 Hi-C 24141950 PPP1R3B 61644 575 chr9 107753022 107755368 107753796 N NA NA ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NIPSNAP3A 243053 576 chr9 110399033 110401953 110400176 N NA NA KLF4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF4 146986 577 chr9 132174729 132177668 132176098 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 73271 578 chr9 132222146 132223752 132223087 Y C9orf106,TOR1B LOC100506190 PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 27187 579 chr9 132243316 132248088 132245584 N NA LOC100506190 PPP2R4,CRAT,IER5L,C9orf106,LOC100506190,C9orf50,METTL11A IMR90 Hi-C 24141950 LOC100506190 2851 580 chr9 13270315 13280719 13279059 N NA MPDZ MPDZ,NFIB IMR90 Hi-C 24141950 MPDZ 19950 581 chr9 134248344 134250239 134248939 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 55238 582 chr9 134272387 134296115 134279634,134272983 N,N NA;NA PRRC2B PRRC2B,NUP214,FAM78A,PPAPDC3,POMT1,UCK1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PRRC2B 9362 583 chr9 13567406 13569414 13568827 Y NA NA NFIB IMR90 Hi-C 24141950 MPDZ 317041 584 chr9 13706698 13709331 13707987 N NA NA NA NA NA NA MPDZ 456333 585 chr9 139541736 139545788 139543470 N NA EGFL7,AGPAT2 SEC16A,C9orf163 K562 ChIA-PET 22265404 EGFL7 7520 586 chr9 18437239 18439365 18438446 N NA ADAMTSL1 FAM154A,ADAMTSL1 IMR90 Hi-C 24141950 ADAMTSL1 34714 587 chr9 19229703 19237388 19230611 N NA NA DENND4C,PLIN2 IMR90 Hi-C 24141950 DENND4C 53361 588 chr9 21676613 21680168 21677873 Y NA NA MIR31HG IMR90 Hi-C 24141950 MIR31HG 116916 589 chr9 21680724 21686962 21684105 N NA NA MIR31HG IMR90 Hi-C 24141950 MTAP 115673 590 chr9 21687476 21690290 21688688 N NA NA MIR31HG IMR90 Hi-C 24141950 MTAP 112345 591 chr9 36485072 36489299 36487787 N NA NA RNF38,MELK IMR90 Hi-C 24141950 MELK 83560 592 chr9 39811971 39818408 39816751 N NA NA NA NA NA NA CNTNAP3 523671 593 chr9 41430253 41435650 41432765 N NA NA NA NA NA NA MGC21881 519426 594 chr9 41818978 41821293 41820066 N NA NA NA NA NA NA MGC21881 133783 595 chr9 41822425 41826831 41825195 N NA NA NA NA NA NA MGC21881 128245 596 chr9 44244556 44246348 44245750 N NA NA NA NA NA NA CNTNAP3B 559671 597 chr9 5498978 5502382 5500130 Y NA CD274,PDCD1LG2 NA NA NA NA PDCD1LG2 8163 598 chr9 65575557 65589151 65577678 N NA NA NA NA NA NA AQP7P1 1700341 599 chr9 66552147 66555398 66553554 N NA NA NA NA NA NA AQP7P1 734094 600 chr9 6679736 6685845 6681316 Y UHRF2,KDM4C NA KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 71796 601 chr9 66915660 66929752 66916460 N NA NA NA NA NA NA AQP7P1 359740 602 chr9 73032797 73037073 73034881 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 3224 603 chr9 73093773 73096411 73095693 N NA NA TRPM3,SMC5,KLF9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF9 64200 604 chr9 74919172 74921272 74920247 N NA NA TMC1 IMR90 Hi-C 24141950 ZFAND5 58891 605 chr9 75610569 75613919 75612500 Y NA ALDH1A1 ALDH1A1 IMR90 Hi-C 24141950 ALDH1A1 42336 606 chrX 125605601 125607806 125606223 N NA NA NA NA NA NA STAG2 2511126 607 chrX 13137386 13139296 13138379 N NA NA FAM9C,LOC100133123,TMSB4X IMR90 Hi-C 24141950 TMSB4X 144160 608 chrX 139011628 139016515 139015528 N NA NA MIR505,ATP11C MCF7 ChIA-PET 22265404 ATP11C 97181 609 chrX 25958127 25961592 25960235 N NA NA NA NA NA NA POLA1 1246063 610 chrX 39870709 39874408 39872462 N NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 162174 611 chrX 46184242 46186480 46185280 N NA NA NA NA NA NA ZNF673 120144 612 chrX 48533651 48536377 48534916 N NA SUV39H1 NA NA NA NA SUV39H1 18754 613 chrX 54664610 54668341 54665832 Y NA NA ITIH6,MAGED2 MCF7 ChIA-PET 22265404 GNL3L 107966