Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 101774716 101776445 101775248 Y S1PR1 NA NA NA NA NA S1PR1 72411 2 chr1 101850336 101852345 101851729 N NA NA NA NA NA NA S1PR1 148031 3 chr1 101874080 101877326 101875909 N NA NA NA NA NA NA S1PR1 171775 4 chr1 110448380 110450407 110449029 Y GNAI3,AMPD2 CSF1 NA NA NA NA CSF1 2826 5 chr1 111761528 111763975 111762737 Y CD53,CEPT1,DENND2D,CHI3L2 DENND2D WDR77,C1orf88,CEPT1,PGCP1,RAP1A,DRAM2,CHI3L2 IMR90 Hi-C 24141950 DENND2D 18247 6 chr1 117279120 117281916 117281058 N NA NA CD101,TTF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD58 165405 7 chr1 117369485 117370509 117369901 N NA NA PTGFRN K562 ChIA-PET 22265404 TTF2 232440 8 chr1 117419775 117422962 117421525 N NA NA PTGFRN,TTF2 MCF7 ChIA-PET 22265404 TTF2 179987 9 chr1 118197871 118199624 118199042 Y MAN1A2,GDAP2,FAM46C FAM46C FAM46C K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM46C 49267 10 chr1 118320887 118321649 118321382 N NA NA NA NA NA NA WDR3 150723 11 chr1 12116276 12117189 12116726 N NA MIIP,TNFRSF8 NA NA NA NA TNFRSF8 6245 12 chr1 142618476 142620377 142618785 N NA NA NA NA NA NA LOC100286793 1124210 13 chr1 145139163 145140111 145139927 N NA SEC22B NA NA NA NA SEC22B 42756 14 chr1 146373330 146377136 146373813 N NA NA NA NA NA NA PRKAB2 266993 15 chr1 146555208 146557145 146556441 N NA NA CHD1L,LOC728989,PRKAB2,FMO5 K562,MCF7 ChIA-PET 22265404 PRKAB2 86984 16 chr1 147735221 147736634 147735651 N NA NA NA NA NA NA GPR89B 334715 17 chr1 147805560 147808064 147807000 Y NA NA NA NA NA NA GPR89B 405054 18 chr1 147873903 147876304 147874882 N NA NA NA NA NA NA GPR89B 473397 19 chr1 148176112 148178211 148176341 N NA NA NA NA NA NA NBPF15 379977 20 chr1 148240236 148243110 148241361 N NA NA NA NA NA NA NBPF15 315078 21 chr1 148246788 148248930 148248125 N NA NA NA NA NA NA NBPF15 309258 22 chr1 149512733 149515855 149514347 N NA NA NA NA NA NA FAM91A2 60407 23 chr1 152019480 152021997 152020764 N NA S100A11 THEM4 MCF7 ChIA-PET 22265404 S100A11 9969 24 chr1 156065547 156068453 156067571 N NA UBQLN4,LAMTOR2,LMNA LMNA,MEX3A K562,MCF7 ChIA-PET 22265404 LMNA 16008 25 chr1 15928400 15932167 15930180 N NA AGMAT,DDI2 DDI2,DNAJC16,AGMAT,FBLIM1,PLEKHM2,SLC25A34,TMEM82 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDI2 11786 26 chr1 160750561 160753425 160752163 N NA SLAMF7,LY9 NA NA NA NA LY9 12503 27 chr1 161358471 161361004 161359905 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 74305 28 chr1 161368206 161370502 161369354 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 84040 29 chr1 161413113 161414151 161413786 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 HSPA6 79885 30 chr1 161416414 161419840 161419119 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 HSPA6 74196 31 chr1 161423890 161427221 161426475 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 HSPA6 66815 32 chr1 161431205 161434631 161433885 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 HSPA6 59405 33 chr1 161438585 161442012 161441023 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 HSPA6 52024 34 chr1 165567153 165568193 165567517 N NA MGST3 RXRG,LOC400794,UCK2,LOC440700,ALDH9A1 IMR90 Hi-C 24141950 MGST3 31917 35 chr1 166458913 166459958 166459148 N NA NA NA NA NA NA POGK 348766 36 chr1 168478723 168480396 168479586 N NA NA C1orf114,BLZF1 IMR90 Hi-C 24141950 XCL1 65315 37 chr1 172787157 172789128 172788252 Y NA NA CENPL,DARS2,TNFSF4,LOC100506023,RC3H1,SERPINC1,TNFSF18 IMR90 Hi-C 24141950 C1orf9 284897 38 chr1 173989272 173992206 173991240 N NA RC3H1 ZBTB37,RC3H1,GAS5 IMR90 Hi-C 24141950 RC3H1 27062 39 chr1 181097587 181099038 181098199 Y MR1,IER5 IER5 STX6,ACBD6,MR1 IMR90 Hi-C 24141950 IER5 39949 40 chr1 181103615 181105113 181104274 Y NA IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 45977 41 chr1 181399030 181400105 181399231 N NA NA NA NA NA NA CACNA1E 52581 42 chr1 181997777 181999836 181998858 Y GLUL,GLUL NA ZNF648 MCF7 ChIA-PET 22265404 GLUL 361505 43 chr1 183572723 183574559 183573803 Y NCF2,NCF2,ARPC5 NCF2,ARPC5,RGL1 SMG7,SHCBP1L,NMNAT2,DKFZP564C196,NCF2,RGL1 IMR90 Hi-C 24141950 NCF2 12667 44 chr1 185408515 185408989 185408590 N NA NA IVNS1ABP,LOC100288079 IMR90 Hi-C 24141950 IVNS1ABP 122054 45 chr1 185662473 185664094 185663207 N NA NA IVNS1ABP,SWT1,MIR548F1,HMCN1 IMR90 Hi-C 24141950 IVNS1ABP 376012 46 chr1 192486190 192488645 192486683 N NA NA RGS1 IMR90 Hi-C 24141950 RGS1 56212 47 chr1 192498504 192501585 192499591 N NA RGS1 UCHL5,RGS1 IMR90 Hi-C 24141950 RGS1 43272 48 chr1 192507575 192510073 192508568 N NA RGS1 UCHL5,RGS1 IMR90 Hi-C 24141950 RGS1 34784 49 chr1 192512374 192514821 192514422 N NA RGS1 RGS1 IMR90 Hi-C 24141950 RGS1 30036 50 chr1 192518956 192529549 192520317,192522268,192527916 Y,Y,N RGS2,RGS1;RGS1;NA RGS1 RGS1 IMR90 Hi-C 24141950 RGS1 15308 51 chr1 198589914 198590992 198590562 Y NEK7,PTPRC PTPRC NA NA NA NA PTPRC 17145 52 chr1 201139084 201141379 201140159 N NA TMEM9 KIF21B,IGFN1,LAD1 IMR90 Hi-C 24141950 TMEM9 15452 53 chr1 204462501 204464599 204464102 N NA MDM4 PIK3C2B,PPP1R15B,LOC127841 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MDM4 20908 54 chr1 204475061 204477792 204475964 N NA MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 7715 55 chr1 206963538 206965498 206964436 N NA NA EIF2D,MAPKAPK2,IL10,IL20,IL19 IMR90 Hi-C 24141950 MAPKAPK2 105173 56 chr1 207584607 207587031 207586424 N NA CR2 C4BPA,PFKFB2,C4BPB IMR90 Hi-C 24141950 CR2 40614 57 chr1 207596615 207597926 207597723 N NA CR2 PFKFB2,C4BPA,CR1,CR2 IMR90 Hi-C 24141950 CR2 29719 58 chr1 211871451 211872382 211872110 N NA NA INTS7,LPGAT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC30A1 119352 59 chr1 212359542 212361224 212360259 N NA NA DTL,PPP2R5A IMR90 Hi-C 24141950 PPP2R5A 97655 60 chr1 212730702 212733451 212732110 Y NA NA ATF3 K562,MCF7 ChIA-PET 22265404 NENF 124473 61 chr1 219632908 219640002 219634664,219638681 N,N NA;NA NA RRP15,LOC643723 IMR90 Hi-C 24141950 LYPLAL1 285716 62 chr1 221927338 221929868 221928349 N NA DUSP10 NA NA NA NA DUSP10 11822 63 chr1 221934046 221935822 221935028 N NA DUSP10 DUSP10 K562 ChIA-PET 22265404 DUSP10 18530 64 chr1 221949942 221952207 221950717 N NA DUSP10 DUSP10 IMR90 Hi-C 24141950 DUSP10 34426 65 chr1 221966327 221968166 221967436 N NA NA NA NA NA NA DUSP10 50811 66 chr1 224178973 224183267 224180406 Y NA NA NA NA NA NA FBXO28 118524 67 chr1 226297379 226299357 226298337 N NA H3F3A ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 46971 68 chr1 226308108 226311017 226309994 N NA NA H3F3A,LIN9,ACBD3,MIXL1,C1orf55 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 57700 69 chr1 234907021 234909962 234908296 Y IRF2BP2 LOC100506810 LOC100506810,IRF2BP2,LOC100506795,LINC00184,TOMM20,RBM34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 47232 70 chr1 234976336 234980610 234978870,234980567 Y,Y IRF2BP2;IRF2BP2 NA LINC00184,LOC100506810,IRF2BP2 IMR90 Hi-C 24141950 LOC100506810 116547 71 chr1 235061343 235064332 235062516 N NA NA LINC00184,IRF2BP2,TARBP1,LOC100506795,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 201554 72 chr1 235068449 235070835 235069330 Y IRF2BP2,ARID4B,ARID4B NA LINC00184,IRF2BP2,TARBP1,LOC100506795,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 208660 73 chr1 235089254 235090294 235089793 N NA NA IRF2BP2,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 201962 74 chr1 235096219 235100239 235098466 N NA NA IRF2BP2,LOC100506810,LINC00184,TARBP1,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 192017 75 chr1 235112588 235117924 235115756 N NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 174332 76 chr1 235150270 235152726 235151807 Y IRF2BP2,ARID4B,ARID4B NA LINC00184,TARBP1,LOC100506795,IRF2BP2,LOC100506810 IMR90 Hi-C 24141950 TOMM20 139530 77 chr1 235156594 235160959 235156608,235158947 N,N NA;NA NA IRF2BP2 MCF7 ChIA-PET 22265404 TOMM20 131297 78 chr1 235169452 235172398 235170752 N NA NA LOC100506810,LINC00184,LOC100506795 IMR90 Hi-C 24141950 TOMM20 119858 79 chr1 235182600 235186874 235183968,235186773 Y,Y NA;ARID4B NA LINC00184,LOC100506795,LOC100506810,IRF2BP2 IMR90 Hi-C 24141950 TOMM20 105382 80 chr1 235242099 235243163 235242641 N NA TOMM20 IRF2BP2 MCF7 ChIA-PET 22265404 TOMM20 49093 81 chr1 235245727 235247470 235246876 N NA TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 44786 82 chr1 236260322 236261712 236260506 N NA NID1,GPR137B LGALS8,EDARADD,HEATR1,LGALS8-AS1 IMR90 Hi-C 24141950 NID1 31841 83 chr1 23918553 23919798 23919165 N NA ID3 E2F2,ID3,ASAP3,MDS2,TCEB3,HNRNPR IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID3 32268 84 chr1 23944389 23947921 23946373 N NA NA E2F2,MDS2,ID3,RPL11 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID3 58104 85 chr1 24046442 24049411 24047035 N NA RPL11,TCEB3 RPL11 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TCEB3 20445 86 chr1 244012224 244015080 244013889 N NA NA LOC339529 IMR90 Hi-C 24141950 ZNF238 199481 87 chr1 245081573 245082976 245082274 Y EFCAB2 NA SMYD3,EFCAB2,C1orf101,HNRNPU,PPPDE1,COX20 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 50308 88 chr1 247370535 247374922 247373966 N NA ZNF124 MIR3916,ZNF496 MCF7 ChIA-PET 22265404 ZNF124 35217 89 chr1 25347406 25351759 25349327 N NA NA RUNX3,CLIC4,C1orf63,SYF2 IMR90 Hi-C 24141950 RUNX3 55905 90 chr1 25356219 25362388 25359036 N NA NA RUNX3,C1orf63,SYF2,CLIC4 IMR90 Hi-C 24141950 RUNX3 64718 91 chr1 25592644 25595331 25594135 N NA SYF2,C1orf63 NA NA NA NA C1orf63 18659 92 chr1 26825025 26830095 26827507 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2,RPS6KA1 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 26123 93 chr1 26946280 26949014 26947778 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73508 94 chr1 31069101 31072168 31070571 N NA NA NA NA NA NA LOC100129196 119451 95 chr1 31241169 31243329 31242152 Y LAPTM5 LOC100129196,MATN1,LAPTM5 PUM1,SNORD103A,LAPTM5,MATN1,LOC100129196,SDC3,MECR,SNORD103B IMR90 Hi-C 24141950 LAPTM5 10486 96 chr1 31949655 31952045 31950235 Y NA LOC149086 SERINC2,SNRNP40,HCRTR1,NKAIN1,FABP3,LOC149086,LOC284551,TINAGL1 IMR90 Hi-C 24141950 LOC149086 19794 97 chr1 31955358 31956798 31955764 N NA LOC149086 SERINC2,SNRNP40,HCRTR1,NKAIN1,FABP3,LOC149086,LOC284551,TINAGL1 IMR90 Hi-C 24141950 LOC149086 15041 98 chr1 32409239 32411869 32410097 N NA PTP4A2 KHDRBS1,SPOCD1 IMR90 Hi-C 24141950 PTP4A2 5251 99 chr1 38939736 38943545 38941270 N NA NA NA NA NA NA RRAGC 381795 100 chr1 39024591 39026048 39025098 N NA NA NA NA NA NA RRAGC 299292 101 chr1 40264258 40266128 40265087 Y NA BMP8B HEYL,PPIE,BMP8B,MFSD2A,MACF1,NT5C1A,TRIT1,MYCL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 BMP8B 9725 102 chr1 40281374 40284527 40283018 N NA BMP8B MYCL1 K562 ChIA-PET 22265404 BMP8B 26841 103 chr1 4691003 4692725 4691405 N NA NA NPHP4 IMR90 Hi-C 24141950 LOC100133612 874035 104 chr1 564350 570423 566443,569804 N,N NA;NA NA NA NA NA NA LOC643837 192641 105 chr1 59434146 59434368 59434358 N NA NA FGGY,LOC100131060,JUN,MIR4711 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 JUN 184361 106 chr1 59478482 59479788 59479334 N NA NA FGGY,LOC100131060,JUN,HSD52,MIR4711 IMR90 Hi-C 24141950 JUN 228697 107 chr1 59485436 59486794 59486008 N NA NA FGGY,LOC100131060,JUN,HSD52,MIR4711 IMR90 Hi-C 24141950 JUN 235651 108 chr1 65531680 65534627 65533041 N NA NA AK4,DNAJC6,LEPR,JAK1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 AK4 78605 109 chr1 66865277 66869540 66866971 N NA NA PDE4B IMR90 Hi-C 24141950 MIER1 521038 110 chr1 8013608 8015370 8014332 N NA TNFRSF9,PARK7 NA NA NA NA PARK7 6344 111 chr1 8157099 8158541 8157535 Y NA NA ERRFI1,RERE,SLC45A1,PARK7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 70706 112 chr1 87915104 87916170 87915498 Y NA NA NA NA NA NA LMO4 120953 113 chr1 9236214 9246507 9242257 N NA GPR157,H6PD SLC2A7,SLC25A33,GPR157,MIR34A,H6PD,SPSB1,TMEM201 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR157 46985 114 chr1 9470753 9475312 9471367,9473434 N,N NA;NA NA SPSB1,H6PD,SLC25A33 IMR90 Hi-C 24141950 SPSB1 117812 115 chr1 9487350 9490136 9488857 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 109392 116 chr10 112114220 112119048 112116371 Y DUSP5,MXI1 SMNDC1 SMC3,DUSP5,SMNDC1,RBM20 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMNDC1 49513 117 chr10 112147515 112149167 112147975 N NA NA SMC3,DUSP5 IMR90 Hi-C 24141950 SMNDC1 82808 118 chr10 11725018 11727682 11727041,11725902 N,N NA;NA NA USP6NL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECHDC3 56674 119 chr10 121460615 121470212 121464635,121462292,121468390 N,N,N NA;NA;NA BAG3,INPP5F INPP5F,MCMBP,SEC23IP IMR90 Hi-C 24141950 INPP5F 15347 120 chr10 125148634 125152702 125151260 N NA NA NA NA NA NA BUB3 234874 121 chr10 125161192 125163364 125162325 Y NA NA NA NA NA NA BUB3 247432 122 chr10 126604093 126610777 126605383 N NA ZRANB1 ZRANB1,CTBP2,METTL10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZRANB1 19915 123 chr10 135523354 135524509 135523830 N NA DUX4L2,DUX2 NA NA NA NA DUX2 29694 124 chr10 22517791 22518779 22518395 N NA LOC100130992 COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 22222 125 chr10 26718905 26721010 26719459 N NA APBB1IP NA NA NA NA APBB1IP 6256 126 chr10 30818038 30819391 30818656 Y MAP3K8,ZNF438 NA MAP3K8,KIAA1462,MTPAP,LOC729668,LYZL2 IMR90 Hi-C 24141950 MAP3K8 95088 127 chr10 32047849 32050843 32049190 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166927 128 chr10 32733976 32736540 32735023 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 97863 129 chr10 3846410 3850678 3848141 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 18937 130 chr10 3910543 3912798 3911505 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 83070 131 chr10 3915325 3917980 3916787 N NA NA LOC100216001,LOC338588,KLF6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 87852 132 chr10 3944263 3946062 3945021 N NA NA LOC100216001,LOC338588,KLF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 116790 133 chr10 43857073 43859083 43857817 N NA HNRNPF FXYD4,HNRNPF,ZNF487P MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HNRNPF 45613 134 chr10 43915149 43916881 43916270 N NA HNRNPF,ZNF487P ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 10453 135 chr10 44503603 44505050 44504320 N NA NA TMEM72-AS1,LOC100506835,C10orf136,LOC283033,CXCL12 IMR90 Hi-C 24141950 ZNF32 359277 136 chr10 49486680 49488614 49487495 N NA NA NA NA NA NA WDFY4 404904 137 chr10 49493269 49497378 49493954,49496241 N,N NA;NA NA FRMPD2 MCF7 ChIA-PET 22265404 WDFY4 396140 138 chr10 49878917 49882234 49880109 N NA WDFY4 ARHGAP22,WDFY4,C10orf71,ERCC6 IMR90 Hi-C 24141950 WDFY4 11284 139 chr10 6113761 6115424 6114643 Y IL2RA,RBM17,RBM17 IL2RA,RBM17 IL2RA,LOC399715,RBM17 IMR90 Hi-C 24141950 IL2RA 9428 140 chr10 64491881 64494841 64492996 Y NRBF2,EGR2,EGR2 NA EGR2,ZNF365,JMJD1C IMR90 Hi-C 24141950 ADO 69675 141 chr10 64630285 64631840 64630889 N NA NA ZNF365,NRBF2 IMR90 Hi-C 24141950 EGR2 51358 142 chr10 69523675 69524482 69524222 Y NA NA NA NA NA NA SIRT1 119945 143 chr10 69608950 69610903 69609438 N NA SIRT1 SIRT1 K562 ChIA-PET 22265404 SIRT1 33524 144 chr10 70804624 70806498 70805410 Y DDX21,VPS26A,SRGN SRGN DDX21,KIAA1279,VPS26A,SRGN,HKDC1 IMR90 Hi-C 24141950 SRGN 41330 145 chr10 70812427 70814733 70813688 N NA SRGN KIAA1279,SRGN,DDX21,VPS26A,SUPV3L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SRGN 33095 146 chr10 73648253 73649836 73648749 N NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 37171 147 chr10 74020101 74021941 74020866 Y C10orf54,PSAP,DNAJB12,DDIT4 ANAPC16,ASCC1,DDIT4 DNAJB12 K562 ChIA-PET 22265404 DDIT4 11736 148 chr10 7512964 7514975 7514140 N NA NA NA NA NA NA SFMBT2 59516 149 chr10 82006890 82007626 82007536 N NA ANXA11 NA NA NA NA ANXA11 41562 150 chr10 88152142 88153573 88152573 N NA NA NA NA NA NA WAPAL 127968 151 chr10 88159457 88163572 88160256 Y NA NA WAPAL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 WAPAL 117969 152 chr10 89823698 89828239 89824752,89826804 Y,Y KLLN,PTEN;KLLN,PTEN NA PTEN,RNLS,KLLN IMR90 Hi-C 24141950 PTEN 200503 153 chr10 89863908 89864928 89864307 N NA NA PTEN,KLLN,RNLS IMR90 Hi-C 24141950 PTEN 240713 154 chr10 89867521 89868532 89867946 N NA NA PTEN,KLLN,RNLS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTEN 244326 155 chr10 89869943 89874229 89870785,89873520 N,N NA;NA NA PTEN,KLLN,RNLS,CFL1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTEN 246748 156 chr10 92757470 92761253 92758985 N NA NA ANKRD1,PCGF5 IMR90 Hi-C 24141950 RPP30 125761 157 chr10 92765487 92768875 92765738 N NA NA PCGF5,ANKRD1,RPP30 IMR90 Hi-C 24141950 RPP30 133778 158 chr10 92920998 92925434 92923220 N NA NA ANKRD1,PCGF5,RPP30,NUDT9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PCGF5 54474 159 chr10 94501896 94503631 94502266 N NA NA IDE,KIF11,HHEX,EXOC6 IMR90 Hi-C 24141950 HHEX 52215 160 chr10 94515307 94518344 94516922 Y HHEX,EXOC6 NA EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 65626 161 chr10 96942981 96944523 96943605 Y SORBS1,SORBS1 NA SORBS1,C10orf129 IMR90 Hi-C 24141950 PDLIM1 106258 162 chr10 975591 980379 976967 N NA LARP4B DIP2C,LARP4B,GTPBP4,IDI1,IDI2-AS1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LARP4B 43889 163 chr11 10921235 10922005 10921597 N NA ZBED5 NA NA NA NA ZBED5 41615 164 chr11 109815618 109818886 109817078 N NA NA DDX10,ZC3H12C,FDX1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZC3H12C 145201 165 chr11 109892262 109894630 109893511 N NA NA ZC3H12C K562 ChIA-PET 22265404 ZC3H12C 69457 166 chr11 109896782 109899397 109898365 N NA NA ZC3H12C IMR90 Hi-C 24141950 ZC3H12C 64690 167 chr11 110219087 110221873 110220055 N NA NA C11orf53,RDX IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RDX 51650 168 chr11 111047978 111049031 111048141 N NA NA ARHGAP20,C11orf53 IMR90 Hi-C 24141950 C11orf92 121508 169 chr11 112497563 112499285 112498592 N NA NA NCAM1,TTC12,LOC100288346 IMR90 Hi-C 24141950 PTS 400475 170 chr11 115788988 115794052 115790248,115792503 N,N NA;NA NA CADM1,LOC283143 IMR90 Hi-C 24141950 BUD13 849662 171 chr11 115944185 115945686 115944971 N NA NA CADM1 IMR90 Hi-C 24141950 BUD13 698028 172 chr11 121107975 121109357 121108577 N NA NA SORL1 IMR90 Hi-C 24141950 SC5DL 54031 173 chr11 123228612 123230339 123229114 N NA NA GRAMD1B,MIR4493 IMR90 Hi-C 24141950 GRAMD1B 166189 174 chr11 123300034 123302055 123301564 N NA NA CLMP IMR90 Hi-C 24141950 GRAMD1B 94473 175 chr11 123946001 123947424 123946875 N NA NA VWA5A,OR8G1,OR8D2 IMR90 Hi-C 24141950 ZNF202 333638 176 chr11 124980480 124982421 124981701 N NA SLC37A2,TMEM218 CCDC15,TMEM218,PKNOX2 IMR90 Hi-C 24141950 TMEM218 7275 177 chr11 128160794 128162734 128161853 Y NA NA ETS1,FLI1,LOC100507392 IMR90 Hi-C 24141950 FLI1 401077 178 chr11 128168275 128169749 128168840 N NA NA ETS1,FLI1,KCNJ1 IMR90 Hi-C 24141950 FLI1 394062 179 chr11 134830586 134832675 134832083 N NA NA NA NA NA NA GLB1L3 684311 180 chr11 134844643 134846125 134845335 N NA NA NA NA NA NA GLB1L3 698368 181 chr11 17228053 17231311 17229557 N NA PIK3C2A NA NA NA NA PIK3C2A 36699 182 chr11 35057709 35058426 35058240 N NA NA CD44,SLC1A2,PDHX IMR90 Hi-C 24141950 CD44 101991 183 chr11 35103050 35105338 35104699 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 55079 184 chr11 35109320 35110698 35109647 Y CD44 CD44 CD44,PDHX,SLC1A2 IMR90 Hi-C 24141950 CD44 49719 185 chr11 35148138 35149415 35148697 N NA CD44 PDHX IMR90 Hi-C 24141950 CD44 11002 186 chr11 355157 356528 355906 Y NA IFITM2,IFITM1 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFITM1 41166 187 chr11 47415384 47418657 47416473 N NA SPI1,SLC39A13,PSMC3 SPI1,SLC39A13 K562 ChIA-PET 22265404 SLC39A13 11389 188 chr11 58868072 58870743 58869988 N NA FAM111B,FAM111A FAM111B IMR90 Hi-C 24141950 FAM111B 3915 189 chr11 60854531 60861612 60859403 N NA NA VPS37C,CD5,CD6 IMR90 Hi-C 24141950 VPS37C 67304 190 chr11 65237711 65241961 65239701 Y BATF2,FAU,CDC42EP2,KCNK7,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 NEAT1,MALAT1 TIGD3,SCYL1,SLC25A45,FRMD8 K562 ChIA-PET 22265404 MALAT1 23272 191 chr11 65243126 65246800 65244990 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 18433 192 chr11 65253834 65257356 65255749 N NA MALAT1,SCYL1 MALAT1,FRMD8,NEAT1,MIR612,POLA2,DPF2,SLC25A45,TIGD3,SCYL1 IMR90 Hi-C 24141950 MALAT1 7877 193 chr11 6766253 6767951 6767687 N NA GVINP1 NA NA NA NA GVINP1 23143 194 chr11 68922982 68930717 68924228 N NA NA ORAOV1,CCND1,FGF19,MYEOV IMR90 Hi-C 24141950 TPCN2 106632 195 chr11 73489304 73492166 73490601 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 6751 196 chr11 75945838 75947065 75946726 N NA NA C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 144815 197 chr11 76340146 76341121 76340722 N NA LRRC32 NA NA NA NA LRRC32 40670 198 chr11 87911241 87912797 87912083 N NA RAB38 GRM5 IMR90 Hi-C 24141950 RAB38 2606 199 chr11 88086362 88087731 88086809 N NA CTSC CTSC K562 ChIA-PET 22265404 CTSC 15421 200 chr11 9384680 9387361 9386100 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 18808 201 chr11 94005215 94006557 94006270 N NA NA HEPHL1 IMR90 Hi-C 24141950 PANX1 143121 202 chr11 9587222 9588268 9587636 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1 ZNF143,LOC644656 MCF7,K562 ChIA-PET 22265404 WEE1 6960 203 chr11 9634670 9637562 9635326 N NA WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 39442 204 chr12 102251788 102254423 102253541 Y DRAM1 GNPTAB,DRAM1 GNPTAB,DRAM1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DRAM1 16682 205 chr12 102877223 102878652 102877865 N NA NA NA NA NA NA ASCL1 472800 206 chr12 103495171 103497200 103496380 N NA NA NA NA NA NA ASCL1 143719 207 chr12 103898010 103900384 103899392 N NA NA NA NA NA NA NT5DC3 334591 208 chr12 10695571 10697230 10696310 N NA NA CLEC1A,KLRC4-KLRK1,KLRK1 IMR90 Hi-C 24141950 MAGOHB 68978 209 chr12 10706547 10708317 10707449 Y KLRD1,KLRD1,KLRK1,KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1 NA CLEC1A,KLRC4-KLRK1 IMR90 Hi-C 24141950 MAGOHB 57891 210 chr12 110516145 110518154 110517564 Y GIT2,RAD9B,C12orf76 NA C12orf76 K562 ChIA-PET 22265404 ANKRD13A 78910 211 chr12 111028418 111030609 111028890 Y ARPC3,PPTC7,HVCN1 PPTC7,TCTN1 PPTC7,GPN3,FAM216A,VPS29,RAD9B,PPP1CC,TCTN1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPTC7 7354 212 chr12 111840735 111841534 111841259 N NA FAM109A,SH2B3 NA NA NA NA SH2B3 2218 213 chr12 120729336 120730803 120729993 N NA PXN PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PXN 25762 214 chr12 12162530 12164131 12162759 N NA NA ETV6,LOC338817,CDKN1B IMR90 Hi-C 24141950 LOH12CR2 345870 215 chr12 12184717 12187063 12185919 Y ETV6,BCL2L14 NA ETV6,LOC338817,CDKN1B,BCL2L14,MANSC1,LOH12CR2,LOH12CR1,GPR19 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOH12CR2 322938 216 chr12 123846892 123851520 123849970 N NA SBNO1,SETD8 SBNO1,RILPL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SBNO1 11904 217 chr12 125533576 125534973 125534205 Y NA AACS AACS K562,MCF7 ChIA-PET 22265404 AACS 14952 218 chr12 12734810 12736852 12736050 Y NA DUSP16,CREBL2 LOH12CR1,LOH12CR2,DUSP16,GPR19,CDKN1B,CREBL2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP16 19362 219 chr12 129314196 129315141 129314736 N NA SLC15A4,GLT1D1 SLC15A4 K562 ChIA-PET 22265404 SLC15A4 5655 220 chr12 131200416 131201652 131201143 N NA NA NA NA NA NA RAN 154965 221 chr12 14436033 14437431 14436795 N NA NA NA NA NA NA ATF7IP 81180 222 chr12 1637847 1644255 1642677,1639551 Y,N NA;NA NA ERC1,LOC100292680,FBXL14 IMR90 Hi-C 24141950 FBXL14 59076 223 chr12 19584752 19585731 19585086 N NA AEBP2 AEBP2 IMR90 Hi-C 24141950 AEBP2 6877 224 chr12 20047376 20048230 20047541 N NA NA PDE3A IMR90 Hi-C 24141950 AEBP2 454768 225 chr12 25537264 25540320 25539193 Y NA NA BCAT1,CASC1,KRAS,LYRM5,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 133410 226 chr12 26309039 26310791 26309680 N NA BHLHE41 BHLHE41,ITPR2,SSPN IMR90 Hi-C 24141950 BHLHE41 31036 227 chr12 26426501 26428544 26427724 Y NA NA SSPN,BHLHE41,ITPR2 IMR90 Hi-C 24141950 BHLHE41 148498 228 chr12 27359325 27361887 27360545 N NA STK38L STK38L IMR90 Hi-C 24141950 STK38L 35191 229 chr12 27372585 27374599 27373309 N NA STK38L STK38L,ARNTL2,PPFIBP1,REP15,MED21 IMR90 Hi-C 24141950 STK38L 22479 230 chr12 27976364 27977887 27977465 N NA KLHDC5 NA NA NA NA KLHDC5 43177 231 chr12 28342276 28344869 28343609 N NA NA KLHDC5,CCDC91 IMR90 Hi-C 24141950 KLHDC5 409089 232 chr12 31899097 31904359 31902315,31900002 Y,Y C12orf35,AMN1,H3F3C;AMN1,H3F3C NA METTL20,AMN1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 METTL20 99003 233 chr12 31959638 31961421 31960563 N NA NA NA NA NA NA C12orf35 150932 234 chr12 31963915 31965124 31964254 N NA NA NA NA NA NA C12orf35 147229 235 chr12 32048060 32050525 32049719 N NA NA AMN1 IMR90 Hi-C 24141950 C12orf35 61828 236 chr12 4226749 4227999 4227336 N NA NA CCND2 IMR90 Hi-C 24141950 CCND2 154903 237 chr12 4254763 4256757 4255901 N NA NA CCND2 IMR90 Hi-C 24141950 CCND2 126145 238 chr12 4262309 4263883 4262818 Y EFCAB4B,PARP11,C12orf4 NA CCND2 IMR90 Hi-C 24141950 CCND2 119019 239 chr12 4273345 4274838 4274275 Y CCND2 NA NA NA NA NA CCND2 108064 240 chr12 46776030 46778473 46777312 N NA SLC38A2 SLC38A1 K562,MCF7 ChIA-PET 22265404 SLC38A2 9385 241 chr12 49626574 49629468 49628085 N NA TUBA1A,TUBA1C DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2,LMBR1L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 29397 242 chr12 53763970 53766878 53765175 Y CSAD,ITGB7,PFDN5,SP1,SP1,PRR13 AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 7101 243 chr12 59988748 59992702 59990844 N NA NA NA NA NA NA LRIG3 674486 244 chr12 6275890 6278947 6276877 Y VAMP1,TNFRSF1A,TAPBPL NA VWF,CD9,PLEKHG6 IMR90 Hi-C 24141950 TNFRSF1A 172336 245 chr12 6387083 6388650 6387686 N NA NA VWF,PLEKHG6,CD9,TNFRSF1A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFRSF1A 62633 246 chr12 68758349 68759830 68758964 Y IFNG,RAP1B NA RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAP1B 244789 247 chr12 775124 777174 776177 Y NA NA NINJ2,CCDC77,B4GALNT3,WNK1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WNK1 84915 248 chr12 782828 784777 783390 N NA NA CCDC77,NINJ2,B4GALNT3,WNK1 IMR90 Hi-C 24141950 WNK1 77312 249 chr12 8122455 8123855 8123486 Y CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC2A3 33563 250 chr12 8178162 8180390 8179603 N NA FOXJ2 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 4969 251 chr12 827414 829734 828619 N NA WNK1 NINJ2,WNK1,B4GALNT3 IMR90 Hi-C 24141950 WNK1 32355 252 chr12 90256888 90257581 90257569 Y POC1B NA LOC338758 IMR90 Hi-C 24141950 LOC338758 154156 253 chr12 90321773 90323526 90322431 N NA NA NA NA NA NA LOC338758 219041 254 chr12 90342889 90344786 90344043 N NA NA LOC338758 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC338758 240157 255 chr12 92755804 92758522 92757207 N NA NA NA NA NA NA LOC256021 219357 256 chr12 92792344 92793573 92792846 N NA NA NA NA NA NA LOC256021 255897 257 chr12 92859815 92862495 92860566 N NA NA NA NA NA NA LOC256021 323368 258 chr12 92896005 92900401 92897153,92899375 N,Y NA;EEA1,BTG1 NA LOC256021 MCF7 ChIA-PET 22265404 LOC256021 359558 259 chr12 92931917 92935080 92933802 N NA NA NA NA NA NA EEA1 388027 260 chr12 92937711 92939069 92938075 N NA NA NA NA NA NA EEA1 384038 261 chr12 92944848 92948877 92946684 N NA NA LOC256021 IMR90 Hi-C 24141950 EEA1 374230 262 chr12 92950271 92951504 92950897 N NA NA LOC256021 IMR90 Hi-C 24141950 EEA1 371603 263 chr12 95099298 95101333 95100413 Y NA NA PLXNC1,CCDC41,NDUFA12,TMCC3 IMR90 Hi-C 24141950 TMCC3 54974 264 chr12 95162271 95163838 95162986 N NA NA TMCC3,PLXNC1 IMR90 Hi-C 24141950 TMCC3 117947 265 chr12 95210708 95213742 95212007 N NA NA PLXNC1,NDUFA12 IMR90 Hi-C 24141950 TMCC3 166384 266 chr12 95264537 95269041 95267086 Y NA NA NA NA NA NA NDUFA12 128470 267 chr13 100071851 100073765 100072739 Y GPR18,GPR183 MIR548AN UBAC2,MIR548AN,GPR18,DOCK9,UBAC2-AS1 IMR90 Hi-C 24141950 MIR548AN 13297 268 chr13 100082704 100084864 100084253 N NA MIR548AN MIR548AN,UBAC2,DOCK9,UBAC2-AS1 IMR90 Hi-C 24141950 MIR548AN 24150 269 chr13 103658852 103660305 103659605 N NA NA NA NA NA NA METTL21CP1 126403 270 chr13 105791872 105792785 105792079 N NA NA NA NA NA NA ARGLU1 1427729 271 chr13 111605846 111609378 111607701 Y RAB20,ING1,ING1,ANKRD10 ANKRD10 ARHGEF7,ANKRD10 IMR90 Hi-C 24141950 ANKRD10 38430 272 chr13 114912464 114913585 114912614 N NA RASA3 NA NA NA NA RASA3 14369 273 chr13 22634947 22637120 22635901 N NA NA NA NA NA NA EFHA1 456592 274 chr13 22688258 22690743 22688896 Y NA NA NA NA NA NA EFHA1 509903 275 chr13 24553497 24554977 24553935 N NA NA SPATA13 IMR90 Hi-C 24141950 MIPEP 89910 276 chr13 25755205 25756914 25756045 N NA NA NA NA NA NA PABPC3 84929 277 chr13 30968808 30970279 30969235 Y NA LINC00426 LINC00426,KATNAL1,USPL1,HMGB1,UBL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00426 20772 278 chr13 40621038 40622185 40621605 N NA NA FOXO1,TTL IMR90 Hi-C 24141950 FOXO1 618549 279 chr13 40634203 40635368 40634563 N NA NA TTL,FOXO1 IMR90 Hi-C 24141950 FOXO1 605366 280 chr13 41091367 41092379 41092064 N NA NA FOXO1,TTL IMR90 Hi-C 24141950 FOXO1 148355 281 chr13 42968489 42970000 42968928 N NA NA NA NA NA NA AKAP11 122200 282 chr13 44715091 44716164 44715926 N NA NA TSC22D1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TSC22D1-AS1 433868 283 chr13 45491641 45493096 45492213 Y TSC22D1 NA NA NA NA NA NUFIP1 70517 284 chr13 53424996 53426260 53425688 N NA NA NA NA NA NA SUGT1 198165 285 chr13 78003364 78004368 78003764 N NA NA NA NA NA NA MYCBP2 102187 286 chr13 95200515 95202730 95201702 Y NA TGDS NA NA NA NA TGDS 45781 287 chr14 100437306 100439238 100437941 N NA NA EML1,EVL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EVL 92513 288 chr14 100658570 100660306 100659487 Y NA DEGS2,YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DEGS2 32558 289 chr14 100677322 100681572 100680687 N NA YY1 DEGS2,YY1,EVL IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YY1 23530 290 chr14 100688004 100688967 100688261 N NA YY1 YY1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 YY1 16135 291 chr14 103233641 103235704 103235185 N NA TRAF3 TECPR2,RCOR1,TRAF3,CDC42BPB,AMN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRAF3 8112 292 chr14 106022983 106029857 106027347 N NA TMEM121 NA NA NA NA TMEM121 30030 293 chr14 106031730 106041636 106032657,106032753,106039592 N,N,N NA;NA;NA TMEM121 NA NA NA NA TMEM121 38777 294 chr14 106043161 106050434 106043886,106048551 N,N NA;NA NA NA NA NA NA TMEM121 50208 295 chr14 106053019 106056661 106055550 N NA NA NA NA NA NA TMEM121 60066 296 chr14 106143455 106150682 106147857,106144251 N,N NA;NA ELK2AP NA NA NA NA ELK2AP 4311 297 chr14 106151574 106155283 106152625,106152492 N,N NA;NA ELK2AP NA NA NA NA ELK2AP 12430 298 chr14 106165059 106180447 106167416,106172691,106176411,106178774 Y,N,N,N NA;NA;NA;NA ELK2AP NA NA NA NA ELK2AP 25915 299 chr14 106206602 106208096 106206919 N NA NA NA NA NA NA ELK2AP 67458 300 chr14 106233237 106235540 106235006 N NA NA NA NA NA NA ELK2AP 94093 301 chr14 106284117 106286055 106284884 Y TEX22,C14orf80 NA NA NA NA NA ELK2AP 144973 302 chr14 106315531 106330960 106322152,106329339 N,N NA;NA NA NA NA NA NA ELK2AP 176387 303 chr14 106349719 106350839 106350343 N NA NA NA NA NA NA ELK2AP 210575 304 chr14 106352679 106357668 106355706,106357513 N,N NA;NA NA NA NA NA NA ELK2AP 213535 305 chr14 106362013 106364413 106363745 N NA NA NA NA NA NA ELK2AP 222869 306 chr14 106452437 106453765 106453096 N NA NA NA NA NA NA ELK2AP 313293 307 chr14 106552178 106554254 106552815 N NA NA NA NA NA NA ELK2AP 413034 308 chr14 106875554 106878784 106878107 N NA NA NA NA NA NA ELK2AP 736410 309 chr14 106924663 106928889 106926691,106928412 N,N NA;NA NA NA NA NA NA ELK2AP 785519 310 chr14 106973333 106974498 106974107 N NA NA NA NA NA NA ELK2AP 834189 311 chr14 107083114 107084743 107083655 N NA NA NA NA NA NA ELK2AP 943970 312 chr14 107154159 107155304 107154799 N NA NA KIAA0125 IMR90 Hi-C 24141950 ELK2AP 1015015 313 chr14 107251850 107254383 107253374 Y NA NA NA NA NA NA ELK2AP 1112706 314 chr14 107258845 107260662 107259554 N NA NA NA NA NA NA ELK2AP 1119701 315 chr14 21136578 21136957 21136646 N NA NA NA NA NA NA PNP 199040 316 chr14 22850302 22853856 22852093 N NA NA OXA1L,SLC7A7,RBM23,DAD1 IMR90 Hi-C 24141950 DAD1 204287 317 chr14 22950647 22952172 22951356 N NA NA SLC7A7 IMR90 Hi-C 24141950 DAD1 105971 318 chr14 22960135 22963262 22961308 Y RBM23 NA DAD1,MMP14 IMR90 Hi-C 24141950 DAD1 94881 319 chr14 22973923 22985020 22976928,22984569 N,N NA;NA NA SLC7A7,OXA1L,DAD1 IMR90 Hi-C 24141950 DAD1 73123 320 chr14 22999738 23002354 23000642 N NA NA MMP14,REM2,RBM23,PRMT5 IMR90 Hi-C 24141950 DAD1 55789 321 chr14 23291059 23293207 23292533 N NA SLC7A7,MRPL52,MMP14,LRP10 REM2 MCF7 ChIA-PET 22265404 SLC7A7 2039 322 chr14 35829683 35831916 35830125 N NA NFKBIA PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA IMR90 Hi-C 24141950 NFKBIA 42044 323 chr14 35834236 35835474 35834853 Y BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA NFKBIA PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFKBIA 38486 324 chr14 50328059 50331584 50330270,50328402 N,N NA;NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 8520 325 chr14 50334240 50336200 50334991 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 METTL21D,SOS2,ARF6,C14orf182,NEMF,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 14701 326 chr14 50503932 50506795 50505141 N NA NA C14orf182,ARF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C14orf183 52566 327 chr14 52310720 52316479 52311187,52313994 Y,N NA;NA GNG2 GNG2,FRMD6,C14orf166 IMR90 Hi-C 24141950 GNG2 10543 328 chr14 54036346 54038177 54037713 N NA NA BMP4 IMR90 Hi-C 24141950 BMP4 385377 329 chr14 54079309 54081247 54080793 N NA NA NA NA NA NA BMP4 342307 330 chr14 55564690 55566717 55565543 N NA MAPK1IP1L,LGALS3 LGALS3,DLGAP5 IMR90 Hi-C 24141950 LGALS3 29218 331 chr14 60671382 60674005 60671609,60673463 N,N NA;NA DHRS7,PPM1A NA NA NA NA PPM1A 38465 332 chr14 60678935 60681085 60679741 Y NA DHRS7,PPM1A NA NA NA NA PPM1A 31385 333 chr14 65753638 65756196 65754438 N NA NA FUT8,LOC645431,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FUT8 121114 334 chr14 65768466 65773641 65769285,65771794 N,N NA;NA NA MIR4708 IMR90 Hi-C 24141950 FUT8 103669 335 chr14 65837395 65839572 65838409 N NA FUT8,LOC645431 MIR4708,FUT8,LOC645431 IMR90 Hi-C 24141950 FUT8 37738 336 chr14 69129972 69130716 69130571 N NA NA RAD51B,ZFP36L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 132244 337 chr14 69150861 69153537 69152327 N NA NA RAD51B,ZFP36L1 IMR90 Hi-C 24141950 ZFP36L1 109423 338 chr14 69280868 69283121 69282277 N NA ZFP36L1 RAD51B,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 17908 339 chr14 69287030 69288387 69287873 Y NA ZFP36L1 RAD51B,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 24070 340 chr14 71786256 71792605 71787985,71792102 N,N NA;NA NA SIPA1L1,PCNX IMR90 Hi-C 24141950 LOC145474 161973 341 chr14 71824226 71827381 71825251 N NA NA SIPA1L1,LOC145474 IMR90 Hi-C 24141950 LOC145474 127197 342 chr14 71989857 71992797 71991340 N NA LOC145474,SIPA1L1 SIPA1L1 IMR90 Hi-C 24141950 SIPA1L1 3245 343 chr14 75961701 75964625 75963835 Y C14orf1,BATF BATF TMED10,NEK9 IMR90 Hi-C 24141950 BATF 24159 344 chr14 75981355 75982480 75981642 N NA BATF JDP2,BATF,FLVCR2,ZC2HC1C,TMED10,NEK9,LOC731223,C14orf1 IMR90 Hi-C 24141950 BATF 6304 345 chr14 77421947 77423585 77422811 N NA NA IRF2BPL,KIAA1737 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 71449 346 chr14 77426772 77431025 77428276 Y NA NA IRF2BPL MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BPL 64009 347 chr14 77498355 77501217 77500153 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 3321 348 chr14 77505581 77507616 77506549 N NA IRF2BPL IRF2BPL IMR90 Hi-C 24141950 IRF2BPL 10547 349 chr14 94455206 94458708 94456440 N NA ASB2,LINC00521,OTUB2 LINC00521 MCF7 ChIA-PET 22265404 LINC00521 4934 350 chr14 99439049 99439929 99439589 Y NA NA NA NA NA NA SETD3 507297 351 chr15 100044185 100045781 100044872 N NA NA LRRC28,MEF2A IMR90 Hi-C 24141950 MEF2A 60352 352 chr15 100051451 100053926 100052454 N NA NA MEF2A,LRRC28,TTC23 IMR90 Hi-C 24141950 MEF2A 52207 353 chr15 22448061 22449788 22448829 N NA NA HERC2P3 IMR90 Hi-C 24141950 REREP3 96777 354 chr15 28833618 28836018 28834487 N NA NA NA NA NA NA HERC2P9 63570 355 chr15 31732141 31734172 31733168 Y MTMR10,KLF13 NA KLF13,OTUD7A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 113058 356 chr15 34957463 34959488 34958133 N NA NA AQR IMR90 Hi-C 24141950 GOLGA8B 81692 357 chr15 42782491 42785092 42783347 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 2412 358 chr15 45172457 45175673 45173418,45174811 N,N NA;NA NA SORD IMR90 Hi-C 24141950 SORD 139629 359 chr15 46996232 46997305 46996631 N NA NA NA NA NA NA SQRDL 1068976 360 chr15 51172701 51175056 51173511 Y USP8,SPPL2A AP4E1 TRPM7,SPPL2A,USP50,ASB18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,19890323,22265404 AP4E1 25813 361 chr15 51176804 51178386 51177624 Y USP8,TRPM7,SPPL2A AP4E1 TRPM7,SPPL2A,USP50,AP4E1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AP4E1 22483 362 chr15 56648496 56649899 56649001 N NA TEX9 NA NA NA NA TEX9 7745 363 chr15 58623562 58625350 58624898 N NA NA LIPC,ADAM10,FAM63B,SLTM IMR90 Hi-C 24141950 ADAM10 416827 364 chr15 59703334 59705696 59704452 N NA MYO1E,FAM81A MYO1E,LDHAL6B,FAM81A,CCNB2 IMR90 Hi-C 24141950 FAM81A 24676 365 chr15 62681203 62684335 62682696 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 C2CD4B 223721 366 chr15 63765527 63768032 63767073 N NA USP3 APH1B,RAB8B,FBXL22,LOC100130855,USP3,CA12,HERC1,FAM96A,SNX1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 USP3 28678 367 chr15 65183959 65189008 65186298,65187104 Y,Y ZNF609,OAZ2,PLEKHO2,SPG21,SPG21;ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16 PLEKHO2,ANKDD1A SPG21 IMR90 Hi-C 24141950 ANKDD1A 15093 368 chr15 65591015 65594021 65593047 N NA NA MTFMT,RASL12,OSTBETA,CLPX,UBAP1L,PDCD7,PARP16,CILP MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CLPX 113452 369 chr15 65596088 65598484 65596870 Y DENND4A NA PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IGDCC4 116926 370 chr15 66661972 66663621 66662443 Y MAP2K1 TIPIN,MAP2K1 RPL4,SNORD18C,SNORD18B,SNORD16,SNAPC5,ZWILCH IMR90 Hi-C 24141950 TIPIN 12918 371 chr15 68154797 68157079 68155763 N NA SKOR1 PIAS1,CLN6,CALML4,C15orf61,LOC100506686 IMR90 Hi-C 24141950 SKOR1 36856 372 chr15 70610994 70612469 70611936 N NA NA C15orf50,TLE3,LOC145837 IMR90 Hi-C 24141950 TLE3 220738 373 chr15 70793337 70797614 70796524 N NA NA LOC145837,TLE3,KIF23,C15orf50,UACA,RPLP1 IMR90 Hi-C 24141950 TLE3 403081 374 chr15 74390144 74394338 74392602 N NA NA NA NA NA NA PML 103130 375 chr15 77196299 77198001 77197746 N NA RCN2 ETFA IMR90 Hi-C 24141950 RCN2 25961 376 chr15 80269130 80271175 80270597 Y ZFAND6,BCL2A1 BCL2A1 BCL2A1 K562 ChIA-PET 22265404 BCL2A1 5487 377 chr15 80302578 80304142 80303575 Y ZFAND6,BCL2A1 BCL2A1,ZFAND6 FAH,ZFAND6,ST20-MTHFS,MTHFS IMR90 Hi-C 24141950 BCL2A1 38935 378 chr15 80308727 80314492 80310143 N NA BCL2A1,ZFAND6 ST20-MTHFS,ZFAND6,C15orf37,KIAA1024,FAH IMR90 Hi-C 24141950 ZFAND6 37418 379 chr15 80324464 80325501 80325124 N NA ZFAND6 ST20-MTHFS,FAH,ZFAND6,MTHFS IMR90 Hi-C 24141950 ZFAND6 26409 380 chr15 85871629 85875235 85873634 N NA AKAP13 AKAP13 IMR90 Hi-C 24141950 AKAP13 48636 381 chr15 93373609 93376301 93375234 Y NA LOC100507217 CHD2,LOC100507217,ASB9P1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100507217 49772 382 chr15 94773701 94775205 94774729 N NA NA NA NA NA NA CHD2 1330150 383 chr15 99558113 99562634 99558568 N NA NA PGPEP1L,IGF1R MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 MEF2A 543499 384 chr16 10390638 10392267 10391109 N NA NA NA NA NA NA ATF7IP2 87645 385 chr16 11326798 11327902 11327123 Y SNN,LITAF,LITAF,NUBP1,CIITA,SOCS1 SOCS1 CLEC16A IMR90 Hi-C 24141950 SOCS1 22137 386 chr16 11390727 11393500 11391651 N NA SOCS1,RMI2 SOCS1,DEXI,CLEC16A,PRM2,PRM3,TNP2,RMI2,ZC3H7A,BCAR4 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SOCS1 40688 387 chr16 11403641 11407045 11404722 N NA RMI2 CLEC16A,TNP2,RMI2,ZC3H7A,BCAR4 IMR90 Hi-C 24141950 RMI2 32266 388 chr16 12706525 12707545 12707042 N NA NA SNX29,CPPED1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SNX29 635923 389 chr16 13529762 13530281 13529882 N NA NA NA NA NA NA ERCC4 483733 390 chr16 14447765 14449915 14448928 N NA NA PARN,ERCC4,MIR365A,MIR193B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARN 274213 391 chr16 14498808 14500724 14500075 N NA NA PARN,MIR193B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARN 223404 392 chr16 17164519 17165442 17165002 N NA NA NA NA NA NA XYLT1 399296 393 chr16 21844087 21849735 21847176 N NA RRN3P1 NA NA NA NA RRN3P1 13592 394 chr16 21941185 21942626 21942134 N NA UQCRC2 NA NA NA NA UQCRC2 21983 395 chr16 22200432 22202174 22201589 Y POLR3E,CDR2 EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 15418 396 chr16 22206574 22207621 22207154 Y NA EEF2K POLR3E,EEF2K,UQCRC2,PDZD9,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 9971 397 chr16 25077154 25079105 25078196 N NA LCMT1 LCMT1,LOC100506655 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LCMT1 43942 398 chr16 25117683 25119326 25118489 N NA LCMT1 ARHGAP17,LCMT1,ZKSCAN2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LCMT1 3721 399 chr16 27399133 27400269 27399283 N NA IL21R IL21R,LOC283888 IMR90 Hi-C 24141950 IL21R 13214 400 chr16 2917808 2919206 2918238 Y NA ZG16B,FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 13990 401 chr16 29655646 29656653 29656213 N NA SPN,QPRT SPN K562 ChIA-PET 22265404 SPN 17647 402 chr16 30469347 30472057 30470635 N NA DCTPP1,SEPHS2,ITGAL ZNF771,DCTPP1,SEPHS2,ZNF688,PRR14,ZNF764,ITGAL,ZNF689,ZNF747,ZNF785,ZNF768,SRCAP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ITGAL 11926 403 chr16 30825109 30827237 30825717 Y NA ZNF629 ZNF629,RNF40,MIR4519 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF629 26586 404 chr16 34833264 34835099 34833613 N NA NA NA NA NA NA ZNF267 2948185 405 chr16 57333314 57334600 57334174 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,POLR2C,GPR114,CCDC102A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 54276 406 chr16 57634547 57636951 57636025 Y GPR114 NA NA NA NA NA GPR114 57946 407 chr16 68503968 68505265 68504534 N NA NA PRMT7,SMPD3 IMR90 Hi-C 24141950 ZFP90 68396 408 chr16 71851391 71854123 71852271 N NA AP1G1,ATXN1L AP1G1 K562 ChIA-PET 22265404 AP1G1 8415 409 chr16 72697194 72699781 72698933 N NA NA ZFHX3 IMR90 Hi-C 24141950 ZFHX3 392753 410 chr16 77223530 77226658 77224752 N NA SYCE1L NA NA NA NA SYCE1L 6691 411 chr16 84674234 84675948 84674964 Y KLHL36 COTL1,KLHL36 KIAA1609,COTL1,USP10,KLHL36,ZDHHC7 IMR90 Hi-C 24141950 KLHL36 6183 412 chr16 85259643 85265160 85261179 N NA NA LOC400548,KIAA0513,FAM92B,LINC00311,LOC727710,KIAA0182 IMR90 Hi-C 24141950 LINC00311 51404 413 chr16 85586814 85594092 85589382 N NA NA LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0182 50937 414 chr16 85789461 85790708 85790187 Y IRF8 COX4NB,COX4I1 NA NA NA NA COX4NB 42440 415 chr16 85979229 85983357 85981837 N NA IRF8 COX4I1,IRF8,COX4NB IMR90 Hi-C 24141950 IRF8 46455 416 chr16 86021638 86023669 86022638 N NA NA COX4NB,COX4I1,MTHFSD,LOC400550,FLJ30679,IRF8,C16orf74,LOC146513 IMR90 Hi-C 24141950 IRF8 88864 417 chr16 86028355 86030581 86029115 N NA NA MTHFSD,FLJ30679,IRF8,COX4I1,COX4NB,C16orf74,LOC732275,LOC400550,FOXF1 IMR90 Hi-C 24141950 IRF8 95581 418 chr16 87807847 87812416 87808600 N NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 8249 419 chr17 1102196 1102893 1102587 N NA ABR YWHAE,ABR,BHLHA9,TUSC5,CRK,PITPNA,LOC100306951,INPP5K,SLC43A2 IMR90 Hi-C 24141950 ABR 11580 420 chr17 1106385 1107969 1106957 N NA ABR ABR,INPP5K,PITPNA,SLC43A2,YWHAE,LOC100306951,BHLHA9,MYO1C,CRK IMR90 Hi-C 24141950 ABR 15769 421 chr17 1130170 1132632 1131421 N NA ABR ABR,CRK,YWHAE IMR90 Hi-C 24141950 ABR 39554 422 chr17 14650082 14651248 14650582 N NA NA HS3ST3B1,HS3ST3A1,COX10 IMR90 Hi-C 24141950 HS3ST3B1 445576 423 chr17 16311298 16312794 16311697 N NA UBB,TRPV2,C17orf76-AS1 TRPV2,C17orf76-AS1 MCF7 ChIA-PET 22265404 TRPV2 6062 424 chr17 16883069 16885397 16884364 N NA TNFRSF13B MPRIP IMR90 Hi-C 24141950 TNFRSF13B 7667 425 chr17 16890109 16892907 16892100 N NA TNFRSF13B MPRIP,FLCN IMR90 Hi-C 24141950 TNFRSF13B 14707 426 chr17 18314373 18316899 18315371 N NA SHMT1 NA NA NA NA SHMT1 47517 427 chr17 19014252 19016933 19015230 N NA GRAPL NA NA NA NA GRAPL 13849 428 chr17 25665817 25666966 25666590 N NA WSB1 WSB1,MIR4522,KSR1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WSB1 44711 429 chr17 25793295 25794238 25793722 N NA KSR1 TBC1D3P5,KSR1 IMR90 Hi-C 24141950 KSR1 4798 430 chr17 30453988 30456144 30454660 N NA RHOT1 RHOT1,LRRC37B IMR90 Hi-C 24141950 RHOT1 13329 431 chr17 38752863 38756903 38754983 Y NA CCR7,SMARCE1 KRT14,KRT42P,KRT26,GJD3,TOP2A,TNS4,KRT27,KRT28,RARA,CDC6,IGFBP4,CCR7,SMARCE1,KRT222,KRT9,LOC147093,KRT17,KRT33A,KRT33B IMR90 Hi-C 24141950 CCR7 31127 432 chr17 38757405 38761263 38758845 N NA CCR7,SMARCE1 KRT14,KRT42P,KRT26,KRT28,CCR7,TOP2A,IGFBP4,KRT33A,KRT33B IMR90 Hi-C 24141950 CCR7 35669 433 chr17 39821609 39823162 39822763 Y NA EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 21965 434 chr17 41392264 41394730 41393298 N NA TMEM106A BRCA1,NBR2,NBR1,RND2,VAT1,IFI35,RPL27,TMEM106A,LOC100130581 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 28370 435 chr17 41399323 41402128 41400417 N NA TMEM106A IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581,DHX8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM106A 35429 436 chr17 41797606 41799050 41798247 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 DUSP3 57318 437 chr17 4298596 4302938 4300317 N NA UBE2G1 UBE2G1,SPNS3,ANKFY1,ZZEF1,CYB5D2 IMR90 Hi-C 24141950 UBE2G1 28627 438 chr17 44343399 44345766 44344331 Y NA KANSL1,LRRC37A KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LRRC37A 26731 439 chr17 45281077 45283241 45282685 N NA CDC27,ITGB3 ITGB3,CDC27,MYL4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC27 14412 440 chr17 46517149 46517768 46517200 N NA SKAP1 SKAP1,HOXB3,HOXB2,HOXB-AS3,HOXB6 IMR90 Hi-C 24141950 SKAP1 9555 441 chr17 51183034 51183832 51183432 N NA NA NA NA NA NA UTP18 1845137 442 chr17 53315298 53316562 53315798 Y HLF NA STXBP4,HLF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MMD 182779 443 chr17 62980516 62983651 62982424 Y DDX5,CEP95,GNA13 AMZ2P1 AMZ2P1,GNA13 K562,MCF7 ChIA-PET 22265404 AMZ2P1 8813 444 chr17 63096032 63096586 63096246 N NA GNA13,RGS9 RGS9,LRRC37A3,GNA13,AMZ2P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RGS9 36870 445 chr17 63118456 63120228 63119577 Y GNA13 RGS9 RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RGS9 13228 446 chr17 66015688 66018132 66016142 Y NA KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 13716 447 chr17 66232963 66234569 66234056 N NA LOC440461,AMZ2,ARSG NA NA NA NA AMZ2 9576 448 chr17 66770364 66771565 66771055 N NA NA FAM20A,ABCA9,ABCA10,ABCA8 IMR90 Hi-C 24141950 PRKAR1A 262254 449 chr17 67321594 67324358 67322997 N NA NA KCNJ16,UNK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKAR1A 813484 450 chr17 7035281 7038042 7036212 Y TNFSF12,SAT2,POLR2A,CD68,CD68,XAF1,GABARAP,EIF5A,ACAP1 NA CLEC10A,SLC16A13,MIR497HG,BCL6B,ASGR1,ASGR2 IMR90 Hi-C 24141950 ACADVL 85111 451 chr17 74242331 74243522 74242858 N NA RNF157,FAM100B MRPL38,SRP68,GALR2,ZACN,EXOC7,RNF157,FAM100B,QRICH2,PRPSAP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNF157 5941 452 chr17 75953549 75955017 75954622 Y NA NA TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100131096 152863 453 chr17 79317810 79320767 79319480 Y FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1 SLC38A10 BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A10 48714 454 chr18 33160630 33162671 33161434 N NA NA NA NA NA NA ZNF24 236204 455 chr18 42685955 42687220 42686506 Y NA NA SLC14A2 IMR90 Hi-C 24141950 EPG5 860085 456 chr18 47834430 47835619 47834939 N NA MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 19738 457 chr18 47838457 47840093 47839606 N NA MBD1,CXXC1 CCDC11 IMR90 Hi-C 24141950 CXXC1 23765 458 chr18 49250933 49252253 49251509 N NA NA NA NA NA NA MEX3C 526882 459 chr18 51788933 51791989 51790574 N NA MBD2,POLI POLI MCF7 ChIA-PET 22265404 POLI 3860 460 chr18 54743664 54745557 54745182 Y NA NA NA NA NA NA TXNL1 437744 461 chr18 55512125 55512744 55512263 N NA NA ATP8B1,NEDD4L,ALPK2 IMR90 Hi-C 24141950 NEDD4L 198866 462 chr18 56324238 56326528 56325354 N NA MALT1 ALPK2,MALT1 IMR90 Hi-C 24141950 MALT1 12090 463 chr18 57539203 57540061 57539586 N NA PMAIP1 CCBE1,PMAIP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PMAIP1 27131 464 chr18 57542610 57544374 57543590 N NA PMAIP1 PMAIP1,CCBE1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 PMAIP1 22818 465 chr18 57593485 57595990 57594634 Y NA PMAIP1 PMAIP1 MCF7 ChIA-PET 22265404 PMAIP1 26293 466 chr18 67648000 67649839 67649304 N NA NA NA NA NA NA RTTN 223123 467 chr18 9433682 9435116 9434306 Y NA RALBP1 ANKRD12,TWSG1,CCDC165 IMR90 Hi-C 24141950 RALBP1 40414 468 chr19 10522643 10525019 10523121 Y C19orf66,ICAM3,S1PR5,S1PR5,ATG4D,TYK2 TYK2,CDC37,PDE4A CDC37 MCF7,K562 ChIA-PET 22265404 PDE4A 2430 469 chr19 1183067 1183772 1183388 N NA SBNO2,STK11 ATP5D,MIDN,SBNO2,STK11,GPX4 MCF7 ChIA-PET 22265404 SBNO2 8785 470 chr19 13842168 13844566 13842489 N NA CCDC130,MRI1,C19orf53 CACNA1A IMR90 Hi-C 24141950 CCDC130 14187 471 chr19 14485538 14487594 14486128 Y NA CD97,DDX39A DDX39A K562 ChIA-PET 22265404 CD97 4362 472 chr19 18201508 18203141 18202134 Y FCHO1,FCHO1,JAK3,UBA52,LRRC25,IFI30,FKBP8,ELL,ARRDC2,ARRDC2,IL12RB1 IL12RB1,MAST3 MAST3 K562 ChIA-PET 22265404 IL12RB1 3811 473 chr19 28564925 28566319 28565876 N NA NA NA NA NA NA LOC148189 280077 474 chr19 34624927 34626676 34625433 N NA LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 36676 475 chr19 36192159 36195658 36193446 Y USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33 ZBTB32,MLL4,IGFLR1,U2AF1L4,LIN37 MLL4,ZBTB32 K562 ChIA-PET 22265404 ZBTB32 8172 476 chr19 37707573 37712555 37708862 N NA ZNF585A,ZNF383 ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF383 4811 477 chr19 37806553 37811037 37808731 N NA HKR1 NA NA NA NA HKR1 14543 478 chr19 42027532 42028851 42028338 Y NA NA CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 53680 479 chr19 42034986 42038908 42037997,42036386 Y,N CCDC97,TGFB1,B9D2,TMEM91,CEACAM4,CEACAM21,ARHGEF1;NA CEACAM21 CEACAM21,LOC100505495 IMR90 Hi-C 24141950 CEACAM21 43623 480 chr19 42040793 42047234 42041825,42046644 N,N NA;NA CEACAM21 LOC100505495,B3GNT8,C19orf69,ATP5SL,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 35297 481 chr19 42055236 42060338 42059183,42055804 N,N NA;NA CEACAM21 LOC100505495,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 22193 482 chr19 42771047 42780907 42772590,42774582 Y,Y NA;CEACAM8,CEACAM3,ARHGEF1,ZNF574,POU2F2,DEDD2,ERF,CIC DEDD2,ZNF526,GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 CIC 7910 483 chr19 44711117 44713300 44711613 Y NA ZNF226,ZNF227 NA NA NA NA ZNF227 3391 484 chr19 45946056 45948501 45947053 Y GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB CD3EAP,PPP1R13L,ERCC1,FOSB ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ERCC1 18879 485 chr19 45953424 45955445 45953946 Y NA CD3EAP,PPP1R13L,ERCC1,FOSB,RTN2 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 15808 486 chr19 47363002 47367742 47363865,47365369 Y,N PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35;NA AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AP2S1 8799 487 chr19 48102622 48105299 48103728 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLTSCR1 6154 488 chr19 486087 491196 489517 N NA TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 TPGS1 16301 489 chr19 50871726 50873525 50872397 N NA KCNC3,NAPSB,NR1H2,POLD1,SPIB NA NA NA NA NR1H2 6155 490 chr19 53398064 53401568 53400744 N NA ZNF468,ZNF320,ZNF321P ZNF468,ZNF160 IMR90 Hi-C 24141950 ZNF320 3465 491 chr19 56825047 56827507 56826388 N NA NA NA NA NA NA LOC386758 77538 492 chr19 7397799 7400149 7398699 N NA NA INSR,ZNF557 IMR90 Hi-C 24141950 ARHGEF18 59850 493 chr19 7409514 7412431 7409948 N NA ARHGEF18 ZNF557,INSR IMR90 Hi-C 24141950 ARHGEF18 47568 494 chr19 7413565 7415407 7414485 N NA ARHGEF18 ZNF557,INSR IMR90 Hi-C 24141950 ARHGEF18 44592 495 chr19 7769713 7771919 7770668 Y ARHGEF18,PEX11G,MCOLN1,PNPLA6,XAB2,LOC100131801,STXBP2,MAP2K7,C19orf59 C19orf59,TRAPPC5,FCER2 NA NA NA NA FCER2 2681 496 chr19 9895795 9897595 9896915 N NA FBXL12,UBL5,PIN1 NA NA NA NA FBXL12 32136 497 chr2 111367607 111369822 111368032 N NA NA NA NA NA NA BUB1 65862 498 chr2 112389600 112390819 112390455 Y NA NA ACOXL,BCL2L11 IMR90 Hi-C 24141950 TMEM87B 421981 499 chr2 113562470 113564428 113563057 N NA CKAP2L CKAP2L IMR90 Hi-C 24141950 CKAP2L 40216 500 chr2 118943391 118944569 118943988 N NA NA NA NA NA NA INSIG2 97341 501 chr2 12006046 12007995 12007078 N NA NA LOC100506474,TRIB2 IMR90 Hi-C 24141950 LPIN1 119306 502 chr2 128143609 128148629 128145441 N NA MAP3K2 CYP27C1,IWS1 IMR90 Hi-C 24141950 MAP3K2 42804 503 chr2 132439384 132441713 132440032 N NA C2orf27A NA NA NA NA C2orf27A 38351 504 chr2 133026259 133032092 133029565,133026681 N,N NA;NA ANKRD30BL GPR39,CEP68,STAMBP,NRXN1,KCNIP3,ADCY3,EML4,DDX1,MIR4778,STARD7,TGOLN2,MAP3K2,RNU4ATAC,GCC2,CNNM3,LHCGR,LOC100189589,CLASP1,GMCL1,SULT6B1,ANKRD20A8P,MRPS9,NMS,RHOQ,CAPG,DGUOK,SMYD5,MPHOSPH10,ARID5A,HAAO,RMND5A,LOC440905,LIMS2,FOXN2,GPAT2,CIB4,LOC100216479,FEZ2,LOC729121,TTC7A,RTKN,CDKL4,POLR2D,LOC339803,EMILIN1,LYG1,MYCNOS,STEAP3,FAM49A,CKAP2L,EFR3B,OTOF,HK2,CNGA3,GEMIN6,ALK,SPR,LOC440895,IL18RAP,LOC375190,PTRHD1,C2orf81,MATN3,PEX13,FABP1,NPHP1,FAM161A,DDX18,ADRA2B,KRCC1,BIRC6,CCDC74B,C2orf49,THNSL2,ST3GAL5,NAT8B,ERCC3,CCDC88A,QPCT,LOC100506123,TLX2,REG1A,LOC284950,CHCHD5,SMC6,LOC254128,PNPT1,DBI,LOC100505716,LOC285103,TMSB10,RAD51AP2,MGAT4A,PLEKHH2,ELMOD3,PKDCC,GALM,GLI2,LIMS3-LOC440895,RPL31,ASXL2,LOC100132215,SMEK2,FBLN7,EPT1,SRSF7,DUSP2,CYP4F30P,LOC100131320,LOC388948,ATOH8,GCFC2,ACTR2,C2orf27B,IWS1,GPR17,MTIF2,LBX2,POU3F3,SUPT7L,SPDYA,TEKT4,ANKRD39,WDR54,RAB1A,IL36A,FAM123C,LOC285000,REV1,GPR148,MRPL33,EPB41L5,RPS27A,CEBPZ,EHBP1,RALB,APOB,DUSP11,LOC400958,CRIPT,CYP1B1-AS1,CHAC2,GFPT1,NPAS2,PTCD3,LOC389023,TRIM54,SFXN5,MALL,NT5C1B-RDH14,LOC100507334,POLE4,C2orf18,IL1A,C2orf73,CD8A,ATL2,LOC654342,UNC50,ITPRIPL1,HADHB,IL1R1,ZFP36L2,MAP4K3,FIGLA,LOC440900,ZNF512,POTEE,PDCL3,ABCG8,CCDC142,MYADML,MIR4783,PCBP1-AS1,PFN4,LOC150568,SEMA4F,TMEM177,LOC401010,MRPL19,GCKR,TTC32,GGCX,LOC151009,THUMPD2,LOC728537,IL36B,PCDP1,VAMP5,LRRTM4,SF3B14,SULT1C2,RGPD4,MCEE,AAK1,SFTPB,SLC5A7,SCTR,ACTR1B,CIAO1,DNAJC5G,SIX3,SERTAD2,PIGF,CD8B,GGT8P,SLC9A2,NFU1,SNAR-H,POTEKP,VWA3B,SH3RF3,FAHD2B,UBXN2A,LOC284998,MEIS1,FAM98A,LOC90784,LAPTM4A,CCDC104,LOC100499194,MAPRE3,PPP1R21,ANXA4,LOC440910,LOC100506421,FAM84A,GKN2,TMEM185B,RASGRP3,ABHD1,AFF3,CRIM1,MOGS,BOLA3,DNAJC27,MZT2B,MAL,NRBP1,UXS1,PRKD3,SOCS5,FLJ30838,TTC31,RNF103-CHMP3,HADHA,MIR4435-1,NOTO,RPL23AP7,C1QL2,CHMP3,RNF149,AUP1,TBC1D8,AGBL5,GYPC,MSH6,LOC728730,VPS54,EIF5B,GALNT14,PLEK,GEN1,LOC100505876,MIR4432,VAMP8,ST6GAL2,C2orf91,KIAA1841,MORN2,LOC100128590,IL1RL2,BMP10,EIF2B4,ARHGEF4,REG3A,SULT1C3,ADD2,TSN,IFT172,TSGA10,HNRPLL,DPY30,LGALSL,ZNF2,ZNF638,IMP4,CCDC138,INSIG2,ACOXL,FBXO41,DYSF,C2orf51,TMEM214,TMEM127,ALMS1P,CDC42EP3,MZT2A,TMEM150A,EGR4,FOXI3,C2orf16,FOSL2,OR7E91P,UGGT1,TMEM87B,TXNDC9,NBAS,CREG2,RGPD6,ABCG5,PUM2,RNF181,LINC00116,LOC646743,MIR4757,C2orf78,MRPL35,LOC541471,INHBB,RHOB,LOC388942,STON1-GTF2A1L,DCTN1,CCDC115,LOC100129726,KCNS3,UNQ6975,ZAP70,NAGK,C2orf53,MIR4436A,C2orf76,THADA,VRK2,SLC5A6,RABL2A,CCDC75,PLEKHB2,MXD1,ANKRD36BP2,REG1P,MIR217,C2orf63,ASTL,WDR33,NLRC4,XPO1,RETSAT,TUBA3E,TRIM43B,CAMKMT,BCL2L11,PUS10,PAIP2B,RPIA,SH2D6,PCBP1,USP39,REG3G,FSHR,MYCN,SEMA4C,ANKRD23,C1D,IL1R2,MKI67IP,MOB1A,LOC389043,ACTR3BP2,EPCAM,MAT2A,PCGF1,RGPD2,BIN1,KANSL3,LOC100287010,LOXL3,CD207,DPYSL5,VAX2,PPP1CB,POLR1A,LOC644838,BCL11A,SULT1C4,ANKRD36,DBIL5P2,B3GNT2,LINC00309,ARHGEF33,ANKRD30BL,TFCP2L1,C2orf89,IL1F10,OTX1,PPM1B,GKN1,ANTXR1,FKBP1B,ATP6V1B1,CCT7,CCDC74A,TEX261,MTA3,MFSD9,COX5B,RGPD1,FOXD4L1,FLJ42351,EFEMP1,SLC30A6,FAM168B,GDF7,NEURL3,TUBA3D,POLR1B,USP34,MSH2,MFSD2B,EXOC6B,RANBP2,LRRTM1,LOC100286979,C2orf84,KCNK12,MIR4267,CAD,FAM138B,SPRED2,HTRA2,ACTG2,AHSA2,SLC30A3,RBKS,NCK2,MIR548AD,FLJ16341,TRMT61B,SLC1A4,PROKR1,ATAD2B,LOC100630918,LCLAT1,CAPN14,LMAN2L,C2orf65,CTNNA2,SRD5A2,MIR4265,CCT4,INPP4A,SLC20A1,COX7A2L,SNRNP27,TMEM178,MIR4266,SULT1C2P1,MIR4436B1,MRPS5,IMMT,ALMS1,CYP27C1,HS6ST1,LOC728819,WTH3DI,CHST10,LOC375196,SMPD4,OSR1,PAPOLG,KRTCAP3,EPAS1,MDH1,C2orf74,IL18R1,LOC1720,CCDC164,LOC285074,VIT,PLGLB2,C2orf61,LONRF2,CCDC85A,UCN,C2orf28,DQX1,FAM178B,CENPA,MRPL30,MERTK,TCF23,DNAJC27-AS1,FAM176A,IL36G,IL1B,LIPT1,ZNF513,COA5,CLEC4F,PPP3R1,BRE,C2orf15,RAB6C,DOK1,PLGLA,GPR45,MIR4780,TMEM131,CBWD2,TSPYL6,LOC388946,CLIP4,C2orf42,SNRPG,LOC654433,LOC100505624,PTPN18,C2orf71,POMC,EML6,KIF3C,WASH2P,LOC150776,GTF3C2,WDR43,MEMO1,ETAA1,TRIM43,MRPL53,CAPN13,MIR4264,TIA1,SPTBN1,CENPO,C2orf55,FLJ12334,HS1BP3,COMMD1,IL1RN,LOC285033,ANKRD36B,LOC440894,PRADC1,C2orf68,TCF7L1,TMEM37,ATP6V1E2,SIX2,REG1B,CYP26B1,PREPL,WDR35,PAX8,OST4,CGREF1,PELI1,REL,POTEF,ZC3H8,KLHL29,DHX57,C2orf40,CNTNAP5,C2orf44,TGFBRAP1,PRKCE,LRPPRC,SLC35F5,FBXO48,GPR113,SUCLG1,LOC100288911,NCAPH,WDR92,TACR1,MARCO,MIR216A,CALM2,BUB1,ANKRD53,SLC4A1AP,DDX11L2,LOC100134259,FANCL,ACYP2,ITSN2,DNMT3A,PROM2,LYG2,LOC100287216,GPR75-ASB3,PCYOX1,MAP4K4,PNO1,LOC151534,YIPF4,PREB,ANAPC1,EMX1,REEP1,GPN1,PRORSD1P,ZNF514,WDPCP,KDM3A,NAT8,KCMF1,YPEL5,C2orf27A,LIMS1,EDAR,DYNC2LI1,LOC339807,SEPT10,FUNDC2P2,EHD3,SLC9A4,RAB10,FAM179A,HEATR5B,IL37,OXER1,SOWAHC,AFTPH,LOC389033,LOC729234,DNAH6,TET3,SMYD1,RGPD8,UGP2,LOC442028,STRN,CFC1B,LTBP1,FNDC4,MIR3682,MYO7B,ZC3H6,SNX17,TGFA,C2orf56,TPRKB,TMEM17,SAP130,FBXO11,AMMECR1L,RFX8,EIF2AK3,GNLY,PLB1,MSGN1,SLC3A1,TMEM182,C2orf29,LINC00486,FAM59B,PTPN4,CNNM4,RTN4,ACTR3,MITD1,LOC645949,IL1RL1,PPM1G,ASB3,INO80B-WBP1,CNRIP1,XDH,LBH,IL36RN,SLC8A1,PROC,LINC00152,KHK,EN1,NCOA1,FAM82A1,KCNK3,FAM136A,FER1L5,PSD4,SNORD89,SLC4A5,MPV17,SDC1,SPAST,VSNL1,ERLEC1,MIR216B,SRBD1,APLF,CCDC93,LOC84931,CCDC121,C2orf43,SFT2D3,DTNB,RGPD3,TTL,FHL2,LOC100133985,SOS1,TP53I3,RAB11FIP5,ARHGAP25,MTHFD2,BOLA3-AS1,KCNG3,EIF2AK2,DPP10,CYP1B1,C2orf70,TTC27,SNRNP200,PSME4,FAHD2A,MCFD2 IMR90 Hi-C 24141950 ANKRD30BL 10717 505 chr2 134876795 134881466 134878014 N NA NA NA NA NA NA MGAT5 130364 506 chr2 13662577 13664222 13663442 N NA NA NA NA NA NA LPIN1 1775837 507 chr2 136809090 136811452 136810171 Y UBXN4,MCM6,DARS NA NA NA NA NA CXCR4 64273 508 chr2 136962983 136966120 136964650 N NA NA NA NA NA NA CXCR4 87258 509 chr2 136970850 136971392 136971027 N NA NA NA NA NA NA CXCR4 95125 510 chr2 137011885 137012572 137012220 N NA NA NA NA NA NA CXCR4 136160 511 chr2 137132872 137134231 137133103 N NA NA NA NA NA NA CXCR4 257147 512 chr2 149371727 149372908 149372128 Y EPC2 EPC2 KIF5C IMR90 Hi-C 24141950 EPC2 29652 513 chr2 152622589 152624166 152623305 N NA NA ARL5A K562 ChIA-PET 22265404 ARL5A 60843 514 chr2 152626913 152629351 152628423,152628607 N,N NA;NA NA ARL5A,NEB K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARL5A 55658 515 chr2 157197214 157200878 157198658 N NA NR4A2 GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NR4A2 7927 516 chr2 157257280 157257858 157257731 N NA GPD2 NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GPD2 34107 517 chr2 158309203 158310837 158310111 Y CYTIP CYTIP NA NA NA NA CYTIP 8599 518 chr2 158324861 158328215 158326262 Y CYTIP CYTIP NA NA NA NA CYTIP 24257 519 chr2 158337027 158337699 158337426 Y ACVR1C CYTIP ACVR1C,UPP2 IMR90 Hi-C 24141950 CYTIP 36423 520 chr2 161932925 161935343 161934054 Y TANK,TANK NA ITGB6 IMR90 Hi-C 24141950 TANK 58123 521 chr2 161949975 161952065 161951636 N NA TANK TANK,ITGB6,RBMS1 IMR90 Hi-C 24141950 TANK 41401 522 chr2 161959607 161962300 161960460 N NA TANK RBMS1,PLA2R1,ITGB6 IMR90 Hi-C 24141950 TANK 31166 523 chr2 178029805 178030331 178030112 N NA HNRNPA3 HOXD-AS2,LOC100130691,AGPS,PDE11A,NFE2L2,HNRNPA3,TTC30A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNRNPA3 47091 524 chr2 182176315 182179376 182177433,182178695 Y,N ITGA4;NA NA NA NA NA NA ITGA4 142243 525 chr2 191586094 191589079 191587263 N NA NA TMEM194B,STAT1,NAB1 IMR90 Hi-C 24141950 NAB1 72246 526 chr2 196425631 196427264 196426676 Y NA NA SLC39A10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC39A10 94268 527 chr2 197040351 197041882 197041066 N NA STK17B NA NA NA NA STK17B 4015 528 chr2 20546786 20552041 20550300 N NA PUM2 HS1BP3,PUM2 IMR90 Hi-C 24141950 PUM2 19642 529 chr2 20724190 20725715 20724934 N NA NA HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOB 77355 530 chr2 20794322 20796195 20795592 N NA NA HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 54669 531 chr2 208174928 208177457 208176370 Y CREB1,CCNYL1 NA KLF7,CREB1 IMR90 Hi-C 24141950 KLF7 144314 532 chr2 208198782 208200958 208199336 Y KLF7 NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 168168 533 chr2 213595159 213596502 213595978 N NA NA IKZF2 IMR90 Hi-C 24141950 IKZF2 419831 534 chr2 214097009 214098818 214098064 Y IKZF2,IKZF2 NA NA NA NA NA IKZF2 80676 535 chr2 220549453 220550425 220549963 N NA NA INHA,OBSL1,SLC4A3,STK11IP,EPHA4,DES,SPEG,GMPPA,ACCN4 IMR90,HELA,K562,GM12878,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 STK11IP 86857 536 chr2 225502685 225504889 225503123 N NA NA FAM124B,SERPINE2,CUL3 IMR90 Hi-C 24141950 CUL3 52575 537 chr2 231520867 231525007 231523788 N NA NA CAB39 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CAB39 52550 538 chr2 231806739 231814151 231809060,231812934 N,Y NA;GPR55 GPR55 ITM2C,LOC151484,GPR55,LOC348761,SPATA3,CAB39,C2orf72 IMR90 Hi-C 24141950 GPR55 16798 539 chr2 231818002 231820210 231818354 N NA GPR55 LOC151484,GPR55,ITM2C,SPATA3,LOC348761,C2orf72 IMR90 Hi-C 24141950 GPR55 28061 540 chr2 231821159 231823529 231822070 N NA GPR55 NA NA NA NA GPR55 31218 541 chr2 232345436 232349630 232348608 N NA NCL NA NA NA NA NCL 16231 542 chr2 232418725 232420402 232419652 N NA NA NCL,SNORD20,SNORA75,NMUR1,LINC00471 IMR90 Hi-C 24141950 NCL 89520 543 chr2 232530143 232532935 232531259 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 40300 544 chr2 232534920 232538777 232537070 N NA PTMA COPS7B,PTMA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTMA 34458 545 chr2 232544263 232547033 232545819 Y COPS7B PTMA PTMA,PDE6D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTMA 26202 546 chr2 237445668 237446901 237446095 N NA CXCR7 IQCA1,CXCR7 IMR90 Hi-C 24141950 CXCR7 31479 547 chr2 237453105 237456467 237454725 N NA CXCR7 IQCA1,CXCR7 IMR90 Hi-C 24141950 CXCR7 21913 548 chr2 243152615 243154574 243152991 N NA NA NA NA NA NA LOC728323 121771 549 chr2 25432029 25432748 25432377 N NA POMC,DNMT3A NA NA NA NA POMC 40470 550 chr2 26250849 26252497 26251040 N NA RAB10 RAB10 MCF7 ChIA-PET 22265404 RAB10 4232 551 chr2 30559454 30560901 30560038 Y YPEL5 NA LCLAT1,LBH IMR90 Hi-C 24141950 LBH 105057 552 chr2 37550363 37553331 37552008 N NA PRKD3 QPCT,FAM82A1,PRKD3,EIF2AK2,C2orf56 IMR90 Hi-C 24141950 PRKD3 6141 553 chr2 37776092 37777394 37777069 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 121932 554 chr2 37797040 37800287 37798775 N NA NA CDC42EP3,QPCT IMR90 Hi-C 24141950 CDC42EP3 99039 555 chr2 37812241 37814530 37812863 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 84796 556 chr2 38151358 38153444 38152540 N NA NA CDC42EP3,PRKG2,CYP1B1-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 CYP1B1 149879 557 chr2 38322982 38324201 38323655 Y CDC42EP3,CYP1B1 CYP1B1 CYP1B1,FAM82A1,CYP1B1-AS1,HNRPLL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CYP1B1 19659 558 chr2 38488130 38490395 38489878 N NA NA FAM82A1,CYP1B1-AS1,CYP1B1 IMR90 Hi-C 24141950 ATL2 114037 559 chr2 39350606 39352699 39351500 N NA SOS1 NA NA NA NA SOS1 3002 560 chr2 42254854 42256489 42256036 N NA PKDCC LOC388942,C2orf91,PKDCC,EML4 IMR90 Hi-C 24141950 PKDCC 18672 561 chr2 42325953 42331134 42329296 Y NA NA EML4 IMR90 Hi-C 24141950 PKDCC 50792 562 chr2 42332289 42334588 42333078 Y EML4 NA EML4,LOC388942 IMR90 Hi-C 24141950 PKDCC 57128 563 chr2 42359997 42360665 42360397 Y EML4 EML4 EML4,COX7A2L,LOC388942 IMR90 Hi-C 24141950 EML4 35825 564 chr2 43036065 43039696 43037958 Y NA OXER1,HAAO THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HAAO 16314 565 chr2 43401314 43402673 43401662 Y OXER1,THADA,THADA,ZFP36L2 NA ZFP36L2,THADA,LOC100129726 K562,MCF7 ChIA-PET 22265404 ZFP36L2 51072 566 chr2 55360195 55362498 55361099 Y SMEK2,CCDC88A,RTN4 NA RTN4,C2orf63,EML6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RTN4 82461 567 chr2 61934645 61936587 61935260 Y NA NA USP34,XPO1,FAM161A IMR90 Hi-C 24141950 XPO1 169227 568 chr2 62530148 62538860 62531791,62536931 N,Y NA;NA NA COMMD1 IMR90 Hi-C 24141950 B3GNT2 106886 569 chr2 62560862 62562438 62561919 N NA NA COMMD1,B3GNT2 IMR90 Hi-C 24141950 B3GNT2 137600 570 chr2 64438754 64441822 64441070 N NA NA LINC00309,PELI1 IMR90 Hi-C 24141950 PELI1 67149 571 chr2 64454985 64456086 64455423 N NA NA PELI1 IMR90 Hi-C 24141950 PELI1 83380 572 chr2 64553568 64556533 64555581 N NA NA PELI1,AFTPH,LINC00309 IMR90 Hi-C 24141950 LGALSL 124794 573 chr2 6485531 6486732 6485919 N NA NA LINC00487 IMR90 Hi-C 24141950 CMPK2 519218 574 chr2 64994206 64996246 64995135 Y SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2 NA SERTAD2,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 113160 575 chr2 65163753 65165693 65164800 N NA LOC400958,SLC1A4 LOC400958,SLC1A4,CEP68,SERTAD2 IMR90 Hi-C 24141950 LOC400958 4172 576 chr2 65172527 65174782 65173574 Y AFTPH,SERTAD2 LOC400958,SLC1A4 SERTAD2,AFTPH,LOC339807,LOC400958,SLC1A4,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC400958 12946 577 chr2 65662717 65663666 65663231 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 3061 578 chr2 71290282 71292109 71291746 N NA NAGK NA NA NA NA NAGK 3299 579 chr2 74207385 74240524 74212352,74210790,74208621 N,N,N NA;NA;NA TET3 DGUOK,TET3,C2orf78,STAMBP,BOLA3,MOB1A,MTHFD2,BOLA3-AS1,ACTG2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 TET3 32926 580 chr2 74258857 74260573 74259645 N NA TET3 TET3,ACTG2,BOLA3 IMR90 Hi-C 24141950 TET3 12877 581 chr2 74408765 74409597 74408950 Y NAT8B,TET3,MOBKL1B BOLA3,BOLA3-AS1,MOB1A,MTHFD2 SLC4A5 IMR90 Hi-C 24141950 MOB1A 2770 582 chr2 74411893 74414470 74412936 N NA BOLA3,BOLA3-AS1,MOB1A,MTHFD2 SLC4A5,MOB1A,BOLA3,BOLA3-AS1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MOB1A 5898 583 chr2 75659453 75660542 75660076 N NA NA TACR1 IMR90 Hi-C 24141950 MRPL19 213367 584 chr2 85165183 85167894 85166960 Y KCMF1,C2orf89 KCMF1 NA NA NA NA KCMF1 30337 585 chr2 85171917 85174793 85173381 Y TMSB10 KCMF1 KCMF1,TMSB10 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KCMF1 23438 586 chr2 85644705 85647561 85645785 N NA NA ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 ELMOD3 62862 587 chr2 8655272 8656560 8655939 N NA NA LOC100506274,LINC00299,ID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ID2 165553 588 chr2 89136717 89139075 89137836 Y EIF2AK3 NA NA NA NA NA RPIA 145541 589 chr2 89143633 89147369 89144355,89145575 N,Y NA;EIF2AK3 NA NA NA NA NA RPIA 152457 590 chr2 89151039 89159500 89152592,89157866 Y,N EIF2AK3;NA NA NA NA NA NA RPIA 159863 591 chr2 89165018 89167030 89165829 N NA NA NA NA NA NA RPIA 173842 592 chr2 89168029 89169007 89168796 N NA NA NA NA NA NA RPIA 176853 593 chr2 89326641 89327888 89327325 N NA NA NA NA NA NA RPIA 335465 594 chr2 89441947 89444135 89442659 N NA NA NA NA NA NA RPIA 450771 595 chr2 95872771 95874659 95873360 N NA ZNF514,ZNF2 ZNF2 MCF7 ChIA-PET 22265404 ZNF2 41588 596 chr2 96190830 96193727 96192613 N NA NA NA NA NA NA FAHD2A 122382 597 chr2 96656800 96658666 96657755 N NA LOC729234 NA NA NA NA LOC729234 17633 598 chr2 96821574 96826169 96823694,96825188,96821926 Y,N,N TMEM127,KIAA1310,ARID5A,ASTL,DUSP2;NA;NA ADRA2B,ASTL,DUSP2,LOC285033,STARD7 ASTL,DUSP2,STARD7,LOC285033,ADRA2B,SNRNP200,TMEM127,CIAO1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP2 10395 599 chr2 96986451 96988746 96987704 N NA SNRNP200,ITPRIPL1,NCAPH SNRNP200 MCF7 ChIA-PET 22265404 ITPRIPL1 2316 600 chr2 97196679 97198361 97197502 N NA NEURL3,ARID5A LOC285033,ITPRIPL1,NCAPH,NEURL3,KANSL3,FER1L5,CNNM4,SNRNP200,LMAN2L IMR90 Hi-C 24141950 ARID5A 4103 601 chr20 2187208 2188574 2188092 N NA NA PDYN,TGM3 IMR90 Hi-C 24141950 STK35 104680 602 chr20 23127832 23129362 23128873 N NA NA CD93,THBD K562 ChIA-PET 22265404 NXT1 202011 603 chr20 31260153 31261843 31261190 N NA NA C20orf112,COMMD7,DNMT3B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 COMMD7 69971 604 chr20 34355397 34356559 34356202 Y SPAG4,CPNE1,RBM39,SCAND1,PHF20 RBM39,PHF20 NA NA NA NA PHF20 3364 605 chr20 35905000 35906736 35905537 Y SAMHD1,SRC,MANBAL MANBAL RPN2,NNAT,BLCAP,MANBAL,GHRH,SRC,LOC100287792,VSTM2L,TTI1,RPRD1B IMR90 Hi-C 24141950 MANBAL 11315 606 chr20 38441314 38442857 38441966 N NA NA NA NA NA NA DHX35 850333 607 chr20 39945508 39947939 39946160 N NA NA ZHX3,IQGAP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 PLCG1 179347 608 chr20 4004271 4005291 4004645 N NA RNF24 CDC25B,PANK2,MIR103B2,RNF24,SMOX,HSPA12B,CENPB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNF24 8055 609 chr20 42380503 42382714 42381281 Y C20orf111 NA TOX2 IMR90 Hi-C 24141950 MYBL2 84794 610 chr20 45317068 45318936 45318342 N NA NA SLC13A3,SLC2A10,C20orf123,EYA2,NCOA3 IMR90 Hi-C 24141950 ZNF334 174874 611 chr20 46065965 46069505 46067846 Y NCOA3 NA NCOA3,ZMYND8 IMR90 Hi-C 24141950 NCOA3 61096 612 chr20 46096640 46099176 46097205 Y NA NCOA3 NCOA3,ZMYND8,EYA2,LOC100131496 IMR90 Hi-C 24141950 NCOA3 31425 613 chr20 46100785 46104956 46102216 N NA NCOA3 NCOA3,ZMYND8,EYA2 IMR90 Hi-C 24141950 NCOA3 25645 614 chr20 47116373 47117775 47117196 N NA NA SULF2 IMR90 Hi-C 24141950 LINC00494 127719 615 chr20 47462776 47463909 47463491 Y ZNFX1 PREX1 PREX1 IMR90 Hi-C 24141950 PREX1 18356 616 chr20 48781895 48783956 48782904 N NA UBE2V1,TMEM189-UBE2V1,CEBPB TMEM189-UBE2V1,SNAI1,RNF114,UBE2V1,PTPN1,CEBPB IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM189-UBE2V1 11560 617 chr20 52207604 52211981 52209778 N NA ZNF217 SUMO1P1,BCAS1,CSRNP3,BMP7,SULF2,ZMYND8,CYP24A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323,22265404 ZNF217 7968 618 chr20 52239484 52241217 52239990 N NA ZNF217 SUMO1P1,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 39848 619 chr20 52259327 52261141 52259879 N NA NA SUMO1P1,BCAS1 IMR90 Hi-C 24141950 ZNF217 59691 620 chr20 52355935 52356382 52356058 N NA NA ZNF217,BCAS1 IMR90 Hi-C 24141950 ZNF217 156299 621 chr20 52367291 52368562 52367518 N NA NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF217 167655 622 chr20 52509932 52511655 52510572 N NA NA ZNF217,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 310296 623 chr20 52515235 52516959 52516421 Y ZNF217 NA ZNF217,BMP7,SUMO1P1,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFDN4 307543 624 chr20 52521918 52530121 52523702,52525119 Y,N ZNF217;NA NA SUMO1P1,ZNF217,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFDN4 294381 625 chr20 5625969 5632121 5627087 N NA GPCPD1 GPCPD1,C20orf196,TRMT6 IMR90 Hi-C 24141950 GPCPD1 34297 626 chr20 61076504 61079150 61077091 Y DPH3P1,OGFR,DIDO1 NA NA NA NA NA CABLES2 94165 627 chr20 62461343 62462459 62461859 N NA TPD52L2 PTK6,SLC2A4RG,ZBTB46,TPD52L2,DNAJC5,ABHD16B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPD52L2 34122 628 chr21 15825257 15828117 15826559 N NA NA NA NA NA NA HSPA13 69748 629 chr21 16057182 16061385 16059615,16060646 N,N NA;NA NA NA NA NA NA HSPA13 301673 630 chr21 26734324 26735302 26735058 N NA NA NA NA NA NA MIR155HG 199155 631 chr21 26828338 26830011 26829386 N NA NA MIR155HG IMR90 Hi-C 24141950 MIR155HG 104446 632 chr21 26834048 26838092 26835030,26836898 Y,N MRPL39;NA NA MIR155HG IMR90 Hi-C 24141950 MIR155HG 96365 633 chr21 26858377 26860267 26859611 Y NA NA NA NA NA NA MIR155HG 74190 634 chr21 34587689 34589789 34588929 Y SON,IL10RB,IFNGR2,IFNAR1,GART,GART,SYNJ1,SYNJ1,IFNAR2 IFNAR2,IL10RB IFNAR2,IL10RB,LOC100288432,TMEM50B,IFNGR2 IMR90,GM12878 Hi-C,5C 24141950,22955621 IFNAR2 12442 635 chr21 34753815 34757004 34755643 Y IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2 IFNGR2 IFNGR2 MCF7 ChIA-PET 22265404 IFNGR2 18198 636 chr21 38933588 38937216 38936204 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 193729 637 chr21 44584311 44586672 44585071 Y NA NA HSF2BP,LINC00313,U2AF1 IMR90 Hi-C 24141950 U2AF1 56623 638 chr21 44774668 44776495 44775706 N NA NA HSF2BP,SIK1,LINC00319 IMR90 Hi-C 24141950 SIK1 70507 639 chr21 45615337 45618374 45616294 Y PDXK,TRAPPC10,TRPM2,ICOSLG ICOSLG AIRE,PFKL,ICOSLG,C21orf33,PWP2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ICOSLG 42460 640 chr22 22452388 22454088 22453165 N NA NA LOC96610,VPREB1 IMR90 Hi-C 24141950 TOP3B 115241 641 chr22 22522273 22523140 22522813 N NA NA VPREB1,LOC96610 IMR90 Hi-C 24141950 LOC96610 129323 642 chr22 23269792 23272218 23270923 Y NA IGLL5 MIR650 IMR90 Hi-C 24141950 IGLL5 39832 643 chr22 23272729 23274690 23273521 N NA IGLL5 MIR650,IGLL5,GNAZ,RTDR1 IMR90 Hi-C 24141950 IGLL5 42769 644 chr22 25798703 25801029 25799890 N NA LRP5L,CRYBB2P1 SEZ6L,CRYBB2P1,LRP5L,ADRBK2,MYO18B IMR90 Hi-C 24141950 LRP5L 21159 645 chr22 29597112 29599642 29598748 N NA EMID1 NA NA NA NA EMID1 2311 646 chr22 35523471 35524267 35523992 N NA NA NA NA NA NA HMGXB4 129178 647 chr22 41047390 41049337 41048161 Y EP300,MKL1 MKL1 ST13,MKL1,MCHR1,ADSL,SLC25A17,DNAJB7,XPNPEP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 14700 648 chr22 42833388 42836829 42834061 N NA NFAM1 WBP2NL,TCF20,LOC388906,SERHL,MEI1,LOC100132273,NFAM1 IMR90 Hi-C 24141950 NFAM1 4987 649 chr22 42839944 42844636 42840473 N NA NFAM1 MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3,FAM109B,NAGA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAM1 11543 650 chr22 43164407 43167699 43165817 Y NFAM1,ARFGAP3 A4GALT ARFGAP3,PACSIN2,CYB5R3,TTLL1 IMR90 Hi-C 24141950 A4GALT 47531 651 chr22 46956320 46959312 46957618 Y NA NA TRMU,CELSR1,GRAMD4,TBC1D22A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CERK 174840 652 chr3 105895046 105896163 105895588 N NA NA NA NA NA NA CBLB 307159 653 chr3 105972848 105976694 105975337 Y NA NA NA NA NA NA CBLB 384961 654 chr3 107842753 107845921 107844289 N NA CD47 CD47,IFT57,MYH15 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD47 32818 655 chr3 126700230 126702722 126701260 Y NA PLXNA1 CHCHD6,PLXNA1 MCF7,K562 ChIA-PET 22265404 PLXNA1 4715 656 chr3 127554542 127556032 127555360 N NA MGLL MCM2,PODXL2 IMR90 Hi-C 24141950 MGLL 12449 657 chr3 128397778 128401992 128399660 N NA RPN1,RAB7A RAB7A,RPN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPN1 28059 658 chr3 13493093 13493841 13493394 Y NA NUP210 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NUP210 31284 659 chr3 138542712 138545286 138544323 N NA NA PIK3CB IMR90 Hi-C 24141950 MRPS22 517575 660 chr3 138552055 138554864 138553826 N NA NA PIK3CB IMR90 Hi-C 24141950 MRPS22 507997 661 chr3 142888785 142890536 142890216 N NA NA SLC9A9 IMR90 Hi-C 24141950 CHST2 50167 662 chr3 150103213 150104348 150103446 N NA TSC22D2 PFN2,RNF13,TSC22D2,SERP1,EIF2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 22440 663 chr3 152212907 152215713 152213329,152214630 N,N NA;NA NA NA NA NA NA LOC401093 225492 664 chr3 152222367 152225123 152223878 Y NA NA NA NA NA NA LOC401093 234952 665 chr3 152229266 152230548 152229983 N NA NA NA NA NA NA LOC401093 241851 666 chr3 156891420 156895291 156892876 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 12938 667 chr3 16561444 16562816 16562403 N NA RFTN1 RFTN1,OXNAD1,ANKRD28 IMR90 Hi-C 24141950 RFTN1 6222 668 chr3 172467616 172469357 172468450 N NA ECT2 NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 2941 669 chr3 177075783 177077184 177076171 Y TBL1XR1 NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 160735 670 chr3 178198048 178200179 178198845 N NA NA KCNMB2 IMR90 Hi-C 24141950 ZMAT3 589477 671 chr3 178232253 178236374 178233297 N NA NA KCNMB2 IMR90 Hi-C 24141950 ZMAT3 553282 672 chr3 181649276 181650867 181650081 N NA NA NA NA NA NA ATP11B 860424 673 chr3 186229907 186230989 186230605 N NA NA DGKG,LOC344887,LOC253573 IMR90 Hi-C 24141950 TBCCD1 57343 674 chr3 18690650 18692764 18691494 Y NA NA NA NA NA NA TBC1D5 906410 675 chr3 189284748 189286392 189285740 N NA NA TPRG1,TP63 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LEPREL1 553834 676 chr3 195360939 195374217 195361929 N NA SDHAP2 NA NA NA NA SDHAP2 10693 677 chr3 195823051 195824754 195823691 N NA TFRC LOC401109,TFRC,PCYT1A,LRRC33 IMR90 Hi-C 24141950 TFRC 14019 678 chr3 195841937 195843280 195842922 N NA TFRC TFRC,LRRC33,LOC401109,RNF168,C3orf43 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TFRC 32905 679 chr3 196358551 196361928 196359605,196361183 N,N NA;NA LRRC33 FBXO45,SENP5,C3orf43,PAK2,LRRC33,CEP19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC33 4728 680 chr3 197120659 197122455 197121642 Y DLG1 NA DLG1,LOC100507086,BDH1 IMR90 Hi-C 24141950 DLG1 95212 681 chr3 197182602 197184194 197183514 N NA NA BDH1,DLG1,LOC100507086 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLG1 157155 682 chr3 23694988 23697054 23695409 N NA NA UBE2E2,UBE2E1,RPL15,NKIRAS1 IMR90 Hi-C 24141950 UBE2E1 150330 683 chr3 27524538 27525502 27524743 Y NA NA NA NA NA NA CMC1 757622 684 chr3 31271131 31271602 31271207 N NA NA NA NA NA NA STT3B 302889 685 chr3 31273242 31275184 31274214 N NA NA NA NA NA NA STT3B 299307 686 chr3 31282418 31283380 31283306 N NA NA NA NA NA NA STT3B 291111 687 chr3 31286020 31291497 31290817,31286677 N,N NA;NA NA GADL1 IMR90 Hi-C 24141950 STT3B 282994 688 chr3 42053670 42057450 42054701 N NA NA TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 75296 689 chr3 44086512 44088115 44087084 N NA NA FAM198A IMR90 Hi-C 24141950 ABHD5 354137 690 chr3 44536326 44538458 44538308 N NA ZNF445 C3orf77,ZNF445 IMR90 Hi-C 24141950 ZNF445 17164 691 chr3 44550488 44553174 44552171 N NA ZNF445,ZNF167 ZNF445 K562 ChIA-PET 22265404 ZNF445 31326 692 chr3 45905751 45906822 45906339 N NA LZTFL1 CCR9,CCR2,LZTFL1,SLC6A20 IMR90 Hi-C 24141950 LZTFL1 22130 693 chr3 5047412 5050162 5048682 N NA BHLHE40 NA NA NA NA BHLHE40 26315 694 chr3 5067615 5069534 5068254 Y EDEM1,ARL8B,BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 46518 695 chr3 73159604 73160708 73159937 Y EBLN2 NA PDZRN3,CACNA1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 113485 696 chr3 75228726 75230492 75229880 Y NA NA NA NA NA NA FAM86DP 253774 697 chr3 76581071 76588047 76586674,76582918,76584155 N,N,N NA;NA;NA NA NA NA NA NA ZNF717 746816 698 chr3 81865130 81866746 81866093 N NA NA NA NA NA NA GBE1 54180 699 chr3 96335910 96336951 96336043 N NA NA NA NA NA NA MINA 1354344 700 chr3 98331216 98332901 98332308 N NA CPOX NA NA NA NA CPOX 18761 701 chr3 98361308 98362110 98361684 N NA CPOX NA NA NA NA CPOX 48853 702 chr3 99136310 99138599 99137455 N NA NA MIR548G,COL8A1 IMR90 Hi-C 24141950 ST3GAL6 684738 703 chr3 99223990 99225611 99224915 N NA NA MIR548G,COL8A1 IMR90 Hi-C 24141950 TBC1D23 754075 704 chr4 106226450 106228153 106227830 N NA NA NA NA NA NA TET2 158608 705 chr4 10732787 10735492 10734227 N NA NA NA NA NA NA ZNF518B 273755 706 chr4 119389696 119390455 119389846 N NA NA NA NA NA NA SNHG8 189779 707 chr4 119511669 119515079 119512820 N NA NA NA NA NA NA METTL14 91495 708 chr4 123072026 123074337 123073471 N NA NA KIAA1109 K562 ChIA-PET 22265404 CCNA2 326938 709 chr4 129473806 129474830 129474526 N NA NA PGRMC2,PHF17,LARP1B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF17 255949 710 chr4 140078796 140080155 140079229 N NA ELF2 CCRN4L,ELF2,NAA15,NDUFC1,C4orf49 IMR90 Hi-C 24141950 ELF2 18190 711 chr4 140096612 140100839 140098528 N NA ELF2 ELF2,NAA15,C4orf49 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ELF2 36006 712 chr4 160023119 160027969 160025817,160024183 N,N NA;NA NA C4orf45,FNIP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAPGEF2 161029 713 chr4 185186045 185189876 185187187,185189161 Y,N IRF2,CASP3;NA NA IRF2,CASP3,LOC728175,CCDC111,MLF1IP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC728175 85254 714 chr4 185204875 185206221 185205945 N NA NA IRF2,CCDC111,MLF1IP,LOC728175,CASP3 IMR90 Hi-C 24141950 LOC728175 68909 715 chr4 185207858 185209579 185208905 N NA NA IRF2,CCDC111,MLF1IP,LOC728175,CASP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC728175 65551 716 chr4 185231519 185236613 185235510 Y NA LOC728175 IRF2,LOC728175 IMR90 Hi-C 24141950 LOC728175 38517 717 chr4 185237707 185240504 185239834 N NA LOC728175 IRF2,LOC728175,CASP3 IMR90 Hi-C 24141950 LOC728175 34626 718 chr4 185454768 185460310 185455871,185458888 Y,N IRF2;NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 59042 719 chr4 190655402 190656696 190656201 N NA NA NA NA NA NA FRG1 205278 720 chr4 190801192 190802810 190802535 N NA NA NA NA NA NA FRG1 59164 721 chr4 2787938 2789763 2788836 Y NA TNIP2,SH3BP2 SH3BP2,NOP14-AS1,MFSD10 MCF7,K562 ChIA-PET 22265404 SH3BP2 4987 722 chr4 36257198 36259315 36258146 N NA ARAP2 ARAP2 MCF7 ChIA-PET 22265404 ARAP2 11219 723 chr4 38178522 38180162 38178840 N NA NA TBC1D1,KLF3,FLJ13197,FAM114A1,TLR6,TLR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBC1D1 285817 724 chr4 38524304 38526483 38525762 N NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 139307 725 chr4 38530769 38532716 38531321 N NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 133074 726 chr4 40186575 40188433 40187795 N NA RHOH RHOH IMR90 Hi-C 24141950 RHOH 10094 727 chr4 40309293 40312754 40309655,40311683 N,N NA;NA NA RBM47,N4BP2,RHOH,LOC344967,NSUN7,CHRNA9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RHOH 110766 728 chr4 40674172 40675538 40674656 Y RBM47 RBM47 RBM47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM47 42289 729 chr4 45121907 45122830 45122381 N NA NA NA NA NA NA GNPDA2 393295 730 chr4 4764120 4766099 4764803 N NA NA LOC100507266,STX18 IMR90 Hi-C 24141950 MSX1 95293 731 chr4 54506040 54508197 54507058 N NA NA LNX1,FIP1L1,SCFD2 IMR90 Hi-C 24141950 FIP1L1 262220 732 chr5 102089138 102093242 102091630 N NA NA NA NA NA NA PAM 108285 733 chr5 116099242 116099713 116099687 N NA NA NA NA NA NA SEMA6A 188691 734 chr5 124270395 124272883 124271770 Y NA NA ZNF608 IMR90 Hi-C 24141950 ZNF608 189590 735 chr5 124286740 124289369 124287867 N NA NA NA NA NA NA ZNF608 205935 736 chr5 124340536 124342851 124342163 N NA NA NA NA NA NA ZNF608 259731 737 chr5 124746866 124748396 124747591 N NA NA ZNF608 IMR90 Hi-C 24141950 ZNF608 666061 738 chr5 126097383 126101727 126098094 N NA LMNB1 LMNB1 K562 ChIA-PET 22265404 LMNB1 10588 739 chr5 126921133 126922816 126922178 N NA NA FBN2 IMR90 Hi-C 24141950 PRRC1 67824 740 chr5 130587842 130590999 130588657 N NA CDC42SE2 CDC42SE2 IMR90 Hi-C 24141950 CDC42SE2 8703 741 chr5 131438240 131438631 131438254 N NA NA PDLIM4,IL3 IMR90 Hi-C 24141950 P4HA2 124925 742 chr5 133265127 133266595 133265921 N NA C5orf15 NA NA NA NA C5orf15 37811 743 chr5 133434084 133441392 133436514,133440004 N,N NA;NA TCF7 TCF7,SKP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TCF7 9010 744 chr5 138897090 138900039 138897705 Y MATR3,MATR3,DNAJC18,PSD2 TMEM173,UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 34747 745 chr5 138922892 138923443 138923190 N NA UBE2D2 SPATA24,DNAJC18,ECSCR,TMEM173,UBE2D2 IMR90 Hi-C 24141950 UBE2D2 17308 746 chr5 139126606 139127637 139127322 N NA NA DNAJC18,UBE2D2,CXXC5 IMR90 Hi-C 24141950 CXXC5 98305 747 chr5 139486377 139488944 139487505 N NA PURA NRG2,CYSTM1,IGIP IMR90 Hi-C 24141950 PURA 4764 748 chr5 142630199 142631591 142631097 N NA NA NA NA NA NA NR3C1 183486 749 chr5 149865016 149867202 149865584 N NA RPS14,NDST1 NDST1,RBM22,MYOZ3,SYNPO IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDST1 20472 750 chr5 159884944 159887589 159886393 Y SLU7 SLU7,PTTG1 MIR3142 IMR90 Hi-C 24141950 PTTG1 36079 751 chr5 172233402 172235103 172234393 Y NA DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ERGIC1 26120 752 chr5 173249440 173250320 173249730 N NA NA BOD1,CPEB4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CPEB4 65011 753 chr5 178955842 178958060 178957716 N NA RUFY1 NA NA NA NA RUFY1 19502 754 chr5 18697818 18699063 18698400 Y NA NA NA NA NA NA BASP1 1480068 755 chr5 21340663 21343030 21342061 N NA NA NA NA NA NA GUSBP1 116559 756 chr5 34244079 34246245 34245043 N NA NA NA NA NA NA AMACR 235859 757 chr5 34585197 34586927 34585885 Y RAI14,RAI14 NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 69506 758 chr5 5017684 5019715 5018588 N NA NA NA NA NA NA KIAA0947 403092 759 chr5 55883953 55885790 55884961 N NA NA MAP3K1,SETD9 IMR90,HELA Hi-C,5C 24141950,22955621 MAP3K1 225110 760 chr5 64398008 64399869 64398970 Y NA NA ADAMTS6,CWC27,PPWD1,CENPK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SREK1IP1 333512 761 chr5 67728421 67731309 67730138 N NA NA PIK3R1 IMR90 Hi-C 24141950 PIK3R1 216837 762 chr5 69139236 69143166 69140376 N NA NA NA NA NA NA SERF1A 177906 763 chr5 69696173 69699925 69697126 N NA GTF2H2B NA NA NA NA GTF2H2B 11272 764 chr5 70014349 70018645 70015488 N NA NA NA NA NA NA SERF1A 177845 765 chr5 78022660 78025317 78023938 Y NA NA ARSB,SCAMP1,LHFPL2 IMR90 Hi-C 24141950 LHFPL2 78012 766 chr5 88566713 88569358 88567471 Y NA NA MEF2C IMR90 Hi-C 24141950 MEF2C 366791 767 chr5 88574807 88579504 88575497,88578205 N,N NA;NA NA NA NA NA NA MEF2C 374885 768 chr5 88596756 88599585 88598175 N NA NA MEF2C IMR90 Hi-C 24141950 MEF2C 396834 769 chr5 88603847 88605564 88604831 N NA NA NA NA NA NA MEF2C 403925 770 chr5 88616026 88617840 88616442 N NA NA NA NA NA NA MEF2C 416104 771 chr5 88638949 88640474 88639617 N NA NA NA NA NA NA MEF2C 439027 772 chr5 88731296 88732668 88731955 N NA NA NA NA NA NA MEF2C 531374 773 chr5 90574949 90577294 90576337 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 98870 774 chr5 99389451 99390173 99389692 N NA NA NA NA NA NA ST8SIA4 848814 775 chr6 105900857 105902450 105901391 N NA PREP ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 49858 776 chr6 105906437 105908533 105907159 Y NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 55438 777 chr6 106048481 106049971 106049587 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PREP 197482 778 chr6 113885459 113886767 113886036 Y MARCKS NA FLJ34503,MARCKS IMR90 Hi-C 24141950 MARCKS 291760 779 chr6 113951683 113954421 113953174 N NA NA MARCKS,FLJ34503,LOC285758,HDAC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MARCKS 224106 780 chr6 113963258 113967920 113964452,113966724 N,N NA;NA NA MARCKS,FLJ34503,LOC285758,HDAC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MARCKS 210607 781 chr6 113969912 113973081 113971174,113972420 N,N NA;NA NA MARCKS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MARCKS 205446 782 chr6 114076066 114078664 114077243 N NA NA LAMA4 IMR90 Hi-C 24141950 MARCKS 99863 783 chr6 11460106 11462008 11461316 N NA NA NEDD9,C6orf228,ERVFRD-1 IMR90 Hi-C 24141950 NEDD9 77525 784 chr6 11785622 11787097 11786247 N NA NA HIVEP1,ADTRP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIVEP1 225627 785 chr6 11876442 11878059 11877400 Y TMEM170B NA ADTRP,TMEM170B,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 134665 786 chr6 12007760 12010285 12009004 N NA HIVEP1 EDN1,ADTRP,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 2439 787 chr6 130581473 130583633 130582008 N NA NA NA NA NA NA ARHGAP18 550103 788 chr6 130584245 130586019 130584601 N NA NA NA NA NA NA ARHGAP18 552875 789 chr6 130591043 130592123 130591264 N NA NA NA NA NA NA ARHGAP18 559673 790 chr6 134693825 134694327 134694118 N NA NA ALDH8A1,LOC154092,SGK1 IMR90 Hi-C 24141950 TBPL1 420517 791 chr6 135407990 135409911 135409129 N NA HBS1L HBS1L,AHI1,MYB K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 HBS1L 31954 792 chr6 135436297 135436847 135436545 N NA NA AHI1 IMR90 Hi-C 24141950 HBS1L 60261 793 chr6 135483236 135483631 135483416 N NA MYB AHI1,MYB IMR90 Hi-C 24141950 MYB 18822 794 chr6 137422687 137425035 137424204 Y NA NA IL20RA IMR90 Hi-C 24141950 IFNGR1 115532 795 chr6 138249115 138249720 138249670 N NA NA IFNGR1,TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 60534 796 chr6 14093880 14095059 14094552 Y CD83 NA JARID2,DTNBP1,CCDC90A,RNF182,CD83 IMR90 Hi-C 24141950 CCDC90A 279088 797 chr6 14108940 14111857 14109450 Y CD83 NA RNF182,CD83 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC90A 294148 798 chr6 14210322 14212715 14211308 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC90A 395530 799 chr6 14276111 14278480 14277366 Y CD83 NA JARID2,DTNBP1 IMR90 Hi-C 24141950 CCDC90A 461319 800 chr6 144536049 144538025 144537486 Y NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 STX11 64395 801 chr6 14728582 14730477 14730010 Y NA NA DTNBP1,JARID2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 516050 802 chr6 14910825 14911786 14911284 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 334741 803 chr6 149533044 149535138 149534364 N NA NA NA NA NA NA TAB2 104298 804 chr6 154927173 154928543 154927639 Y SCAF8 NA NA NA NA NA SCAF8 125969 805 chr6 157007230 157009796 157008390 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 89268 806 chr6 157017396 157021456 157018550,157020327 N,N NA;NA NA ARID1B,MIR4466 IMR90 Hi-C 24141950 ARID1B 77608 807 chr6 157039285 157044568 157041212 Y ARID1B NA ARID1B,MIR4466 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ARID1B 54496 808 chr6 158183733 158185325 158185055 N NA NA SNX9,TMEM242,ZDHHC14,SYNJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SNX9 58969 809 chr6 158652030 158656315 158653043,158653202 N,N NA;NA NA TULP4,TMEM181,DYNLT1,SYTL3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SYNJ2 249142 810 chr6 15901104 15902560 15901720 N NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 226757 811 chr6 16218542 16220553 16219212 N NA NA GMPR,JARID2,DTNBP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MYLIP 89225 812 chr6 167505040 167509140 167508101 N NA CCR6 NA NA NA NA CCR6 16155 813 chr6 16836158 16837580 16836985 N NA NA ATXN1,FLJ23152 IMR90 Hi-C 24141950 ATXN1 74437 814 chr6 188330 190669 189862 N NA NA IRF4,EXOC2,DUSP22 IMR90 Hi-C 24141950 DUSP22 101432 815 chr6 193096 194923 194339 N NA NA IRF4,EXOC2,DUSP22 IMR90 Hi-C 24141950 DUSP22 97178 816 chr6 20320000 20320589 20320338 N NA NA E2F3 IMR90 Hi-C 24141950 E2F3 81548 817 chr6 21587859 21589761 21588735 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 4211 818 chr6 219515 222001 221102 N NA NA EXOC2,DUSP22,IRF4 IMR90 Hi-C 24141950 DUSP22 70100 819 chr6 225813 228897 227217 Y NA NA EXOC2,IRF4,DUSP22 IMR90 Hi-C 24141950 DUSP22 63204 820 chr6 24948560 24950324 24949494 N NA FAM65B FAM65B IMR90 Hi-C 24141950 FAM65B 37365 821 chr6 26304999 26305912 26305573 N NA NA HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 59486 822 chr6 26571707 26572829 26572119 N NA HCG11,HMGN4,ABT1 BTN2A1,LOC285819,ABT1,HIST1H2AE,HIST1H2BG,HCG11,HIST1H2BD,HIST1H1E,HMGN4,HIST1H2BF,HIST1H3D,HIST1H4E,HIST1H2BK,HIST1H4I K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ABT1 24342 823 chr6 27181346 27182303 27181685 N NA NA OR2B2,PRSS16,ZNF184 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIST1H2BK 66709 824 chr6 27445837 27447785 27446804 Y NA ZNF184 ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF184 4940 825 chr6 27573159 27573765 27573504 N NA NA PRSS16,LOC100507173 IMR90 Hi-C 24141950 LOC100507173 88049 826 chr6 27638886 27641275 27640400 N NA LOC100507173 ZNF391,PRSS16 IMR90 Hi-C 24141950 LOC100507173 20539 827 chr6 27647634 27649587 27648803 N NA LOC100507173 NA NA NA NA LOC100507173 12227 828 chr6 27655278 27656856 27655967 Y NA LOC100507173 LOC100507173,ZNF184 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 LOC100507173 4958 829 chr6 27720045 27721459 27721155 N NA LOC100131289 HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,HIST1H2AH,MIR3143,LOC100131289,POM121L2,ZNF184,LOC100507173,HIST1H2AM,HIST1H2BO,HIST1H3I,HIST1H4L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100131289 8064 830 chr6 286664 287924 287379 N NA DUSP22 DUSP22 MCF7 ChIA-PET 22265404 DUSP22 4177 831 chr6 28908268 28909576 28909129 N NA TRIM27 TRIM27,LOC401242,ZNF311 IMR90 Hi-C 24141950 TRIM27 16500 832 chr6 30483270 30485381 30484220 N NA HLA-E,PRR3,GNL1 HLA-E,PPP1R10,MRPS18B,ABCF1,PRR3,GNL1 MCF7,K562 ChIA-PET 22265404 HLA-E 26087 833 chr6 3067997 3071614 3069144 N NA RIPK1,BPHL LOC100507194,WRNIP1 K562 ChIA-PET 22265404 RIPK1 5444 834 chr6 32440002 32442300 32441472 N NA HLA-DRA HLA-DRB1 IMR90 Hi-C 24141950 HLA-DRA 32383 835 chr6 32571407 32579657 32572423,32575651,32577713,32578760 Y,N,Y,N GPSM3,HLA-DRA,HLA-DRB5,TAP2,PSMB9,PSMB8,PSMB8,HLA-DQB2,HLA-DQA2,HLA-DPB1,HLA-DPA1,HLA-DOB,HLA-DOA,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DRB1,HLA-DQB1;NA;GPSM3,HLA-DRA,HLA-DRB5,TAP2,TAP1,PSMB9,PSMB8,PSMB8,HLA-DQB2,HLA-DQA2,HLA-DPB1,HLA-DPA1,HLA-DOB,HLA-DOA,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DRB1,HLA-DQB1,HLA-DQA1;NA HLA-DRB6,HLA-DRB1,HLA-DQA1 NA NA NA NA HLA-DRB1 13794 836 chr6 32588778 32591962 32590657 N NA HLA-DRB1,HLA-DQA1,HLA-DQB1 NA NA NA NA HLA-DQA1 13221 837 chr6 32985703 32988288 32986916 Y HLA-DRB5,HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,TAP2,PSMB8,PSMB8,TAP1,PSMB9,TAPBP,PHF1,HLA-DPB1,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DOA BRD2,HLA-DOA HLA-DPB1,HLA-DPA1,HLA-DPB2,COL11A2,VPS52 IMR90 Hi-C 24141950 HLA-DOA 8314 838 chr6 32994830 32998887 32997486,32996202 Y,N HLA-DRB5,HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,TAP2,PSMB8,PSMB8,TAP1,PSMB9,TAPBP,PHF1,HLA-DPB1,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DOA;NA HLA-DOA,HLA-DPB1,HLA-DPA1 HLA-DPB2,VPS52,HLA-DPB1,BRD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HLA-DOA 17441 839 chr6 34191551 34192462 34191937 Y C6orf1,HMGA1 HMGA1,C6orf1 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 HMGA1 12115 840 chr6 35699175 35701012 35699717 N NA FKBP5 ARMC12 MCF7 ChIA-PET 22265404 FKBP5 2815 841 chr6 36634184 36636631 36634926 Y MTCH1,CDKN1A,CDKN1A,CDKN1A,CDKN1A CDKN1A CDKN1A,SRSF3,MIR3925,CPNE5,PPIL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN1A 7606 842 chr6 37017192 37020198 37017684 N NA FGD2 CPNE5,C6orf89,FGD2,PIM1,TMEM217,TBC1D22B IMR90 Hi-C 24141950 FGD2 43769 843 chr6 37122233 37123948 37123359 Y FGD2 PIM1 CPNE5,PPIL1,C6orf89,FGD2,PIM1,TMEM217 IMR90 Hi-C 24141950 PIM1 13974 844 chr6 37529021 37532512 37530768 N NA NA CCDC167,TBC1D22B,RNF8,FTSJD2,MIR4462,MDGA1,ZFAND3,BTBD9 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CCDC167 61321 845 chr6 41286187 41287990 41286925 N NA NA C6orf130 K562 ChIA-PET 22265404 TREML2 117262 846 chr6 41498997 41501306 41499958 N NA FOXP4 FOXP4 IMR90,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 FOXP4 12858 847 chr6 42738355 42741227 42738916 Y CUL9,TRERF1,UBR2,TBCC,CNPY3,C6orf226 TBCC,KIAA0240 KIAA0240,GUCA1A,UBR2,ATP6V0CP3,PRPH2,RPL7L1,TBCC,C6orf226,TRERF1,PTCRA,PPP2R5D,KLHDC3,MEA1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TBCC 24471 848 chr6 42742312 42744467 42742901 N NA TBCC,KIAA0240 KIAA0240,UBR2,RPL7L1,C6orf226,PTCRA,TBCC,PRPH2,KLHDC3,MEA1,PPP2R5D IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBCC 28428 849 chr6 42748985 42755355 42750748 N NA TBCC,KIAA0240 KIAA0240,UBR2,RPL7L1,PTCRA,KLHDC3,MEA1,PPP2R5D,PRPH2,TBCC,ATP6V0CP3,C6orf226 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0240 33439 850 chr6 43350306 43353003 43351908 N NA ZNF318,ABCC10 TJAP1,TTBK1,DLK2,POLH,SLC22A7,ABCC10,C6orf108,CUL9,YIPF3,LRRC73,POLR1C,CRIP3,ZNF318,XPO5 IMR90 Hi-C 24141950 ZNF318 13125 851 chr6 43360645 43362799 43361760 N NA ZNF318,ABCC10 TJAP1,TTBK1,DLK2,POLH,SLC22A7,ABCC10,CRIP3,CUL9,ZNF318,XPO5,C6orf108,LRRC73,YIPF3,POLR1C IMR90 Hi-C 24141950 ZNF318 23464 852 chr6 44026128 44027375 44026966 Y NFKBIE,MAD2L1BP NA RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C6orf223 57791 853 chr6 44040447 44042180 44041316 N NA NA POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,MRPS18A,HSP90AB1,XPO5,C6orf223,CAPN11,TMEM63B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL14 53011 854 chr6 53223274 53224919 53224335 Y NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 9297 855 chr6 53412151 53414023 53413014 Y GCLC GCLC NA NA NA NA GCLC 2224 856 chr6 64344575 64347486 64345869 N NA PHF3 PHF3,EYS,PTP4A1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF3 8945 857 chr6 6683886 6685260 6684875 N NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 LY86 94952 858 chr6 6810420 6812054 6811276 N NA NA RREB1 IMR90 Hi-C 24141950 LY86 221486 859 chr6 6855345 6858336 6856946 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 249494 860 chr6 7050955 7052773 7051555 N NA NA RREB1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RREB1 55057 861 chr6 7087346 7088214 7088002 N NA RREB1 NA NA NA NA RREB1 19616 862 chr6 710139 711624 711202 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 17030 863 chr6 80254588 80255131 80254793 N NA NA LCA5,SH3BGRL2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HMGN3 310133 864 chr6 87861372 87862585 87862151 N NA ZNF292 NA NA NA NA ZNF292 2684 865 chr6 88434705 88435885 88435286 Y AKIRIN2 AKIRIN2-AS1,AKIRIN2 AKIRIN2-AS1,AKIRIN2 K562 ChIA-PET 22265404 AKIRIN2 22720 866 chr6 88441017 88443486 88441769 Y AKIRIN2 AKIRIN2-AS1,AKIRIN2 AKIRIN2,AKIRIN2-AS1 K562,MCF7 ChIA-PET 22265404 AKIRIN2 29032 867 chr6 88534499 88536385 88535320 N NA NA NA NA NA NA AKIRIN2 122514 868 chr6 9520390 9521461 9520979 N NA NA LOC100130275,TFAP2A,LINC00518 IMR90 Hi-C 24141950 LOC100130275 891090 869 chr7 100764884 100767082 100765628 Y TRIM56,SERPINE1 TRIM56,AP1S1 NA NA NA NA AP1S1 30604 870 chr7 100894495 100896540 100895775 N NA ZNHIT1,PLOD3,CLDN15,FIS1 NA NA NA NA FIS1 6124 871 chr7 102154796 102156875 102155662 N NA ALKBH4,LRWD1,POLR2J NA NA NA NA POLR2J 35415 872 chr7 102328348 102330606 102329881 N NA POLR2J2 NA NA NA NA POLR2J2 16172 873 chr7 104583117 104587651 104584776 Y MLL5 NA LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100216545 66937 874 chr7 106064352 106066315 106065701 Y NA NA NAMPT,CCDC71L IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAMPT 138714 875 chr7 128167462 128172958 128171284,128171967 Y,N NA;NA NA METTL2B,IMPDH1,HILPDA IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 METTL2B 50679 876 chr7 138802789 138803421 138803165 Y UBN2,ZC3HAV1 ZC3HAV1 KIAA1549,ZC3HAV1L,ZC3HAV1,TTC26,LUC7L2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZC3HAV1 8324 877 chr7 148096 150858 149234 N NA NA FAM20C IMR90 Hi-C 24141950 PDGFA 408623 878 chr7 148636964 148638766 148638327 Y NA NA EZH2,CUL1,ZNF786,ZNF398,ZNF425 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EZH2 55523 879 chr7 152271984 152273884 152272475 N NA NA LOC100128822,XRCC2,FABP5P3,MLL3 MCF7 ChIA-PET 22265404 MLL3 138894 880 chr7 154996455 154999269 154997971 N NA NA INSIG1,LOC202781,PAXIP1 K562 ChIA-PET 22265404 INSIG1 90217 881 chr7 156735113 156738156 156735806 N NA LMBR1,NOM1 LMBR1,NOM1 K562,MCF7 ChIA-PET 22265404 NOM1 4261 882 chr7 17108221 17109671 17109009 Y AHR NA AHR IMR90 Hi-C 24141950 AHR 228605 883 chr7 20276551 20278619 20277882 N NA MACC1 MACC1 K562 ChIA-PET 22265404 MACC1 19538 884 chr7 20279190 20280586 20280144 N NA MACC1 MACC1 K562 ChIA-PET 22265404 MACC1 22177 885 chr7 23512964 23514967 23514071 Y NUPL2,C7orf30,IGF2BP3 IGF2BP3 MALSU1 K562 ChIA-PET 22265404 IGF2BP3 2969 886 chr7 26006814 26007995 26007665 N NA NA NA NA NA NA NFE2L3 183852 887 chr7 26140595 26141959 26141039 Y SNX10,SNX10,SNX10,HNRNPA2B1 NFE2L3 NA NA NA NA NFE2L3 49888 888 chr7 26437379 26439666 26438399 N NA NA LOC441204 MCF7,K562 ChIA-PET 22265404 SNX10 105864 889 chr7 2902505 2904324 2903479 Y LFNG,LFNG,TTYH3,GNA12 GNA12 GNA12 MCF7 ChIA-PET 22265404 GNA12 18546 890 chr7 3106729 3107874 3107322 N NA CARD11 SDK1,CARD11 IMR90 Hi-C 24141950 CARD11 23220 891 chr7 3117593 3119450 3118272 N NA CARD11 SDK1 IMR90 Hi-C 24141950 CARD11 34084 892 chr7 35764007 35771031 35764837,35769047 N,Y NA;HERPUD2 HERPUD2 SEPT7 IMR90 Hi-C 24141950 HERPUD2 29235 893 chr7 38350223 38351936 38350958 N NA NA LOC100506776 IMR90 Hi-C 24141950 STARD3NL 132415 894 chr7 43774221 43775135 43774572 N NA C7orf44,BLVRA C7orf44,BLVRA K562 ChIA-PET 22265404 C7orf44 5138 895 chr7 45482735 45483658 45483067 N NA NA NA NA NA NA ADCY1 130467 896 chr7 45484440 45486587 45486103 N NA NA NA NA NA NA ADCY1 127538 897 chr7 50320707 50322755 50321771 Y NA IKZF1 NA NA NA NA IKZF1 21623 898 chr7 5594078 5595826 5594960 Y WIPI2 FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 23846 899 chr7 6120133 6122631 6121181 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 21273 900 chr7 63767055 63768614 63767767 N NA NA NA NA NA NA ZNF680 254891 901 chr7 64464529 64468322 64467126 N NA CCT6P3 ZNF117,CCT6P3 MCF7 ChIA-PET 22265404 CCT6P3 30410 902 chr7 65956173 65960854 65958648 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 82644 903 chr7 66055237 66058141 66057359 N NA LOC493754,KCTD7 KCTD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC493754 11739 904 chr7 66145305 66151620 66147059 N NA NA KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 KCTD7 51437 905 chr7 73685876 73689357 73686766 N NA RFC2,CLIP2 RFC2,LAT2,CLIP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CLIP2 14448 906 chr7 74057322 74059436 74057784 Y LAT2 GTF2I GTF2I K562,MCF7 ChIA-PET 22265404 GTF2I 12594 907 chr7 75794975 75798808 75796030 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 117582 908 chr7 852572 854164 853035 N NA SUN1 SUN1 K562 ChIA-PET 22265404 SUN1 2088 909 chr7 90224233 90226974 90225667 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CLDN12 191585 910 chr8 101442783 101443934 101443285 N NA NA RNF19A,SPAG1,MIR4471 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNF19A 120456 911 chr8 101454801 101456379 101455489 Y PABPC1,SPAG1,SPAG1,RNF19A,RNF19A NA SPAG1 IMR90 Hi-C 24141950 ANKRD46 115633 912 chr8 101474955 101476936 101475468 N NA NA SPAG1,RNF19A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD46 95076 913 chr8 101485382 101487618 101486389 Y SPAG1,SPAG1,RNF19A NA SPAG1,RNF19A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD46 84394 914 chr8 101505291 101509822 101506945 Y YWHAZ,YWHAZ,SPAG1,RNF19A,RNF19A NA RNF19A,GRHL2,SPAG1,ANKRD46 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ANKRD46 62190 915 chr8 102121201 102122248 102121463 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 NA YWHAZ,ZNF706,FLJ42969 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 95712 916 chr8 102149068 102150385 102149618 Y PABPC1,YWHAZ,YWHAZ,YWHAZ,YWHAZ,ZNF706,ZNF706 NA YWHAZ,FLJ42969,ZNF706 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 67575 917 chr8 103547528 103548771 103548126 N NA NA UBR5,ODF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 119212 918 chr8 103897220 103897721 103897260 N NA AZIN1 KCNH5,AZIN1,ATP6V1C1 MCF7,IMR90,K562 ChIA-PET,Hi-C 19890323,24141950,22265404 AZIN1 20823 919 chr8 11336873 11343255 11337623,11341565 N,N NA;NA FAM167A,BLK C8orf12,BLK,FAM167A IMR90 Hi-C 24141950 BLK 8266 920 chr8 11734737 11736127 11735695 Y CTSB CTSB CTSB,BLK,FDFT1,FAM167A IMR90 Hi-C 24141950 CTSB 9091 921 chr8 11754355 11755948 11754920 Y CTSB CTSB CTSB,FAM167A,BLK,NEIL2,GATA4,FDFT1 IMR90 Hi-C 24141950 CTSB 28709 922 chr8 125184120 125184405 125184261 N NA NA TMEM65,FER1L6,FER1L6-AS1 IMR90 Hi-C 24141950 TRMT12 278643 923 chr8 126400092 126402183 126400760 Y NA TRIB1 TRIB1 MCF7 ChIA-PET 22265404 TRIB1 40380 924 chr8 126591539 126592834 126591880 N NA NA NSMCE2,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 148976 925 chr8 126613657 126614664 126614358 N NA NA NSMCE2,KIAA0196,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 171094 926 chr8 126619723 126621609 126620639 N NA NA NSMCE2,KIAA0196 IMR90 Hi-C 24141950 TRIB1 177160 927 chr8 126648615 126651427 126649882 Y TRIB1 NA NSMCE2,KIAA0196,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 206052 928 chr8 126710336 126711014 126710853 N NA NA NSMCE2,TRIB1,KIAA0196 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 267773 929 chr8 128207865 128210304 128209365 Y NA NA LOC727677,MYC IMR90 Hi-C 24141950 MYC 538011 930 chr8 128238390 128239517 128239120 N NA NA LOC727677,MYC,PVT1 IMR90 Hi-C 24141950 MYC 508798 931 chr8 128299730 128301427 128300679 N NA NA NA NA NA NA MYC 446888 932 chr8 128311832 128318028 128315198,128313939 Y,N NA;NA NA NA NA NA NA MYC 430287 933 chr8 128575367 128577841 128576233 N NA NA LOC727677 IMR90 Hi-C 24141950 MYC 170474 934 chr8 128579853 128581515 128580867 N NA NA LOC727677 IMR90 Hi-C 24141950 MYC 166800 935 chr8 130557286 130562118 130560145 Y NA NA NA NA NA NA FAM49B 466779 936 chr8 135842300 135845969 135844671 N NA NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFAT 117008 937 chr8 137529349 137529914 137529385 N NA NA NA NA NA NA ZFAT 1804057 938 chr8 141473681 141475434 141474683 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 TRAPPC9 5003 939 chr8 142098390 142100426 142099806 Y EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 38294 940 chr8 142400731 142403396 142402047 N NA PTP4A3 FLJ43860,PTP4A3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTP4A3 28611 941 chr8 142411729 142415320 142412565 Y DENND3,SLC45A4 PTP4A3 PTP4A3,FLJ43860 IMR90 Hi-C 24141950 PTP4A3 16687 942 chr8 145910443 145912722 145911410 N NA NA ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1,ZNF34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF251 68248 943 chr8 22829910 22833768 22832417 N NA NA BIN3,PEBP4,LOC254896,TNFRSF10B,RHOBTB2,C8orf58,KIAA1967 IMR90 Hi-C 24141950 LOC286059 91974 944 chr8 2511190 2512176 2511898 Y NA NA NA NA NA NA CLN8 799320 945 chr8 28257888 28260415 28259691 N NA ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 13911 946 chr8 29265280 29267712 29266753 N NA NA C8orf75,DUSP4,LOC286135,MIR3148,TMEM66,MIR548O2,LEPROTL1 IMR90 Hi-C 24141950 DUSP4 57013 947 chr8 29354970 29358307 29356812 N NA NA LOC286135,C8orf75,MIR3148,MIR548O2,TMEM66,DUSP4 IMR90 Hi-C 24141950 DUSP4 146703 948 chr8 29377384 29383465 29378497,29381422 N,Y NA;NA NA C8orf75,MIR3148,DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 169117 949 chr8 29385165 29389441 29387114 N NA NA C8orf75,DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 176898 950 chr8 29498391 29499432 29498807 N NA NA DUSP4,LOC286135,C8orf75,MIR3148 IMR90 Hi-C 24141950 DUSP4 290124 951 chr8 29631777 29633403 29632463 N NA NA C8orf75,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM66 307246 952 chr8 49426685 49428002 49427363 N NA NA SNAI2 IMR90 Hi-C 24141950 UBE2V2 505690 953 chr8 50163892 50164852 50164372 N NA NA NA NA NA NA UBE2V2 1242897 954 chr8 61563234 61566772 61564729,61566457 N,N NA;NA CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 24552 955 chr8 61815415 61817687 61816497 Y NA NA NA NA NA NA CHD7 224091 956 chr8 61821160 61826637 61824793,61822212 N,N NA;NA NA CHD7 IMR90 Hi-C 24141950 CHD7 229836 957 chr8 61828113 61830827 61829260 Y CHD7 NA NA NA NA NA CHD7 236789 958 chr8 61841411 61842861 61841949 Y CHD7 NA NA NA NA NA CHD7 250087 959 chr8 65774760 65778035 65776239 N NA NA NA NA NA NA BHLHE22 281965 960 chr8 66862923 66865408 66864179 Y RRS1,PDE7A NA PDE7A MCF7 ChIA-PET 22265404 PDE7A 108954 961 chr8 66893195 66894165 66893896 Y PDE7A NA DNAJC5B IMR90 Hi-C 24141950 PDE7A 139226 962 chr8 80802909 80804512 80803839 N NA NA HEY1,MRPS28 IMR90 Hi-C 24141950 HEY1 122811 963 chr8 8138372 8142713 8141699 N NA NA SGK223,CLDN23,MFHAS1 IMR90 Hi-C 24141950 FLJ10661 52280 964 chr8 82066050 82066956 82066549 N NA PAG1 PAG1 IMR90 Hi-C 24141950 PAG1 41747 965 chr8 8241261 8244997 8244124 N NA SGK223 NA NA NA NA SGK223 2004 966 chr8 8488834 8491485 8489631 N NA NA SGK223,MFHAS1,FLJ10661 IMR90 Hi-C 24141950 CLDN23 68181 967 chr8 8497103 8498476 8497420 N NA NA SGK223,FLJ10661 IMR90 Hi-C 24141950 CLDN23 61190 968 chr8 8609025 8611721 8610617 Y NA CLDN23 MFHAS1,ERI1,SGK223,FLJ10661,CLDN23 IMR90 Hi-C 24141950 CLDN23 49359 969 chr8 90742123 90742873 90742421 N NA RIPK2 DECR1,RIPK2,NBN IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RIPK2 27102 970 chr8 90848331 90850023 90849366 Y RIPK2,OSGIN2 NA OSGIN2,NBN,RIPK2,DECR1 IMR90 Hi-C 24141950 OSGIN2 64073 971 chr8 95002686 95004698 95003911 Y NA NA LINC00535,RBM12B,RAD54B,CDH17,GEM IMR90 Hi-C 24141950 PDP1 73603 972 chr8 96127220 96129354 96128096 N NA PLEKHF2 PLEKHF2,C8orf69,C8orf38,C8orf37,MIR3150A,LOC100616530 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PLEKHF2 16595 973 chr9 102014412 102017536 102015846 Y NA ALG2,SEC61B ALG2,SEC61B,NR4A3,LOC441461,STX17,ERP44,TEX10 IMR90 Hi-C 24141950 SEC61B 29842 974 chr9 103173341 103174795 103174041 Y NA NA C9orf30-TMEFF1,TEX10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TEX10 58082 975 chr9 123836098 123838829 123837251 N NA CNTRL CNTRL,TRAF1,MEGF9,FBXW2,C5,RAB14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CNTRL 11745 976 chr9 126079914 126081262 126080381 N NA STRBP STRBP IMR90 Hi-C 24141950 STRBP 49059 977 chr9 126100180 126103876 126102438 Y NA NA RC3H2,RABGAP1,MIR600HG,STRBP,CRB2,DENND1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STRBP 69325 978 chr9 126899191 126901718 126899948 N NA NA DENND1A,NEK6,PSMB7,LOC100129034 IMR90 Hi-C 24141950 NEK6 118167 979 chr9 126959078 126960710 126959736 Y DENND1A NA DENND1A,NEK6 IMR90 Hi-C 24141950 NEK6 59175 980 chr9 126961630 126963169 126962517 N NA NA DENND1A,NEK6,LOC100129034,PSMB7 IMR90 Hi-C 24141950 NEK6 56716 981 chr9 130769615 130771518 130770292 Y SLC25A25,NAIF1,DPM2,FAM102A FAM102A FAM102A,SLC25A25,NAIF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM102A 26803 982 chr9 130787747 130790766 130789022,130787828 N,N NA;NA FAM102A,NAIF1,SLC25A25 SLC25A25,NAIF1,FAM102A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAIF1 38833 983 chr9 132145087 132146611 132145981 Y FAM73B,C9orf106,USP20,USP20,TOR1B,C9orf78,ASB6 NA C9orf106,LOC100506190,IER5L,C9orf50,PPP2R4,CRAT IMR90,MCF7,K562,HELA Hi-C,ChIA-PET,5C 24141950,22265404,22955621 C9orf106 61792 984 chr9 132174093 132177821 132176068 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 73118 985 chr9 132222302 132223487 132222779 N NA LOC100506190 PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 27452 986 chr9 134246847 134249604 134248925 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 55873 987 chr9 134267893 134279720 134269768 N NA PRRC2B PRRC2B,NUP214,FAM78A,PPAPDC3,POMT1,UCK1 IMR90 Hi-C 24141950 PRRC2B 25757 988 chr9 1873992 1875903 1875696 N NA NA NA NA NA NA SMARCA2 139439 989 chr9 1878314 1880956 1879410 N NA NA NA NA NA NA SMARCA2 134386 990 chr9 19184074 19185196 19184449 Y PLIN2 NA HAUS6,ACER2,DENND4C,PLIN2 IMR90 Hi-C 24141950 PLIN2 56470 991 chr9 19229611 19233452 19231145 N NA NA DENND4C,PLIN2 IMR90 Hi-C 24141950 DENND4C 57297 992 chr9 1928946 1931825 1930057 N NA NA NA NA NA NA SMARCA2 83517 993 chr9 1937649 1939656 1938372 N NA NA NA NA NA NA SMARCA2 75686 994 chr9 36485062 36490217 36487851 N NA NA RNF38,MELK IMR90 Hi-C 24141950 MELK 82642 995 chr9 37401450 37405169 37403475 N NA GRHPR PAX5,LOC100506710,ZCCHC7,ZBTB5,GRHPR IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GRHPR 17538 996 chr9 37410110 37413171 37410894 N NA GRHPR PAX5,GRHPR,MIR4540,ZBTB5,ZCCHC7 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GRHPR 9536 997 chr9 38318152 38320096 38319258 N NA NA MCART1,SHB IMR90 Hi-C 24141950 ALDH1B1 72565 998 chr9 42250229 42255337 42251550 N NA NA NA NA NA NA FOXD4L2 461897 999 chr9 4464678 4466071 4465250 N NA SLC1A1 SLC1A1 IMR90 Hi-C 24141950 SLC1A1 24356 1000 chr9 45355118 45358391 45356594 N NA NA NA NA NA NA FAM27C 364882 1001 chr9 45437736 45440467 45438809,45439910 N,N NA;NA NA NA NA NA NA FAM27A 286562 1002 chr9 46210706 46212484 46211507 N NA NA NA NA NA NA FAM27A 483677 1003 chr9 5493643 5495059 5494243 Y KIAA1432,C9orf46,CD274 CD274,PDCD1LG2 NA NA NA NA PDCD1LG2 15486 1004 chr9 5608274 5609561 5608910 N NA KIAA1432 JAK2,RCL1 IMR90 Hi-C 24141950 KIAA1432 19558 1005 chr9 66454660 66460010 66456694 N NA NA NA NA NA NA FAM27B 1334179 1006 chr9 66552802 66555970 66553916 N NA NA NA NA NA NA FAM27B 1238219 1007 chr9 66698214 66700694 66699757 N NA NA NA NA NA NA FAM27B 1093495 1008 chr9 6679566 6684219 6681590,6682960 Y,N UHRF2,KDM4C;NA NA KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 73422 1009 chr9 6702975 6705874 6704264 N NA NA KDM4C MCF7 ChIA-PET 22265404 KDM4C 51767 1010 chr9 6715041 6717629 6716285 N NA KDM4C KDM4C MCF7 ChIA-PET 22265404 KDM4C 40012 1011 chr9 6749834 6752708 6750828 N NA KDM4C KDM4C K562 ChIA-PET 22265404 KDM4C 4933 1012 chr9 68376635 68378228 68377624 N NA NA NA NA NA NA LOC642236 76147 1013 chr9 69881209 69883691 69882756 N NA NA NA NA NA NA FOXD4L5 295124 1014 chr9 70645839 70650138 70646416 N NA NA NA NA NA NA CBWD3 206701 1015 chr9 71258362 71259961 71258956 N NA NA PIP5K1B IMR90 Hi-C 24141950 PIP5K1B 60655 1016 chr9 71268269 71268923 71268671 N NA NA PIP5K1B IMR90 Hi-C 24141950 PIP5K1B 51693 1017 chr9 73033600 73035834 73034617 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 4027 1018 chr9 75087682 75089350 75088642 Y ZFAND5 NA TMC1,ZFAND5 IMR90 Hi-C 24141950 ZFAND5 107519 1019 chr9 75746625 75747747 75747353 Y ANXA1 NA ANXA1 IMR90 Hi-C 24141950 ZFAND5 766462 1020 chr9 90078065 90079279 90078772 N NA DAPK1 DAPK1 IMR90 Hi-C 24141950 DAPK1 33477 1021 chr9 92111141 92113051 92112593 N NA SEMA4D SEMA4D IMR90 Hi-C 24141950 SEMA4D 16530 1022 chrX 102659135 102660285 102659667 N NA NA NGFRAP1 MCF7 ChIA-PET 22265404 BEX2 93161 1023 chrX 106917392 106921915 106917918,106920082 Y,Y TSC22D3,TSC22D3;TSC22D3,TSC22D3 PRPS1 TSC22D3,PRPS1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PRPS1 45738 1024 chrX 109025854 109027468 109026511 N NA ACSL4 ACSL4 IMR90 Hi-C 24141950 ACSL4 49233 1025 chrX 114959564 115005821 114982757 N NA NA NA NA NA NA PLS3 164387 1026 chrX 115125387 115126795 115126365 N NA NA NA NA NA NA PLS3 330210 1027 chrX 11756746 11757846 11757152 N NA MSL3 NA NA NA NA MSL3 18432 1028 chrX 122898495 122900069 122899197 N NA THOC2 NA NA NA NA THOC2 31591 1029 chrX 125605688 125607371 125606800 Y NA NA NA NA NA NA STAG2 2511213 1030 chrX 12967042 12969318 12968433 Y TMSB4X,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 23908 1031 chrX 13016544 13019060 13017717 Y TLR7,TMSB4X TMSB4X NA NA NA NA TMSB4X 23318 1032 chrX 13099088 13101850 13099962 Y TLR7,TLR8,TMSB4X NA TMSB4X MCF7 ChIA-PET 22265404 TMSB4X 105862 1033 chrX 13106038 13107648 13106481 Y TLR7,TLR8,TMSB4X NA FAM9C IMR90 Hi-C 24141950 TMSB4X 112812 1034 chrX 13491158 13492712 13491820 N NA NA NA NA NA NA TCEANC 178595 1035 chrX 139013662 139017125 139014895 N NA NA MIR505,ATP11C MCF7 ChIA-PET 22265404 RBMX 3050723 1036 chrX 148280321 148281761 148280893 N NA NA AFF2 IMR90 Hi-C 24141950 IDS 305123 1037 chrX 148958487 148959696 148959148 N NA NA NSMCE2 MCF7 ChIA-PET 19890323 HSFX2 102761 1038 chrX 1701151 1702936 1702129 N NA P2RY8,ASMT NA NA NA NA ASMT 11412 1039 chrX 18692830 18694419 18693403 Y PHKA2,CDKL5 NA NA NA NA NA CDKL5 249105 1040 chrX 19212240 19214272 19213103 N NA NA NA NA NA NA PDHA1 147739 1041 chrX 24259965 24261895 24261179 N NA NA ZFX,EIF2S3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFX 92203 1042 chrX 3770224 3803170 3799457 N NA LOC389906 NA NA NA NA LOC389906 8289 1043 chrX 3808649 3841522 3837886,3815583 N,N NA;NA LOC389906 NA NA NA NA LOC389906 46714 1044 chrX 39713584 39716106 39714615 Y BCOR NA BCOR IMR90 Hi-C 24141950 BCOR 320476 1045 chrX 39870965 39874566 39872435,39874065 N,Y NA;NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 162016 1046 chrX 40429126 40430980 40430221 N NA ATP6AP2 ATP6AP2 IMR90 Hi-C 24141950 ATP6AP2 9236 1047 chrX 45617608 45618452 45618337 N NA NA MIR222,MIR221 IMR90 Hi-C 24141950 ZNF673 688172 1048 chrX 4627115 4630322 4628903 Y NA NA NA NA NA NA LOC389906 865180 1049 chrX 48534131 48536512 48534901 N NA WAS,SUV39H1 NA NA NA NA WAS 5674 1050 chrX 48595326 48596778 48595869 N NA SUV39H1 SUV39H1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUV39H1 40195 1051 chrX 52004463 52005667 52005012 Y NA NA NA NA NA NA MAGED1 458308 1052 chrX 53740379 53744169 53741854 Y KDM5C,SMC1A,HUWE1,PHF8 HUWE1 HUWE1 MCF7 ChIA-PET 22265404 HUWE1 26706 1053 chrX 54664601 54667361 54665932 Y NA NA ITIH6,MAGED2 MCF7 ChIA-PET 22265404 GNL3L 107957 1054 chrX 64069906 64072227 64070679 Y MTMR8 NA NA NA NA NA FAM123B 644282 1055 chrX 64815959 64816507 64816263 Y NA NA MSN IMR90 Hi-C 24141950 LAS1L 61273 1056 chrX 78177884 78180947 78179128 N NA P2RY10 NA NA NA NA P2RY10 19882 1057 chrY 10018726 10022384 10019741,10021874 N,N NA;NA NA NA NA NA NA CD99 7459498 1058 chrY 10023767 10024756 10024244 N NA NA NA NA NA NA CD99 7464539 1059 chrY 10032953 10034268 10033485 N NA NA NA NA NA NA CD99 7473725 1060 chrY 10037647 10038107 10037796 N NA NA NA NA NA NA CD99 7478419 1061 chrY 1651151 1652968 1652129 N NA P2RY8,ASMT NA NA NA NA ASMT 11380 1062 chrY 2389084 2390876 2389714 N NA DHRSX NA NA NA NA DHRSX 20069 1063 chrY 918808 922119 919757 N NA NA NA NA NA NA IL3RA 483390