Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 10959818 10961382 10960278 N NA NA PEX14,CASZ1,C1orf127,TARDBP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CASZ1 103111 2 chr1 118319235 118321516 118319448 N NA NA NA NA NA NA GDAP2 150786 3 chr1 143180261 143182022 143181002 N NA NA NA NA NA NA LOC100286793 562565 4 chr1 143671850 143675282 143673453 N NA NA NA NA NA NA LOC100286793 69305 5 chr1 147805791 147808259 147807094 Y NA NA NA NA NA NA NBPF24 181190 6 chr1 147859366 147861703 147861027 N NA NA NA NA NA NA NBPF14 164145 7 chr1 147873899 147875908 147874758,147874645 N,N NA;NA NA NA NA NA NA NBPF14 149940 8 chr1 148247109 148248672 148248230 N NA NA NA NA NA NA NBPF14 221261 9 chr1 149214724 149216422 149215693 Y NA NA NA NA NA NA LOC388692 63054 10 chr1 152018051 152022270 152020591 N NA S100A11 S100A11,THEM4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 S100A11 8540 11 chr1 152925041 152927690 152926825 N NA NA LCE3E,SPRR3,IVL,SPRR1A,LCE3A,SPRR2F IMR90 Hi-C 24141950 SPRR1B 75989 12 chr1 161367832 161370810 161369548 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 83666 13 chr1 16838962 16843006 16840964 N NA CROCCP3 NECAP2,SPATA21,CROCCP3,NBPF1,CROCC,CROCCP2,MST1P2,MIR3675,ESPNP,ARHGEF19,C1orf144,FBXO42 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCCP3 19766 14 chr1 17230173 17232746 17231511 Y PADI4,PADI2 CROCC CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCC 15699 15 chr1 172607378 172609484 172608516 N NA NA C1orf9,FASLG IMR90 Hi-C 24141950 C1orf9 105118 16 chr1 173989677 173992674 173991599 N NA RC3H1 ZBTB37,RC3H1,GAS5 IMR90 Hi-C 24141950 RC3H1 27467 17 chr1 181103627 181105788 181104682 Y STX6,MR1,IER5 IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 45989 18 chr1 181127590 181130268 181128997 N NA NA STX6,KIAA1614,MR1,XPR1,ACBD6,IER5 IMR90 Hi-C 24141950 IER5 69952 19 chr1 19335474 19338872 19337541 N NA NA UBR4,IFFO2,ALDH4A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFFO2 52648 20 chr1 199727223 199729292 199728512 N NA NA C1orf98 IMR90 Hi-C 24141950 C1orf98 613628 21 chr1 200642524 200645751 200643696 N NA DDX59 KIF14,CAMSAP2,DDX59,CACNA1S IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DDX59 3398 22 chr1 201227773 201231070 201229824 N NA NA NA NA NA NA TMEM9 104141 23 chr1 201234585 201238343 201235596,201237980 N,N NA;NA NA IGFN1,PKP1,LAD1,TNNT2,TNNI1 IMR90 Hi-C 24141950 TNNT2 108462 24 chr1 201243181 201245455 201244524 Y PKP1 NA PKP1,TMEM9,LAD1,TNNI1,IGFN1,TNNT2 IMR90 Hi-C 24141950 TNNT2 101350 25 chr1 204475928 204476735 204476242 N NA PIK3C2B,MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 8772 26 chr1 208019181 208022989 208021855 N NA NA CD34 IMR90 Hi-C 24141950 CD46 93798 27 chr1 208135064 208138254 208137034 Y NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CD46 209681 28 chr1 208980085 208982004 208981173 N NA NA NA NA NA NA PLXNA2 562420 29 chr1 209527852 209531241 209528250,209530378 N,N NA;NA NA MIR205HG IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MIR205HG 70927 30 chr1 209539036 209545793 209543411 N NA NA MIR205HG MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 MIR205HG 56375 31 chr1 209555566 209564134 209557824,209561704 N,N NA;NA MIR205HG MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 38034 32 chr1 209576684 209580285 209577887 N NA MIR205HG MIR205HG MCF7 ChIA-PET 22265404 MIR205HG 21883 33 chr1 209583297 209591330 209584594,209583771,209585362,209589551 N,N,N,Y NA;NA;NA;LAMB3,LAMB3,IRF6,LOC642587 MIR205HG MIR205HG IMR90 Hi-C 24141950 MIR205HG 10838 34 chr1 209988099 209991657 209989544 Y LOC642587,LAMB3,LAMB3,IRF6 C1orf74,IRF6,DIEXF DIEXF,IRF6,TRAF3IP3,SYT14 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 IRF6 8579 35 chr1 209996078 209998056 209997112 Y NA C1orf74,IRF6,DIEXF TRAF3IP3,IRF6,DIEXF,SYT14,C1orf74 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DIEXF 3256 36 chr1 211806040 211807489 211806582 N NA NEK2 LINC00467,TRAF5,SLC30A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NEK2 41483 37 chr1 218671112 218673072 218672096 Y NA NA TGFB2,LOC643723,LOC728463 IMR90 Hi-C 24141950 LOC728463 152092 38 chr1 218878827 218880938 218879770 N NA NA LOC728463,TGFB2,RRP15,LYPLAL1,LOC643723 IMR90 Hi-C 24141950 LOC728463 359807 39 chr1 224179760 224182397 224180377 Y NA NA NA NA NA NA FBXO28 119394 40 chr1 224685713 224687715 224686686 N NA NA WDR26,CNIH3 IMR90 Hi-C 24141950 WDR26 63712 41 chr1 230593820 230596897 230594910 N NA NA NA NA NA NA PGBD5 80429 42 chr1 232277636 232279640 232278514 N NA NA PCNXL2 IMR90 Hi-C 24141950 SIPA1L2 371603 43 chr1 234635097 234636761 234635161 N NA TARBP1 LOC100506810,RBM34,IRF2BP2,LINC00184,LOC100506795 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TARBP1 20248 44 chr1 235114951 235117647 235116777 N NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 174609 45 chr1 235132265 235134159 235133626 N NA NA LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 158097 46 chr1 236080097 236082604 236080960 Y LYST,GPR137B LYST B3GALNT2,LYST,NID1 IMR90 Hi-C 24141950 LYST 49877 47 chr1 242973715 242975790 242975029 N NA NA NA NA NA NA PLD5 285717 48 chr1 242988490 242991665 242990368 N NA NA NA NA NA NA PLD5 300492 49 chr1 24619983 24622606 24621551 N NA GRHL3 LOC284632,IL28RA,C1orf201,RCAN3,GRHL3,IL22RA1,NIPAL3,RCAN3AS,MYOM3,C1orf130 IMR90 Hi-C 24141950 GRHL3 23206 50 chr1 249166721 249169398 249167943 N NA SH3BP5L,ZNF672,ZNF692,PGBD2 ZNF692,PGBD2,MIR3124,SH3BP5L K562,MCF7 ChIA-PET 22265404 ZNF692 13406 51 chr1 26946141 26949020 26947582 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73502 52 chr1 31248863 31263120 31261588,31260858 N,N NA;NA NA LAPTM5,MECR,MATN1,LOC100129196,SNORD103A,SNORD103B,PUM1,SDC3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129196 57244 53 chr1 41342683 41344276 41343496 Y NA CITED4 KCNQ4,CTPS,NFYC,CITED4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CITED4 14665 54 chr1 48483401 48484419 48483635 N NA NA LOC388630 IMR90 Hi-C 24141950 MGC12982 583088 55 chr1 564338 570415 567479 N NA NA NA NA NA NA LINC00115 192487 56 chr1 59096684 59097237 59097221 N NA NA NA NA NA NA TACSTD2 53518 57 chr1 59220116 59223297 59221345 Y NA JUN FGGY,HSD52,LOC100131060,JUN,MIR4711 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JUN 26488 58 chr1 59386852 59389006 59388180 N NA NA LOC100131060,JUN,HSD52,FGGY,MIR4711 IMR90 Hi-C 24141950 JUN 137067 59 chr1 59396082 59400085 59398460 N NA NA FGGY,JUN,LOC100131060 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JUN 146297 60 chr1 8155720 8158152 8157011 N NA NA ERRFI1,RERE,PARK7,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 69327 61 chr1 8180363 8182951 8181301 N NA NA ERRFI1,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 93970 62 chr1 92034531 92036535 92035255 N NA NA TGFBR3,HSP90B3P,EPHX4,CDC7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC7 68127 63 chr1 92073950 92076701 92075027 N NA NA TGFBR3,HSP90B3P,CDC7,BRDT IMR90 Hi-C 24141950 CDC7 107546 64 chr1 9238118 9244478 9242069 N NA GPR157 SLC2A7,SLC25A33,GPR157,MIR34A,H6PD,SPSB1,TMEM201 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR157 48889 65 chr1 94155816 94161945 94159277 Y GCLM,DNTTIP2,BCAR3 BCAR3 BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCAR3 8431 66 chr1 94267926 94272523 94270528 N NA NA BCAR3,MIR760,DR1,LOC100131564,FNBP1L IMR90 Hi-C 24141950 DNTTIP2 72239 67 chr1 94277662 94280285 94279446 N NA NA BCAR3,MIR760,DR1,LOC100131564,FNBP1L,MTF2,CCDC18,DNTTIP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNTTIP2 64477 68 chr1 9487560 9490093 9489094 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 109435 69 chr1 95084740 95090515 95088314 N NA NA F3,SLC44A3,ABCD3 IMR90 Hi-C 24141950 F3 77327 70 chr1 95112308 95113607 95113566 N NA NA F3,ABCD3,SLC44A3 IMR90 Hi-C 24141950 F3 104895 71 chr1 95178179 95181684 95179590 Y F3 NA F3,ABCD3,ALG14 IMR90 Hi-C 24141950 F3 170766 72 chr1 95199715 95202690 95201101 N NA NA F3,ABCD3,SLC44A3 IMR90 Hi-C 24141950 CNN3 190045 73 chr1 95247825 95250829 95249334 Y NA NA ABCD3,F3,ALG14 IMR90 Hi-C 24141950 CNN3 141906 74 chr10 114120130 114121637 114121130 N NA NA GUCY2GP,ACSL5 IMR90 Hi-C 24141950 ZDHHC6 85035 75 chr10 11938984 11941715 11940320,11940311 N,N NA;NA NA NA NA NA NA C10orf47 73587 76 chr10 130990239 130991662 130991422 N NA NA MGMT IMR90 Hi-C 24141950 LOC387723 917419 77 chr10 135459354 135463542 135462668 N NA NA NA NA NA NA MTG1 251733 78 chr10 2009706 2012401 2011094 N NA NA NA NA NA NA WDR37 906930 79 chr10 2159521 2161535 2160706 N NA NA NA NA NA NA PFKP 948177 80 chr10 30234476 30241936 30236282 Y SVIL NA SVIL,MTPAP,KIAA1462,MAP3K8,MIR604 IMR90 Hi-C 24141950 SVIL 209746 81 chr10 32046734 32050565 32049195 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 167205 82 chr10 32733998 32736524 32735060 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 97885 83 chr10 33268399 33274227 33269579 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 21106 84 chr10 33422145 33424527 33423273 Y NA NA ITGB1 IMR90 Hi-C 24141950 ITGB1 174852 85 chr10 3846767 3850284 3848377 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 19294 86 chr10 3850932 3854574 3852855 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6,AKR1E2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 23459 87 chr10 3866260 3868680 3867606 Y NA KLF6 LOC338588,LOC100216001,KLF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 38787 88 chr10 43915017 43917224 43916210 N NA HNRNPF ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 10321 89 chr10 48341795 48343975 48342828 N NA NA ZNF488,LOC643650,RBP3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ANXA8 86570 90 chr10 50758989 50759901 50759112 N NA ERCC6 ARHGAP22,VSTM4 IMR90 Hi-C 24141950 ERCC6 11842 91 chr10 5332390 5336467 5333921,5336023 Y,N NA;NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 TUBAL3 110326 92 chr10 54201540 54214885 54212681,54203634 N,Y NA;DKK1 NA LOC100506939,DKK1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 DKK1 127499 93 chr10 5624861 5628354 5626324 N NA NA NET1,CALML5,ASB13 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ASB13 80204 94 chr10 5634300 5638832 5637283 N NA NA NET1,CALML5,ASB13 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ASB13 69726 95 chr10 5650011 5653581 5652470 N NA NA NET1,CALML5,CALML3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ASB13 54977 96 chr10 60194802 60197173 60195642 N NA TFAM BICC1,FAM13C IMR90 Hi-C 24141950 TFAM 49626 97 chr10 6763169 6765468 6764280 Y NA NA LOC100507127,SFMBT2 IMR90 Hi-C 24141950 LOC100507127 56092 98 chr10 6779450 6795272 6780817 N NA LOC100507127 LOC100507127 IMR90 Hi-C 24141950 LOC100507127 26288 99 chr10 69608816 69611091 69609266 Y NA SIRT1 SIRT1 K562 ChIA-PET 22265404 SIRT1 33336 100 chr10 73647894 73650890 73648927 N NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 36812 101 chr10 74019836 74022033 74021358 Y C10orf54,PSAP,DNAJB12,DDIT4 ANAPC16,DDIT4 DNAJB12 K562 ChIA-PET 22265404 DDIT4 11644 102 chr10 89911755 89913799 89912732 Y NA NA KLLN,PTEN,RNLS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTEN 288560 103 chr10 91938078 91941093 91939677 Y NA NA NA NA NA NA KIF20B 476711 104 chr10 93411509 93413784 93412582 N NA PPP1R3C LOC100188947,PPP1R3C,HECTD2 IMR90 Hi-C 24141950 PPP1R3C 18651 105 chr10 99171318 99173593 99172815 N NA RRP12,PGAM1,EXOSC1,ZDHHC16 PGAM1,RRP12,ZDHHC16,EXOSC1 MCF7,K562 ChIA-PET 22265404 RRP12 10191 106 chr11 102137159 102140434 102138908 N NA BIRC3 YAP1,BIRC2,MMP20,BIRC3,C11orf70 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BIRC3 47747 107 chr11 102175758 102178414 102177340 N NA BIRC3,BIRC2 MMP7,BIRC2,BIRC3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BIRC3 9767 108 chr11 102347043 102348547 102347755 N NA TMEM123 TMEM123,MMP20,BIRC2,BIRC3,MMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM123 23268 109 chr11 12106748 12111498 12109102 N NA MICAL2 MICAL2,DKK3,MICALCL,TEAD1,USP47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MICAL2 20640 110 chr11 124981071 124982958 124981680 N NA SLC37A2,TMEM218 CCDC15,TMEM218,PKNOX2 IMR90 Hi-C 24141950 TMEM218 7866 111 chr11 127921700 127923949 127923203 N NA NA KCNJ1,FLI1,LOC100507392 IMR90 Hi-C 24141950 FLI1 639862 112 chr11 128049684 128051639 128050492 N NA NA ETS1,FLI1,KCNJ1,TP53AIP1,LOC100507392,KCNJ5,C11orf45,ARHGAP32 IMR90 Hi-C 24141950 FLI1 512172 113 chr11 128076708 128079666 128078476 Y NA NA FLI1,ETS1,KCNJ1 IMR90 Hi-C 24141950 FLI1 484145 114 chr11 13282324 13284832 13282963 N NA ARNTL ARNTL,MICALCL IMR90 Hi-C 24141950 ARNTL 14493 115 chr11 15127640 15131073 15129027 N NA NA INSC IMR90 Hi-C 24141950 CYP2R1 213889 116 chr11 17228408 17231746 17229608 N NA PIK3C2A NA NA NA NA PIK3C2A 37054 117 chr11 1850230 1852894 1851878 N NA SYT8,TNNI2 NA NA NA NA SYT8 2780 118 chr11 28854380 28859739 28855420,28858032 Y,Y NA;NA NA BDNF-AS1,BDNF IMR90 Hi-C 24141950 METTL15 724582 119 chr11 57670435 57672840 57671368 N NA NA OR5B21 IMR90 Hi-C 24141950 TMX2-CTNND1 190440 120 chr11 61811237 61813973 61813034 N NA NA FADS2,FTH1,BEST1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FTH1 76105 121 chr11 65258650 65262881 65260380 Y BATF2,FAU,CDC42EP2,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 2352 122 chr11 68889232 68891683 68890382 N NA NA FGF4,ORAOV1,CCND1,TPCN2,MYEOV,FGF19,ANO1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPCN2 72882 123 chr11 69256540 69259804 69258387 Y CCND1 NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MYEOV 194918 124 chr11 69402525 69403590 69402933 N NA NA MRGPRF,MYEOV,TPCN2,CCND1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCND1 52283 125 chr11 71890721 71893482 71892137 N NA INPPL1 RNF121,NUMA1,LRTOMT,LAMTOR1,C11orf51,FOLR3,FOLR1 IMR90 Hi-C 24141950 INPPL1 42400 126 chr11 72895992 72898438 72897005 N NA FCHSD2,P2RY2 FCHSD2,ATG16L2,ARHGEF17,P2RY2,P2RY6,ARAP1,STARD10 IMR90,MCF7 Hi-C,3C,ChIA-PET 24141950,19890323,22265404 P2RY2 30906 127 chr11 72904538 72908059 72906431 Y NA P2RY2 FCHSD2,ATG16L2,P2RY6,ARAP1,P2RY2,STARD10,MIR4692,RELT IMR90,MCF7 Hi-C,3C,ChIA-PET 24141950,19890323,22265404 P2RY2 21285 128 chr11 73489507 73492250 73490614 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 6667 129 chr11 75945803 75947446 75946750 N NA NA C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 144434 130 chr11 88142773 88144871 88143927 N NA NA GRM5,CTSC IMR90 Hi-C 24141950 CTSC 71832 131 chr11 9384984 9386993 9386005 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 19176 132 chr11 9634606 9636940 9635278 N NA WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 39378 133 chr12 113477560 113479808 113478541 Y OAS1,OAS3,SLC24A6,SDSL,OAS2 NA OAS2,DTX1 IMR90 Hi-C 24141950 OAS3 101311 134 chr12 120728253 120730410 120729967 N NA PXN PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PXN 24679 135 chr12 127609888 127611654 127610685 Y NA NA NA NA NA NA SLC15A4 1696887 136 chr12 127756130 127759424 127758109 N NA NA NA NA NA NA SLC15A4 1549117 137 chr12 15426575 15429408 15428184 N NA NA RERG,PTPRO MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARHGDIB 312013 138 chr12 46941296 46945778 46943221 N NA NA SLC38A2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 174651 139 chr12 47069909 47072135 47070608,47072097 N,N NA;NA NA SLC38A1,SLC38A2,SLC38A4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 303264 140 chr12 47095384 47098133 47096833 Y NA NA SLC38A2,SLC38A4,SLC38A1 IMR90 Hi-C 24141950 SLC38A2 328739 141 chr12 47660493 47664366 47661574 Y NA NA FAM113B,AMIGO2 IMR90 Hi-C 24141950 AMIGO2 186759 142 chr12 47665558 47666591 47666530 N NA NA FAM113B,AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMIGO2 191824 143 chr12 47668769 47672885 47670775 Y NA NA AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMIGO2 195035 144 chr12 59433115 59437042 59434804 N NA NA LRIG3 IMR90 Hi-C 24141950 LRIG3 118853 145 chr12 65994848 66004466 65997348 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 213774 146 chr12 66026608 66030308 66028333 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 187932 147 chr12 66041059 66045877 66042928 Y NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 172363 148 chr12 66047163 66052424 66051533,66049132 N,Y NA;NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 165816 149 chr12 66062817 66064782 66063675 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 153458 150 chr12 66065657 66068457 66066881 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 HMGA2 149783 151 chr12 76337413 76339760 76338475 Y GLIPR1,PHLDA1 NA PHLDA1 MCF7 ChIA-PET 22265404 PHLDA1 85796 152 chr12 76371961 76374146 76372595 N NA NA OSBPL8,PHLDA1,KRR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 51410 153 chr12 8111375 8114029 8112641 Y NECAP1,FOXJ2,CLEC4A,SLC2A3 SLC2A3 SLC2A3 K562 ChIA-PET 22265404 SLC2A3 22483 154 chr12 8178102 8180455 8179319 Y NA FOXJ2 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 4904 155 chr12 89763298 89766790 89764563 N NA DUSP6 POC1B,LOC728084 IMR90 Hi-C 24141950 DUSP6 17002 156 chr12 89768897 89771233 89769718 N NA DUSP6 POC1B,LOC728084 IMR90 Hi-C 24141950 DUSP6 22601 157 chr12 92171415 92173000 92172142 N NA NA LOC256021 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC256021 363447 158 chr13 106747784 106750889 106749150 N NA NA EFNB2,LINC00460 IMR90 Hi-C 24141950 LINC00460 278022 159 chr13 106751774 106754206 106752652 N NA NA EFNB2 IMR90 Hi-C 24141950 LINC00460 274705 160 chr13 106754831 106757652 106756564 N NA NA EFNB2 IMR90 Hi-C 24141950 LINC00460 271259 161 chr13 106806823 106810640 106808884 N NA NA EFNB2,LINC00460 IMR90 Hi-C 24141950 LINC00460 218271 162 chr13 109908595 109911343 109909742 Y NA NA MYO16,IRS2 IMR90 Hi-C 24141950 TNFSF13B 986618 163 chr13 109920326 109922947 109921376 N NA NA IRS2 IMR90 Hi-C 24141950 TNFSF13B 998349 164 chr13 110657446 110660539 110658740 N NA NA MYO16 IMR90 Hi-C 24141950 COL4A1 298957 165 chr13 110663549 110665807 110664684 Y NA NA MYO16 IMR90 Hi-C 24141950 COL4A1 293689 166 chr13 31619221 31620818 31620082 Y ALOX5AP NA TEX26-AS1,USPL1,ALOX5AP,HSPH1,HMGB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HSPH1 115299 167 chr13 40632705 40635538 40634271 N NA NA TTL,FOXO1 IMR90 Hi-C 24141950 COG6 402941 168 chr13 40688262 40689997 40689766 N NA NA FOXO1 IMR90 Hi-C 24141950 COG6 458498 169 chr13 40810014 40812529 40810703 N NA NA NA NA NA NA FOXO1 428205 170 chr13 44714030 44717520 44716301 N NA NA TSC22D1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC122 260204 171 chr13 44883073 44885765 44884697 N NA NA TSC22D1,LACC1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TSC22D1-AS1 264267 172 chr13 45629249 45631706 45630687 N NA NA GTF2F2,KCTD4,TPT1,TPT1-AS1 IMR90 Hi-C 24141950 GTF2F2 62925 173 chr13 52093305 52095120 52094062 N NA NA INTS6,WDFY2 MCF7,K562 ChIA-PET 22265404 WDFY2 63364 174 chr13 73907363 73910719 73908899 N NA NA PIBF1 IMR90 Hi-C 24141950 KLF5 274221 175 chr13 73994204 73997019 73995522 N NA NA KLF5,PIBF1,KLF12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF5 361062 176 chr13 74001292 74005464 74003482 N NA NA KLF5,PIBF1,KLF12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF5 368150 177 chr13 80163010 80166530 80163826 N NA NA NA NA NA NA NDFIP2 107751 178 chr14 100496139 100501719 100497571 N NA EVL EVL,YY1,DEGS2,EML1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EVL 30032 179 chr14 102990943 102993264 102991702 N NA ANKRD9 ANKRD9,RCOR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD9 14815 180 chr14 105557201 105560601 105558798 N NA NA BTBD6,BRF1,JAG2,NUDT14 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDCA4 69776 181 chr14 29046053 29049234 29047255 N NA NA NA NA NA NA G2E3 1979095 182 chr14 29139412 29142218 29140801 N NA NA NA NA NA NA G2E3 1886111 183 chr14 50334318 50335783 50334976 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 METTL21D,SOS2,ARF6,C14orf182,NEMF,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 14779 184 chr14 51862237 51864580 51863014 N NA NA LOC283553,FRMD6,FRMD6-AS1 IMR90 Hi-C 24141950 FRMD6 91275 185 chr14 54719189 54720026 54719224 N NA NA NA NA NA NA CDKN3 143647 186 chr14 55568594 55571268 55570064 Y LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L LGALS3 LGALS3,DLGAP5,MAPK1IP1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LGALS3 24667 187 chr14 65146127 65148178 65147167 Y NA PLEKHG3 SPTB,PPP1R36,PLEKHG3,CHURC1-FNTB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLEKHG3 23015 188 chr14 69161004 69163393 69162089 Y NA NA ZFP36L1,RAD51B IMR90 Hi-C 24141950 ZFP36L1 99567 189 chr14 71837811 71840206 71838820 Y PCNX,SIPA1L1 NA SIPA1L1 IMR90 Hi-C 24141950 LOC145474 114372 190 chr14 75085045 75088708 75087549 Y PGF,EIF2B2,LTBP2 LTBP2 LTBP2,KIAA0317,FCF1,YLPM1,NPC2,ISCA2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LTBP2 6011 191 chr14 75695906 75698273 75697160 N NA FOS TMED10,NEK9,LOC731223,FOS,BATF,ZC2HC1C IMR90 Hi-C 24141950 FOS 47208 192 chr14 75719892 75722664 75721682 N NA FOS,LOC731223 TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOS 22817 193 chr14 77424143 77427687 77425631 N NA NA IRF2BPL MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BPL 67347 194 chr14 77498279 77501383 77500090 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 3245 195 chr15 101260551 101264314 101262141 Y NA NA ALDH1A3,LRRK1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ASB7 117796 196 chr15 101266604 101268684 101267815 N NA NA ALDH1A3,LRRK1 IMR90 Hi-C 24141950 ASB7 123849 197 chr15 22489218 22492881 22491470 N NA NA NBEAP1,NF1P2 IMR90 Hi-C 24141950 TUBGCP5 340514 198 chr15 22525577 22528310 22526965 N NA NA CHEK2P2,HERC2P3,POTEB,NF1P2,LOC348120,REREP3,LOC100130000 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 TUBGCP5 305085 199 chr15 34879381 34880969 34880337 N NA GOLGA8B AQR IMR90 Hi-C 24141950 GOLGA8B 3610 200 chr15 42782457 42784278 42783397 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 3226 201 chr15 62678144 62683802 62682664 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 VPS13C 325480 202 chr15 65595806 65598572 65596881 Y DENND4A PARP16 PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARP16 16788 203 chr15 72928756 72930978 72929281 N NA BBS4 CELF6 IMR90 Hi-C 24141950 BBS4 47542 204 chr15 83973358 83975892 83974779 N NA BNC1 BNC1,SH3GL3 IMR90 Hi-C 24141950 BNC1 19890 205 chr15 83988575 83993238 83989453,83991758 N,N NA;NA BNC1 BNC1 IMR90 Hi-C 24141950 BNC1 35107 206 chr15 84046014 84049777 84048352 Y BNC1 NA SH3GL3,BNC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BNC1 92546 207 chr15 93361697 93364406 93363716 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 NA ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 LOC100507217 61667 208 chr15 94773044 94777340 94774462 N NA NA MCTP2 IMR90 Hi-C 24141950 MCTP2 64090 209 chr16 23268603 23270718 23269622 N NA NA NA NA NA NA SCNN1G 74563 210 chr16 3236995 3239016 3238024 Y NA ZNF200 ZNF200 K562 ChIA-PET 22265404 ZNF200 46441 211 chr16 4189865 4191477 4190791 N NA NA CREBBP,ADCY9,SRL,TRAP1,CORO7-PAM16,PAM16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100507501 112313 212 chr16 54682013 54683916 54682710 N NA NA NA NA NA NA CRNDE 279163 213 chr16 57334180 57334583 57334480 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,POLR2C,GPR114,CCDC102A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 55142 214 chr16 69563575 69564592 69563694 Y NA NFAT5 NFAT5,CYB5B,TERF2,MIR1538 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAT5 35277 215 chr16 72324268 72326382 72325570 N NA NA NA NA NA NA TXNL4B 196053 216 chr16 72697482 72699867 72698978 N NA NA ZFHX3 IMR90 Hi-C 24141950 TXNL4B 569267 217 chr16 74324706 74326532 74326189 N NA PSMD7 NA NA NA NA PSMD7 4141 218 chr16 85428475 85430712 85429745 N NA NA LOC727710,LINC00311,GINS2,KIAA0182,FAM92B,KIAA0513,LOC400548 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00311 111911 219 chr16 86696777 86699725 86698325 Y NA NA FOXL1,FLJ30679,MTHFSD,FOXC2,C16orf95,FBXO31 IMR90 Hi-C 24141950 FOXL1 84662 220 chr16 87550620 87553240 87551953 N NA ZCCHC14 MAP1LC3B,ZCCHC14,KLHDC4,JPH3 IMR90 Hi-C 24141950 ZCCHC14 25160 221 chr16 87822540 87825405 87824129 N NA KLHDC4 JPH3,KLHDC4,ZCCHC14,SLC7A5,CA5A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 22942 222 chr17 13248358 13250931 13249534 N NA NA HS3ST3B1,HS3ST3A1 IMR90 Hi-C 24141950 HS3ST3A1 254313 223 chr17 13297472 13298941 13298311 N NA NA HS3ST3A1 IMR90 Hi-C 24141950 HS3ST3A1 206303 224 chr17 16930457 16932610 16931563 N NA MPRIP MPRIP,COPS3 IMR90 Hi-C 24141950 MPRIP 13464 225 chr17 18966182 18968772 18967619 N NA NA NA NA NA NA FAM83G 58122 226 chr17 19014653 19015374 19014656 N NA NA NA NA NA NA FAM83G 106593 227 chr17 19092246 19094628 19093725 N NA EPN2 NA NA NA NA EPN2 46062 228 chr17 34125711 34127872 34127109,34127065 N,N NA;NA GAS2L2,MMP28,TAF15 AP2B1,RASL10B,C17orf50,MMP28 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MMP28 3071 229 chr17 38666723 38669105 38667578 N NA TNS4 CDC6,TOP2A,IGFBP4,TNS4,CCR7,KRT42P,RARA IMR90 Hi-C 24141950 TNS4 8869 230 chr17 38673704 38683600 38674755,38678709 N,N NA;NA TNS4 IGFBP4,KRT42P,CCR7,RARA,GJD3,TOP2A,TNS4,RAPGEFL1,WIPF2,CDC6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNS4 15850 231 chr17 39808200 39812144 39811047 N NA KRT16,KRT17,EIF1 KRT19,KRT15,LOC147093,RARA,EIF1,KRT24,KRT28,TMEM99,KRT10,KRTAP2-4,LOC730755,KRTAP2-2,KRT9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KRT17 27318 232 chr17 41399785 41401685 41400600 N NA TMEM106A IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581,DHX8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM106A 35891 233 chr17 41545292 41547671 41546327 N NA DHX8 LOC100130581,ARL4D,DHX8 IMR90 Hi-C 24141950 DHX8 13663 234 chr17 44343013 44346354 44344315 Y NA LRRC37A KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LRRC37A 26143 235 chr17 45145762 45149425 45147803 N NA NA NPEPPS IMR90 Hi-C 24141950 CDC27 117240 236 chr17 51183001 51183863 51183560 N NA NA NA NA NA NA TOM1L1 1794189 237 chr17 63117068 63120283 63119500 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 64148 238 chr17 66015591 66017045 66016204 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 14803 239 chr17 69628572 69631142 69629887 Y NA NA LOC100499467,LINC00511 IMR90 Hi-C 24141950 SOX9 486019 240 chr17 75249996 75252592 75251340 N NA SEPT9 SEPT9,SRSF2,METTL23,MFSD11,SEC14L1,MGAT5B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SEPT9 24900 241 chr18 20405133 20408162 20407455 N NA NA RBBP8,CABLES1,RIOK3,GATA6,TMEM241 IMR90 Hi-C 24141950 RBBP8 105133 242 chr18 20427461 20429810 20428653 N NA NA CABLES1,RBBP8,RIOK3,GATA6,TMEM241 IMR90 Hi-C 24141950 RBBP8 83485 243 chr18 3304879 3306804 3305927 N NA MYL12B DLGAP1,TGIF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MYL12B 42768 244 chr18 33091824 33094564 33093495 Y GALNT1 INO80C NA NA NA NA INO80C 13869 245 chr18 38446836 38449395 38448175 N NA NA NA NA NA NA PIK3C3 1085804 246 chr18 43900980 43903778 43901882 N NA RNF165 RNF165 IMR90 Hi-C 24141950 RNF165 10409 247 chr18 47833073 47835308 47834770 Y NA CCDC11,MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 18381 248 chr18 52442720 52444152 52443756 N NA NA CCDC68 IMR90 Hi-C 24141950 RAB27B 51556 249 chr18 61120143 61123007 61122166 N NA VPS4B,SERPINB5 NA NA NA NA SERPINB5 21137 250 chr18 61138741 61139713 61139570 N NA VPS4B,SERPINB5 NA NA NA NA SERPINB5 4431 251 chr18 61349555 61351971 61350644 Y SERPINB5,SERPINB12,SERPINB3,SERPINB11 NA SERPINB10,SERPINB7 IMR90 Hi-C 24141950 SERPINB13 95021 252 chr18 73336251 73339065 73337777 N NA NA NA NA NA NA TSHZ1 413541 253 chr18 74330831 74332914 74331625 N NA NA ZNF516,LOC284276,ZNF407 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF516 123685 254 chr18 9016563 9018786 9017765 Y NA NA CCDC165,ANKRD12,RALBP1 IMR90 Hi-C 24141950 NDUFV2 83842 255 chr18 9647500 9649831 9648767 N NA PPP4R1 PPP4R1,VAPA,ANKRD12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PPP4R1 32900 256 chr19 37708248 37710739 37708976 N NA ZNF585B,ZNF383 ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF383 6627 257 chr19 42773715 42775983 42774959 N NA ZNF526,GSK3A,ERF,CIC,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 CIC 12834 258 chr19 47362041 47364899 47363530 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562 ChIA-PET 22265404 AP2S1 7838 259 chr19 50871760 50873362 50872548 Y NA NR1H2,POLD1 NA NA NA NA NR1H2 6318 260 chr2 102132391 102135537 102134036 Y MAP4K4,MAP4K4 NA MAP4K4,RFX8,CREG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP4K4 178628 261 chr2 112415908 112418374 112417324 Y NA NA BCL2L11,ACOXL IMR90 Hi-C 24141950 LOC541471 163216 262 chr2 113550335 113553551 113551833 Y IL36B,IL36G,IL1RN,IL1A,IL1B CKAP2L,IL1B CKAP2L,IL37,IL1A,IL1B,CHCHD5 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CKAP2L 28081 263 chr2 113915048 113918381 113915843 N NA IL1RN,PSD4 IL1RN,LOC654433,PAX8,PSD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSD4 13179 264 chr2 127974681 127976904 127975671 Y NA NA NA NA NA NA ERCC3 74848 265 chr2 157194869 157200739 157198333 N NA NA GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GPD2 91226 266 chr2 157257314 157257925 157257735 N NA GPD2 NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GPD2 34040 267 chr2 159748523 159751325 159749864 Y NA NA LY75-CD302,TANC1,WDSUB1,BAZ2B,MARCH7 IMR90 Hi-C 24141950 TANC1 73821 268 chr2 161061167 161066484 161062200,161064771 N,Y NA;NA ITGB6 ITGB6,RBMS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB6 4577 269 chr2 161076174 161079860 161077634 N NA ITGB6 RBMS1,ITGB6,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB6 19584 270 chr2 161084474 161086785 161085296 Y NA ITGB6 ITGB6,TANK,RBMS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB6 27884 271 chr2 161097146 161099763 161098435 Y ITGB6 ITGB6 TANK,ITGB6,RBMS1 IMR90 Hi-C 24141950 ITGB6 40556 272 chr2 173059696 173063670 173061143 N NA NA ITGA6 IMR90 Hi-C 24141950 DLX2 92218 273 chr2 173112127 173116374 173114133 N NA NA ITGA6 IMR90 Hi-C 24141950 DLX2 144649 274 chr2 173125039 173127257 173126220 Y ITGA6 NA ITGA6 IMR90 Hi-C 24141950 DLX2 157561 275 chr2 191463876 191473840 191472233 N NA NAB1 MFSD6,NAB1,TMEM194B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NAB1 40008 276 chr2 192034240 192036284 192035391 N NA NA MYO1B,STAT4,OBFC2A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYO1B 73823 277 chr2 192066725 192068677 192067309 N NA MYO1B MYO1B,STAT4 IMR90 Hi-C 24141950 MYO1B 41430 278 chr2 19737510 19742248 19738511,19741070 N,N NA;NA NA NA NA NA NA TTC32 359496 279 chr2 204545963 204553084 204547854,204548823,204550030,204552092 N,Y,N,Y NA;NA;NA;NA NA RAPH1,CD28 IMR90 Hi-C 24141950 RAPH1 145905 280 chr2 20547885 20551923 20550677 N NA PUM2 HS1BP3,PUM2 IMR90 Hi-C 24141950 PUM2 20741 281 chr2 208102412 208110652 208104372,208105363 N,N NA;NA NA KLF7,CREB1,METTL21A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 71798 282 chr2 208116883 208124414 208118854,208123364 N,Y NA;NA NA KLF7,CREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 86269 283 chr2 208194648 208196765 208195754 Y NA NA KLF7,CREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 164034 284 chr2 208197773 208201576 208199749 Y KLF7 NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 167159 285 chr2 220548449 220551561 220549983 N NA NA INHA,OBSL1,SLC4A3,STK11IP,EPHA4,DES,SPEG,GMPPA,ACCN4 IMR90,HELA,K562,GM12878,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 SLC4A3 56157 286 chr2 224561840 224564274 224563994 N NA NA SCG2 IMR90 Hi-C 24141950 AP1S3 138045 287 chr2 224588497 224590905 224589883 N NA NA AP1S3 MCF7 ChIA-PET 22265404 AP1S3 111414 288 chr2 226981796 226984761 226982985 N NA NA IRS1,LOC646736 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRS1 678745 289 chr2 228716972 228719710 228718151 Y NA NA WDR69 IMR90 Hi-C 24141950 AGFG1 380084 290 chr2 228726637 228729915 228728359 N NA NA NA NA NA NA AGFG1 389749 291 chr2 235165795 235168272 235167037 N NA NA SH3BP4,TRPM8,ARL4C,AGAP1,SPP2 IMR90 Hi-C 24141950 ARL4C 237421 292 chr2 238338900 238339763 238338973 N NA NA LRRFIP1,MLPH,COPS8,COL6A3,PRLH,RAB17 IMR90 Hi-C 24141950 MLPH 56115 293 chr2 238366980 238370182 238368559 N NA MLPH COPS8,LRRFIP1,MLPH,PRLH,COL6A3 IMR90 Hi-C 24141950 MLPH 25696 294 chr2 238382407 238385558 238384592 Y LRRFIP1 MLPH LRRFIP1,MLPH,COL6A3,RAB17,COPS8,PRLH IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MLPH 10320 295 chr2 239636159 239638385 239637200 N NA NA LOC151171,TRAF3IP1,LOC150935,ASB1,TWIST2 IMR90 Hi-C 24141950 TWIST2 118288 296 chr2 239869152 239870993 239870060 N NA NA LOC151171,TRAF3IP1,FLJ43879,MIR4786,TWIST2,HDAC4 IMR90 Hi-C 24141950 TWIST2 112479 297 chr2 28600350 28602281 28601074 Y RBKS,BRE,BRE,PPP1CB,PPP1CB,FOSL2 FOSL2 RBKS,BRE,GPN1,CCDC121,SLC4A1AP,MRPL33,LOC100505716,FOSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOSL2 13498 298 chr2 43300922 43304141 43302305 Y NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 149604 299 chr2 43384555 43386994 43385872 N NA NA THADA,LOC100129726,ZFP36L2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 66751 300 chr2 48337738 48339670 48338828 N NA NA FOXN2,FBXO11,PPP1R21,STON1-GTF2A1L,MSH6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXN2 202125 301 chr2 61989673 61992616 61991282 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCT4 123190 302 chr2 62804367 62807492 62805810 N NA NA EHBP1 IMR90 Hi-C 24141950 TMEM17 70763 303 chr2 65662194 65664480 65663380 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 2538 304 chr2 65793950 65795319 65794312 N NA NA ACTR2,SPRED2 IMR90 Hi-C 24141950 SPRED2 134294 305 chr2 70607927 70610102 70609098 Y TGFA NA NA NA NA NA FAM136A 78707 306 chr2 70796320 70798576 70797150 N NA TGFA TGFA IMR90 Hi-C 24141950 TGFA 15173 307 chr2 70822649 70824997 70823955 Y TGFA TGFA NA NA NA NA TGFA 41502 308 chr2 85170993 85175196 85173795 Y TMSB10 TMSB10,KCMF1 KCMF1,TMSB10 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KCMF1 23035 309 chr2 85183020 85187329 85186376 N NA KCMF1 TMSB10,KCMF1 IMR90 Hi-C 24141950 KCMF1 10902 310 chr2 85644018 85647476 85645943 N NA CAPG ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 CAPG 2821 311 chr2 91785917 91788228 91786721 Y NA NA LOC654342 IMR90 Hi-C 24141950 LOC654342 59747 312 chr2 9210370 9212774 9211426 N NA NA MBOAT2,ASAP2,ITGB1BP1,CPSF3,KIDINS220 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MBOAT2 66494 313 chr2 9318644 9320795 9320162 N NA ASAP2 ASAP2,CPSF3,ITGB1BP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ASAP2 26099 314 chr2 9940118 9943375 9941650 N NA TAF1B YWHAQ,KLF11,CYS1,TAF1B,ADAM17,ODC1,RRM2,GRHL1,HPCAL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 40196 315 chr20 11830113 11832745 11831817 N NA BTBD3 NA NA NA NA BTBD3 38732 316 chr20 1479405 1483071 1480698 N NA NSFL1C NA NA NA NA NSFL1C 31068 317 chr20 1698410 1701729 1699849 N NA NA PDYN IMR90 Hi-C 24141950 SIRPA 173084 318 chr20 17828469 17831704 17830862 N NA NA BANF2,BFSP1,RRBP1,DSTN,SNX5 IMR90 Hi-C 24141950 SNX5 117786 319 chr20 18205006 18207245 18205807 N NA NA NA NA NA NA ZNF133 61876 320 chr20 22742597 22744830 22743824 N NA NA THBD,NXT1,NAPB IMR90 Hi-C 24141950 THBD 285471 321 chr20 23073858 23077470 23075772 Y THBD,CD93,GZF1 THBD CD93,SSTR4,LOC200261 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 THBD 43557 322 chr20 23126894 23130197 23128766 N NA NA CD93,THBD K562 ChIA-PET 22265404 THBD 96593 323 chr20 23137492 23144003 23138076,23142010 N,N NA;NA NA NA NA NA NA THBD 107191 324 chr20 30182929 30187225 30184028 Y ID1 ID1 HM13 MCF7 ChIA-PET 22265404 ID1 5861 325 chr20 34672360 34675183 34673830 N NA LOC647979,EPB41L1 LOC647979,EPB41L1,PHF20,C20orf152,SCAND1,C20orf4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPB41L1 25165 326 chr20 39632558 39633683 39632882 N NA TOP1 PLCG1,TOP1,ZHX3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 23779 327 chr20 39957338 39958821 39958300 Y NA ZHX3,LPIN3 PLCG1,ZHX3,LPIN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LPIN3 10739 328 chr20 43320583 43323270 43321824 Y WISP2,KCNK15 ADA,WISP2 LOC100505783,HNF4A,TTPAL,PKIG,ADA,LOC79015,RIMS4,KCNK15,WISP2,YWHAB,SERINC3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 WISP2 20615 329 chr20 45987574 45990879 45989420 Y SULF2 LOC100131496,ZMYND8 ZMYND8,LOC100131496,NCOA3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 2100 330 chr20 49042397 49045610 49044806 N NA NA LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C IMR90 Hi-C 24141950 PTPN1 81281 331 chr20 49054368 49059057 49056832 N NA NA LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 67834 332 chr20 5040995 5043137 5042103 Y PRNP,PRNP,SLC23A2 NA SLC23A2,C20orf30,RASSF2,PCNA-AS1,PCNA IMR90 Hi-C 24141950 C20orf30 50596 333 chr20 52239514 52241517 52240278 Y ZNF217 ZNF217 SUMO1P1,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 39878 334 chr20 52444523 52447196 52445441 Y NA NA ZNF217,SUMO1P1,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 244887 335 chr21 16595343 16597704 16596872 Y NRIP1 NA NRIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NRIP1 158217 336 chr21 30004101 30007813 30005984 N NA NA ADAMTS1,LINC00161 IMR90 Hi-C 24141950 N6AMT1 249880 337 chr21 44781053 44782092 44781472 N NA NA HSF2BP,SIK1,LINC00319 IMR90 Hi-C 24141950 SIK1 64910 338 chr21 44912492 44915748 44914261 N NA LINC00313 CRYAA,SIK1,HSF2BP,RRP1B,LINC00313 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00313 14389 339 chr21 44920563 44924385 44922635 N NA LINC00313 SIK1,HSF2BP,LINC00313 MCF7 ChIA-PET 22265404 LINC00313 22460 340 chr22 25380830 25383297 25381861 Y NA KIAA1671 KIAA1671 IMR90 Hi-C 24141950 KIAA1671 40644 341 chr22 27872299 27873739 27872871 Y NA NA PITPNB,TTC28,TTC28-AS1,MN1,MIAT IMR90 Hi-C 24141950 PITPNB 441516 342 chr22 32041765 32043636 32043109 N NA PISD NA NA NA NA PISD 14955 343 chr22 36805064 36807633 36806248 Y NA MYH9 MYH9,FOXRED2,TXN2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYH9 21001 344 chr22 41046423 41049440 41047879 Y NA MKL1 ST13,MKL1,MCHR1,ADSL,SLC25A17,DNAJB7,XPNPEP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 13733 345 chr22 41416106 41420124 41417949 N NA NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EP300 68490 346 chr22 44755921 44757945 44757122 Y NA NA KIAA1644,PARVB,LINC00207,SAMM50,LINC00229 IMR90 Hi-C 24141950 LDOC1L 136060 347 chr22 47149468 47151550 47150523 Y CERK,TBC1D22A CERK,TBC1D22A CERK MCF7 ChIA-PET 22265404 TBC1D22A 6968 348 chr3 107148344 107152301 107150592 N NA NA LOC344595,BBX,LOC100302640 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BBX 89482 349 chr3 128397942 128401753 128399725 N NA RPN1,RAB7A RAB7A,RPN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPN1 28223 350 chr3 131852424 131855875 131855032 Y NA NA CPNE4 IMR90 Hi-C 24141950 DNAJC13 280678 351 chr3 134049079 134053001 134050720 N NA AMOTL2 NA NA NA NA AMOTL2 40405 352 chr3 148942245 148943939 148943196 Y NA NA NA NA NA NA HPS3 94874 353 chr3 150088067 150089087 150088337 N NA TSC22D2 TSC22D2,LOC646903,RNF13,PFN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 37701 354 chr3 154687703 154690588 154689759 N NA NA LOC100507537,MME IMR90 Hi-C 24141950 MME 106848 355 chr3 156891512 156896044 156892863 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 13030 356 chr3 172466513 172469825 172468337 N NA NCEH1,ECT2 NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 2473 357 chr3 174158044 174161887 174159244 N NA NA NAALADL2 IMR90 Hi-C 24141950 ECT2 1685746 358 chr3 177308469 177309353 177309217 Y NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 393421 359 chr3 177313689 177316538 177314652 N NA NA TBL1XR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 398641 360 chr3 177544415 177546839 177545579 N NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 629367 361 chr3 188662862 188667626 188665688 N NA NA LPP-AS2,LPP,BCL6 IMR90 Hi-C 24141950 LPP-AS2 790986 362 chr3 189070483 189074419 189071569 N NA NA TP63,TPRG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLDN1 965816 363 chr3 189305208 189307723 189306367 N NA NA NA NA NA NA CLDN1 732512 364 chr3 195360943 195367746 195361867 N NA SDHAP2 NA NA NA NA SDHAP2 17164 365 chr3 5058192 5060964 5059771 Y ARL8B,BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 37095 366 chr3 57963765 57965302 57963902 N NA FLNB ARF4,FLNB IMR90 Hi-C 24141950 FLNB 28825 367 chr3 57984249 57986263 57985076 N NA FLNB ARF4,FLNB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FLNB 7864 368 chr3 69589702 69591508 69590614 N NA NA NA NA NA NA FRMD4B 154272 369 chr3 97540254 97541793 97540811 N NA NA GABRR3,CPOX IMR90 Hi-C 24141950 MINA 149502 370 chr4 123072375 123075675 123073601 N NA NA KIAA1109 K562 ChIA-PET 22265404 BBS7 280723 371 chr4 13706589 13708887 13707289 N NA NA LOC441009,CPEB2 IMR90 Hi-C 24141950 BOD1L 77261 372 chr4 157396783 157399381 157397749 Y NA NA GRIA2,PDGFC,GLRB IMR90 Hi-C 24141950 PDGFC 493165 373 chr4 159292915 159297163 159295113 N NA NA NA NA NA NA TMEM144 161514 374 chr4 159378567 159381100 159379844 N NA NA NA NA NA NA C4orf46 212102 375 chr4 161239624 161241474 161240875 N NA NA NA NA NA NA RAPGEF2 1050626 376 chr4 185456049 185459766 185458764 N NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 60323 377 chr4 187648403 187650809 187650212 N NA FAT1 FAT1 MCF7 ChIA-PET 22265404 FAT1 3416 378 chr4 187685685 187687842 187686511 N NA FAT1 LOC339975 IMR90 Hi-C 24141950 FAT1 40698 379 chr4 188048768 188051939 188049701 N NA NA LOC339975,FAT1 IMR90 Hi-C 24141950 FAT1 403781 380 chr4 190969339 190971716 190970917 N NA NA NA NA NA NA FRG1 107365 381 chr4 74568858 74571886 74570445 Y ANKRD17,MTHFD2L,IL8,CXCL3,CXCL2 IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 34337 382 chr4 74572691 74575201 74573648 N NA IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 31022 383 chr4 74973645 74977648 74975278 Y IL8,CXCL3,CXCL2,EREG,MTHFD2L CXCL2,MTHFD2L RASSF6 IMR90 Hi-C 24141950 CXCL2 8648 384 chr4 75556340 75559599 75557299 N NA NA EREG,MTHFD2L IMR90 Hi-C 24141950 AREG 75711 385 chr5 129863419 129867671 129865911 N NA NA NA NA NA NA HINT1 633363 386 chr5 133364153 133365687 133365102 N NA VDAC1 TCF7,VDAC1,SKP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 VDAC1 23329 387 chr5 133800872 133803870 133801985 N NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 53274 388 chr5 133838619 133840347 133839136 N NA PHF15 PHF15,UBE2B,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF15 21451 389 chr5 133845626 133848694 133847362 N NA PHF15 PHF15,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B,UBE2B,SKP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF15 13104 390 chr5 135341459 135344163 135342659 Y TGFBI TGFBI TGFBI,VTRNA2-1,FBXL21 IMR90 Hi-C 24141950 TGFBI 20421 391 chr5 139484798 139490498 139487285 N NA PURA,IGIP CYSTM1,NRG2,PSD2,IGIP IMR90 Hi-C 24141950 PURA 3210 392 chr5 148290534 148295786 148294046,148290769 N,N NA;NA NA SH3TC2,ADRB2,ABLIM3,AFAP1L1 IMR90 Hi-C 24141950 ADRB2 84378 393 chr5 148504995 148510854 148506223,148509964 N,N NA;NA ABLIM3 ADRB2,AFAP1L1,ABLIM3,SH3TC2,PCYOX1L IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABLIM3 10200 394 chr5 148512636 148516694 148514773 N NA ABLIM3 AFAP1L1,SH3TC2,ABLIM3,ADRB2 IMR90 Hi-C 24141950 ABLIM3 4360 395 chr5 148940807 148942003 148941534 N NA CSNK1A1,ARHGEF37 AFAP1L1,GRPEL2,MIR143HG,IL17B,PCYOX1L,CSNK1A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CSNK1A1 9800 396 chr5 150966453 150971595 150969974 N NA FAT2 SLC36A2,FAT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAT2 17948 397 chr5 150993697 151001233 150995082,150998997 N,N NA;NA FAT2 FAT2,ATOX1,SLC36A1,SLC36A2 IMR90 Hi-C 24141950 FAT2 45192 398 chr5 151006073 151009293 151008088 N NA NA FAT2,ATOX1,SLC36A2,SLC36A1,SLC36A3 IMR90 Hi-C 24141950 FAT2 57568 399 chr5 159591552 159593479 159592622 Y NA PWWP2A TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PWWP2A 45100 400 chr5 172159316 172161555 172160730 Y ATP6V0E1 DUSP1 ERGIC1,ATP6V0E1,C5orf41,DUSP1,NEURL1B,BNIP1,LOC100268168,RPL26L1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP1 36648 401 chr5 172201372 172204118 172202683 Y UBTD2,ERGIC1,C5orf41,DUSP1 DUSP1 NA NA NA NA DUSP1 3169 402 chr5 34585429 34587630 34586470 Y NA NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 68803 403 chr5 57111475 57113663 57112800 N NA NA PLK2 IMR90 Hi-C 24141950 GPBP1 641700 404 chr5 57130487 57132706 57131178 N NA NA PLK2 IMR90 Hi-C 24141950 PLK2 623260 405 chr5 57136546 57138927 57137634 Y NA NA PLK2 IMR90 Hi-C 24141950 PLK2 617039 406 chr5 66550779 66555127 66553484 Y NA NA PIK3R1 IMR90 Hi-C 24141950 MAST4 658603 407 chr5 66563113 66566304 66564388 N NA NA PIK3R1 IMR90 Hi-C 24141950 MAST4 670937 408 chr5 66595788 66598654 66597335 Y NA NA PIK3R1 IMR90 Hi-C 24141950 MAST4 703612 409 chr5 71683636 71685426 71684286 N NA NA PTCD2,ZNF366,TNPO1,MRPS27 IMR90 Hi-C 24141950 PTCD2 67436 410 chr5 71894533 71898142 71895919 N NA NA TNPO1,ZNF366,PTCD2 IMR90 Hi-C 24141950 TNPO1 214276 411 chr5 81700198 81704061 81701619 Y NA NA VCAN,ATP6AP1L IMR90 Hi-C 24141950 RPS23 125963 412 chr5 90575005 90578248 90576144 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 97916 413 chr5 90606138 90609041 90608153 N NA NA GPR98,ARRDC3,LOC100129716 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 67123 414 chr5 99387874 99390179 99388549 Y NA NA NA NA NA NA LOC100289230 1123036 415 chr6 10450685 10453500 10452218 N NA LOC100130275,TFAP2A,LINC00518 NA NA NA NA LINC00518 15630 416 chr6 105906089 105909091 105907569 N NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 55090 417 chr6 106047970 106049294 106048547 N NA NA PRDM1,ATG5 IMR90 Hi-C 24141950 PREP 196971 418 chr6 106829137 106830679 106829677 N NA NA NA NA NA NA ATG5 55442 419 chr6 117761131 117764605 117763038 N NA ROS1,DCBLD1 DCBLD1,GOPC,ROS1 IMR90 Hi-C 24141950 ROS1 14113 420 chr6 12323853 12326199 12324584 Y NA EDN1 EDN1 MCF7 ChIA-PET 22265404 EDN1 33324 421 chr6 1286246 1288358 1287677 N NA FOXQ1 EXOC2,LOC285768 IMR90 Hi-C 24141950 FOXQ1 24317 422 chr6 138131693 138133915 138132861 Y TNFAIP3 NA TNFAIP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 54666 423 chr6 138351685 138354497 138353081 N NA NA KIAA1244,PERP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PERP 74163 424 chr6 143716823 143719761 143718076 N NA NA AIG1 IMR90 Hi-C 24141950 ADAT2 52080 425 chr6 143720762 143723716 143722061 N NA ADAT2,PEX3 AIG1 IMR90 Hi-C 24141950 ADAT2 48125 426 chr6 144584842 144586843 144585620 Y NA NA UTRN,STX11 IMR90 Hi-C 24141950 ZC2HC1B 399269 427 chr6 144606719 144608595 144608043 N NA NA UTRN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZC2HC1B 421146 428 chr6 14733579 14735598 14734465 N NA NA DTNBP1,JARID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 510929 429 chr6 14741681 14745400 14744017 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 501127 430 chr6 1480822 1483292 1481821 N NA NA C6orf195,EXOC2,LOC285768,MYLK4 IMR90 Hi-C 24141950 FOXF2 90753 431 chr6 157007178 157009777 157008199 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 89287 432 chr6 157041477 157043047 157042691 N NA NA ARID1B,MIR4466 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ARID1B 56017 433 chr6 25002330 25008898 25006868 Y TDP2,C6orf62 NA FAM65B IMR90 Hi-C 24141950 FAM65B 91135 434 chr6 25016011 25019268 25018016 N NA NA FAM65B IMR90 Hi-C 24141950 FAM65B 104816 435 chr6 25193155 25194610 25193224 N NA NA FAM65B IMR90 Hi-C 24141950 LRRC16A 85046 436 chr6 30719217 30721396 30720189 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3 MDC1,TUBB,FLOT1,IER3 DPCR1,NRM,PPP1R18,MDC1,FLOT1,IER3,C6orf136,DHX16,DDR1,VARS2,SFTA2,CCHCR1,PSORS1C1,PSORS1C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER3 6890 437 chr6 33791540 33793499 33792387 Y CUTA,C6orf1 LEMD2 IP6K3,GRM4,RPS10-NUDT3,C6orf106,LEMD2,LOC100507584,MIR1275 IMR90 Hi-C 24141950 LEMD2 34634 438 chr6 3825575 3827434 3826553 N NA FAM50B SLC22A23,TUBB2B IMR90 Hi-C 24141950 FAM50B 22198 439 chr6 42748685 42750575 42749138 N NA TBCC,KIAA0240 KIAA0240,UBR2,RPL7L1,PTCRA,KLHDC3,MEA1,PPP2R5D,PRPH2,TBCC,ATP6V0CP3,C6orf226 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBCC 34801 440 chr6 44001968 44004739 44003015 Y NFKBIE NA RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA IMR90 Hi-C 24141950 MRPL14 90452 441 chr6 44007885 44012270 44010342 N NA NA RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA IMR90 Hi-C 24141950 MRPL14 82921 442 chr6 44023809 44028727 44026892,44025315 Y,Y NFKBIE,MAD2L1BP;NFKBIE,MAD2L1BP NA RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223,XPO5,MRPL14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL14 66464 443 chr6 45750302 45752517 45751636 N NA NA SUPT3H IMR90 Hi-C 24141950 SLC25A27 868135 444 chr6 53329976 53331560 53330730 N NA NA GCM1 IMR90 Hi-C 24141950 GCLC 78367 445 chr6 53478190 53482938 53481127 N NA NA KLHL31,GCLC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GCLC 68263 446 chr6 6686571 6689942 6687356 Y NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 417888 447 chr6 6695192 6696616 6695470 N NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 411214 448 chr6 6802633 6805241 6803951 Y RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 302589 449 chr6 7057988 7059611 7058821 Y DSP RREB1 RREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RREB1 48219 450 chr6 78001141 78004155 78002884 N NA NA NA NA NA NA MYO6 1542232 451 chr6 81249346 81255200 81253707,81251532 Y,N NA;NA NA FAM46A,BCKDHB IMR90 Hi-C 24141950 TTK 535024 452 chr6 83106032 83107752 83107403 N NA NA TPBG IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IBTK 148584 453 chr6 83118941 83122341 83119463 N NA NA TPBG,UBE3D IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IBTK 161493 454 chr6 86111570 86115881 86113996 N NA NT5E NT5E,SNX14 IMR90 Hi-C 24141950 NT5E 43421 455 chr6 861747 863875 862751 N NA NA FOXF2 IMR90 Hi-C 24141950 EXOC2 168638 456 chr7 100433159 100435554 100434751 N NA EPHB4,SLC12A9,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHB4 8016 457 chr7 105704484 105707646 105706146 N NA SYPL1 ATXN7L1,SYPL1,CDHR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SYPL1 45411 458 chr7 109284062 109287745 109286015 N NA NA NA NA NA NA DNAJB9 1073873 459 chr7 113275957 113278669 113277254 N NA NA NA NA NA NA LOC401397 517320 460 chr7 115954086 115956788 115955598 Y NA NA CAV1,CAV2,TES,CAPZA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TES 103539 461 chr7 115993718 115996708 115995406 Y CAV2,CAV2,CAV1,CAV1,CAV1,CAV1 NA CAV2,CAV1,TES,MET,ST7,ST7-AS2 IMR90,H1ESC,GM12878,HELA,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 CAV2 142947 462 chr7 12754381 12756542 12755343 Y VWDE,ARL4A ARL4A NA NA NA NA ARL4A 27929 463 chr7 130528228 130539729 130538592,130530560 N,N NA;NA NA MEST,KLHDC10,MIR29A,MIR29B1,ZC3HC1,C7orf45,CPA5,LOC646329 IMR90 Hi-C 24141950 LOC646329 58340 464 chr7 148636589 148639266 148638415 Y NA NA EZH2,CUL1,ZNF786,ZNF398,ZNF425 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EZH2 55148 465 chr7 19598937 19602410 19600188 N NA NA NA NA NA NA TWISTNB 146250 466 chr7 47639749 47642806 47641164 Y NA TNS3 TNS3,C7orf65,LINC00525,PKD1L1,C7orf69 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNS3 18007 467 chr7 54895876 54900602 54899378 N NA NA EGFR,LANCL2 IMR90 Hi-C 24141950 SEC61G 68937 468 chr7 5594049 5597707 5595464 N NA FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 23817 469 chr7 65957678 65960199 65958626 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 83299 470 chr7 66055192 66058224 66057390 N NA LOC493754,KCTD7 KCTD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC493754 11694 471 chr7 66145733 66151934 66146822 N NA NA KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 KCTD7 51865 472 chr7 87729 90085 88992 N NA NA FAM20C,HEATR2 IMR90 Hi-C 24141950 FAM20C 102884 473 chr7 90223517 90225112 90224532 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CDK14 113600 474 chr7 92532597 92535213 92533812 Y SAMD9 NA FAM133B IMR90 Hi-C 24141950 CDK6 66656 475 chr8 102289527 102291493 102290455 N NA NA YWHAZ,FLJ42969,PABPC1,ZNF706 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF706 71567 476 chr8 11331670 11333275 11332017 N NA FAM167A C8orf12,BLK IMR90 Hi-C 24141950 FAM167A 7394 477 chr8 128225948 128237577 128237148,128234844,128227879 N,N,N NA;NA;NA NA LOC727677,MYC,PVT1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 POU5F1B 190280 478 chr8 128264990 128266901 128265941 Y NA NA PVT1 IMR90 Hi-C 24141950 POU5F1B 160956 479 chr8 128302680 128309186 128306762 N NA NA LOC727677 IMR90 Hi-C 24141950 POU5F1B 118671 480 chr8 128341953 128345705 128342821,128344579 N,Y NA;NA NA LOC727677 IMR90 Hi-C 24141950 POU5F1B 82152 481 chr8 128401528 128405484 128403787 Y MYC POU5F1B NA NA NA NA POU5F1B 22373 482 chr8 128406491 128415442 128413360,128410817,128408136 N,N,Y NA;NA;NA POU5F1B LOC727677 IMR90 Hi-C 24141950 POU5F1B 12415 483 chr8 128672282 128682815 128673732,128682013 N,N NA;NA NA MYC,PVT1 MCF7 ChIA-PET 22265404 MYC 65500 484 chr8 129138765 129141172 129139900 N NA NA PVT1 IMR90 Hi-C 24141950 PVT1 331986 485 chr8 141473487 141476037 141474922 Y NA CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 CHRAC1 45360 486 chr8 1702988 1704597 1703956 N NA CLN8 NA NA NA NA CLN8 7273 487 chr8 24859935 24862147 24861091 N NA NA NA NA NA NA DOCK5 180140 488 chr8 26122958 26125210 26123513 Y NA PPP2R2A PPP2R2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2R2A 23797 489 chr8 29385398 29389287 29387084 N NA NA C8orf75,DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 177131 490 chr8 29411949 29415826 29413441 N NA NA DUSP4,LOC286135,C8orf75,MIR3148,MIR548O2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 203682 491 chr8 29447573 29450358 29449035 N NA NA LOC286135,DUSP4,C8orf75 IMR90 Hi-C 24141950 DUSP4 239306 492 chr8 29517239 29523810 29522906 Y KIF13B NA DUSP4,MIR3148,C8orf75,LOC286135,MIR548O2,TMEM66 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 308972 493 chr8 29524924 29528117 29526024 N NA NA LOC286135,DUSP4,C8orf75 IMR90 Hi-C 24141950 DUSP4 316657 494 chr8 41179140 41182741 41181650 N NA SFRP1 SFRP1 IMR90 Hi-C 24141950 SFRP1 12150 495 chr8 49230047 49234535 49231157 N NA NA SNAI2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 UBE2V2 309052 496 chr8 49539762 49543122 49540718 N NA NA SNAI2,EFCAB1 IMR90 Hi-C 24141950 SNAI2 290877 497 chr8 53730791 53732552 53731347 N NA NA NA NA NA NA RB1CC1 103765 498 chr8 61562954 61567919 61565087,61565651 N,N NA;NA CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 23405 499 chr8 62671526 62674099 62672597 N NA ASPH ASPH,MIR4470 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ASPH 44327 500 chr8 79121470 79124413 79122640,79122513 N,N NA;NA NA NA NA NA NA ZC2HC1A 453869 501 chr9 110801571 110805217 110803692 N NA NA KLF4 IMR90 Hi-C 24141950 KLF4 549524 502 chr9 118705555 118707748 118706856 Y NA NA ASTN2,PAPPA,LINC00474 IMR90 Hi-C 24141950 TRIM32 741833 503 chr9 130006220 130008280 130007526 N NA NA NA NA NA NA SLC2A8 151185 504 chr9 132244547 132247511 132246150 N NA LOC100506190 NA NA NA NA LOC100506190 3428 505 chr9 134247441 134249925 134248917 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 55552 506 chr9 139444224 139445851 139445289 N NA NOTCH1 MIR4674,NOTCH1 K562 ChIA-PET 22265404 NOTCH1 3986 507 chr9 19229434 19233169 19230654 N NA NA DENND4C,PLIN2 IMR90 Hi-C 24141950 DENND4C 57580 508 chr9 6680276 6684307 6681445 Y UHRF2,KDM4C NA KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 73334 509 chr9 81640345 81642445 81641428 N NA NA NA NA NA NA PSAT1 728286 510 chr9 93892392 93894778 93893909 Y NA NA LOC100129316,AUH IMR90 Hi-C 24141950 AUH 229428 511 chr9 96896824 96898789 96897794 N NA NA NA NA NA NA PTPDC1 103748 512 chr9 96901364 96903252 96902626 N NA NA NA NA NA NA PTPDC1 108288 513 chrM 2308 16203 16036 N NA NA NA NA NA NA NA -1 514 chrX 122898230 122900015 122899017 Y NA THOC2 NA NA NA NA THOC2 31326 515 chrX 124338538 124340840 124339074 N NA NA NA NA NA NA STAG2 1244063 516 chrX 45626612 45631814 45629874 N NA NA MIR222,MIR221 IMR90 Hi-C 24141950 ZNF673 674810 517 chrX 46182189 46186854 46186015 N NA NA NA NA NA NA ZNF673 119770 518 chrX 48533997 48537338 48534948 N NA SUV39H1 NA NA NA NA SUV39H1 17793 519 chrX 82071037 82073284 82071934 N NA NA NA NA NA NA BRWD3 2005804