Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 100064031 100066961 100065866 N NA PALMD NA NA NA NA PALMD 44470 2 chr1 100790060 100792672 100791266 N NA CDC14A CDC14A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC14A 25351 3 chr1 101249760 101254291 101252058 N NA NA CDC14A,LOC100128787,VCAM1,EXTL2 IMR90 Hi-C 24141950 EXTL2 106127 4 chr1 103119304 103127307 103126331 Y NA NA NA NA NA NA RNPC3 941271 5 chr1 108853142 108916652 108916292,108854012 N,N NA;NA NA SLC25A24 MCF7 ChIA-PET 22265404 SLC25A24 110168 6 chr1 109073417 109077411 109076434 N NA FAM102B FAM102B K562,MCF7 ChIA-PET 22265404 FAM102B 25560 7 chr1 109621741 109624004 109622525 N NA WDR47,TAF13,TMEM167B WDR47,SCARNA2 K562 ChIA-PET 22265404 TAF13 3117 8 chr1 110331155 110339191 110336336,110331970 N,N NA;NA NA CSF1,AHCYL1,FAM40A,GSTM4,EPS8L3,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CSF1 114042 9 chr1 110360043 110368536 110361169,110365010,110366611 Y,Y,Y NA;GNAI3,AMPD2,CSF1;GSTM2,CSF1 NA CSF1,AHCYL1 IMR90 Hi-C 24141950 CSF1 84697 10 chr1 110394013 110396951 110395172 N NA NA AHCYL1,CSF1 IMR90 Hi-C 24141950 CSF1 56282 11 chr1 110405494 110408008 110406973 Y GNAI3,CSF1 CSF1 CSF1,GSTM2,GSTM4,GNAI3,AHCYL1 IMR90 Hi-C 24141950 CSF1 45225 12 chr1 110520891 110523712 110522401 N NA AHCYL1 AHCYL1,GSTM3,EPS8L3,CSF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AHCYL1 3675 13 chr1 112860096 112863375 112862062 N NA NA NA NA NA NA ST7L 298665 14 chr1 112932875 112934714 112933538 N NA NA CTTNBP2NL,WNT2B,MIR4256,ST7L,CAPZA1,RHOC,MOV10,PPM1J IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ST7L 227326 15 chr1 113360555 113375037 113364476,113361892 N,N NA;NA NA RHOC,PPM1J,FAM19A3,SLC16A1,LRIG2 IMR90 Hi-C 24141950 PPM1J 102605 16 chr1 113402700 113404828 113403917 N NA NA FAM19A3,PPM1J,RHOC,AKR7A2P1,SLC16A1 IMR90 Hi-C 24141950 SLC16A1 94147 17 chr1 113419803 113422943 113421078 N NA NA FAM19A3,PPM1J,RHOC,AKR7A2P1,SLC16A1,MOV10,LRIG2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC16A1 76032 18 chr1 113424211 113426922 113425971 N NA NA FAM19A3,PPM1J,AKR7A2P1,SLC16A1,LRIG2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC16A1 72053 19 chr1 113759717 113761878 113760837 N NA NA MAGI3 IMR90 Hi-C 24141950 LRIG2 143886 20 chr1 116709602 116711604 116710727 N NA NA ATP1A1,SLC22A15,CD58,IGSF3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ATP1A1 204191 21 chr1 116820218 116822775 116821030 N NA NA NA NA NA NA ATP1A1 93020 22 chr1 117364122 117371423 117369100 N NA NA PTGFRN K562 ChIA-PET 22265404 PTGFRN 81266 23 chr1 118196590 118204428 118198424,118202639 N,N NA;NA FAM46C FAM46C,GDAP2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM46C 47986 24 chr1 118207753 118210692 118208665 Y MAN1A2 NA FAM46C,GDAP2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM46C 59149 25 chr1 11940184 11944155 11943170,11941418 Y,N NPPB,MFN2;NA KIAA2013 CLCN6,NPPB,MTHFR,NPPA,MFN2,PLOD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KIAA2013 42330 26 chr1 120400861 120403635 120402066 N NA NA HMGCS2,REG4,ADAM30,NOTCH2,NBPF7 IMR90 Hi-C 24141950 PHGDH 146442 27 chr1 121483975 121485563 121484651 N NA NA NA NA NA NA PHGDH 1229556 28 chr1 142616439 142640019 142618790,142639045,142633593,142621990 N,N,N,N NA;NA;NA;NA NA NA NA NA NA SRGAP2P2 1275729 29 chr1 142780992 142823422 142782359,142789433,142784843,142793915,142798050,142804161,142821209 N,N,N,N,N,N,N NA;NA;NA;NA;NA;NA;NA NA NA NA NA NA SRGAP2P2 1092326 30 chr1 142827283 142839411 142829409,142835144 N,N NA;NA NA NA NA NA NA SRGAP2P2 1076337 31 chr1 142851685 142856170 142853760 N NA NA NA NA NA NA SRGAP2P2 1059578 32 chr1 142862550 142864480 142863454 N NA NA NA NA NA NA SRGAP2P2 1051268 33 chr1 142884678 142885373 142885070 N NA NA NA NA NA NA SRGAP2P2 1030375 34 chr1 142887000 142888384 142887590 N NA NA NA NA NA NA SRGAP2P2 1027364 35 chr1 142890327 142891584 142890968 N NA NA NA NA NA NA SRGAP2P2 1024164 36 chr1 143162727 143176291 143163438,143175138 N,N NA;NA NA NA NA NA NA SRGAP2P2 739457 37 chr1 143179796 143183115 143181296 N NA NA NA NA NA NA SRGAP2P2 732633 38 chr1 143189310 143193881 143190715 N NA NA NA NA NA NA SRGAP2P2 721867 39 chr1 143198550 143207394 143199769,143202458 N,N NA;NA NA NA NA NA NA SRGAP2P2 708354 40 chr1 143278658 143282053 143280473 N NA NA NA NA NA NA SRGAP2P2 633695 41 chr1 143388321 143390593 143388602 N NA NA NA NA NA NA SRGAP2P2 525155 42 chr1 143406728 143448869 143406952,143446605,143421695 N,N,N NA;NA;NA NA NA NA NA NA SRGAP2P2 466879 43 chr1 143450967 143454751 143453294 N NA NA NA NA NA NA SRGAP2P2 460997 44 chr1 144531395 144535541 144533888 Y PDE4DIP NA PDE4DIP,SEC22B,NOTCH2NL,HIST2H2AB,HIST2H2AC,HIST2H2BE,LOC728875 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC653513 144484 45 chr1 145057638 145061612 145058941 N NA PDE4DIP,SEC22B NOTCH2NL,PDE4DIP,SEC22B,LOC653513,NBPF9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PDE4DIP 17646 46 chr1 145139078 145140173 145139382 N NA SEC22B NA NA NA NA SEC22B 42671 47 chr1 145394409 145398026 145397986,145395645 N,N NA;NA HFE2,TXNIP PDE4DIP,SEC22B,HFE2,GNRHR2,LIX1L,RBM8A,PIAS3,POLR3C,NUDT17,ANKRD35,TXNIP,ANKRD34A,POLR3GL,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HFE2 15165 48 chr1 146214732 146215461 146215114 N NA NA NA NA NA NA GPR89A 387629 49 chr1 146369181 146370524 146370164 N NA NA NA NA NA NA PRKAB2 273605 50 chr1 14649277 14661810 14661027 N NA NA KAZN IMR90 Hi-C 24141950 KAZN 263403 51 chr1 146544024 146545175 146544754 N NA NA PRKAB2 IMR90 Hi-C 24141950 PRKAB2 98954 52 chr1 146554819 146558471 146556433 N NA NA CHD1L,LOC728989,PRKAB2,FMO5 K562,MCF7 ChIA-PET 22265404 PRKAB2 85658 53 chr1 14747805 14749842 14748836 N NA NA KAZN IMR90 Hi-C 24141950 KAZN 175371 54 chr1 14760048 14765530 14762250,14763651 N,N NA;NA NA KAZN IMR90 Hi-C 24141950 KAZN 159683 55 chr1 147734324 147737379 147735634 N NA NA NA NA NA NA CHD1L 1020033 56 chr1 147750500 147753019 147752143 N NA NA NA NA NA NA CHD1L 1036209 57 chr1 147805338 147809449 147807020 Y NA NA NA NA NA NA CHD1L 1091047 58 chr1 148240561 148242670 148241270 N NA NA NA NA NA NA CHD1L 1526270 59 chr1 148251612 148253122 148252315 N NA NA NA NA NA NA HIST2H2BF 1530806 60 chr1 149193132 149194865 149194390 N NA NA NA NA NA NA HIST2H2BF 589063 61 chr1 149214020 149217634 149215126 N NA NA NA NA NA NA HIST2H2BF 566294 62 chr1 149222399 149223868 149222558 N NA NA NBPF10,SEC22B,NBPF15 MCF7 ChIA-PET 22265404 HIST2H2BF 560060 63 chr1 149225088 149226494 149225919 N NA NA SEC22B MCF7 ChIA-PET 22265404 HIST2H2BF 557434 64 chr1 151444461 151447109 151445845 Y C1orf56,RIIAD1,OAZ3 POGZ RIIAD1,LOC100132111,TUFT1,CGN,SNX27,POGZ,PI4KB,PSMB4,CELF3,OAZ3,TDRKH,MRPL9,RORC,C2CD4D IMR90,MCF7,HELA,H1ESC,K562 Hi-C,ChIA-PET,5C 24141950,22265404,22955621 POGZ 12520 65 chr1 151917141 151919696 151918376 Y NA THEM4 S100A10,CELF3,THEM4,RORC,S100A11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THEM4 34780 66 chr1 152016223 152021800 152020783 N NA S100A11 S100A11 IMR90 Hi-C 24141950 S100A11 6712 67 chr1 154283878 154287855 154285262 N NA HAX1,AQP10,ATP8B2 TPM3,MIR190B,C1orf43,C1orf189,UBAP2L,HAX1,AQP10,ATP8B2,IL6R,CHRNB2,UBE2Q1 IMR90 Hi-C 24141950 AQP10 5737 68 chr1 154357046 154360690 154358703 N NA NA IL6R,ATP8B2,UBE2Q1 IMR90 Hi-C 24141950 ATP8B2 56770 69 chr1 157123190 157126559 157125468 N NA ETV3 ETV3,ETV3L K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ETV3 14807 70 chr1 157229883 157257783 157243434,157249758,157249210,157244824,157253800 Y,N,N,Y,N NA;NA;NA;NA;NA NA NA NA NA NA ETV3 121500 71 chr1 157335245 157340403 157337078 N NA NA FCRL5,FCRL4 IMR90 Hi-C 24141950 ETV3 226862 72 chr1 157372394 157374769 157373543 N NA NA NA NA NA NA ETV3 264011 73 chr1 158115035 158117463 158116237 N NA NA NA NA NA NA SPTA1 539043 74 chr1 158787818 158790808 158789524 Y PYHIN1,IFI16,MNDA NA NA NA NA NA SPTA1 131312 75 chr1 15922517 15934019 15930146 N NA DDI2 DNAJC16,AGMAT,DDI2,PLEKHM2,SLC25A34,TMEM82,FBLIM1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDI2 9934 76 chr1 160694981 160697072 160696111 Y CD48,FCER1G,CD244,SLAMF7 NA CD48,SLAMF7 IMR90 Hi-C 24141950 CD84 145675 77 chr1 161358274 161392847 161359903,161369363,161392044,161383206 Y,Y,N,N HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A;NA;NA;NA NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 74108 78 chr1 161396405 161410704 161397861,161410444 N,N NA;NA NA APOA2,TOMM40L,NDUFS2,DUSP12 IMR90 Hi-C 24141950 FCGR2A 64501 79 chr1 161428254 161429991 161429091 N NA FCGR2A NDUFS2,DUSP12 IMR90 Hi-C 24141950 FCGR2A 45214 80 chr1 161456281 161463997 161457493 N NA FCGR2A,HSPA6 DUSP12,FCRLB,FCGR2A,FCRLA IMR90 Hi-C 24141950 FCGR2A 11208 81 chr1 161535214 161536625 161536114 N NA HSPA6,FCGR3A,HSPA7 DUSP12 IMR90 Hi-C 24141950 FCGR3A 14801 82 chr1 16485483 16496245 16489082,16494224 Y,N NA;NA ARHGEF19 CLCNKA,C1orf64,HSPB7,FAM131C,CLCNKB,EPHA2,ARHGEF19,RSG1,SPATA21,C1orf144,SPEN,ZBTB17,FBXO42 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARHGEF19 42859 83 chr1 16497184 16502304 16499094 N NA ARHGEF19 CLCNKA,HSPB7,C1orf64,CLCNKB,FAM131C,EPHA2,ARHGEF19,FBXO42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGEF19 36800 84 chr1 165565871 165569773 165567558 N NA MGST3 RXRG,LOC400794,UCK2,LOC440700,ALDH9A1,MGST3 IMR90 Hi-C 24141950 MGST3 30337 85 chr1 166434462 166461478 166459256 N NA NA NA NA NA NA POGK 347246 86 chr1 166668185 166669627 166668203 N NA NA CD247 IMR90 Hi-C 24141950 POGK 139097 87 chr1 166671755 166676377 166674870,166673088 N,N NA;NA NA CD247 IMR90 Hi-C 24141950 POGK 132347 88 chr1 167532864 167588758 167586596,167545105,167566774,167574159,167562263,167533270 Y,N,N,N,N,N POU2F1,POU2F1,CD247,RCSD1;NA;NA;NA;NA;NA CREG1,RCSD1 CREG1,GPA33,RCSD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CREG1 9808 89 chr1 16822324 16834118 16825771 Y NA CROCCP3 SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 CROCCP3 3128 90 chr1 16839353 16840541 16839523 N NA CROCCP3 NECAP2,SPATA21,CROCCP3,NBPF1,CROCC,CROCCP2,MST1P2,MIR3675,ESPNP,ARHGEF19,C1orf144,FBXO42 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCCP3 20157 91 chr1 171336688 171343284 171342668 N NA NA NA NA NA NA PRRC2C 111382 92 chr1 171722276 171724069 171723049 N NA VAMP4,METTL13 METTL13,MYOC,VAMP4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 VAMP4 10897 93 chr1 171729902 171732827 171731501 N NA VAMP4,METTL13 METTL13,DNM3,VAMP4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 METTL13 17934 94 chr1 17195311 17196875 17196505 N NA NA CROCC,NBPF1 IMR90 Hi-C 24141950 CROCC 51570 95 chr1 17219006 17224221 17222377 N NA CROCC CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CROCC 24224 96 chr1 17229238 17233268 17231515,17232181 Y,N PADI4,PADI2;NA CROCC CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCC 15177 97 chr1 17238038 17243865 17240504 Y NA CROCC CROCC K562 ChIA-PET 22265404 CROCC 4580 98 chr1 172795350 172796415 172795377 N NA NA CENPL,DARS2,TNFSF4,LOC100506023,TNFSF18 IMR90 Hi-C 24141950 C1orf9 293090 99 chr1 172874360 172877497 172876680 N NA NA TNFSF4,LOC100506023,TNFSF18,SNORD47,SNORD81,GAS5,SNORD75,ZBTB37,SNORD80,SNORD76,SNORD44,LOC100506046,SNORD77,SNORD79,SNORD78,DARS2 IMR90 Hi-C 24141950 C1orf9 372100 100 chr1 172900173 172904294 172903259 Y TNFSF18,TNFSF4 NA TNFSF4,LOC100506023,TNFSF18,DARS2,CENPL,ZBTB37,GAS5 IMR90 Hi-C 24141950 C1orf9 397913 101 chr1 173988461 173993216 173991583,173992910 N,N NA;NA RC3H1 ZBTB37,RC3H1,GAS5 IMR90 Hi-C 24141950 RC3H1 26251 102 chr1 176209583 176216242 176210521 N NA RFWD2 TNR,RFWD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RFWD2 33213 103 chr1 180489538 180491585 180491235 N NA ACBD6 XPR1,MR1,KIAA1614,STX6,ACBD6 IMR90 Hi-C 24141950 ACBD6 17516 104 chr1 180530956 180533366 180532583 N NA NA XPR1 IMR90 Hi-C 24141950 ACBD6 58934 105 chr1 180539374 180542862 180541628 N NA NA XPR1,ACBD6 IMR90 Hi-C 24141950 XPR1 58284 106 chr1 180552480 180557010 180554889,180556027 N,N NA;NA XPR1 XPR1,ACBD6 IMR90 Hi-C 24141950 XPR1 44136 107 chr1 180578434 180581935 180579822 N NA XPR1 ACBD6,XPR1,KIAA1614 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 XPR1 19211 108 chr1 181097020 181101719 181098613 Y MR1,IER5 IER5 STX6,ACBD6,MR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 39382 109 chr1 181104402 181105714 181105420 Y STX6,MR1,IER5 IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 46764 110 chr1 181109116 181112601 181111327 N NA NA STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 51478 111 chr1 181120611 181123350 181122229 Y NA NA STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IER5 62973 112 chr1 181874167 181876524 181875745 N NA NA CACNA1E IMR90 Hi-C 24141950 GLUL 484817 113 chr1 181886521 181890648 181888224 N NA NA NA NA NA NA GLUL 470693 114 chr1 182109133 182120708 182118962 Y RNASEL,GLUL,GLUL NA LINC00272,TEDDM1,GLUL IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GLUL 240633 115 chr1 182257139 182272358 182261761,182269341 N,N NA;NA NA GLUL K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 GLUL 88983 116 chr1 182304872 182310196 182305377,182307385,182309990 N,N,N NA;NA;NA NA GLUL,CACNA1E MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 GLUL 51145 117 chr1 183573096 183574786 183573555 Y NCF2,NCF2,ARPC5 ARPC5 SMG7,SHCBP1L,NMNAT2,DKFZP564C196,NCF2,RGL1 IMR90 Hi-C 24141950 ARPC5 30199 118 chr1 18748136 18750613 18749153 N NA NA IGSF21 IMR90 Hi-C 24141950 ALDH4A1 478680 119 chr1 18755458 18757525 18756843 N NA NA IGSF21 IMR90 Hi-C 24141950 ALDH4A1 471768 120 chr1 187980783 187983442 187982460 N NA NA NA NA NA NA C1orf27 1635893 121 chr1 189118183 189128074 189119010 N NA NA NA NA NA NA C1orf27 2773293 122 chr1 19128653 19136157 19134081 N NA NA PAX7 IMR90 Hi-C 24141950 ALDH4A1 93136 123 chr1 191791516 191793400 191792694 N NA NA NA NA NA NA RGS2 984769 124 chr1 191857364 191860145 191858453 N NA NA NA NA NA NA RGS2 918024 125 chr1 192092106 192094764 192093003 N NA NA NA NA NA NA RGS2 683405 126 chr1 194313157 194328726 194327207 N NA NA NA NA NA NA CDC73 1222069 127 chr1 194625529 194628299 194626997 N NA NA NA NA NA NA CDC73 1534441 128 chr1 194804850 194827675 194825901 N NA NA NA NA NA NA CDC73 1713762 129 chr1 195732143 195733590 195732785 N NA NA NA NA NA NA CFH 887418 130 chr1 195813253 195837157 195836190 N NA NA NA NA NA NA CFH 783851 131 chr1 195866988 195869626 195868191 N NA NA NA NA NA NA CFH 751382 132 chr1 197951399 197966265 197964570 N NA NA ATP6V1G3,PTPRC IMR90 Hi-C 24141950 NEK7 159843 133 chr1 198562096 198567609 198565422 N NA PTPRC NA NA NA NA PTPRC 40528 134 chr1 198600949 198605132 198602867,198602753 N,N NA;NA PTPRC PTPRC IMR90 Hi-C 24141950 PTPRC 3005 135 chr1 201519743 201527168 201521084,201524175 Y,Y NA;LMOD1 CSRP1 NAV1,RPS10P7,IPO9,SHISA4,LMOD1,CSRP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CSRP1 43356 136 chr1 201531107 201557580 201532230,201536291,201536407,201540405,201547499,201551422 N,N,N,Y,N,N NA;NA;NA;NA;NA;NA NA NAV1,RPS10P7,IPO9,CSRP1,TIMM17A,RNPEP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CSRP1 54720 137 chr1 202030881 202035062 202032387,202033924 N,N NA;NA NA RNPEP,NAV1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ELF3 51191 138 chr1 20203712 20206296 20204885 Y OTUD3 OTUD3 NA NA NA NA OTUD3 2592 139 chr1 202043785 202047943 202045380 Y PPP1R12B,ELF3 NA NA NA NA NA ELF3 64095 140 chr1 202073815 202081373 202075088 Y PPP1R12B,ELF3,LGR6 ARL8A,PTPN7 RNPEP,LGR6,NAV1,ELF3,ARL8A,GPR37L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARL8A 32498 141 chr1 20334573 20335869 20335476 N NA NA PLA2G2C,UBXN10,VWA5B1 IMR90 Hi-C 24141950 OTUD3 125685 142 chr1 204462146 204464864 204463604 N NA MDM4 PIK3C2B,PPP1R15B,LOC127841 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MDM4 20643 143 chr1 204475061 204476967 204475995 N NA MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 8540 144 chr1 204658475 204663516 204662271,204660824 N,N NA;NA NA LRRN2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MDM4 172968 145 chr1 204673369 204684710 204675210,204680360,204684102 N,N,Y NA;NA;NA NA MDM4,LRRN2,NFASC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MDM4 187862 146 chr1 207377953 207379535 207378551 N NA NA NA NA NA NA CD55 115282 147 chr1 207394655 207396134 207395553 N NA NA NA NA NA NA CD55 98683 148 chr1 207413377 207415856 207414764 N NA NA CD55 MCF7 ChIA-PET 22265404 CD55 78961 149 chr1 207416779 207419167 207417975 N NA NA CR2,CR1,PFKFB2 IMR90 Hi-C 24141950 CD55 75650 150 chr1 207482223 207491907 207483312,207490691 N,N NA;NA CD55 PFKFB2,CD55,C4BPB,C4BPA,YOD1,CR2,CR1 IMR90 Hi-C 24141950 CD55 2910 151 chr1 208135130 208140185 208137018 Y NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC148696 143406 152 chr1 211394637 211396618 211395424 N NA RCOR3 HHAT IMR90 Hi-C 24141950 RCOR3 36090 153 chr1 211418606 211422494 211421578 N NA RCOR3 RCOR3,HHAT K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RCOR3 10214 154 chr1 211686805 211690323 211688937 N NA NA NEK2,RCOR3,TRAF5,LINC00467,RD3,SLC30A1,INTS7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC30A1 61776 155 chr1 211720830 211723212 211722190 N NA SLC30A1 NEK2,TRAF5 IMR90 Hi-C 24141950 SLC30A1 28887 156 chr1 211802934 211805367 211803960 N NA NEK2 LINC00467,TRAF5,SLC30A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NEK2 43605 157 chr1 212323675 212383302 212326446,212340720,212356795,212371337 N,N,N,N NA;NA;NA;NA NA TMEM206,DTL,PPP2R5A,NENF,INTS7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2R5A 75577 158 chr1 212386306 212412990 212408155,212411652 N,N NA;NA PPP2R5A DTL,TMEM206,PPP2R5A IMR90 Hi-C 24141950 PPP2R5A 45889 159 chr1 212414323 212417246 212415744 N NA PPP2R5A PPP2R5A,DTL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2R5A 41633 160 chr1 212427778 212430032 212428347 N NA PPP2R5A DTL,PPP2R5A IMR90 Hi-C 24141950 PPP2R5A 28847 161 chr1 212651609 212654199 212652819 N NA NENF NSL1,ATF3,FAM71A,BATF3,FLVCR1,VASH2,ANGEL2,NENF,TATDN3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NENF 45380 162 chr1 212660626 212663647 212662082 Y ATF3,ATF3,ATF3 NA ATF3,FAM71A,ANGEL2,NSL1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NENF 54397 163 chr1 212704746 212708873 212705952 Y ATF3,ATF3,ATF3 ATF3 ATF3,FAM71A,NSL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ATF3 29803 164 chr1 212727517 212735198 212731981 Y NA ATF3 ATF3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATF3 3478 165 chr1 213217545 213220805 213219113 N NA ANGEL2,RPS6KC1 RPS6KC1,ANGEL2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RPS6KC1 3783 166 chr1 2143643 2155393 2144173 N NA C1orf86,SKI SKI,MORN1,C1orf86 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 C1orf86 4471 167 chr1 214996426 215015865 214997294 N NA NA KCNK2,KCTD3 IMR90 Hi-C 24141950 CENPF 219894 168 chr1 21717646 21721373 21719246 N NA ECE1,NBPF3 ECE1,NBPF3,RAP1GAP,USP48,ALPL IMR90 Hi-C 24141950 NBPF3 45248 169 chr1 21723163 21726472 21724142 Y NA NBPF3 ECE1,NBPF3,RAP1GAP,ALPL,USP48 IMR90 Hi-C 24141950 NBPF3 40149 170 chr1 220472810 220477205 220473945 N NA RAB3GAP2 RAB3GAP2,MARC2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAB3GAP2 26967 171 chr1 221139421 221141402 221140364 N NA NA DUSP10 IMR90 Hi-C 24141950 HLX 86678 172 chr1 22116204 22121736 22118108 N NA USP48 USP48,HSPG2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 USP48 6516 173 chr1 221207546 221210292 221209407 Y HLX NA NA NA NA NA HLX 154803 174 chr1 222222337 222225496 222224465 N NA NA DUSP10 IMR90 Hi-C 24141950 DUSP10 306821 175 chr1 222637959 222640227 222638893 Y NA NA DUSP10,MIA3,AIDA,BROX IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TAF1A 123048 176 chr1 224118841 224120388 224119867 N NA NA NA NA NA NA TP53BP2 85167 177 chr1 224179092 224186225 224180425 Y NA NA NA NA NA NA FBXO28 115566 178 chr1 224200055 224212426 224202255 N NA NA NA NA NA NA FBXO28 89365 179 chr1 224266423 224269306 224268002 N NA FBXO28 TP53BP2,CNIH4,NVL IMR90 Hi-C 24141950 FBXO28 32485 180 chr1 224689946 224693245 224691306 Y NA NA WDR26,CNIH3 IMR90 Hi-C 24141950 WDR26 67945 181 chr1 22490986 22499104 22491633 N NA NA CDC42,WNT4,ZBTB40,C1QA,C1QC,EPHA8,C1QB,EPHB2 IMR90 Hi-C 24141950 CDC42 111866 182 chr1 225630928 225633740 225632758 N NA LBR TMEM63A,LBR,ENAH,SRP9,EPHX1,PYCR2,LEFTY2,C1orf55 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LBR 14371 183 chr1 22606763 22613022 22612143 Y WNT4 NA C1QC,C1QB,EPHA8,C1QA,CDC42,WNT4,ZBTB40 IMR90 Hi-C 24141950 ZBTB40 165322 184 chr1 226137812 226139597 226138912 N NA PYCR2,C1orf55 EPHX1 IMR90 Hi-C 24141950 PYCR2 25847 185 chr1 226295865 226300608 226298388 N NA H3F3A ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 45457 186 chr1 227543354 227546851 227545197 N NA CDC42BPA CDC42BPA,ADCK3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC42BPA 37528 187 chr1 227556665 227557505 227557110 N NA NA CDC42BPA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC42BPA 50839 188 chr1 227582481 227586005 227584500 N NA NA CDC42BPA IMR90 Hi-C 24141950 CDC42BPA 76655 189 chr1 227615651 227619331 227617352 N NA NA CDC42BPA,PSEN2,C1orf95,ITPKB,ADCK3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC42BPA 109825 190 chr1 229047 230158 229717 N NA NA NA NA NA NA LOC100288069 483910 191 chr1 229484356 229486435 229485663 N NA C1orf96 RHOU,C1orf96 IMR90 Hi-C 24141950 C1orf96 5668 192 chr1 231180409 231183207 231181957 N NA FAM89A FAM89A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM89A 4414 193 chr1 231184057 231187024 231185279 N NA FAM89A FAM89A,CAPN9,TTC13 IMR90 Hi-C 24141950 FAM89A 8062 194 chr1 231199542 231203297 231201682 N NA FAM89A TTC13,CAPN9,ARV1,FAM89A,TRIM67,COG2,LOC149373,GNPAT,C1orf131 IMR90 Hi-C 24141950 FAM89A 23547 195 chr1 231294746 231296648 231295790 N NA NA NA NA NA NA GNPAT 80271 196 chr1 233678535 233680927 233679495 N NA NA KCNK1,SLC35F3 IMR90 Hi-C 24141950 KCNK1 68823 197 chr1 234158 236342 235838 N NA NA NA NA NA NA LOC100288069 477726 198 chr1 234633564 234635953 234635051 N NA TARBP1,LOC100506795 LOC100506810,RBM34,IRF2BP2,LINC00184,LOC100506795 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TARBP1 18715 199 chr1 234678215 234687000 234681763,234680291 N,Y NA;NA LOC100506795 LOC100506795,IRF2BP2 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 LOC100506795 10690 200 chr1 234805397 234813606 234812121 Y NA LOC100506810 IRF2BP2,LOC100506810,LOC100506795,LINC00184 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 46183 201 chr1 234834829 234837470 234836064 N NA LOC100506810 IRF2BP2,LINC00184,LOC100506810 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 22319 202 chr1 234904700 234909625 234907989 N NA LOC100506810 LOC100506810,IRF2BP2,LOC100506795,LINC00184,TOMM20,RBM34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 44911 203 chr1 234975503 235005132 235003144,234978482,234987494 N,N,Y NA;NA;IRF2BP2 NA IRF2BP2,LINC00184,LOC100506810,TARBP1,TOMM20,RBM34 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 115714 204 chr1 235009132 235014450 235011410,235013680 Y,N NA;NA NA IRF2BP2,LOC100506810,LINC00184,TARBP1,TOMM20,RBM34,LOC100506795 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 149343 205 chr1 235088608 235100278 235091103,235098824,235093264 Y,N,N IRF2BP2,ARID4B,ARID4B;NA;NA NA IRF2BP2,LOC100506810,TARBP1,LINC00184,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 191978 206 chr1 235108004 235118283 235109341,235111794,235116751,235114659 Y,N,N,Y NA;NA;NA;IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 173973 207 chr1 235146580 235149280 235147848 N NA NA LINC00184,TARBP1,LOC100506795,IRF2BP2,LOC100506810 IMR90 Hi-C 24141950 TOMM20 142976 208 chr1 235184877 235188310 235186836 Y ARID4B NA LOC100506795,LOC100506810,LINC00184,IRF2BP2 IMR90 Hi-C 24141950 TOMM20 103946 209 chr1 235245766 235247773 235246949 N NA TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 44483 210 chr1 23584870 23587049 23586100 N NA NA KDM1A,HTR1D,LUZP1,ASAP3,TCEA3,LOC729059,HNRNPR,MDS2 IMR90 Hi-C 24141950 HNRNPR 83804 211 chr1 236449906 236454097 236451582 N NA ERO1LB ERO1LB,GPR137B,EDARADD MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ERO1LB 4567 212 chr1 236512717 236518499 236513819,236516655 N,N NA;NA EDARADD NA NA NA NA EDARADD 39181 213 chr1 23889505 23896734 23894743 N NA E2F2,ID3 E2F2,ID3,MDS2 IMR90 Hi-C 24141950 ID3 3220 214 chr1 23902897 23904504 23904036 Y ID3 E2F2,ID3 E2F2 IMR90 Hi-C 24141950 ID3 16612 215 chr1 242106975 242109188 242108381 N NA NA EXO1 IMR90 Hi-C 24141950 EXO1 95482 216 chr1 244013545 244015778 244014089 N NA NA LOC339529 IMR90 Hi-C 24141950 ZNF238 198783 217 chr1 244456512 244490835 244462948,244478246,244466595,244486634,244488437 Y,N,Y,Y,N AKT3,AKT3,ADSS;NA;NA;AKT3,AKT3,ADSS;NA C1orf100 SDCCAG8,AKT3,LOC339529,ADSS,C1orf100,C1orf101 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C1orf100 25102 218 chr1 244509202 244510581 244509955 N NA C1orf100 C1orf100,ADSS,AKT3 IMR90 Hi-C 24141950 C1orf100 5356 219 chr1 245056652 245063131 245057310 Y NA HNRNPU-AS1,HNRNPU EFCAB2,HNRNPU,C1orf101,COX20,SMYD3,HNRNPU-AS1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HNRNPU 28825 220 chr1 245081375 245083454 245082121 N NA EFCAB2 SMYD3,EFCAB2,C1orf101,HNRNPU,PPPDE1,COX20 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 49830 221 chr1 246861677 246864229 246862601 Y SCCPDH SCCPDH NA NA NA NA SCCPDH 23149 222 chr1 247523851 247533026 247524942 N NA ZNF496 ZNF496,AHCTF1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF496 28806 223 chr1 247633406 247637792 247634764 N NA NA NA NA NA NA ZNF496 138361 224 chr1 249181716 249186391 249183843 N NA ZNF672,ZNF692,PGBD2 PGBD2 K562,MCF7 ChIA-PET 22265404 PGBD2 14051 225 chr1 25022999 25024841 25024052 N NA CLIC4 NA NA NA NA CLIC4 46919 226 chr1 25030850 25034760 25031976 N NA CLIC4 SRRM1,CLIC4,RUNX3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLIC4 37000 227 chr1 25050339 25054704 25051416 N NA CLIC4 RUNX3,CLIC4,SRRM1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CLIC4 17056 228 chr1 25061070 25063085 25062058 N NA CLIC4 CLIC4,SRRM1 IMR90 Hi-C 24141950 CLIC4 8675 229 chr1 25405571 25408211 25407284 N NA NA RUNX3,FUCA1,CNR2,SYF2 IMR90 Hi-C 24141950 SYF2 150802 230 chr1 25416887 25418453 25417774 N NA NA RUNX3,SRRM1,IL22RA1 IMR90 Hi-C 24141950 SYF2 140560 231 chr1 25592495 25596071 25594386 N NA SYF2,C1orf63,RHD NA NA NA NA RHD 2910 232 chr1 26258901 26263256 26260180 N NA STMN1 STMN1 K562 ChIA-PET 22265404 STMN1 25908 233 chr1 26404023 26422847 26408493,26420882,26405314 N,N,N NA;NA;NA PDIK1L PAFAH2,EXTL1,ZNF593,CEP85,UBXN11,SLC30A2,TRIM63,PDIK1L,FAM110D,AIM1L,ZNF683,CATSPER4,CNKSR1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PDIK1L 14809 234 chr1 26703496 26706925 26704346 N NA AIM1L ZNF683,HMGN2,TRIM63,PDIK1L,ZNF593,CNKSR1,CATSPER4,CEP85,SH3BGRL3,UBXN11,CD52,AIM1L,DHDDS,LIN28A,EXTL1,FAM110D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AIM1L 22875 235 chr1 26945013 26950531 26947814 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 71991 236 chr1 26961325 26965302 26963221 N NA NA ARID1A,ZDHHC18,RPS6KA1,PIGV,SFN IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARID1A 57220 237 chr1 27352796 27355878 27353701 Y TMEM222,MAP3K6,TRNP1 TRNP1 FAM46B,C1orf172,SLC9A1,WDTC1,WASF2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TRNP1 32601 238 chr1 27399613 27401771 27400870 Y ARID1A NA NA NA NA NA TRNP1 79418 239 chr1 27492309 27493497 27492973 N NA SLC9A1 NA NA NA NA SLC9A1 10858 240 chr1 27518387 27520280 27519406 Y NA SLC9A1,WDTC1 WDTC1,SLC9A1,C1orf172 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC9A1 36936 241 chr1 27820959 27828426 27826778 N NA WASF2 WASF2,SYTL1,GPR3,AHDC1,FGR K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WASF2 4281 242 chr1 28438505 28440615 28439421 Y FGR,FGR,FGR,STX12,C1orf38,XKR8,SESN2,PTAFR,PTAFR,MED18,DNAJC8,EYA3 EYA3 PTAFR,EYA3,ATPIF1,DNAJC8,LOC653566 IMR90 Hi-C 24141950 EYA3 23357 243 chr1 30601194 30603059 30602026 N NA NA PTPRU,MECR IMR90 Hi-C 24141950 LOC100129196 588560 244 chr1 31237268 31241211 31238983 Y LAPTM5 LOC100129196,MATN1,LAPTM5 MATN1,LOC100129196,LAPTM5,SDC3,PUM1,SNORD103A IMR90 Hi-C 24141950 LAPTM5 6585 245 chr1 31248819 31253582 31252065 N NA LAPTM5 LAPTM5,MECR,MATN1,LOC100129196,SNORD103A,SNORD103B,PUM1,SDC3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LAPTM5 18136 246 chr1 31255040 31258446 31256000 N NA LAPTM5 LAPTM5,MECR,MATN1,LOC100129196,SNORD103A,SNORD103B,PUM1,SDC3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LAPTM5 24357 247 chr1 31281302 31283542 31282814 N NA NA SNORD103A,PUM1,SDC3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LAPTM5 50619 248 chr1 31295846 31298479 31297209 N NA NA LOC100129196,MATN1,SDC3,PUM1 IMR90 Hi-C 24141950 LAPTM5 65163 249 chr1 31544327 31546697 31545346 N NA PUM1 PUM1 K562,MCF7 ChIA-PET 22265404 PUM1 5763 250 chr1 31572916 31575039 31573811 N NA PUM1 PUM1,NKAIN1 IMR90 Hi-C 24141950 PUM1 34352 251 chr1 31935842 31946407 31945013 N NA NA PEF1,NKAIN1,LOC149086,SERINC2,FABP3,SNRNP40,ZCCHC17,LOC284551,TINAGL1,SPOCD1,HCRTR1 IMR90 Hi-C 24141950 PEF1 164431 252 chr1 31954733 31957208 31956467 Y PEF1 NA SERINC2,SNRNP40,HCRTR1,NKAIN1,FABP3,LOC149086,LOC284551,TINAGL1 IMR90 Hi-C 24141950 PEF1 153630 253 chr1 32291474 32293773 32292902 N NA NA SPOCD1,PTP4A2,KHDRBS1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTP4A2 110215 254 chr1 32408279 32423134 32410093,32420469 N,Y NA;TMEM234,PEF1,PTP4A2,PTP4A2 PTP4A2 KHDRBS1,SPOCD1,PTP4A2,TINAGL1,COL16A1,PEF1,BAI2,TMEM39B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTP4A2 4291 255 chr1 33440360 33447944 33446948 Y RNF19B RNF19B RNF19B,AK2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19B 10074 256 chr1 36252774 36256838 36254068 N NA CLSPN,EIF2C4 CLSPN,TFAP2E,C1orf216,EIF2C1,EIF2C3,EIF2C4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EIF2C4 16990 257 chr1 37866434 37890301 37889579 N NA ZC3H12A GRIK3 IMR90 Hi-C 24141950 ZC3H12A 49818 258 chr1 38730891 38732119 38731436 N NA NA NA NA NA NA UTP11L 252507 259 chr1 38756775 38759228 38757854 N NA NA NA NA NA NA UTP11L 278391 260 chr1 38773444 38775604 38774689 N NA NA NA NA NA NA UTP11L 295060 261 chr1 38778183 38780059 38779485 N NA NA NA NA NA NA UTP11L 299799 262 chr1 38987893 38990923 38989473 N NA NA NA NA NA NA RRAGC 334417 263 chr1 39236508 39244346 39244008 N NA NA NA NA NA NA RRAGC 80994 264 chr1 40175884 40178527 40177242 N NA PPIE NT5C1A,PPIE,PABPC4,MACF1,PPIEL,HEYL,HPCAL4,BMP8B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPIE 25990 265 chr1 40263954 40274384 40264995 Y NA NA HEYL,PPIE,BMP8B,MFSD2A,MACF1,NT5C1A,TRIT1,MYCL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PPIE 59437 266 chr1 4036372 4088788 4037385 N NA NA AJAP1 IMR90 Hi-C 24141950 LOC100133612 219404 267 chr1 41332405 41335926 41334179 N NA CITED4 CITED4,CTPS,KCNQ4 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 CITED4 4387 268 chr1 41340688 41344989 41341989 N NA CITED4 CTPS,KCNQ4,CITED4,NFYC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CITED4 12670 269 chr1 41404336 41409565 41405428 N NA CTPS CITED4,KCNQ4,RIMS3,CTPS,NFYC,LOC100507178,SLFNL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTPS 35442 270 chr1 41825017 41833371 41826417 N NA NA NA NA NA NA SCMH1 117202 271 chr1 42499388 42503224 42501706 N NA NA HIVEP3,CCDC30 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXJ3 298324 272 chr1 43585412 43593217 43586163 N NA EBNA1BP2 ERMAP,FAM183A,EBNA1BP2 IMR90 Hi-C 24141950 EBNA1BP2 45024 273 chr1 43988015 43989737 43989014 Y PTPRF NA PTPRF IMR90 Hi-C 24141950 KDM4A 126060 274 chr1 45727116 45733481 45732187 N NA LOC400752 ZSWIM5,UROD,HECTD3,BTBD19,PLK3,TCTEX1D4 IMR90 Hi-C 24141950 LOC400752 36101 275 chr1 46613281 46615669 46614206 N NA PIK3R3 PIK3R3,TSPAN1,MAST2,POMGNT1,LURAP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIK3R3 14573 276 chr1 46623180 46625087 46624382 N NA PIK3R3 PIK3R3,MAST2,POMGNT1,LURAP1,TSPAN1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIK3R3 24472 277 chr1 46954428 46966305 46955433 N NA DMBX1 FAAH,DMBX1,MKNK1,KNCN,LOC100507423,LOC729041 IMR90 Hi-C 24141950 DMBX1 6363 278 chr1 50797228 50799471 50799137 N NA NA AGBL4 IMR90 Hi-C 24141950 FAF1 626465 279 chr1 53168401 53170382 53168907 Y NA SELRC1,ZYG11B SELRC1,CPT2 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SELRC1 4363 280 chr1 53647772 53650322 53649092 N NA CPT2,C1orf123 SCP2,SLC1A7,C1orf123,ZCCHC11,ZYG11A,ECHDC2,PODN,CPT2,ZYG11B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CPT2 11779 281 chr1 540494 541122 540895 N NA NA NA NA NA NA LOC100288069 172946 282 chr1 54876075 54879735 54877568 N NA SSBP3 TCEANC2,SSBP3,CYB5RL,MRPL37 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SSBP3 3983 283 chr1 54929028 54932318 54929824 Y NA NA TMEM59,TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SSBP3 56936 284 chr1 54952704 54957019 54954640 N NA NA TCEANC2,SSBP3,TMEM59,MRPL37,CYB5RL,CDCP2,C1orf177,YIPF1,DIO1,HSPB11,HEATR8-TTC4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP3 80612 285 chr1 54964537 54965844 54965416 Y NA NA TCEANC2,SSBP3,MRPL37,CYB5RL,CDCP2,YIPF1,TMEM59,HSPB11,HEATR8-TTC4,ACOT11,FAM151A IMR90 Hi-C 24141950 SSBP3 92445 286 chr1 54978705 54981449 54980002 N NA NA TCEANC2,SSBP3,CDCP2,YIPF1,CYB5RL,MRPL37,TMEM59,HEATR8-TTC4,ACOT11,FAM151A,DIO1,HSPB11,LDLRAD1,PARS2,TTC22 IMR90 Hi-C 24141950 SSBP3 106613 287 chr1 55938804 55945418 55940041 N NA NA PRKAA2,PPAP2B IMR90 Hi-C 24141950 LOC100507634 257723 288 chr1 56795610 56799366 56798033 Y NA NA PPAP2B IMR90 Hi-C 24141950 LOC100507634 1114529 289 chr1 568803 570182 569888 N NA NA NA NA NA NA LOC100288069 143886 290 chr1 59485328 59487239 59486035 N NA NA FGGY,LOC100131060,JUN,HSD52,MIR4711 IMR90 Hi-C 24141950 JUN 235543 291 chr1 61089387 61106171 61105902 N NA NA NA NA NA NA NFIA 436775 292 chr1 61476461 61480185 61478616 N NA NA NFIA IMR90 Hi-C 24141950 NFIA 62761 293 chr1 61513542 61525035 61517612,61523155 N,N NA;NA NFIA INADL,NFIA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFIA 17911 294 chr1 68004472 68006103 68005190 N NA NA GNG12,LOC100289178,GADD45A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERBP1 108349 295 chr1 70016283 70043781 70017461,70019196 Y,N NA;NA NA NA NA NA NA LRRC40 627580 296 chr1 71140310 71142765 71141286 N NA NA NA NA NA NA CTH 263409 297 chr1 719041 728545 721149,725223 N,N NA;NA LOC100288069,LOC643837 NA NA NA NA LOC100288069 4973 298 chr1 76099523 76143976 76143600,76138417 N,N NA;NA ACADM MSH4,RABGGTB K562 ChIA-PET 22265404 ACADM 46067 299 chr1 8179705 8184463 8182689 N NA NA ERRFI1,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 93312 300 chr1 8253978 8259611 8257983,8254724 Y,Y NA;NA NA ERRFI1,PARK7,RERE,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 167585 301 chr1 8261149 8262000 8261394 N NA NA ERRFI1,RERE,PARK7,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 174756 302 chr1 8270139 8274282 8272186 Y NA NA ERRFI1,PARK7,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 183746 303 chr1 85684787 85686955 85686046 N NA SYDE2,C1orf52 WDR63,MIR4423,SYDE2,MCOLN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SYDE2 18059 304 chr1 85689920 85692293 85691608 N NA SYDE2,C1orf52,LOC646626 SYDE2,WDR63 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SYDE2 23192 305 chr1 87238518 87242392 87240836 N NA NA HS2ST1,SEP15,SH3GLB1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SH3GLB1 68265 306 chr1 87257519 87260283 87258567 N NA NA SEP15 IMR90 Hi-C 24141950 SH3GLB1 87266 307 chr1 88041421 88045353 88042330 N NA NA NA NA NA NA LMO4 247270 308 chr1 88288574 88292759 88292126 N NA NA LMO4 IMR90 Hi-C 24141950 LMO4 494423 309 chr1 90224708 90233032 90228891 N NA NA LRRC8C,FLJ27354,LRRC8D,ZNF326 IMR90 Hi-C 24141950 LRRC8D 53541 310 chr1 91245545 91317265 91316793 N NA NA BARHL2 IMR90 Hi-C 24141950 ZNF644 170547 311 chr1 92056581 92073325 92057709,92062182 N,N NA;NA NA TGFBR3,HSP90B3P,CDC7,RPAP2,GLMN IMR90 Hi-C 24141950 CDC7 90177 312 chr1 9222606 9224694 9223586 N NA NA SLC2A7,SLC25A33,MIR34A,GPR157 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 H6PD 70169 313 chr1 93438029 93439552 93438683 N NA NA FAM69A,RPL5 IMR90 Hi-C 24141950 MTF2 105240 314 chr1 93454696 93458021 93456141 N NA NA EVI5,FAM69A,RPL5 IMR90 Hi-C 24141950 MTF2 86771 315 chr1 93497957 93500171 93499242 N NA MTF2 MTF2,CCDC18,TMED5,FAM69A,RPL5 IMR90 Hi-C 24141950 MTF2 44621 316 chr1 9488256 9491225 9489065 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 108303 317 chr1 95200200 95201877 95200979 N NA NA F3,ABCD3,SLC44A3 IMR90 Hi-C 24141950 ABCD3 316267 318 chr1 95549412 95554211 95551194 Y NA TMEM56-RWDD3 ALG14,TMEM56-RWDD3,SLC44A3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM56-RWDD3 29268 319 chr1 99868496 99872797 99870905 N NA NA NA NA NA NA PALMD 238634 320 chr10 100120304 100122772 100120990 Y PYROXD2,LOXL4 NA PYROXD2,C10orf28,LOXL4,HPS1 IMR90 Hi-C 24141950 PYROXD2 52206 321 chr10 104955806 104959264 104957127 Y C10orf32,NT5C2 NT5C2 NA NA NA NA NT5C2 2743 322 chr10 112195511 112202815 112201704 N NA NA DUSP5 IMR90 Hi-C 24141950 DUSP5 54810 323 chr10 112205212 112208059 112207201 Y NA DUSP5 DUSP5 IMR90 Hi-C 24141950 DUSP5 49566 324 chr10 11725943 11728629 11727489 N NA NA USP6NL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECHDC3 55727 325 chr10 119166777 119172545 119168467,119171717 N,N NA;NA PDZD8 PDZD8 K562 ChIA-PET 22265404 PDZD8 31840 326 chr10 119520852 119545826 119522397,119521196 N,N NA;NA NA CASC2 IMR90 Hi-C 24141950 RAB11FIP2 260288 327 chr10 120241075 120244101 120242491 N NA NA NA NA NA NA FAM204A 139236 328 chr10 120527948 120530541 120528985 N NA C10orf46 C10orf46 IMR90 Hi-C 24141950 C10orf46 13190 329 chr10 12095549 12096989 12096050 N NA UPF2,DHTKD1 UPF2,DHTKD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 UPF2 10380 330 chr10 12104267 12106426 12105610 N NA UPF2,DHTKD1 NA NA NA NA DHTKD1 4508 331 chr10 121306779 121308844 121307375 N NA RGS10,TIAL1 RGS10,TIAL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RGS10 4557 332 chr10 130396704 130399917 130397919 N NA NA NA NA NA NA MKI67 472236 333 chr10 130426313 130429553 130427996 N NA NA NA NA NA NA MKI67 501845 334 chr10 133727844 133732705 133728854,133732460 N,N NA;NA PPP2R2D NA NA NA NA PPP2R2D 15255 335 chr10 133814182 133821772 133815002 N NA BNIP3 BNIP3 IMR90 Hi-C 24141950 BNIP3 18747 336 chr10 133875943 133879118 133878618 N NA NA BNIP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BNIP3 80508 337 chr10 13424480 13427311 13425247 N NA SEPHS1 BEND7 IMR90 Hi-C 24141950 SEPHS1 34182 338 chr10 13431923 13441730 13433233 N NA SEPHS1 BEND7,SEPHS1,PRPF18 IMR90 Hi-C 24141950 SEPHS1 41625 339 chr10 13444519 13450349 13446397 N NA NA BEND7,PRPF18 IMR90 Hi-C 24141950 SEPHS1 54221 340 chr10 13568308 13572747 13571091 N NA BEND7 BEND7,PRPF18 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BEND7 23332 341 chr10 15076832 15078402 15077608 N NA NA OLAH IMR90 Hi-C 24141950 RPP38 60780 342 chr10 15222097 15228275 15225308 N NA NMT2 NA NA NA NA NMT2 11402 343 chr10 15463542 15485251 15483246 N NA NA ITGA8,FAM188A IMR90 Hi-C 24141950 NMT2 252847 344 chr10 17501497 17503702 17502564 N NA ST8SIA6 NA NA NA NA ST8SIA6 5243 345 chr10 17519704 17529755 17528078 N NA ST8SIA6 RSU1,CUBN,ST8SIA6,PTPLA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ST8SIA6 23450 346 chr10 17536809 17556550 17548546 Y ST8SIA6 ST8SIA6 CUBN,ST8SIA6,PTPLA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ST8SIA6 40555 347 chr10 21497346 21499013 21497882 N NA NEBL NA NA NA NA NEBL 34230 348 chr10 22310882 22312802 22311618 N NA DNAJC1 ARMC3,COMMD3-BMI1,LOC100499489,NEBL,PIP4K2A IMR90 Hi-C 24141950 DNAJC1 18232 349 chr10 22516923 22521029 22518397 N NA NA COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 COMMD3-BMI1 84283 350 chr10 23103878 23108250 23106105 N NA NA COMMD3-BMI1,PIP4K2A IMR90 Hi-C 24141950 PIP4K2A 100375 351 chr10 23113591 23115692 23114896 N NA NA PIP4K2A,COMMD3-BMI1,ARMC3 IMR90 Hi-C 24141950 PIP4K2A 110088 352 chr10 23800647 23802803 23801998 N NA NA NA NA NA NA OTUD1 72449 353 chr10 29093179 29119920 29099580,29096411,29112265,29115386 N,N,N,N NA;NA;NA;NA NA BAMBI,LYZL1,LOC100507605 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BAMBI 126755 354 chr10 29127527 29130294 29128710 N NA NA BAMBI,LYZL1,LOC100507605,LOC387647 IMR90 Hi-C 24141950 BAMBI 161103 355 chr10 29226588 29230676 29228923 Y NA NA BAMBI,LOC100507605,LYZL1 IMR90 Hi-C 24141950 BAMBI 260164 356 chr10 29272073 29276451 29274436 N NA NA LYZL1,BAMBI,LOC100507605 IMR90 Hi-C 24141950 BAMBI 305649 357 chr10 29420661 29422588 29421508 N NA NA BAMBI,LYZL1,LOC100507605,WAC IMR90 Hi-C 24141950 LOC387647 275913 358 chr10 30703898 30709011 30707751 N NA MAP3K8 MAP3K8,LYZL2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 13939 359 chr10 30782143 30784273 30783073 Y MAP3K8 NA MAP3K8 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 59193 360 chr10 30840006 30844366 30842268 Y NA NA MAP3K8,LOC729668,KIAA1462,MTPAP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 117056 361 chr10 30872043 30873755 30872972 Y MAP3K8,ZNF438,ZNF438 NA LOC729668 IMR90 Hi-C 24141950 MAP3K8 149093 362 chr10 3087592 3089263 3088223 Y NA PFKP PFKP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFKP 20449 363 chr10 31421329 31424376 31422759 Y ZNF438,ZNF438 NA ARHGAP12,ZEB1,ZNF438,ZEB1-AS1 IMR90 Hi-C 24141950 ZEB1-AS1 183648 364 chr10 31890771 31893626 31892590 Y NA NA ZEB1,ARHGAP12,KIF5B IMR90 Hi-C 24141950 ZEB1-AS1 282747 365 chr10 32048368 32051048 32049161 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166722 366 chr10 32223067 32242730 32236488,32240972 N,N NA;NA ARHGAP12 ARHGAP12,KIF5B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 5297 367 chr10 32260789 32267723 32261705,32266509 N,N NA;NA ARHGAP12 KIF5B,ARHGAP12 IMR90 Hi-C 24141950 ARHGAP12 43019 368 chr10 32427651 32429570 32428564 N NA NA KIF5B,ARHGAP12,EPC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIF5B 82280 369 chr10 32702699 32704509 32704024 N NA NA NA NA NA NA EPC1 66586 370 chr10 32730634 32737936 32735476 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 94521 371 chr10 33259246 33262465 33261275 N NA ITGB1 ITGB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 11953 372 chr10 33268303 33271290 33269695 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 21010 373 chr10 33293670 33296008 33294529 N NA ITGB1 ITGB1,C10orf68,PARD3 IMR90 Hi-C 24141950 ITGB1 46377 374 chr10 33338514 33348808 33339318 N NA NA NRP1,C10orf68 IMR90 Hi-C 24141950 ITGB1 91221 375 chr10 3355033 3357865 3356376 N NA NA LOC338588,LOC100216001 IMR90 Hi-C 24141950 PITRM1 140000 376 chr10 3358819 3386128 3360471 N NA NA LOC338588,LOC100216001,KLF6 IMR90 Hi-C 24141950 PITRM1 143786 377 chr10 3593405 3602838 3598750 N NA NA KLF6 IMR90 Hi-C 24141950 KLF6 224635 378 chr10 3709452 3713921 3710588 N NA NA KLF6 K562 ChIA-PET 22265404 KLF6 113552 379 chr10 38159894 38169728 38161010 N NA ZNF248 ZNF248 MCF7 ChIA-PET 22265404 ZNF248 13408 380 chr10 3844383 3854963 3846989,3852034,3853861 Y,N,Y KLF6;NA;KLF6 KLF6 LOC100216001,LOC338588,KLF6,AKR1E2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 16910 381 chr10 3870077 3872281 3871018 Y KLF6 KLF6 LOC338588,LOC100216001,KLF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 42604 382 chr10 3891541 3896476 3894143 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 64068 383 chr10 3931807 3938867 3933374,3937017 N,N NA;NA NA LOC100216001,LOC338588,KLF6 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 104334 384 chr10 3968015 3970730 3969094 N NA NA KLF6,LOC100216001,LOC338588 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 140542 385 chr10 3983786 3989061 3985049 Y KLF6 NA KLF6,LOC100216001,LOC338588 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 156313 386 chr10 43139604 43143601 43141722 N NA ZNF33B ZNF33B MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF33B 5612 387 chr10 43148070 43151081 43150082 N NA ZNF33B NA NA NA NA ZNF33B 14078 388 chr10 43909707 43918080 43913086,43916316 N,N NA;NA HNRNPF,ZNF487P ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 5011 389 chr10 44728705 44730198 44729218 N NA NA LOC283033,TMEM72-AS1,ZNF32-AS3 IMR90 Hi-C 24141950 ZNF32 584379 390 chr10 44744537 44745951 44745072 N NA NA NA NA NA NA ZNF32 600211 391 chr10 44972553 44975510 44973815 N NA NA TMEM72-AS1,ZNF32-AS3 IMR90 Hi-C 24141950 C10orf10 498820 392 chr10 45283431 45285364 45284512 N NA NA NA NA NA NA C10orf10 188966 393 chr10 45774118 45775421 45774608 N NA NA NA NA NA NA ALOX5 94203 394 chr10 47587362 47590403 47588784 N NA NA LOC643650,SYT15,PPYR1 IMR90 Hi-C 24141950 MARCH8 1497008 395 chr10 48482999 48485934 48484117 Y NA NA GDF10,GDF2 IMR90 Hi-C 24141950 MAPK8 1123753 396 chr10 49511438 49528186 49514648 N NA NA FRMPD2,ARHGAP22 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAPK8 81501 397 chr10 4977950 4981942 4979145 N NA AKR1C1 tAKR,AKR1C2,AKR1C3,UCN3,NET1,TUBAL3 IMR90 Hi-C 24141950 AKR1C1 23512 398 chr10 50432526 50434666 50433626 N NA C10orf128 WDFY4,VSTM4,LOC100506733,FAM170B,C10orf71,DRGX IMR90 Hi-C 24141950 C10orf128 36119 399 chr10 52415320 52421313 52419553 N NA SGMS1 SGMS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SGMS1 31583 400 chr10 5323521 5335142 5326681,5333951 N,Y NA;NA NA tAKR,AKR1E2,AKR1C2,AKR1C3,AKR1C4,AKR1CL1 IMR90 Hi-C 24141950 TUBAL3 111651 401 chr10 5357650 5360854 5359975 Y GDI2 NA NA NA NA NA TUBAL3 85939 402 chr10 5588659 5591826 5590935 N NA NA NA NA NA NA ASB13 116732 403 chr10 62587226 62588854 62588031 N NA CDK1 RHOBTB1,ARID5B IMR90 Hi-C 24141950 CDK1 49014 404 chr10 64861277 64868493 64866212,64862490 N,N NA;NA NRBF2 ZNF365,ADO,NRBF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NRBF2 24514 405 chr10 64874494 64877261 64875697 Y NA NRBF2 ZNF365,ADO,NRBF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NRBF2 15746 406 chr10 65423797 65427384 65424630 N NA NA JMJD1C IMR90 Hi-C 24141950 REEP3 142674 407 chr10 66265646 66269293 66267458 N NA NA NA NA NA NA REEP3 984523 408 chr10 69458888 69460303 69459557 N NA NA NA NA NA NA DNAJC12 137634 409 chr10 69522520 69525418 69524182 Y NA NA NA NA NA NA DNAJC12 72519 410 chr10 6958831 6964186 6962909 N NA NA SFMBT2,LOC100507127 IMR90 Hi-C 24141950 LOC439949 336444 411 chr10 69608008 69613021 69609281 Y NA DNAJC12,SIRT1 SIRT1,HERC4,MYPN K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 DNAJC12 10071 412 chr10 70312704 70317056 70314949 N NA SLC25A16,TET1 SLC25A16,CCAR1,DNA2,TET1,STOX1,DDX50,DDX21 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TET1 3061 413 chr10 7069131 7072087 7070554 N NA NA PRKCQ,SFMBT2 IMR90 Hi-C 24141950 SFMBT2 381361 414 chr10 72378271 72379303 72379179 N NA PRF1 KIAA1274,C10orf27,ADAMTS14 IMR90 Hi-C 24141950 PRF1 15740 415 chr10 72411662 72414464 72413234 Y ADAMTS14 PRF1,ADAMTS14 ADAMTS14,PRF1,KIAA1274,SGPL1,PCBD1,C10orf27 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ADAMTS14 18095 416 chr10 72417960 72426795 72421535,72424608 N,Y NA;ADAMTS14 ADAMTS14 ADAMTS14,PRF1,KIAA1274 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ADAMTS14 5764 417 chr10 72557095 72561343 72557793 N NA SGPL1 KIAA1274,PCBD1,SGPL1 IMR90 Hi-C 24141950 SGPL1 14361 418 chr10 73618933 73621495 73620404 Y DNAJB12,DDIT4,C10orf54,PSAP PSAP PSAP,C10orf54,CDH23,CHST3,SPOCK2,DNAJB12,ASCC1,ANAPC16 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PSAP 7851 419 chr10 73636301 73639242 73638532 N NA PSAP PSAP,CHST3,SPOCK2,ASCC1,ANAPC16,CDH23,DNAJB12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 25219 420 chr10 73644915 73654516 73648493,73653859 N,N NA;NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 33833 421 chr10 74060043 74071223 74068452,74061293 Y,N PSAP,DDIT4,DNAJB12;NA DDIT4,DNAJB12 ANAPC16,DDIT4,ASCC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DDIT4 26366 422 chr10 74435049 74437799 74436315 Y CCDC109A,ASCC1,ASCC1 MICU1,MCU MICU1,OIT3,PLA2G12B,MCU IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MCU 14090 423 chr10 75699550 75702022 75700572 N NA PLAU NA NA NA NA PLAU 28688 424 chr10 75715023 75718178 75716498 Y FUT11,NDST2 PLAU,VCL CAMK2G,PLAU,C10orf55,VCL,AP3M1,LOC100507331,KIAA0913,NDST2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 VCL 39694 425 chr10 75725175 75726677 75725794 N NA VCL CAMK2G,AP3M1,VCL,NDST2,C10orf55,PLAU,ADK IMR90 Hi-C 24141950 VCL 31195 426 chr10 80199897 80202802 80201676 N NA NA RPS24,LOC283050,ZMIZ1,LOC100132987 IMR90 Hi-C 24141950 RPS24 406379 427 chr10 81424005 81425464 81425087 N NA NA NA NA NA NA LOC642361 160194 428 chr10 81433129 81435651 81435247 N NA NA NA NA NA NA LOC642361 150007 429 chr10 82528750 82532912 82529727,82531967 N,N NA;NA NA NA NA NA NA TSPAN14 314712 430 chr10 85877864 85879420 85878500 N NA GHITM NA NA NA NA GHITM 19765 431 chr10 88159036 88161225 88160051 Y NA NA WAPAL MCF7 ChIA-PET 22265404 WAPAL 120316 432 chr10 88294224 88298029 88295319 N NA WAPAL WAPAL,OPN4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 WAPAL 12683 433 chr10 90845000 90848374 90846724 N NA NA FAS,LIPA,CH25H IMR90 Hi-C 24141950 PANK1 556955 434 chr10 92862867 92865541 92864526 N NA NUDT9P1 NA NA NA NA NUDT9P1 47296 435 chr10 93431554 93433563 93432199 Y NA NA LOC100188947,HECTD2,TNKS2,RPP30,PPP1R3C IMR90 Hi-C 24141950 TNKS2 124588 436 chr10 94507341 94522357 94516647,94520501,94522122 N,Y,N NA;NA;NA NA EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 57660 437 chr10 94580855 94586291 94582110 N NA EXOC6 EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EXOC6 8179 438 chr10 96939745 96946950 96943585 Y SORBS1,SORBS1 NA SORBS1,C10orf129,PDLIM1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PDLIM1 103831 439 chr10 97883313 97886902 97884844 N NA ZNF518A LOC728558,CCNJ K562 ChIA-PET 22265404 ZNF518A 2570 440 chr10 9855437 9868172 9866980 N NA NA NA NA NA NA USP6NL 1785507 441 chr10 99163449 99170344 99167239 N NA RRP12,PGAM1,EXOSC1,ZDHHC16 EXOSC1,ZDHHC16,PGAM1,RRP12 MCF7,K562 ChIA-PET 22265404 RRP12 2322 442 chr10 9917884 9921209 9920143 N NA NA NA NA NA NA USP6NL 1732470 443 chr10 99599372 99601293 99600132 N NA NA GOLGA7B IMR90 Hi-C 24141950 ZFYVE27 102494 444 chr11 102346870 102348550 102347773 N NA TMEM123 TMEM123,MMP20,BIRC2,BIRC3,MMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM123 23095 445 chr11 105324421 105391123 105386792 N NA NA NA NA NA NA KIAA1826 501831 446 chr11 10736168 10742968 10738564 N NA CTR9 MRVI1,MRVI1-AS1,RNF141,AMPD3,MTRNR2L8,LYVE1 IMR90 Hi-C 24141950 CTR9 29843 447 chr11 10929503 10939297 10930211 N NA ZBED5,LOC729013 EIF4G2,LOC729013,ZBED5,USP47,DKK3,CTR9 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC729013 49739 448 chr11 10951757 10957846 10953040,10955803 N,Y NA;NA NA EIF4G2,MICALCL,LOC729013,ZBED5,CTR9,GALNTL4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC729013 71993 449 chr11 109761178 109764394 109762524 N NA NA NA NA NA NA ZC3H12C 199693 450 chr11 112141049 112195125 112141448,112141434 N,N NA;NA PTS BCO2,PTS,NCAM1,TTC12,C11orf34,LOC100288346 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTS 43961 451 chr11 113505207 113516349 113515825,113505885 N,N NA;NA NA NA NA NA NA ZW10 128136 452 chr11 113533100 113537180 113535771 N NA NA NA NA NA NA ZW10 107305 453 chr11 114210688 114211972 114211342 N NA NA FAM55B IMR90 Hi-C 24141950 C11orf71 59167 454 chr11 11829018 11833582 11832819 N NA USP47 DKK3,CTR9,USP47,EIF4G2,LOC729013,ZBED5,MICAL2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP47 29388 455 chr11 11835640 11837009 11836619 N NA USP47 DKK3,USP47,EIF4G2,MICAL2,GALNTL4,MICALCL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP47 25961 456 chr11 118559942 118561928 118561010 N NA NA BCL9L,DDX6,CXCR5,MIR4492,FOXR1,UPK2,RPS25,TRAPPC4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDB1 82729 457 chr11 118584328 118591869 118586251 N NA NA DDX6,BCL9L,CXCR5,FOXR1,UPK2,TREH,ARCN1,PHLDB1,MIR4492,TRAPPC4,RPL23AP64,CCDC84,RPS25 IMR90 Hi-C 24141950 DDX6 70103 458 chr11 119453556 119463056 119455167,119462681 Y,N NA;NA NA TRIM29,USP2,LOC100499227,PVRL1,GRIK4 IMR90 Hi-C 24141950 USP2 201120 459 chr11 122874208 122874508 122874350 N NA NA C11orf63 IMR90 Hi-C 24141950 HSPA8 58393 460 chr11 123949722 123952183 123950972 N NA VWA5A VWA5A,OR8G1,OR8D2 IMR90 Hi-C 24141950 VWA5A 33928 461 chr11 125401487 125403498 125402816 N NA EI24 EI24 IMR90 Hi-C 24141950 EI24 35800 462 chr11 130391509 130393739 130392305 Y NA NA SNX19,ADAMTS15 IMR90 Hi-C 24141950 ZBTB44 206902 463 chr11 13125130 13135968 13126995 N NA NA RASSF10,LOC100506305,TEAD1 IMR90 Hi-C 24141950 LOC100506305 114035 464 chr11 134628224 134639638 134632467 N NA NA LOC283177 IMR90 Hi-C 24141950 GLB1L2 426456 465 chr11 13893574 13895936 13895142 N NA NA NA NA NA NA FAR1 203368 466 chr11 14430544 14446160 14436575,14444813 N,N NA;NA RRAS2 RRAS2,COPB1,SPON1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RRAS2 44492 467 chr11 16613223 16632792 16627745 N NA NA SOX6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C11orf58 127356 468 chr11 17279623 17281584 17280432 N NA NUCB2 NUCB2 IMR90 Hi-C 24141950 NUCB2 16702 469 chr11 17720106 17721914 17721203 N NA NA SERGEF IMR90 Hi-C 24141950 SERGEF 312723 470 chr11 1793025 1796641 1793947 Y TOLLIP,TNNI2,LSP1,CTSD,MOB2 IFITM10,MOB2 MOB2,IFITM10,MIR4686,TH,IGF2-AS1,INS-IGF2,IGF2,KRTAP5-5,KRTAP5-6,FAM99B,LSP1 IMR90,MCF7,K562,H1ESC,HELA Hi-C,3C,ChIA-PET,5C 24141950,19890323,22265404,22955621 MOB2 7524 471 chr11 18689896 18691695 18690614 N NA SPTY2D1,TMEM86A TSG101 IMR90 Hi-C 24141950 TMEM86A 28656 472 chr11 27197691 27241663 27241075 N NA NA LIN7C,LGR4,BDNF-AS1,CCDC34 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC34 143132 473 chr11 33919816 33923092 33921033 N NA LMO2 NA NA NA NA LMO2 5980 474 chr11 33932650 33935177 33934199 N NA LMO2 LMO2 IMR90 Hi-C 24141950 LMO2 18814 475 chr11 33951592 33967853 33954788,33959088,33963367,33966518 N,Y,N,N NA;NA;NA;NA LMO2 LMO2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LMO2 37756 476 chr11 33973353 33976470 33974605 N NA NA LMO2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LMO2 59517 477 chr11 34065340 34068424 34066643 N NA CAPRIN1 LMO2,CAPRIN1,NAT10,CAT IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CAPRIN1 4806 478 chr11 34391773 34395701 34393268 Y ABTB2 NA ABTB2,ELF5,NAT10,CAT IMR90 Hi-C 24141950 CAT 64771 479 chr11 34606873 34611786 34609541 N NA NA APIP,SLC1A2,PDHX,ELF5,EHF,CD44 IMR90 Hi-C 24141950 CAT 146401 480 chr11 34619590 34627148 34621985,34625347 Y,N ELF5,ELF5,EHF,EHF;NA NA APIP,EHF,CAT,PDHX,SLC1A2,ELF5,CD44 IMR90 Hi-C 24141950 CAT 159118 481 chr11 34630156 34632752 34631603 N NA NA APIP,EHF IMR90 Hi-C 24141950 CAT 169684 482 chr11 34706327 34708060 34707040 Y ABTB2,EHF NA NA NA NA NA PDHX 229617 483 chr11 34826351 34833913 34827780,34831647 N,N NA;NA NA EHF,CAT,APIP IMR90 Hi-C 24141950 PDHX 103764 484 chr11 349261 357933 350552,354967 N,N NA;NA IFITM2,IFITM1,IFITM3,B4GALNT4,PKP3 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 B4GALNT4 11862 485 chr11 35050497 35055025 35052373 Y CD44 NA SLC1A2,CD44,PDHX IMR90 Hi-C 24141950 APIP 112558 486 chr11 35102908 35106763 35104392 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 APIP 164969 487 chr11 3527520 3552247 3529110,3534670 N,N NA;NA NA NA NA NA NA LOC650368 125329 488 chr11 361096 361938 361621 N NA IFITM1,IFITM3,B4GALNT4,PKP3 ANO9,SIGIRR MCF7 ChIA-PET 22265404 B4GALNT4 7857 489 chr11 4181926 4187242 4185727 N NA NA NA NA NA NA RRM1 66002 490 chr11 4207822 4224020 4208630 N NA NA OR52M1 IMR90 Hi-C 24141950 RRM1 91898 491 chr11 43665156 43671865 43665786 N NA HSD17B12 HSD17B12 IMR90 Hi-C 24141950 HSD17B12 30278 492 chr11 44354154 44357382 44355340 N NA NA EXT2,TSPAN18,ALX4 IMR90 Hi-C 24141950 EXT2 237055 493 chr11 44550475 44554152 44552503 N NA NA EXT2,CHST1,ACCS,CD82,TSPAN18,ALX4 IMR90 Hi-C 24141950 EXT2 433376 494 chr11 44557671 44559957 44558908 N NA NA EXT2,CHST1,ACCS,CD82,TSPAN18,ALX4 IMR90 Hi-C 24141950 EXT2 440572 495 chr11 44568896 44572245 44569466 N NA NA EXT2,ACCS,ALX4,CD82,TSPAN18,PRDM11,SYT13,TP53I11 IMR90 Hi-C 24141950 EXT2 451797 496 chr11 45376315 45383314 45377008 N NA NA CHST1,PRDM11,SYT13,EXT2 IMR90 Hi-C 24141950 SLC35C1 442309 497 chr11 45476145 45480168 45478804 N NA NA NA NA NA NA SLC35C1 345455 498 chr11 46237405 46238405 46237938 N NA NA PHF21A,CRY2,CREB3L1,DGKZ IMR90 Hi-C 24141950 CREB3L1 60823 499 chr11 46243599 46245183 46244246 N NA NA PHF21A,DGKZ,CREB3L1 IMR90 Hi-C 24141950 CREB3L1 54045 500 chr11 46257511 46272726 46264935,46259093,46272135,46260828 Y,Y,N,N NA;DGKZ;NA;NA CREB3L1 PHF21A,DGKZ,CREB3L1,MDK IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB3L1 26502 501 chr11 46276438 46279481 46278258 N NA CREB3L1 CREB3L1,PHF21A,DGKZ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB3L1 19747 502 chr11 47413989 47418209 47415782 Y MADD,MADD,MADD,FNBP4,CELF1,CELF1,CELF1,CELF1,SPI1 SPI1,SLC39A13,PSMC3 SPI1,SLC39A13 K562,MCF7 ChIA-PET 22265404 SLC39A13 11837 503 chr11 47937636 47942546 47939642,47938114 Y,N OR4B1,OR4S1,NUP160;NA NA PTPRJ,NUP160 IMR90 Hi-C 24141950 PTPRJ 59564 504 chr11 47964586 47967407 47965708 N NA PTPRJ PTPRJ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTPRJ 34703 505 chr11 57667913 57670782 57668931 N NA NA OR5B21 IMR90 Hi-C 24141950 TMX2-CTNND1 187918 506 chr11 58536620 58570151 58538481,58541592,58544514 N,N,Y NA;NA;MPEG1,OR5B21,LPXN,LPXN NA LPXN,ZFP91-CNTF,GLYATL2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZFP91-CNTF 190033 507 chr11 59303531 59315959 59305195,59313900 N,N NA;NA NA NA NA NA NA OSBP 67658 508 chr11 59316522 59320398 59318062 N NA NA PATL1,OSBP K562 ChIA-PET 22265404 OSBP 63219 509 chr11 59658654 59661427 59659395 N NA TCN1 NA NA NA NA TCN1 24613 510 chr11 59725950 59729218 59728180,59728278 N,N NA;NA NA NA NA NA NA TCN1 91909 511 chr11 59733855 59737795 59735649 Y MRPL16 NA NA NA NA NA TCN1 99814 512 chr11 59887900 59891731 59888735 N NA NA NA NA NA NA TCN1 253859 513 chr11 61777759 61786721 61780233,61784554 N,N NA;NA FTH1 FADS1,BEST1,FTH1,FADS3,FADS2,RAB3IL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FTH1 42627 514 chr11 61791842 61794927 61793181 Y DAGLA,FTH1 NA FADS3,FADS2,FTH1,BEST1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FTH1 56710 515 chr11 61871896 61874538 61872821 Y DAGLA,FTH1 INCENP FEN1,C11orf10,FADS3,BEST1,RAB3IL1,FADS2,C11orf9,DAGLA,DKFZP434K028,FADS1,FTH1,INCENP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 INCENP 16907 516 chr11 64266503 64270743 64268169 N NA NA NRXN2,RASGRP2,PYGM,SLC22A12,SLC22A11 IMR90,HELA,K562 Hi-C,5C 24141950,22955621 RPS6KA4 139878 517 chr11 64917184 64918935 64918313 N NA TM7SF2,ZNHIT2,MRPL49,FAU,SYVN1,SPDYC,CAPN1 SYVN1,CAPN1,SPDYC MCF7,K562 ChIA-PET 22265404 SYVN1 15181 518 chr11 65458717 65461786 65459991 N NA RELA,KAT5,RNASEH2C NA NA NA NA KAT5 17687 519 chr11 66148566 66150589 66149661 N NA BRMS1,B3GNT1,SLC29A2 CD248,SPTBN2,RIN1,BRMS1,CNIH2,B3GNT1,YIF1A,TMEM151A,SLC29A2,NPAS4,MRPL11,PELI3,DPP3,ZDHHC24,ACTN3,RBM4B IMR90 Hi-C 24141950 SLC29A2 9275 520 chr11 66220622 66227597 66226257 N NA MRPL11,PELI3,DPP3 PELI3,DPP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PELI3 6201 521 chr11 66773107 66775558 66774189 N NA PC PC,RHOD,SYT12,KDM2A IMR90 Hi-C 24141950 PC 47260 522 chr11 67895163 67897938 67895956 Y CHKA CHKA CHKA,SUV420H1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHKA 6305 523 chr11 68977084 68979083 68977996,68977947 N,N NA;NA NA ORAOV1,MYEOV,CCND1,FGF19 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYEOV 82539 524 chr11 68993361 69003617 69002465 N NA NA ORAOV1,MYEOV,CCND1,MRGPRF,TPCN2,FGF19 IMR90 Hi-C 24141950 MYEOV 58005 525 chr11 69193752 69218892 69197061,69208896,69210877,69216621 N,N,N,N NA;NA;NA;NA NA MYEOV,TPCN2,CCND1,ORAOV1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYEOV 132130 526 chr11 69234630 69236808 69235475 Y NA NA MYEOV,ORAOV1,CCND1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYEOV 173008 527 chr11 69244135 69269247 69259093,69264053 N,N NA;NA NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MYEOV 182513 528 chr11 69337840 69340587 69339385 Y NA NA MYEOV,CCND1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCND1 115286 529 chr11 69792436 69795385 69794834 N NA NA ANO1,ORAOV1,FGF4,FADD IMR90 Hi-C 24141950 FADD 253884 530 chr11 69816148 69817505 69816585 N NA NA ANO1,ORAOV1,FGF4,FGF19 IMR90 Hi-C 24141950 FADD 231764 531 chr11 71410025 71424956 71414228,71418280,71424226 N,N,N NA;NA;NA NA NA NA NA NA FAM86C1 73601 532 chr11 71448361 71465119 71449496,71455401 N,N NA;NA FAM86C1 NA NA NA NA FAM86C1 33438 533 chr11 73480135 73482410 73481413 N NA RAB6A,MRPL48 RAB6A,MRPL48,CHCHD8,PAAF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB6A 7934 534 chr11 73489043 73492973 73490593 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 5944 535 chr11 74215478 74218694 74216137 N NA KCNE3,LIPT2 LIPT2,PPME1,P4HA3,CHRDL2 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LIPT2 10723 536 chr11 74808644 74829736 74813854 N NA SLCO2B1 SLCO2B1,LOC100507050,XRRA1,OR2AT4,ARRB1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLCO2B1 32296 537 chr11 75244547 75261490 75245671,75248450,75254768 N,Y,N NA;UVRAG;NA GDPD5,SERPINH1 RPS3,GDPD5,KLHL35,SERPINH1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 GDPD5 7948 538 chr11 75263490 75267633 75265705 Y SERPINH1 GDPD5,SERPINH1 RPS3,GDPD5,KLHL35 IMR90 Hi-C 24141950 SERPINH1 5468 539 chr11 75400167 75402288 75401475 N NA NA MAP6,LOC283214,DGAT2 IMR90 Hi-C 24141950 UVRAG 123924 540 chr11 75945240 75947893 75946756 N NA NA C11orf30,MAP6,UVRAG,WNT11,PRKRIR,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 143987 541 chr11 76446184 76450035 76446996 N NA TSKU TSKU,ACER3,B3GNT6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TSKU 44250 542 chr11 76455494 76459164 76456863 N NA TSKU ACER3,TSKU,B3GNT6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TSKU 35121 543 chr11 85818109 85821531 85820480 N NA PICALM PICALM,C11orf73 IMR90 Hi-C 24141950 PICALM 37186 544 chr11 85843868 85864694 85862478,85859527,85846017,85854693,85856940,85847994,85850138 N,Y,Y,N,N,N,Y NA;EED;EED,PICALM,PICALM;NA;NA;NA;PICALM,PICALM NA PICALM,EED,CCDC83,C11orf73 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PICALM 62945 545 chr11 85865994 85897015 85866293,85869567,85887468,85874385,85894609 N,N,N,Y,N NA;NA;NA;PICALM,PICALM;NA NA PICALM,EED,CCDC83,C11orf73,SYTL2 IMR90 Hi-C 24141950 EED 58791 546 chr11 85905594 85910244 85908167 N NA EED PICALM,CCDC83 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EED 45562 547 chr11 85911473 85915082 85913759 Y PICALM,PICALM EED PICALM,CCDC83,EED IMR90 Hi-C 24141950 EED 40724 548 chr11 85928498 85937261 85929693 Y NA EED PICALM,CCDC83,EED,SYTL2 IMR90 Hi-C 24141950 EED 18545 549 chr11 86451911 86455760 86454630,86451964 Y,N NA;NA NA PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FZD4 210680 550 chr11 86494189 86496809 86495625 N NA NA ME3,PRSS23 IMR90 Hi-C 24141950 FZD4 169631 551 chr11 88110777 88127292 88111813 N NA CTSC GRM5 IMR90 Hi-C 24141950 CTSC 39836 552 chr11 89972079 89980172 89973904 N NA CHORDC1 CHORDC1 K562 ChIA-PET 22265404 CHORDC1 15547 553 chr11 91554315 91557385 91556071 N NA NA NA NA NA NA SLC36A4 1373710 554 chr11 91636445 91640429 91638737 N NA NA NA NA NA NA SLC36A4 1290666 555 chr11 91815182 91817607 91816446 N NA NA NA NA NA NA SLC36A4 1113488 556 chr11 93704882 93708329 93707040 N NA NA MRE11A IMR90 Hi-C 24141950 PANX1 153765 557 chr11 93715886 93717671 93716933 N NA NA MRE11A IMR90 Hi-C 24141950 PANX1 144423 558 chr11 9383177 9387357 9384028,9386005 N,Y NA;ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 18812 559 chr11 94463642 94466746 94465468 N NA AMOTL1 PIWIL4,AMOTL1 IMR90 Hi-C 24141950 AMOTL1 34762 560 chr11 95176133 95177984 95176784 N NA NA NA NA NA NA SESN3 211887 561 chr11 95182581 95187718 95184217,95187048 N,N NA;NA NA NA NA NA NA SESN3 218335 562 chr11 95465577 95468793 95467416 N NA NA SESN3 IMR90 Hi-C 24141950 FAM76B 54161 563 chr11 9571040 9576350 9573715,9571482 N,N NA;NA WEE1 ZNF143,SWAP70,LOC283104,LOC440028,WEE1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WEE1 18878 564 chr11 9586204 9589006 9587807 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1 ZNF143,LOC644656 MCF7,K562 ChIA-PET 22265404 WEE1 6222 565 chr11 96227054 96243303 96238205,96240026,96235822 N,N,N NA;NA;NA NA NA NA NA NA JRKL 103896 566 chr11 9633910 9649200 9635256,9643905 N,N NA;NA WEE1 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028,LYVE1,MRVI1,MRVI1-AS1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 38682 567 chr11 97832710 97836880 97834917,97836864 N,Y NA;NA NA NA NA NA NA JRKL 1709552 568 chr11 97843379 97845547 97844344 N NA NA NA NA NA NA JRKL 1720221 569 chr12 102249044 102250433 102249769 N NA GNPTAB,DRAM1 GNPTAB,DRAM1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DRAM1 20672 570 chr12 104564682 104567180 104565850 N NA NFYB,TXNRD1 TXNRD1,HCFC2,ALDH1L2,NFYB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFYB 32642 571 chr12 105351415 105355345 105352154 N NA C12orf45 CHST11,SLC41A2,TXNRD1,C12orf45,ALDH1L2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C12orf45 24753 572 chr12 106348591 106349803 106349190 N NA NA NUAK1 IMR90 Hi-C 24141950 TCP11L2 346778 573 chr12 106681752 106683349 106682665 N NA TCP11L2 CKAP4,NUAK1,TCP11L2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TCP11L2 13232 574 chr12 108509172 108518368 108511456,108511609,108509447,108515086 Y,N,N,N NA;NA;NA;NA WSCD2 WSCD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WSCD2 5143 575 chr12 108870395 108873279 108871620,108872735 N,N NA;NA FICD NA NA NA NA FICD 35772 576 chr12 10891593 10894337 10892429 N NA CSDA CSDA MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CSDA 15640 577 chr12 110516350 110519446 110517627 Y GIT2,RAD9B,C12orf76 C12orf76,IFT81 C12orf76 K562 ChIA-PET 22265404 C12orf76 10850 578 chr12 110690240 110700576 110696186 N NA ATP2A2 ATP2A2,IFT81,ANKRD13A,GIT2,C12orf76,ANAPC7,ARPC3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ATP2A2 18456 579 chr12 112553111 112556100 112554544 Y ALDH2,TRAFD1 NAA25,TRAFD1 TRAFD1,NAA25 MCF7,K562 ChIA-PET 22265404 NAA25 6476 580 chr12 113021623 113022859 113022294 N NA NA NA NA NA NA PTPN11 165087 581 chr12 113853359 113854913 113854227 N NA SDSL SDS IMR90 Hi-C 24141950 SDSL 5303 582 chr12 114019380 114031179 114029379 Y LHX5 NA RBM19 IMR90 Hi-C 24141950 SDSL 159164 583 chr12 114049055 114050648 114050097 N NA NA RBM19 IMR90 Hi-C 24141950 SDSL 188839 584 chr12 114078152 114081128 114079414 N NA NA RBM19 IMR90 Hi-C 24141950 SDSL 217936 585 chr12 114101243 114102704 114102010 Y NA NA NA NA NA NA SDSL 241027 586 chr12 114168516 114213371 114211572 N NA NA RBM19,SDS,SDSL IMR90 Hi-C 24141950 RBM19 190805 587 chr12 116718972 116722004 116720439 N NA MED13L MED13L,MIR4472-2,LINC00173,MAP1LC3B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MED13L 3981 588 chr12 116750502 116753098 116751224 N NA MED13L MED13L,MIR4472-2,LINC00173,C12orf49 IMR90 Hi-C 24141950 MED13L 35511 589 chr12 116773690 116776135 116774555 Y MAP1LC3B2,MED13L NA MED13L IMR90 Hi-C 24141950 MED13L 58699 590 chr12 116783338 116785647 116784240 N NA NA MED13L IMR90 Hi-C 24141950 MED13L 68347 591 chr12 116791727 116803406 116793083,116797934 N,N NA;NA NA MED13L,MIR4472-2,LINC00173,MAP1LC3B2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MED13L 76736 592 chr12 116810171 116812532 116811384 N NA NA MED13L,LINC00173 IMR90 Hi-C 24141950 MED13L 95180 593 chr12 116821947 116830754 116823356 N NA NA MED13L,LINC00173,MIR4472-2,MAP1LC3B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MED13L 106956 594 chr12 116929766 116931278 116930667 N NA LINC00173 MED13L,LINC00173,MAP1LC3B2,MIR4472-2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00173 39962 595 chr12 116945211 116947851 116946595 N NA LINC00173 LINC00173,MED13L,MAP1LC3B2 IMR90 Hi-C 24141950 LINC00173 23389 596 chr12 117035003 117039446 117037124 N NA NA MED13L,MIR4472-2,LINC00173,MAP1LC3B2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LINC00173 63763 597 chr12 120728220 120731686 120729802,120730493 N,N NA;NA PXN,SIRT4 PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SIRT4 8438 598 chr12 121062885 121065239 121063747 N NA POP5 SPPL3 IMR90 Hi-C 24141950 POP5 43684 599 chr12 121565037 121568229 121566917 N NA NA P2RX4,P2RX7 MCF7,K562 ChIA-PET 22265404 P2RX4 79435 600 chr12 122057147 122060158 122058296 N NA KDM2B,ORAI1 NA NA NA NA ORAI1 4297 601 chr12 125116017 125118078 125117249 Y NCOR2 NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 NCOR2 64007 602 chr12 125120108 125121574 125120942 N NA NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 NCOR2 68098 603 chr12 125407220 125410130 125408130 N NA UBC NCOR2,SCARB1,UBC IMR90 Hi-C 24141950 UBC 7633 604 chr12 127377771 127386352 127384799 N NA NA NA NA NA NA AACS 1827846 605 chr12 127390640 127394356 127392687 N NA NA NA NA NA NA AACS 1840715 606 chr12 127398517 127400631 127400013 N NA NA NA NA NA NA AACS 1848592 607 chr12 127494861 127579229 127545130,127569023,127552748 N,N,N NA;NA;NA NA TMEM132C IMR90 Hi-C 24141950 SLC15A4 1729312 608 chr12 127584520 127608608 127596522 N NA NA NA NA NA NA SLC15A4 1699933 609 chr12 127609806 127650532 127640249,127645963,127650438,127647567,127630719,127610370 N,Y,N,N,N,N NA;NA;NA;NA;NA;NA NA NA NA NA NA SLC15A4 1658009 610 chr12 128465568 128469307 128467851 N NA NA NA NA NA NA SLC15A4 839234 611 chr12 131338309 131342632 131340171 N NA STX2,RAN RAN K562 ChIA-PET 22265404 RAN 13985 612 chr12 131719523 131723097 131721459 N NA NA NA NA NA NA GPR133 281071 613 chr12 131730344 131735386 131732565 N NA NA NA NA NA NA GPR133 291892 614 chr12 131833797 131837447 131835819 N NA NA NA NA NA NA SFSWAP 358188 615 chr12 131841462 131843721 131842436 N NA NA NA NA NA NA SFSWAP 351914 616 chr12 131847672 131850366 131848614 N NA NA NA NA NA NA SFSWAP 345269 617 chr12 131918687 131924100 131919293,131923516 N,N NA;NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 271535 618 chr12 131970829 131980097 131978356 N NA NA RIMBP2,GPR133 IMR90 Hi-C 24141950 SFSWAP 215538 619 chr12 132007413 132016395 132014534 Y NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 179240 620 chr12 132071041 132078313 132076995 N NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 117322 621 chr12 132087949 132090870 132089507 N NA NA GPR133 IMR90 Hi-C 24141950 SFSWAP 104765 622 chr12 132111533 132114083 132111883,132113647 N,N NA;NA NA NA NA NA NA SFSWAP 81552 623 chr12 132126060 132129817 132126854 N NA NA NA NA NA NA SFSWAP 65818 624 chr12 132164953 132169131 132166862 N NA SFSWAP SFSWAP IMR90 Hi-C 24141950 SFSWAP 26504 625 chr12 132363515 132365155 132364262 N NA ULK1,PUS1 SFSWAP,ULK1,PUS1,EP400 IMR90 Hi-C 24141950 ULK1 14124 626 chr12 132968983 132971866 132970383 N NA NA GALNT9,LOC100130238,P2RX2,POLE,DDX51,NOC4L,LOC100507055,FBRSL1,EP400NL IMR90 Hi-C 24141950 FBRSL1 95291 627 chr12 132997932 133000905 132999217 N NA NA P2RX2,GALNT9,POLE,LOC100507055,EP400NL,FBRSL1 IMR90 Hi-C 24141950 FBRSL1 66252 628 chr12 133021066 133027305 133022779 Y POLE,DDX51,FBRSL1 FBRSL1 LOC100507055,FBRSL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FBRSL1 39852 629 chr12 14412811 14414494 14413674 Y NA NA ATF7IP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATF7IP 104117 630 chr12 14436403 14438192 14437322 N NA NA NA NA NA NA ATF7IP 80419 631 chr12 16484985 16488673 16485495 N NA MGST1 MGST1 MCF7 ChIA-PET 22265404 MGST1 11403 632 chr12 1710468 1720319 1710910,1714939 N,N NA;NA FBXL14 FBXL14,RAD52,ERC1,WNT5B,WNK1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FBXL14 7137 633 chr12 18188004 18200188 18198944 N NA NA POSTN MCF7 ChIA-PET 19890323 PLEKHA5 1082438 634 chr12 21556675 21573003 21572343,21566805 N,N NA;NA SLCO1A2,PYROXD1 NA NA NA NA SLCO1A2 8304 635 chr12 22093138 22095392 22094423 N NA NA NA NA NA NA CMAS 103767 636 chr12 23571916 23579119 23576722 N NA NA NA NA NA NA ETNK1 793840 637 chr12 24848014 24850312 24849095 N NA NA SOX5 IMR90 Hi-C 24141950 BCAT1 252081 638 chr12 24861212 24863354 24862319 Y BCAT1 NA SOX5 IMR90 Hi-C 24141950 BCAT1 239039 639 chr12 25107620 25110128 25108979 N NA BCAT1 C12orf77,CASC1,BCAT1 IMR90 Hi-C 24141950 BCAT1 5227 640 chr12 25536307 25540422 25539218 Y NA NA BCAT1,CASC1,KRAS,LYRM5,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 132453 641 chr12 25843510 25847893 25844734 N NA NA ITPR2,RASSF8,IFLTD1 IMR90 Hi-C 24141950 KRAS 439656 642 chr12 26425605 26429198 26427826 Y NA NA SSPN,BHLHE41,ITPR2 IMR90 Hi-C 24141950 ASUN 662056 643 chr12 27995820 27998249 27997295 N NA NA PTHLH,KLHDC5,MRPS35 IMR90 Hi-C 24141950 KLHDC5 62633 644 chr12 28021779 28027073 28022656 N NA NA MRPS35,PTHLH IMR90 Hi-C 24141950 KLHDC5 88592 645 chr12 28281605 28285296 28283760 Y PTHLH,PTHLH NA PTHLH IMR90 Hi-C 24141950 CCDC91 124837 646 chr12 28322558 28331807 28328728 N NA NA KLHDC5,MRPS35,PTHLH,MANSC4 IMR90 Hi-C 24141950 CCDC91 78326 647 chr12 28334636 28348785 28343757 N NA NA MRPS35,PTHLH,KLHDC5,CCDC91 IMR90 Hi-C 24141950 CCDC91 61348 648 chr12 28911831 28913820 28913347 N NA NA NA NA NA NA CCDC91 501698 649 chr12 28931639 28934256 28933039 N NA NA NA NA NA NA CCDC91 521506 650 chr12 29297831 29323406 29302204,29317842 N,Y NA;NA NA FAR2 IMR90 Hi-C 24141950 ERGIC2 210737 651 chr12 30683783 30685835 30684886 N NA NA NA NA NA NA IPO8 163094 652 chr12 31900537 31906382 31902266 Y C12orf35,AMN1,H3F3C AMN1 AMN1 K562 ChIA-PET 22265404 AMN1 18429 653 chr12 31985005 31986818 31986095 N NA NA NA NA NA NA AMN1 102897 654 chr12 32172145 32175244 32173753 N NA NA NA NA NA NA C12orf35 59792 655 chr12 32183682 32186264 32184307 N NA NA NA NA NA NA C12orf35 71329 656 chr12 32199793 32203099 32200726 N NA NA AMN1,METTL20,BICD1 IMR90 Hi-C 24141950 BICD1 57086 657 chr12 32551172 32554051 32552599 N NA NA BICD1,FGD4 IMR90 Hi-C 24141950 DNM1L 278086 658 chr12 34273147 34281484 34280234 N NA NA NA NA NA NA ALG10 97931 659 chr12 34479013 34517123 34488995,34486534,34499693,34503784,34509799 N,N,N,N,N NA;NA;NA;NA;NA NA NA NA NA NA ALG10 303797 660 chr12 38492963 38494550 38493481 N NA NA NA NA NA NA KIF21A 1342642 661 chr12 40837267 40842107 40838205,40840348 N,N NA;NA NA NA NA NA NA SLC2A13 337606 662 chr12 4261619 4263877 4262876 Y EFCAB4B,PARP11,C12orf4 NA CCND2 IMR90 Hi-C 24141950 CCND2 119025 663 chr12 46772038 46798169 46777285,46779394,46786547 N,N,N NA;NA;NA SLC38A2 SLC38A1,SLC38A4 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC38A2 5393 664 chr12 46824748 46946281 46867567,46825561,46943720,46918043,46930290,46940907 Y,Y,Y,Y,N,N NA;NA;SLC38A2;NA;NA;NA NA SLC38A2,SLC38A4,SLC38A1,AMIGO2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 58103 665 chr12 46949869 47016636 46951815,46979965 N,N NA;NA NA SLC38A2,SLC38A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 183224 666 chr12 47548657 47555775 47549786,47553889 N,N NA;NA NA NA NA NA NA FAM113B 54277 667 chr12 47657455 47667681 47665949 N NA FAM113B,LOC100233209 FAM113B,AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100233209 47229 668 chr12 47685782 47689024 47687434 N NA NA AMIGO2,FAM113B IMR90 Hi-C 24141950 LOC100233209 75556 669 chr12 47753014 47756877 47755056 N NA NA AMIGO2 IMR90 Hi-C 24141950 LOC100233209 142788 670 chr12 47770417 47779740 47771365,47777560 N,N NA;NA NA AMIGO2,FAM113B IMR90 Hi-C 24141950 LOC100233209 160191 671 chr12 47785860 47821186 47786996 Y NA NA AMIGO2,RPAP3 IMR90 Hi-C 24141950 LOC100233209 175634 672 chr12 48568643 48571914 48570076 N NA ASB8 COL2A1,SENP1,PFKM,ASB8,C12orf68,OR10AD1,TMEM106C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ASB8 17266 673 chr12 48689584 48692395 48690506 N NA NA NA NA NA NA ZNF641 52634 674 chr12 48699758 48703782 48701213 N NA ZNF641 ZNF641,H1FNT IMR90 Hi-C 24141950 ZNF641 41247 675 chr12 48704328 48707543 48705214 N NA ZNF641 H1FNT,ZNF641 IMR90 Hi-C 24141950 ZNF641 37486 676 chr12 48993632 48996044 48994694 N NA NA NA NA NA NA KANSL2 79991 677 chr12 49622861 49630511 49627667,49625845 N,N NA;NA TUBA1A,TUBA1C RHEBL1,DHH,LMBR1L,TUBA1A,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 28354 678 chr12 50338439 50340037 50339509 Y NA NA AQP2,TMBIM6,LOC100286844,NCKAP5L,BCDIN3D,RACGAP1,FMNL3,KCNH3,MCRS1,LOC283332,FAIM2,AQP5,ACCN2,SMARCD1,COX14,CERS5,GPD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RACGAP1 79270 679 chr12 50425077 50428115 50427063 N NA RACGAP1 AQP2,ACCN2,RACGAP1,SMARCD1 IMR90 Hi-C 24141950 RACGAP1 5770 680 chr12 51426223 51428129 51427218 N NA SLC11A2,LETMD1,CSRNP2 SLC11A2 K562 ChIA-PET 22265404 SLC11A2 6024 681 chr12 53266392 53269795 53268143 Y PFDN5 NA KRT18,KRT8,LOC283403,KRT80,EIF4B,LOC283404 MCF7 ChIA-PET 22265404 KRT18 72860 682 chr12 5329580 5345113 5330084 N NA NA ANO2,NTF3 IMR90 Hi-C 24141950 NDUFA9 571316 683 chr12 53386212 53387878 53387058 N NA KRT18,KRT8,EIF4B KRT83,KRT85,KRT84,KRT72,KRT8,KRT18,EIF4B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EIF4B 12184 684 chr12 53633334 53639105 53638284 N NA RARG,MFSD5,ESPL1 RARG,IGFBP6,SOAT2,SPRYD3,ITGB7,MFSD5,ESPL1,C12orf10,AAAS,PFDN5,AMHR2,SP1,ATF7,LOC100652999,LOC283335,TENC1,ZNF740,CSAD,SP7 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MFSD5 6265 685 chr12 53737011 53740361 53738902 N NA PFDN5,C12orf10,AAAS,SP1 ESPL1,PFDN5,C12orf10,AAAS,CSAD,RARG,MFSD5,SP7,SP1,AMHR2,PCBP2,PRR13,ATF7,NPFF,TARBP2,MAP3K12,LOC100652999 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AAAS 21599 686 chr12 53747584 53750795 53749038 N NA AAAS,SP1 PCBP2,SP1,RARG,C12orf10,PFDN5,SP7,AAAS,AMHR2,MAP3K12,PRR13,LOC100652999,ATF7,NPFF,TARBP2,ITGB7 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SP1 23184 687 chr12 53758561 53761645 53759766 N NA AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SP1 12334 688 chr12 53763688 53767459 53765154,53766634 Y,N CSAD,ITGB7,PFDN5,SP1,SP1,PRR13;NA AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 6520 689 chr12 5399682 5431178 5399952 N NA NA ANO2,KCNA6,NTF3 IMR90 Hi-C 24141950 NDUFA9 641418 690 chr12 54590377 54591776 54591483 N NA SMUG1 SMUG1,HOXC4,HOXC9 K562,MCF7 ChIA-PET 22265404 SMUG1 7599 691 chr12 55380838 55385919 55381817 N NA NA NA NA NA NA NCKAP1L 489343 692 chr12 56769051 56772194 56770545 N NA PAN2,IL23A,STAT2 COQ10A,ANKRD52,CS,PAN2,STAT2,APOF,MIP,TIMELESS IMR90 Hi-C 24141950 STAT2 15014 693 chr12 58258636 58260100 58259156 N NA AVIL,CTDSP2 CTDSP2 MCF7 ChIA-PET 22265404 CTDSP2 17889 694 chr12 6269647 6272818 6270403 N NA NA VWF,CD9 IMR90 Hi-C 24141950 TNFRSF1A 178465 695 chr12 6275378 6279184 6277067 Y VAMP1,TNFRSF1A,TAPBPL NA VWF,CD9,PLEKHG6 IMR90 Hi-C 24141950 TNFRSF1A 172099 696 chr12 65552 67471 66984 N NA LOC100288778 NA NA NA NA LOC100288778 20513 697 chr12 65981890 66009777 65997237 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 LEMD3 418539 698 chr12 66035807 66037939 66037820 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 LEMD3 472456 699 chr12 66038461 66042410 66040294 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 LEMD3 475110 700 chr12 66044399 66049115 66047926 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 LLPH 475418 701 chr12 66061265 66066587 66063021 N NA NA RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 LLPH 457946 702 chr12 67276177 67278459 67276661 N NA NA NA NA NA NA CAND1 384602 703 chr12 68757263 68761061 68759048 Y IFNG,RAP1B MDM1 RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MDM1 31102 704 chr12 68763149 68764941 68764084 N NA MDM1 RAP1B,NUP107,LOC100507250 IMR90 Hi-C 24141950 MDM1 36988 705 chr12 69720479 69723560 69721809 N NA LYZ,YEATS4 CPSF6,YEATS4 K562 ChIA-PET 22265404 LYZ 18574 706 chr12 70445580 70448830 70446954 N NA NA PTPRB IMR90 Hi-C 24141950 CNOT2 187944 707 chr12 71629033 71631387 71630332 N NA NA NA NA NA NA THAP2 426290 708 chr12 71694409 71696175 71695141 N NA NA NA NA NA NA THAP2 361502 709 chr12 73125 74201 73685 N NA LOC100288778 NA NA NA NA LOC100288778 13783 710 chr12 73392851 73406388 73398767 N NA NA NA NA NA NA TBC1D15 1159364 711 chr12 73595955 73597442 73597204 N NA NA NA NA NA NA LOC100507377 1088969 712 chr12 73762280 73765086 73763586 N NA NA NA NA NA NA LOC100507377 921325 713 chr12 7445376 7448156 7446377,7446412 N,N NA;NA NA NA NA NA NA PEX5 103617 714 chr12 74902622 74904262 74903088 N NA ATXN7L3B NA NA NA NA ATXN7L3B 27289 715 chr12 76034380 76035715 76035025 N NA NA PHLDA1,BBS10,OSBPL8 IMR90 Hi-C 24141950 KRR1 128962 716 chr12 76093146 76094885 76093728 N NA NA NAP1L1,OSBPL8,PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KRR1 187728 717 chr12 76098457 76101560 76099732 N NA NA PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KRR1 193039 718 chr12 76285859 76288064 76286795 N NA NA PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 137492 719 chr12 76330912 76333326 76331774 N NA NA KRR1 IMR90 Hi-C 24141950 PHLDA1 92230 720 chr12 76346201 76349869 76347883 Y GLIPR1,PHLDA1 NA PHLDA1,KRR1,OSBPL8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 75687 721 chr12 76371062 76373293 76371884 Y NA NA OSBPL8,PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 52263 722 chr12 76485057 76488116 76486384 N NA NAP1L1 NAP1L1,OSBPL8 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 NAP1L1 6319 723 chr12 76610013 76611721 76610860 N NA NA NAP1L1 IMR90 Hi-C 24141950 BBS10 130501 724 chr12 774962 777617 776578 N NA NA NINJ2,CCDC77,B4GALNT3,WNK1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WNK1 84472 725 chr12 7757253 7760688 7758941 Y NA NA NA NA NA NA SLC2A3 328204 726 chr12 80543410 80544706 80543686 N NA NA NA NA NA NA PPP1R12A 214175 727 chr12 8111049 8124344 8111638,8114691,8123427 N,N,Y NA;NA;CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC2A3 22157 728 chr12 8142122 8143183 8142801 N NA FOXJ2 FOXJ2 IMR90 Hi-C 24141950 FOXJ2 42176 729 chr12 8176406 8181051 8179573 N NA FOXJ2,C3AR1 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 4308 730 chr12 83565667 83568812 83567205 N NA NA NA NA NA NA CCDC59 813083 731 chr12 83588855 83592594 83590652 N NA NA NA NA NA NA CCDC59 836271 732 chr12 89617673 89621261 89619313 Y DUSP6,ATP2B1 NA DUSP6,LOC728084,POC1B MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 POC1B 298778 733 chr12 89627541 89630614 89629156 Y DUSP6,ATP2B1 NA POC1B,LOC728084,DUSP6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 POC1B 289425 734 chr12 89765398 89767785 89766833 N NA NA POC1B,LOC728084 IMR90 Hi-C 24141950 POC1B 152254 735 chr12 91852551 92026974 92026358 N NA NA CLLU1,CLLU1OS IMR90 Hi-C 24141950 LOC256021 509473 736 chr12 92072461 92103123 92073963 N NA NA LOC256021 K562 ChIA-PET 22265404 LOC256021 433324 737 chr12 92540354 92545321 92544488,92541614 N,N NA;NA LOC256021 NA NA NA NA LOC256021 3907 738 chr12 92745511 92753195 92751768 N NA NA LOC256021 K562 ChIA-PET 22265404 LOC256021 209064 739 chr12 92756746 92759670 92757833 N NA NA NA NA NA NA LOC256021 220299 740 chr12 94305100 94315879 94306289,94312875 N,N NA;NA NA SOCS2,LOC144481,CRADD IMR90 Hi-C 24141950 CRADD 233949 741 chr12 94330923 94336491 94332382 Y SOCS2 NA LOC144481,SOCS2,MRPL42,CRADD IMR90 Hi-C 24141950 CRADD 259772 742 chr12 94492262 94496680 94495009 N NA NA CRADD,LOC144481,SOCS2,MRPL42,UBE2N IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC41 357084 743 chr12 9518717 9521096 9519929 N NA NA NA NA NA NA LOC374443 279547 744 chr12 95822097 95823168 95822443 N NA METAP2 NR2C1 IMR90 Hi-C 24141950 METAP2 44654 745 chr12 96503150 96505354 96503556 N NA NA CDK17 IMR90 Hi-C 24141950 SNRPF 250441 746 chr12 9916153 9918789 9917489 Y KLRB1,CLEC2D,CLEC2D,CLEC2D,OLR1,KLRF1,GABARAPL1,CLEC7A,CLEC2B,CLEC12A,CD69 CD69 NA NA NA NA CD69 2656 747 chr12 9927153 9933462 9928427 N NA CD69 CD69 K562 ChIA-PET 22265404 CD69 13656 748 chr12 9944587 9950467 9947077 N NA CD69 CD69,CLEC7A K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CD69 31090 749 chr13 100085135 100088265 100086721 Y GPR183 NA MIR548AN,UBAC2,DOCK9,UBAC2-AS1,TM9SF2,GPR18 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TM9SF2 65463 750 chr13 100104647 100106680 100105185 N NA TM9SF2 TM9SF2,UBAC2,MIR548AN IMR90 Hi-C 24141950 TM9SF2 47048 751 chr13 108578556 108587642 108578878,108584200 N,N NA;NA NA NA NA NA NA LIG4 283074 752 chr13 108589232 108597152 108590479,108594606 N,N NA;NA NA FAM155A IMR90 Hi-C 24141950 LIG4 273564 753 chr13 108650709 108660547 108659163,108653510 N,N NA;NA NA FAM155A IMR90 Hi-C 24141950 LIG4 210169 754 chr13 109146793 109152654 109148398 N NA NA NA NA NA NA ABHD13 276030 755 chr13 110351599 110353393 110352688 Y NA NA MYO16 IMR90 Hi-C 24141950 IRS2 85521 756 chr13 110358178 110363806 110359545 Y IRS2 NA MYO16,IRS2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IRS2 75108 757 chr13 111596031 111598962 111596777 N NA ANKRD10 ANKRD10,ARHGEF7 IMR90 Hi-C 24141950 ANKRD10 28615 758 chr13 111604061 111609005 111607693 Y RAB20,ING1,ING1,ANKRD10 ANKRD10 ARHGEF7,ANKRD10 IMR90 Hi-C 24141950 ANKRD10 36645 759 chr13 111615130 111647971 111618402,111624026,111633926 N,Y,N NA;ING1,C13orf16;NA ANKRD10 LINC00346,ING1,ANKRD10,ARHGEF7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ANKRD10 47714 760 chr13 111657267 111660029 111658665 Y NA NA ANKRD10,ARHGEF7 IMR90 Hi-C 24141950 ANKRD10 89851 761 chr13 114983216 114989288 114988303 N NA CDC16 FAM70B,FLJ44054,RASA3,CDC16,GAS6,FLJ41484,LOC100506394 IMR90 Hi-C 24141950 CDC16 11074 762 chr13 19494397 19496883 19495320 N NA NA NA NA NA NA MPHOSPH8 710905 763 chr13 20174626 20186650 20176123 N NA MPHOSPH8 MPHOSPH8,ZMYM5 MCF7 ChIA-PET 22265404 MPHOSPH8 21138 764 chr13 22555686 22563321 22562836 N NA NA NA NA NA NA EFHA1 377331 765 chr13 22579333 22585145 22583839 Y EFHA1 NA NA NA NA NA EFHA1 400978 766 chr13 23422215 23423300 23422800 N NA NA EFHA1 IMR90 Hi-C 24141950 SACS 584541 767 chr13 23489089 23491300 23489836 N NA NA NA NA NA NA SACS 516541 768 chr13 23499235 23508574 23500557,23502131 Y,N NA;NA NA NA NA NA NA SACS 499267 769 chr13 24520604 24530008 24528454 Y PCOTH NA SPATA13,TNFRSF19 IMR90 Hi-C 24141950 SACS 512763 770 chr13 27548784 27551993 27550663 N NA NA RASL11A,USP12,RPL21,MTIF3 IMR90 Hi-C 24141950 USP12 194040 771 chr13 27555633 27558972 27557367 Y USP12,RPL21,RASL11A NA RASL11A,USP12,RPL21,MTIF3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP12 187061 772 chr13 27756199 27759382 27757342 N NA USP12 USP12,RASL11A,RPL21 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP12 10166 773 chr13 27935837 27938189 27936578 N NA NA USP12,RPL21,CDX2,LNX2,FLT3,GTF3A,MTIF3,ATP5EP2 IMR90 Hi-C 24141950 GTF3A 60492 774 chr13 29103974 29108659 29106750 N NA NA FLT1,PAN3,POMP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 POMP 124482 775 chr13 29146913 29161630 29149151,29157549 Y,N POMP;NA NA FLT1,PAN3,POMP IMR90 Hi-C 24141950 POMP 71511 776 chr13 29184975 29186672 29185941 Y POMP POMP FLT1,PAN3,POMP IMR90 Hi-C 24141950 POMP 46469 777 chr13 31618993 31620944 31620089 Y ALOX5AP NA TEX26-AS1,USPL1,ALOX5AP,HSPH1,HMGB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HSPH1 115173 778 chr13 42832386 42835534 42833866 N NA AKAP11 AKAP11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AKAP11 10755 779 chr13 44713643 44718716 44716286 N NA NA TSC22D1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NUFIP1 844897 780 chr13 44831589 44834168 44833399 Y C13orf31,CCDC122,C13orf31 NA SERP2,LINC00284,TSC22D1,NUFIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NUFIP1 729445 781 chr13 46777773 46788794 46786005 N NA LCP1 CPB2,LOC100509894 IMR90 Hi-C 24141950 LCP1 21314 782 chr13 46869383 46872636 46870541 N NA NA NA NA NA NA LCP1 112924 783 chr13 47681225 47686817 47685500 N NA NA NA NA NA NA ESD 309858 784 chr13 49512088 49513848 49512943 N NA FNDC3A FNDC3A K562 ChIA-PET 22265404 FNDC3A 36200 785 chr13 50782223 50831628 50783116,50819368 N,Y NA;KPNA3 NA DLEU7,DLEU2,DLEU1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLEU2 82546 786 chr13 50930197 51045560 50970644,50997022,50931819 N,N,N NA;NA;NA NA DLEU2,EBPL,DLEU7,CTAGE10P,DLEU1,TRIM13,RNASEH2B,GUCY1B2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 DLEU2 230520 787 chr13 52097537 52099537 52098595 N NA NA INTS6,WDFY2 MCF7,K562 ChIA-PET 22265404 WDFY2 58947 788 chr13 52115795 52117387 52116534 N NA WDFY2 MIR4703,WDFY2,INTS6,DHRS12,LINC00282 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 WDFY2 41097 789 chr13 60041317 60044577 60042738 N NA NA NA NA NA NA DIAPH3 693542 790 chr13 60841524 60846835 60841979 N NA NA NA NA NA NA DIAPH3 103405 791 chr13 64648338 64662926 64650199,64650829 N,N NA;NA NA NA NA NA NA TDRD3 3677747 792 chr13 69794756 69815109 69797091 N NA NA NA NA NA NA MZT1 3486829 793 chr13 74038954 74040707 74039582 N NA NA NA NA NA NA DIS3 682610 794 chr13 74213489 74215299 74214812 N NA NA NA NA NA NA DIS3 857145 795 chr13 75493759 75496154 75494616 N NA NA NA NA NA NA COMMD6 615837 796 chr13 77491045 77493145 77492149 N NA NA NA NA NA NA CLN5 72914 797 chr13 78051920 78053185 78052507 N NA NA NA NA NA NA MYCBP2 150743 798 chr13 81063197 81065429 81064413 N NA NA NA NA NA NA SPRY2 148111 799 chr13 81880014 81920326 81914504 N NA NA NA NA NA NA SPRY2 964928 800 chr13 81968837 81974186 81969610 N NA NA NA NA NA NA SPRY2 1053751 801 chr13 83031588 83034000 83032234 N NA NA NA NA NA NA SPRY2 2116502 802 chr13 83641947 83677209 83676291 N NA NA NA NA NA NA SPRY2 2726861 803 chr13 87533861 87535858 87535059 N NA NA NA NA NA NA MIR17HG 4464216 804 chr13 87730350 87733325 87732308 N NA NA NA NA NA NA MIR17HG 4266749 805 chr13 95200432 95202746 95201971 Y NA TGDS NA NA NA NA TGDS 45765 806 chr13 95313624 95316808 95314725 N NA NA TGDS,GPR180 IMR90 Hi-C 24141950 GPR180 59520 807 chr13 97793725 97808007 97794493 N NA NA MBNL2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MBNL2 66567 808 chr14 100651611 100661103 100653018,100659416 N,Y NA;NA DEGS2,YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DEGS2 25599 809 chr14 100676950 100683031 100680962 N NA YY1 DEGS2,YY1,EVL IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YY1 22071 810 chr14 101051829 101056950 101053116 N NA NA WDR25,MEG3,BEGAIN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLK1 136252 811 chr14 101227261 101229577 101228579 N NA DLK1 WDR25,LINC00523,DLK1,MEG3,MIR2392 IMR90 Hi-C 24141950 DLK1 34059 812 chr14 101233631 101245841 101237328 N NA DLK1 WDR25,LINC00523,DLK1 IMR90 Hi-C 24141950 DLK1 40429 813 chr14 101254077 101259195 101255556,101257360 N,N NA;NA NA WDR25,DLK1,LINC00523,WARS,MIR2392,MEG3,MEG8,RTL1 IMR90 Hi-C 24141950 DLK1 60875 814 chr14 101689885 101694187 101692094 N NA NA MEG8,DLK1,DIO3OS,MIR136,MIR665,RTL1,MIR127,MIR432,MIR337,MIR433,MIR431,MIR493,DIO3,MIR1247,MIR300,MIR1185-2,MIR487A,MIR889,MIR376A1,MIR655,MIR487B,MIR376A2,MIR654,MIR381,MIR376C,MIR539,MIR376B,MIR1185-1 IMR90 Hi-C 24141950 DLK1 496683 815 chr14 102137639 102141010 102140357 N NA NA MEG8,RTL1,LINC00523 IMR90 Hi-C 24141950 LINC00239 55764 816 chr14 102148675 102153246 102151545 N NA LINC00239 LINC00523 IMR90 Hi-C 24141950 LINC00239 43528 817 chr14 102176569 102184576 102177502,102181053 N,N NA;NA LINC00239,PPP2R5C PPP2R5C,LINC00239,HSP90AA1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00239 12198 818 chr14 102779838 102781630 102780691 Y NA ZNF839,CINP,TECPR2 DYNC1H1,HSP90AA1,WDR20,MOK,ZNF839 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF839 4466 819 chr14 102989859 102998356 102991461,102997371 N,Y NA;TRAF3,RCOR1 ANKRD9 ANKRD9,RCOR1,TECPR2,CDC42BPB,MIR4309,TRAF3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD9 13731 820 chr14 103538791 103543258 103541778 N NA CDC42BPB,EXOC3L4,TNFAIP2 CDC42BPB,EIF5 MCF7 ChIA-PET 22265404 CDC42BPB 15049 821 chr14 103557185 103558979 103558017 N NA CDC42BPB,EXOC3L4,TNFAIP2 CDC42BPB,EXOC3L4,TNFAIP2,EIF5,LOC100131366,MARK3 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EXOC3L4 7502 822 chr14 103666956 103686083 103671532,103673580,103675455 N,Y,Y NA;CDC42BPB;NA NA LOC100131366,EXOC3L4,CDC42BPB,TNFAIP2,EIF5,MARK3,RCOR1 IMR90 Hi-C 24141950 TNFAIP2 74292 823 chr14 103779697 103782692 103780712 N NA EIF5 EXOC3L4,RCOR1,EIF5,TRAF3,CDC42BPB,LOC100131366,TNFAIP2,MARK3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EIF5 17801 824 chr14 103843052 103845907 103844545 Y ZFYVE21,MARK3 EIF5,MARK3 MARK3,EIF5 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MARK3 5794 825 chr14 105316359 105320643 105319584 N NA ZBTB42,MGC23270,KIAA0284 AKT1,MGC23270,KIAA0284,AHNAK2,PLD4,GPR132,CDCA4,JAG2,NUDT14 IMR90 Hi-C 24141950 KIAA0284 11007 826 chr14 105542577 105564358 105544404,105559943,105553266 N,N,N NA;NA;NA NA AHNAK2,GPR132,BTBD6,BRF1,JAG2,NUDT14 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDCA4 55152 827 chr14 106659927 106663502 106660683 N NA NA NA NA NA NA LINC00221 274953 828 chr14 106855556 106857703 106857365 Y NA NA LINC00221 K562 ChIA-PET 22265404 LINC00221 80752 829 chr14 106872987 106895609 106873847 N NA LINC00221 NA NA NA NA LINC00221 42846 830 chr14 20643767 20647178 20646094 N NA NA NA NA NA NA TTC5 126975 831 chr14 23183323 23185669 23184484 N NA NA OXA1L,SLC7A7,DAD1,RBM23 IMR90 Hi-C 24141950 OXA1L 50062 832 chr14 23706502 23708708 23707077 N NA HOMEZ SLC7A8 IMR90 Hi-C 24141950 HOMEZ 46601 833 chr14 23922542 23924941 23923915 N NA NGDN BCL2L2-PABPN1,PPP1R3E,MYH7 IMR90 Hi-C 24141950 NGDN 13957 834 chr14 24050510 24054800 24050943,24053645 N,N NA;NA NA NA NA NA NA DHRS2 50773 835 chr14 24162283 24166141 24163938,24165788 Y,N NA;NA NA NA NA NA NA DHRS2 56710 836 chr14 27311027 27364287 27312612 N NA NA NA NA NA NA FOXG1 1871991 837 chr14 28313333 28318641 28314764 N NA NA NA NA NA NA FOXG1 917637 838 chr14 29298146 29324042 29299384,29300544 N,N NA;NA NA NA NA NA NA FOXG1 61868 839 chr14 30739978 30767938 30766351 N NA NA C14orf23 IMR90 Hi-C 24141950 G2E3 260391 840 chr14 30838466 30840649 30839369 N NA NA NA NA NA NA G2E3 187680 841 chr14 31697753 31701053 31699177 Y STRN3 HECTD1 AP4S1,HECTD1,HEATR5A,STRN3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HECTD1 21064 842 chr14 31706075 31709792 31709076 N NA HECTD1 HECTD1,STRN3 IMR90 Hi-C 24141950 HECTD1 29386 843 chr14 31712417 31714098 31713226 N NA HECTD1 NA NA NA NA HECTD1 35728 844 chr14 32362009 32364609 32363718 N NA NA AKAP6,NUBPL IMR90 Hi-C 24141950 ARHGAP5-AS1 181296 845 chr14 32434702 32436092 32435486 N NA NA NA NA NA NA ARHGAP5-AS1 109813 846 chr14 32669334 32672586 32670752,32672347 N,Y NA;ARHGAP5 NA NUBPL,ARHGAP5-AS1,ARHGAP5 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP5 122839 847 chr14 34434644 34436402 34435582 N NA EGLN3 EGLN3 K562 ChIA-PET 22265404 EGLN3 14360 848 chr14 34511740 34514753 34513072 N NA NA NA NA NA NA EGLN3 91456 849 chr14 34527577 34531172 34529506 Y EGLN3 NA EGLN3 K562,MCF7 ChIA-PET 22265404 EGLN3 107293 850 chr14 34800867 34802150 34801315 N NA NA SPTSSA MCF7 ChIA-PET 22265404 SPTSSA 129318 851 chr14 35820952 35823248 35821544 N NA NA KIAA0391,PSMA6,SNX6,PPP2R3C,NFKBIA IMR90 Hi-C 24141950 NFKBIA 50712 852 chr14 35824483 35826562 35825406 Y BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA NFKBIA PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA IMR90 Hi-C 24141950 NFKBIA 47398 853 chr14 35833574 35836946 35835926 N NA NFKBIA PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NFKBIA 37014 854 chr14 41096333 41100293 41098865 N NA NA NA NA NA NA FBXO33 1194629 855 chr14 44852285 44858217 44854717 N NA NA NA NA NA NA C14orf28 508290 856 chr14 50327719 50329440 50328832 N NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 8180 857 chr14 50329971 50336611 50334956 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 C14orf182,SOS2,METTL21D,ARF6,C14orf183,NEMF,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 10432 858 chr14 50505883 50507872 50507333 N NA C14orf182 C14orf182,ARF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C14orf182 31645 859 chr14 50510784 50512908 50512077 Y RPL36AL,ARF6,SOS2,C14orf182 C14orf182,C14orf183 C14orf182,ARF6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 C14orf182 36546 860 chr14 55568255 55571288 55570086 Y LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L MAPK1IP1L LGALS3,DLGAP5,MAPK1IP1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAPK1IP1L 49893 861 chr14 55573703 55576141 55574902 Y GCH1,MAPK1IP1L,FBXO34,FBXO34,LGALS3 NA MAPK1IP1L IMR90 Hi-C 24141950 MAPK1IP1L 55341 862 chr14 57456095 57460955 57459161 Y NA NA NA NA NA NA MUDENG 274651 863 chr14 57474567 57477335 57474898,57476782 N,N NA;NA NA NA NA NA NA MUDENG 258271 864 chr14 58636047 58638884 58638006 Y NA ACTR10 NA NA NA NA ACTR10 27949 865 chr14 60797452 60799775 60798362 N NA NA C14orf39,SIX6,TMEM30B IMR90 Hi-C 24141950 PPM1A 84982 866 chr14 65676435 65678840 65677832 N NA NA LOC645431,FUT8 IMR90 Hi-C 24141950 MAX 107208 867 chr14 65696259 65697822 65696833 N NA NA LOC645431,FUT8,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 127032 868 chr14 65709897 65712225 65710888 Y NA NA LOC645431,FUT8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 140670 869 chr14 67884736 67886995 67885526 N NA NA PLEK2,TMEM229B,PLEKHH1,PIGH,ARG2,VTI1B,RDH12 IMR90 Hi-C 24141950 EIF2S1 57702 870 chr14 69131544 69133917 69132604 N NA NA RAD51B,ZFP36L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 129043 871 chr14 69179129 69182739 69181171 N NA NA ZFP36L1,RAD51B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 80221 872 chr14 69193930 69199048 69194669 N NA NA RAD51B,ZFP36L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 63912 873 chr14 69213544 69217529 69216474 Y NA ZFP36L1 RAD51B,ZFP36L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 45431 874 chr14 69272371 69278544 69273817 N NA ZFP36L1 RAD51B,ZFP36L1 IMR90 Hi-C 24141950 ZFP36L1 9411 875 chr14 70720376 70724885 70721801 N NA NA ADAM21P1 IMR90 Hi-C 24141950 MED6 342499 876 chr14 71779048 71834240 71787677 N NA NA SIPA1L1,PCNX,LOC145474,SNORD56B IMR90 Hi-C 24141950 LOC145474 120338 877 chr14 73368890 73375717 73374122 N NA DCAF4 RGS6,DPF3,DCAF4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DCAF4 17323 878 chr14 75723664 75726898 75725861 N NA FOS,LOC731223 TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2,BATF,PGF IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOS 18583 879 chr14 75884029 75886837 75886073 N NA JDP2 TMED10,JDP2,NEK9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JDP2 7672 880 chr14 76722254 76768051 76724529,76725800 N,N NA;NA NA C14orf118,IFT43,ESRRB IMR90 Hi-C 24141950 ESRRB 69639 881 chr14 77421099 77435871 77423119,77425768,77428369 N,N,Y NA;NA;NA NA IRF2BPL,KIAA1737 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 59163 882 chr14 77442894 77445988 77444380 Y NA IRF2BPL IRF2BPL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 49046 883 chr14 77504828 77511531 77506823,77510527 N,N NA;NA IRF2BPL IRF2BPL IMR90 Hi-C 24141950 IRF2BPL 9794 884 chr14 89283902 89287020 89285998 N NA NA TTC8 MCF7 ChIA-PET 22265404 ZC3H14 254649 885 chr14 90844591 90851858 90849624 N NA C14orf102,CALM1 C14orf102,CALM1,TTC7B,EFCAB11,TDP1,PSMC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CALM1 11469 886 chr14 90966320 90970469 90967307 N NA NA NA NA NA NA CALM1 102993 887 chr14 91290886 91296286 91294602 N NA TTC7B TTC7B,RPS6KA5,CCDC88C,C14orf159 IMR90 Hi-C 24141950 TTC7B 8125 888 chr14 91891457 91897602 91892190 N NA CCDC88C CCDC88C IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC88C 7269 889 chr14 93251831 93252935 93252472 N NA GOLGA5 GOLGA5 K562 ChIA-PET 22265404 GOLGA5 7715 890 chr14 97128896 97131825 97130066 N NA NA NA NA NA NA VRK1 131859 891 chr14 99824741 99829595 99827484 Y NA NA NA NA NA NA SETD3 117631 892 chr15 101647067 101649545 101648689 N NA NA CHSY1,SELS,ASB7,LRRK1 IMR90 Hi-C 24141950 CHSY1 142592 893 chr15 101661659 101662968 101662001 N NA NA CHSY1,LRRK1,SELS IMR90 Hi-C 24141950 CHSY1 129169 894 chr15 102151778 102157314 102156276 Y NA TM2D3 PCSK6,SNRPA1,TM2D3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TM2D3 35280 895 chr15 23958944 23959711 23959436 N NA NA NA NA NA NA MKRN3 148490 896 chr15 26326737 26328898 26327518 Y NA NA LOC100128714,ATP10A,LOC503519 IMR90 Hi-C 24141950 UBE3A 642562 897 chr15 28700698 28703406 28702048 N NA NA NA NA NA NA HERC2 133403 898 chr15 29125420 29159552 29131139,29153382,29149956 N,N,N NA;NA;NA NA APBA2 K562 ChIA-PET 22265404 APBA2 54288 899 chr15 31115578 31124258 31116086 N NA NA NA NA NA NA FAN1 71818 900 chr15 35457900 35460773 35459152 N NA NA NA NA NA NA ZNF770 177403 901 chr15 36483576 36488410 36487646 N NA NA NA NA NA NA C15orf41 383402 902 chr15 36625358 36627377 36626466 N NA NA C15orf41,LOC100507466,CSNK1A1P1 IMR90 Hi-C 24141950 C15orf41 244435 903 chr15 36716638 36721991 36720680 Y NA NA ATPBD4,LOC100507466 IMR90 Hi-C 24141950 C15orf41 149821 904 chr15 36740910 36742452 36741653 N NA NA NA NA NA NA C15orf41 129360 905 chr15 38729388 38734480 38730394 N NA FAM98B C15orf53,SPRED1,RASGRP1,FAM98B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM98B 11848 906 chr15 38880964 38882492 38881490 N NA NA FAM98B,RASGRP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM98B 134636 907 chr15 43410074 43416157 43415331 Y NA UBR1,TMEM62 UBR1 K562 ChIA-PET 22265404 TMEM62 9565 908 chr15 45108764 45113990 45110198,45112935 N,N NA;NA NA SORD IMR90 Hi-C 24141950 B2M 105079 909 chr15 51942925 51945560 51944689 N NA DMXL2,SCG3 SCG3,LYSMD2,TMOD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DMXL2 27958 910 chr15 51962921 51967223 51965175 N NA DMXL2,SCG3 SCG3,LYSMD2,TMOD2,DMXL2 IMR90 Hi-C 24141950 SCG3 6327 911 chr15 52272951 52295384 52274244 N NA LEO1,MAPK6 MAPK6,GNB5,MYO5C,BCL2L10,LEO1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LEO1 8993 912 chr15 52300179 52303210 52301343 N NA LEO1,MAPK6 TMOD3,LEO1,MAPK6,BCL2L10,GNB5,MYO5C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAPK6 8201 913 chr15 57072360 57077166 57076273 N NA ZNF280D TCF12,ZNF280D IMR90 Hi-C 24141950 ZNF280D 46573 914 chr15 57621734 57622529 57622429 N NA LOC283663 CGNL1 IMR90 Hi-C 24141950 LOC283663 29171 915 chr15 57626061 57628164 57627177 N NA LOC283663 CGNL1 IMR90 Hi-C 24141950 LOC283663 33498 916 chr15 58398568 58406241 58402041,58404096,58400508 N,N,N NA;NA;NA ALDH1A2 ALDH1A2,AQP9 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ALDH1A2 40447 917 chr15 58597505 58626276 58623061,58624767 N,N NA;NA NA LIPC,ADAM10,FAM63B,SLTM IMR90 Hi-C 24141950 ALDH1A2 239384 918 chr15 58642779 58645966 58644267 N NA NA LIPC,ADAM10,FAM63B IMR90 Hi-C 24141950 ALDH1A2 284658 919 chr15 58695167 58697555 58695872 N NA NA LIPC,ADAM10,FAM63B IMR90 Hi-C 24141950 ALDH1A2 337046 920 chr15 58700981 58710363 58702614 N NA NA LIPC,ADAM10,FAM63B IMR90 Hi-C 24141950 ADAM10 331814 921 chr15 62410643 62412390 62411323 N NA NA NA NA NA NA VPS13C 57979 922 chr15 62676164 62684692 62682690 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 VPS13C 323500 923 chr15 63682286 63690385 63682594,63684533,63688450 N,N,N NA;NA;NA NA APH1B,CA12,LACTB,RAB8B,USP3,FBXL22,LOC100130855 IMR90 Hi-C 24141950 USP3 106325 924 chr15 63728374 63732315 63729249 N NA NA FBXL22,LOC100130855,USP3,CA12,APH1B,RAB8B,LACTB IMR90 Hi-C 24141950 USP3 64395 925 chr15 65185297 65190221 65186348,65188144 Y,Y ZNF609,OAZ2,PLEKHO2,SPG21,SPG21;ZNF609,OAZ2,PLEKHO2,SPG21,SPG21 NA SPG21 IMR90 Hi-C 24141950 PLEKHO2 51215 926 chr15 65509805 65511599 65510505 N NA CLPX CLPX,CILP,PARP16 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CLPX 32242 927 chr15 65586818 65589858 65588280 N NA PARP16 MTFMT,IGDCC4,PDCD7,RASL12,IGDCC3,OSTBETA,CILP,PARP16,CLPX,UBAP1L,DPP8,PTPLAD1,SPG21,KBTBD13 MCF7,K562 ChIA-PET 22265404 PARP16 7800 928 chr15 65595159 65598503 65596883 Y DENND4A PARP16 PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARP16 16141 929 chr15 66124413 66130570 66125166,66130169 Y,N NA;NA DENND4A,RAB11A SLC24A1,DENND4A,PTPLAD1,C15orf44,RAB11A,MEGF11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB11A 31227 930 chr15 66872731 66877760 66874445 N NA NA SMAD6,LCTL,ZWILCH IMR90 Hi-C 24141950 ZWILCH 75300 931 chr15 66912768 66953231 66914689,66947645,66923172,66916645 N,N,Y,N NA;NA;NA;NA SMAD6 SMAD6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD6 41443 932 chr15 67133503 67148377 67134974,67143858 N,N NA;NA NA SMAD6,SNAPC5,ZWILCH,LCTL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD6 138829 933 chr15 67184603 67189194 67187058 N NA NA IQCH,LOC100506686,SMAD6 IMR90 Hi-C 24141950 SMAD3 169001 934 chr15 68173747 68178455 68174928,68177031 Y,Y PIAS1,CALML4;NA NA PIAS1,CLN6,CALML4,C15orf61,LOC100506686,IQCH,SKOR1 IMR90 Hi-C 24141950 PIAS1 168117 935 chr15 68206068 68208629 68207419 N NA NA CALML4,CLN6,PIAS1,LOC100506686,IQCH IMR90 Hi-C 24141950 PIAS1 137943 936 chr15 70729975 70737373 70731906,70732608 N,N NA;NA NA TLE3,LOC145837,C15orf50 IMR90 Hi-C 24141950 TLE3 339719 937 chr15 70738812 70742096 70740476 N NA NA C15orf50 IMR90 Hi-C 24141950 TLE3 348556 938 chr15 70742790 70745808 70744792 N NA NA C15orf50,TLE3,KIF23,LOC145837 IMR90 Hi-C 24141950 TLE3 352534 939 chr15 70754079 70756834 70755673 Y TLE3 NA TLE3,C15orf50,KIF23,LOC145837 IMR90 Hi-C 24141950 TLE3 363823 940 chr15 74072996 74074320 74073553 N NA NA C15orf60 IMR90 Hi-C 24141950 NPTN 147243 941 chr15 75403930 75410248 75404821 Y SIN3A,SIN3A,MAN2C1,CLK3,CSK,C15orf39 NA SCAMP5,PPCDC,C15orf39 IMR90 Hi-C 24141950 C15orf39 83973 942 chr15 75415772 75418624 75417583 N NA NA PPCDC,MIR631,COMMD4,MAN2C1,NEIL1,SCAMP5,C15orf39 IMR90 Hi-C 24141950 C15orf39 75597 943 chr15 75441624 75445778 75442557 N NA C15orf39 PPCDC,C15orf39 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C15orf39 48443 944 chr15 75469138 75473350 75470897 Y SIN3A,SIN3A,MAN2C1,CSK,C15orf39 C15orf39 C15orf39 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C15orf39 20871 945 chr15 76121537 76125230 76124104 N NA UBE2Q2 UBE2Q2,DNM1P35 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 UBE2Q2 10392 946 chr15 77183430 77198546 77197748 N NA RCN2 C15orf27,SCAPER,ETFA IMR90 Hi-C 24141950 RCN2 25416 947 chr15 77861217 77862547 77861836 N NA NA PSTPIP1,TSPAN3,PEAK1 IMR90 Hi-C 24141950 LINGO1 62162 948 chr15 78026985 78031820 78030093 N NA NA NA NA NA NA LINGO1 102276 949 chr15 78228592 78238134 78237005 N NA NA TBC1D2B,DNAJA4,IDH3A,CIB2,IREB2,LOC91450,SH2D7,WDR61,LOC645752,ACSBG1 IMR90 Hi-C 24141950 TBC1D2B 131860 950 chr15 78596615 78600223 78598914 Y NA WDR61 WDR61,IDH3A,DNAJA4,IREB2,CRABP1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 WDR61 4675 951 chr15 79151216 79154125 79152779 Y IREB2 MORF4L1 MORF4L1,ADAMTS7 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 MORF4L1 11047 952 chr15 80269465 80270715 80269976 Y ZFAND6,BCL2A1 NA BCL2A1 K562 ChIA-PET 22265404 ST20-MTHFS 54017 953 chr15 81316675 81322130 81316983 Y STARD5,MESDC1 MESDC2,MESDC1 C15orf26,IL16 IMR90 Hi-C 24141950 MESDC1 23380 954 chr15 81384223 81387011 81384790 N NA C15orf26 IL16,C15orf26 IMR90 Hi-C 24141950 C15orf26 39633 955 chr15 81387518 81389949 81388297 N NA C15orf26 IL16,C15orf26 IMR90 Hi-C 24141950 C15orf26 36695 956 chr15 82129746 82163453 82163080 N NA NA NA NA NA NA MEX3B 174908 957 chr15 82232887 82238660 82234681,82237495 N,N NA;NA NA IL16,MEX3B,TMC3,EFTUD1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MEX3B 99701 958 chr15 82309811 82312011 82310821 N NA MEX3B NA NA NA NA MEX3B 26350 959 chr15 84976244 84976835 84976542 N NA NA NA NA NA NA LOC440300 115644 960 chr15 85267551 85279580 85278500 N NA SEC11A,ZNF592 SEC11A,ZNF592 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 SEC11A 7877 961 chr15 89106107 89108064 89107033 N NA DET1 NA NA NA NA DET1 16195 962 chr15 89481296 89484096 89482876 N NA HAPLN3,MFGE8 NA NA NA NA MFGE8 24633 963 chr15 89524615 89526899 89525854 N NA NA MFGE8,ABHD2 IMR90 Hi-C 24141950 MFGE8 67952 964 chr15 89532278 89539190 89533639 Y NA NA MFGE8,ABHD2,ISG20,HAPLN3,RLBP1 IMR90 Hi-C 24141950 MFGE8 75615 965 chr15 89544082 89547712 89546542 N NA NA MFGE8,ISG20,HAPLN3,ABHD2,RLBP1,ACAN IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ABHD2 83669 966 chr15 89559868 89561752 89560865 N NA NA MFGE8,HAPLN3,ABHD2,ACAN IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABHD2 69629 967 chr15 90684173 90686280 90685564 N NA IDH2,SEMA4B IQGAP1,IDH2,C15orf38-AP3S2,SEMA4B,CIB1,C15orf58,ZNF710,TTLL13 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IDH2 38465 968 chr15 90690853 90694322 90692653 N NA IDH2,SEMA4B IDH2,C15orf38-AP3S2,SEMA4B,IQGAP1,ZNF710,C15orf58,CIB1,TTLL13,MESP1,WDR93,NGRN IMR90 Hi-C 24141950 SEMA4B 33830 969 chr15 90708249 90710585 90709047 Y NA SEMA4B CIB1,C15orf58,SEMA4B,ZNF710,IDH2,TTLL13,NGRN IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SEMA4B 17567 970 chr15 90843927 90845685 90844708 N NA NGRN,ZNF774 NGRN,TTLL13,IQGAP1,CRTC3 IMR90 Hi-C 24141950 NGRN 35032 971 chr15 91383080 91386011 91384411 N NA FURIN,FES CRTC3,BLM,FURIN,FES IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FURIN 25874 972 chr15 93276458 93279255 93277524 N NA NA SLCO3A1 IMR90 Hi-C 24141950 LOC100507217 146818 973 chr15 93372224 93376888 93375138 Y NA LOC100507217 LOC100507217,CHD2,ASB9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100507217 49185 974 chr15 93391034 93393544 93392313 N NA LOC100507217 CHD2,LOC100507217 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100507217 32529 975 chr15 95386996 95390167 95388411 N NA NA NA NA NA NA NR2F2 1478990 976 chr15 95396893 95438893 95399378 N NA NA NA NA NA NA NR2F2 1430264 977 chr15 95712843 95740861 95714007,95740352 N,N NA;NA NA NR2F2 IMR90 Hi-C 24141950 NR2F2 1128296 978 chr15 96181610 96267684 96181907,96228050 N,N NA;NA NA NR2F2,LOC400456 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NR2F2 601473 979 chr15 96471933 96473911 96472797 N NA NA NR2F2,LOC400456 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 NR2F2 395246 980 chr15 96595612 96597938 96596687 N NA NA NR2F2,LOC400456,LOC145820 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NR2F2 271219 981 chr15 96638950 96679346 96678864 N NA NA NR2F2,LOC400456 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 NR2F2 189811 982 chr15 96753606 96818388 96817201 N NA NA NR2F2,LOC400456 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 NR2F2 50769 983 chr15 97033997 97057075 97035204 N NA NA NA NA NA NA NR2F2 164840 984 chr15 98619046 98621302 98620254 N NA NA NA NA NA NA ARRDC4 115113 985 chr16 10455625 10457786 10456493 N NA ATF7IP2 ATF7IP2,C4orf51 K562,MCF7 ChIA-PET 22265404,19890323 ATF7IP2 22126 986 chr16 11316825 11320085 11318168 Y NA SOCS1 CLEC16A,SOCS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS1 29954 987 chr16 11405805 11407626 11406686 N NA RMI2 CLEC16A IMR90 Hi-C 24141950 RMI2 31685 988 chr16 11538562 11589311 11587854 N NA NA SNN,TXNDC11,LITAF,ZC3H7A,BCAR4,CLEC16A IMR90 Hi-C 24141950 LITAF 92011 989 chr16 11690157 11724578 11704661,11707129,11721564,11709734,11718629 N,N,N,Y,Y NA;NA;NA;RUNDC2A;SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN LITAF,SNN LITAF,TXNDC11,SNN,CLEC16A,RSL1D1,BCAR4,PRM2,PRM1,ZC3H7A MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LITAF 8835 990 chr16 11733039 11736012 11734359 Y SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN SNN TXNDC11,SNN,CLEC16A,LITAF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SNN 26277 991 chr16 12704740 12709915 12706773 N NA NA SNX29,CPPED1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CPPED1 187829 992 chr16 1337178 1350936 1349493,1346997 Y,N NA;NA UBE2I,BAIAP3 UBE2I,UNKL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 UBE2I 8218 993 chr16 13870410 13876505 13873731 Y NA NA NA NA NA NA ERCC4 137509 994 chr16 14499053 14500393 14499726 N NA NA PARN,MIR193B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARN 223735 995 chr16 15350819 15351822 15351140 N NA NA NA NA NA NA RRN3 162661 996 chr16 15990301 15993134 15991848 N NA FOPNL MYH11,FOPNL,ABCC1,ABCC6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOPNL 7854 997 chr16 17105826 17138051 17107784,17125811,17109609 N,N,N NA;NA;NA NA NA NA NA NA ABCC1 1062392 998 chr16 17683895 17686766 17685231 Y NA NA NA NA NA NA RPS15A 1114890 999 chr16 18301118 18311398 18306537 N NA NA NA NA NA NA RPS15A 490258 1000 chr16 18953832 18958350 18957589 N NA SMG1 SMG1,RPS15A,ARL6IP1,GDE1,CCP110 IMR90 Hi-C 24141950 SMG1 16106 1001 chr16 20759185 20766752 20766448 N NA THUMPD1,ACSM3 ERI2,ACSM3,THUMPD1 IMR90 Hi-C 24141950 THUMPD1 5986 1002 chr16 21547253 21549156 21548179 N NA SLC7A5P2 NA NA NA NA SLC7A5P2 15488 1003 chr16 22199104 22208546 22202691,22207003 Y,N POLR3E,CDR2;NA EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 9046 1004 chr16 23279683 23281483 23280877 N NA NA SCNN1B IMR90 Hi-C 24141950 USP31 119092 1005 chr16 23737272 23741894 23739307,23741308 N,N NA;NA PLK1 ERN2,PRKCB IMR90 Hi-C 24141950 PLK1 47071 1006 chr16 23813348 23816293 23815050 N NA PRKCB PRKCB,CHP2 IMR90 Hi-C 24141950 PRKCB 31007 1007 chr16 23831308 23839644 23833417,23838099 N,Y NA;GGA2 PRKCB PRKCB K562 ChIA-PET 22265404 PRKCB 7656 1008 chr16 25076904 25094619 25078525 N NA LOC554206,LCMT1 LCMT1,LOC100506655,TNRC6A,ARHGAP17,SLC5A11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LCMT1 28428 1009 chr16 25115468 25120301 25118522 N NA LCMT1 ARHGAP17,LCMT1,ZKSCAN2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LCMT1 2746 1010 chr16 27195738 27197346 27196527 N NA JMJD5 HS3ST4,IL21R,NSMCE1,LOC283888 IMR90 Hi-C 24141950 JMJD5 17461 1011 chr16 27208135 27212072 27210325 N NA JMJD5 NA NA NA NA JMJD5 2735 1012 chr16 29038750 29041870 29040812 N NA LAT SPNS1,NFATC2IP IMR90 Hi-C 24141950 LAT 42603 1013 chr16 2913409 2919618 2918335 N NA PRSS21,FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 13578 1014 chr16 29163878 29164865 29164161 N NA NA SPNS1,RRN3P2 IMR90 Hi-C 24141950 LAT 167731 1015 chr16 29265570 29307875 29276412,29272844,29302502 N,N,N NA;NA;NA NA RRN3P2,SNX29P2 IMR90 Hi-C 24141950 LAT 269423 1016 chr16 29403700 29406213 29405215 N NA NA NA NA NA NA SPN 268087 1017 chr16 29633258 29636334 29634221 N NA SPN NA NA NA NA SPN 37966 1018 chr16 29651535 29667702 29661223,29657235,29666373 N,N,N NA;NA;NA SPN,QPRT SPN K562 ChIA-PET 22265404 SPN 6598 1019 chr16 29953813 29956484 29955522 N NA KCTD13,TMEM219,TAOK2 MVP,KCTD13,ZG16,PRRT2,MAZ,KIF22,C16orf54,LOC440356,ASPHD1,SEZ6L2,CDIPT,TMEM219,TAOK2,HIRIP3,INO80E,ALDOA IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KCTD13 16268 1020 chr16 30150902 30151888 30151320 N NA YPEL3,GDPD3,MAPK3 NA NA NA NA MAPK3 16272 1021 chr16 30639858 30650773 30645771 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF785,ZNF689,PRR14,FBRS PPP4C,ZNF48,ZNF771,ITGAL,PRR14,MYLPF,TBC1D10B,DCTPP1,SEPHS2,ZNF747,ZNF768,ZNF689,ZNF785,ZNF688,FBRS,SRCAP,TBX6,GDPD3,YPEL3,MAPK3,SEPT1,ZNF764 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRR14 11468 1022 chr16 30813164 30821365 30817362,30820257 N,N NA;NA RNF40,C16orf93,ZNF629 C16orf93,PHKG2,RNF40,ZNF629,MIR762,BCL7C,CTF1,MIR4519,FBXL19-AS1,FBXL19,SRCAP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF629 14641 1023 chr16 30824328 30833788 30825804,30825913 Y,Y NA;NA ZNF629 ZNF629,RNF40,MIR4519 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF629 25805 1024 chr16 31264037 31265991 31265115 Y STX4,ZNF668,ZNF646,MYST1,ITGAX,PYCARD,ITGAM PYCARD NA NA NA NA PYCARD 49940 1025 chr16 3221919 3226390 3225532,3222019 N,N NA;NA ZNF213 NA NA NA NA ZNF213 36862 1026 chr16 3231232 3234972 3233391 N NA ZNF213 ZNF263,ZNF200 MCF7,K562 ChIA-PET 22265404 ZNF213 46175 1027 chr16 3236800 3240780 3239456,3238067 N,Y NA;NA ZNF200 ZNF200 K562 ChIA-PET 22265404 ZNF200 44677 1028 chr16 33503218 33511106 33509728 Y NA NA NA NA NA NA ZNF267 1618139 1029 chr16 4333335 4360538 4357728 Y CORO7 LOC100507501,TFAP4,GLIS2,PAM16 CREBBP,ADCY9,SRL,VASN,GLIS2,PAM16,CORO7-PAM16,TRAP1,TFAP4,LOC100507501,HMOX2,NMRAL1,DNAJA3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TFAP4 10334 1030 chr16 47071134 47072608 47071660 N NA NA ABCC11,DNAJA2,NETO2,ITFG1,PHKB,ABCC12 IMR90 Hi-C 24141950 DNAJA2 63509 1031 chr16 48531127 48537119 48536052 N NA NA MIR548AE2,SIAH1,ABCC11,N4BP1 IMR90 Hi-C 24141950 N4BP1 107001 1032 chr16 49912979 49919093 49918054 N NA NA ZNF423 IMR90 Hi-C 24141950 CNEP1R1 140096 1033 chr16 50422962 50425573 50423967 N NA BRD7 NA NA NA NA BRD7 20117 1034 chr16 50914594 50917129 50915694 N NA NA NA NA NA NA CYLD 138633 1035 chr16 54917788 54918913 54918529 N NA CRNDE,IRX5 FTO,IRX3 IMR90 Hi-C 24141950 CRNDE 44166 1036 chr16 56025304 56027679 56026017 N NA NA GNAO1,LOC283856 IMR90 Hi-C 24141950 AMFR 431765 1037 chr16 57333213 57334961 57334169 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,POLR2C,DOK4,CCDC102A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,GPR114 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 54175 1038 chr16 57842718 57846507 57844346 N NA KIFC3 NA NA NA NA KIFC3 6279 1039 chr16 57849601 57851148 57850377 N NA KIFC3 NA NA NA NA KIFC3 13162 1040 chr16 58492423 58494395 58493425 Y NDRG4,NDRG4,NDRG4 NA NA NA NA NA SETD6 54988 1041 chr16 63162750 63165226 63163430 N NA NA NA NA NA NA TK2 3419089 1042 chr16 65802685 65804872 65803590 N NA NA LOC283867 IMR90 Hi-C 24141950 TK2 779443 1043 chr16 66007022 66010082 66009165 N NA NA LOC283867 IMR90 Hi-C 24141950 TK2 574233 1044 chr16 67547429 67555908 67555278,67548439 N,N NA;NA ATP6V0D1,FAM65A,CTCF AGRP,TSNAXIP1,GFOD2,RANBP10,PSKH1,CTCF,C16orf48,C16orf86 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM65A 6809 1045 chr16 68559862 68561222 68560336 N NA ZFP90 CDH1 IMR90 Hi-C 24141950 ZFP90 12439 1046 chr16 68757919 68760560 68758867 N NA NA ZFP90,CDH3,CDH1,HAS3 IMR90 Hi-C 24141950 TMCO7 116949 1047 chr16 68765055 68767715 68766173 Y NA NA CDH3,CDH1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMCO7 109794 1048 chr16 69562871 69565937 69564162 N NA NFAT5 NFAT5,CYB5B,TERF2,MIR1538 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAT5 33932 1049 chr16 72667894 72728143 72698946,72690834,72688276,72675504,72695792 N,N,N,N,N NA;NA;NA;NA;NA NA ZFHX3 IMR90 Hi-C 24141950 TXNL4B 539679 1050 chr16 74872435 74873601 74873050 N NA NA RFWD3,FA2H,WDR59 IMR90 Hi-C 24141950 MLKL 137646 1051 chr16 76668460 76677112 76668925 N NA NA NA NA NA NA SYCE1L 556237 1052 chr16 79433954 79436361 79434827 N NA NA WWOX IMR90 Hi-C 24141950 CENPN 1603742 1053 chr16 79445638 79448298 79446757 N NA NA NA NA NA NA CENPN 1591805 1054 chr16 79780573 79809979 79803628 N NA NA WWOX,MAF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CENPN 1230124 1055 chr16 79866809 79881953 79877023 N NA NA NA NA NA NA CENPN 1158150 1056 chr16 79892093 79899547 79897885 N NA NA NA NA NA NA CENPN 1140556 1057 chr16 79900416 79904939 79903744 N NA NA WWOX IMR90 Hi-C 24141950 CENPN 1135164 1058 chr16 80002680 80008002 80005475,80006120 N,N NA;NA NA WWOX IMR90 Hi-C 24141950 CENPN 1032101 1059 chr16 80010730 80013216 80012302 N NA NA WWOX IMR90 Hi-C 24141950 CENPN 1026887 1060 chr16 8110247 8163951 8160071,8163057 N,Y NA;NA NA NA NA NA NA METTL22 551576 1061 chr16 81778749 81781637 81779906 N NA NA GAN,ATMIN,PKD1L2,BCMO1,MIR4720,CMIP IMR90 Hi-C 24141950 CMIP 299974 1062 chr16 81784609 81790506 81786034 Y PLCG2,CMIP,CMIP NA ATMIN,PKD1L2,GAN,BCMO1,MIR4720 IMR90 Hi-C 24141950 CMIP 305834 1063 chr16 84568908 84572687 84571160 N NA KIAA1609 KIAA1609,COTL1,USP10 IMR90 Hi-C 24141950 KIAA1609 30620 1064 chr16 84839529 84841702 84840087 N NA NA USP10,CRISPLD2,ZDHHC7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 USP10 105974 1065 chr16 84985418 84987594 84986547 N NA NA NA NA NA NA ZDHHC7 57547 1066 chr16 85435248 85438776 85436774 N NA NA LOC727710,GINS2,KIAA0182,FAM92B,LOC400548 IMR90 Hi-C 24141950 LINC00311 118684 1067 chr16 85449347 85586529 85570604,85496243,85471080,85450117,85557367 Y,N,Y,Y,Y NA;NA;NA;NA;NA NA LOC727710,GINS2,KIAA0182,FAM92B,LOC400548,C16orf74,LINC00311,ZDHHC7,KIAA0513,COX4NB IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KIAA0182 58500 1068 chr16 86697306 86699840 86698296 Y NA NA FOXL1,FLJ30679,MTHFSD,FOXC2,C16orf95,FBXO31 IMR90 Hi-C 24141950 FLJ30679 108380 1069 chr16 86961079 86964175 86963001 Y NA NA FOXL1,FOXC2,MTHFSD,FLJ30679 IMR90 Hi-C 24141950 FLJ30679 372153 1070 chr16 87832452 87842151 87840559 Y SLC7A5 KLHDC4 SLC7A5 MCF7 ChIA-PET 22265404 KLHDC4 32854 1071 chr16 88296910 88302504 88298930 N NA NA BANP,ZNF469,CA5A IMR90 Hi-C 24141950 ZFPM1 217510 1072 chr16 88319457 88321966 88320555 N NA NA BANP,ZNF469,CA5A,KLHDC4 IMR90 Hi-C 24141950 ZFPM1 198048 1073 chr16 88339959 88341688 88340768 N NA NA BANP IMR90 Hi-C 24141950 ZFPM1 178326 1074 chr16 88347800 88352221 88349514 N NA NA BANP,CA5A IMR90 Hi-C 24141950 ZFPM1 167793 1075 chr16 89056691 89062316 89059446,89061630 N,N NA;NA CBFA2T3 CBFA2T3,ACSF3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CBFA2T3 13187 1076 chr16 89063238 89075042 89066139,89070203,89074114 N,N,N NA;NA;NA CBFA2T3 CBFA2T3,ACSF3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CBFA2T3 19734 1077 chr16 89078367 89092124 89084827,89086723 N,N NA;NA CBFA2T3 ACSF3,CBFA2T3,LINC00304,LOC400558 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CBFA2T3 34863 1078 chr16 89116488 89120688 89119442 N NA ACSF3 CBFA2T3,ACSF3,CDH15,PIEZO1,LOC400558,SLC22A31,TRAPPC2L,GALNS,LINC00304 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACSF3 39529 1079 chr16 90148334 90150953 90148874 N NA LOC100130015 GAS8,DBNDD1,PRDM7,LOC100130015 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100130015 34301 1080 chr16 90229966 90230493 90230132 N NA NA NA NA NA NA LOC100130015 115933 1081 chr16 90232688 90236028 90233634 N NA NA NA NA NA NA LOC100130015 118655 1082 chr16 90255829 90257394 90256650 N NA NA NA NA NA NA LOC100130015 141796 1083 chr16 9085267 9087114 9085995 N NA USP7 USP7,C16orf72 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP7 27926 1084 chr16 9135823 9173645 9162322,9172787,9167023,9161460 Y,N,N,N NA;NA;NA;NA C16orf72 USP7,C16orf72 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C16orf72 11892 1085 chr16 9689561 9693792 9692132 N NA NA NA NA NA NA C16orf72 504024 1086 chr17 1155742 1157972 1157256 N NA NA ABR,YWHAE,PITPNA,INPP5K,LOC100306951,SCARF1,RILP,TUSC5,BHLHA9,CRK,SLC43A2 IMR90 Hi-C 24141950 YWHAE 145584 1087 chr17 12342165 12343700 12342468 N NA NA FLJ34690 IMR90 Hi-C 24141950 MAP2K4 418030 1088 chr17 13916120 13923852 13923205 N NA COX10 HS3ST3A1 IMR90 Hi-C 24141950 COX10 48867 1089 chr17 15789186 15790233 15789215 N NA NA NA NA NA NA ADORA2B 57998 1090 chr17 16419085 16421492 16419968 N NA NA FAM211A,CENPV,UBB,TRPV2,C17orf76-AS1,ZNF287 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C17orf76-AS1 76784 1091 chr17 16930702 16932789 16931591,16931589 N,N NA;NA MPRIP MPRIP,COPS3 IMR90 Hi-C 24141950 MPRIP 13285 1092 chr17 19014389 19016101 19015153 N NA NA NA NA NA NA FAM83G 106329 1093 chr17 20704189 20705816 20705216 N NA NA NA NA NA NA USP22 240536 1094 chr17 20810996 20822984 20811959 N NA NA USP22,SPECC1 IMR90 Hi-C 24141950 USP22 123368 1095 chr17 20984237 20986827 20985449 N NA USP22,DHRS7B USP22,C17orf51 IMR90 Hi-C 24141950 USP22 37885 1096 chr17 20997636 21005010 21002949 N NA DHRS7B C17orf51,USP22,C17orf103 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DHRS7B 25231 1097 chr17 21175021 21182541 21179204 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 C17orf103,MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 5427 1098 chr17 21511062 21533715 21516016,21517896 Y,N NA;NA NA CCDC144NL,MAP2K3,KCNJ12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C17orf51 56121 1099 chr17 21667860 21681587 21668816 N NA NA NA NA NA NA C17orf51 212919 1100 chr17 21848481 21851341 21850052 N NA NA NA NA NA NA FLJ36000 52721 1101 chr17 25387020 25425741 25416440 Y NA NA NA NA NA NA WSB1 195365 1102 chr17 25662781 25682399 25680835 Y NA WSB1 WSB1,MIR4522,KSR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 41675 1103 chr17 25694193 25695240 25694223 N NA NA KSR1 IMR90 Hi-C 24141950 WSB1 73087 1104 chr17 25707303 25709596 25707762 N NA NA KSR1 IMR90 Hi-C 24141950 WSB1 86197 1105 chr17 26283128 26285172 26284432 N NA NA NA NA NA NA C17orf108 62719 1106 chr17 26294232 26304138 26295425,26297824 N,N NA;NA NA C17orf108,NLK IMR90 Hi-C 24141950 NLK 65550 1107 chr17 26308716 26316177 26313176 N NA NA C17orf108,NOS2,NLK IMR90 Hi-C 24141950 NLK 53511 1108 chr17 26358759 26362432 26361371 Y NA NLK NA NA NA NA NLK 7256 1109 chr17 28670544 28672811 28672036 N NA CPD NSRP1,EFCAB5,MIR3184,SLC6A4,BLMH,TMIGD1,CPD,GOSR1,SUZ12P IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CPD 33131 1110 chr17 29378305 29380705 29379326 N NA NF1 NF1,TEFM,ADAP2,MIR4733,OMG,RAB11FIP4 IMR90 Hi-C 24141950 NF1 41240 1111 chr17 31220331 31226455 31221344,31224643 N,Y NA;NA MYO1D,TMEM98 MYO1D,ACCN1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MYO1D 16429 1112 chr17 31230216 31231672 31231082 N NA MYO1D,TMEM98 MYO1D,ACCN1 IMR90 Hi-C 24141950 TMEM98 23256 1113 chr17 31236680 31240237 31239498,31237105 N,N NA;NA MYO1D,TMEM98 MYO1D,ACCN1,TMEM98 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM98 14691 1114 chr17 32712888 32714768 32714180 N NA NA ACCN1,CCT6B,ZNF830,NLE1 IMR90 Hi-C 24141950 ZNF830 573781 1115 chr17 32738382 32741885 32740707 N NA NA NLE1,TMEM132E,CCT6B,ZNF830,FNDC8 IMR90 Hi-C 24141950 ZNF830 546664 1116 chr17 35076964 35090355 35078712,35084456 Y,N NA;NA NA LHX1,AATF,ACACA,MRM1,DHRS11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MRM1 118939 1117 chr17 35276999 35279238 35278515 N NA AATF LHX1,AATF MCF7 ChIA-PET 22265404 AATF 26937 1118 chr17 35284206 35286139 35285409 N NA AATF NA NA NA NA AATF 20036 1119 chr17 37155298 37161711 37159156 N NA NA PLXDC1,LOC100131347,MIR4727,CWC25,C17orf98,RPL23,LASP1,LOC100505576,FBXO47,FLJ43826,STAC2,RPL19,ARL5C,CACNB1,FBXL20,CDK12,PIP4K2B IMR90 Hi-C 24141950 LOC100505576 73877 1120 chr17 37168767 37172899 37171238 N NA NA PLXDC1,LOC100131347,FLJ43826,FBXL20,FBXO47,CACNB1,CWC25,PIP4K2B,ARL5C,LOC100505576,RPL19 IMR90 Hi-C 24141950 LOC100505576 87346 1121 chr17 37182846 37184080 37183740 N NA NA NA NA NA NA LOC100505576 101425 1122 chr17 37773818 37775133 37774327 N NA STARD3,TCAP,PNMT NA NA NA NA STARD3 18200 1123 chr17 3871047 3874066 3872662 N NA ATP2A3 ZZEF1,ATP2A3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ATP2A3 3289 1124 chr17 3875899 3878852 3877690 N NA ATP2A3 ZZEF1,ATP2A3 K562,MCF7 ChIA-PET 22265404 ATP2A3 8141 1125 chr17 39799872 39802604 39802254 Y NKIRAS2,NKIRAS2,DHX58,EIF1 EIF1 KRT19,KRT15,LOC147093 MCF7 ChIA-PET 22265404 EIF1 42523 1126 chr17 39818477 39826903 39822849 Y NA EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1,KRTAP3-2,KRTAP3-3 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 18224 1127 chr17 39833524 39835493 39834684 N NA EIF1 SMARCE1,KRT222,KRT28,KRT26,KRT27,TMEM99,KRT10,KRT20,KRTAP3-2,KRTAP3-3,EIF1,KRT19,HAP1,JUP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EIF1 9634 1128 chr17 41391592 41394765 41393131 N NA TMEM106A BRCA1,NBR2,NBR1,RND2,VAT1,IFI35,RPL27,TMEM106A,LOC100130581 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 27698 1129 chr17 41399000 41402097 41400483 N NA TMEM106A IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581,DHX8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM106A 35106 1130 chr17 41420028 41423180 41423017 N NA LOC100130581 NBR1 IMR90 Hi-C 24141950 LOC100130581 43086 1131 chr17 41631622 41636970 41633802 N NA ETV4 NA NA NA NA ETV4 7860 1132 chr17 41795937 41800107 41798614 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 DUSP3 56261 1133 chr17 42214293 42216452 42215656 Y C17orf53 HDAC5,C17orf53,C17orf65,TMUB2 C17orf53 MCF7 ChIA-PET 22265404 C17orf53 2822 1134 chr17 42354459 42358648 42357341 Y TMUB2,TMUB2,GPATCH8,GRN SLC4A1,SLC25A39 SLC4A1,RUNDC3A,SLC25A39,GRN,FAM171A2,ITGA2B,UBTF IMR90 Hi-C 24141950 SLC4A1 8957 1135 chr17 42363733 42367354 42366018 Y UBTF,SLC4A1,SLC25A39 SLC4A1,SLC25A39 SLC4A1,RUNDC3A,UBTF,SLC25A39,ATXN7L3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC4A1 18231 1136 chr17 42623943 42625763 42624604 Y TMUB2,TMUB2,GRN GPATCH8,FZD2 GPATCH8,FZD2,ITGA2B,DBF4B,C17orf104,CCDC43 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FZD2 9049 1137 chr17 43409328 43419237 43410550 N NA MAP3K14 MAP3K14,LOC100133991,HEXIM1,FMNL1,ARHGAP27,TEX34 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K14 14914 1138 chr17 43613493 43615240 43614577 N NA PLEKHM1 NA NA NA NA PLEKHM1 45347 1139 chr17 44342710 44346903 44344305 Y NA KANSL1 KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KANSL1 39970 1140 chr17 44566789 44568580 44567796 N NA NA NA NA NA NA KANSL1 264049 1141 chr17 45274282 45276164 45274957 N NA CDC27,MYL4 CDC27,MYL4,ITGB3,C17orf57,NPEPPS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC27 7617 1142 chr17 45945090 45957594 45955914 N NA OSBPL7,MRPL10,SCRN2,SP6,SP2 SNX11,SP2,SP6,SCRN2,MRPL10,LRRC46,PNPO,CDK5RAP3,TBX21 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SP6 11850 1143 chr17 46554772 46556560 46556161 N NA NA SKAP1,HOXB3,HOXB-AS3,HOXB5,HOXB6,HOXB13,HOXB1,HOXB2,HOXB4,TTLL6 IMR90 Hi-C 24141950 HOXB2 65833 1144 chr17 46565148 46571663 46566368,46569658 N,N NA;NA NA SKAP1,HOXB3,HOXB-AS3,HOXB6,HOXB5,HOXB2,HOXB4,MIR10A,HOXB9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HOXB2 50730 1145 chr17 46574893 46579708 46578471 N NA HOXB2 HOXB3,HOXB-AS3,HOXB6,HOXB5,SKAP1,HOXB2,HOXB4,MIR10A,HOXB1,HOXB8,HOXB7 IMR90 Hi-C 24141950 HOXB2 42685 1146 chr17 47048719 47051626 47049870 Y IGF2BP1,SNF8 SNF8,IGF2BP1 IGF2BP1 MCF7 ChIA-PET 22265404 IGF2BP1 23148 1147 chr17 48284805 48295868 48287149 N NA NA SGCA,HILS1,PDK2,ITGA3,COL1A1,PPP1R9B,TMEM92,XYLT2,LOC284080,SAMD14 IMR90 Hi-C 24141950 PPP1R9B 56928 1148 chr17 48908227 48910441 48908980 N NA LOC400604,TOB1 TOB1,LOC400604,SPAG9,LINC00483 IMR90 Hi-C 24141950 LOC400604 33599 1149 chr17 49007490 49009909 49008961 N NA NA WFIKKN2,LOC400604,TOB1,SPAG9,LINC00483,ANKRD40 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 62151 1150 chr17 51825101 51828146 51826405 N NA NA NA NA NA NA TOM1L1 1149906 1151 chr17 52934203 52939990 52938844 N NA TOM1L1 NA NA NA NA TOM1L1 38062 1152 chr17 52941356 52943099 52942221 N NA TOM1L1 NA NA NA NA TOM1L1 34953 1153 chr17 53314565 53317601 53315829 Y HLF NA STXBP4,HLF IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MMD 181740 1154 chr17 53643731 53646368 53644928 N NA NA PCTP IMR90 Hi-C 24141950 MMD 144390 1155 chr17 53652729 53655451 53654471 N NA NA PCTP IMR90 Hi-C 24141950 MMD 153388 1156 chr17 53814008 53817045 53815579 N NA PCTP PCTP,TMEM100 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PCTP 11295 1157 chr17 53892647 53927798 53894346 N NA NA ANKFN1 IMR90 Hi-C 24141950 PCTP 64307 1158 chr17 58203759 58213061 58212728 N NA HEATR6 C17orf64,HEATR6,LOC645638,USP32,APPBP2,LOC653653 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEATR6 47467 1159 chr17 60246493 60250204 60247927 Y MED13 NA NA NA NA NA MED13 103850 1160 chr17 60254538 60258453 60257103 Y NA NA NA NA NA NA MED13 111895 1161 chr17 62978117 62983475 62982167 Y DDX5,CEP95,GNA13 AMZ2P1 AMZ2P1,GNA13 K562,MCF7 ChIA-PET 22265404 AMZ2P1 6414 1162 chr17 63057743 63061851 63060787 N NA GNA13 AMZ2P1,GNA13,RGS9 IMR90 Hi-C 24141950 GNA13 4823 1163 chr17 63096240 63097827 63096757 N NA GNA13 RGS9,LRRC37A3,GNA13,AMZ2P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GNA13 43320 1164 chr17 63115626 63120313 63119563 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 62706 1165 chr17 65778675 65782243 65780168 N NA BPTF BPTF IMR90 Hi-C 24141950 BPTF 39537 1166 chr17 66015206 66026286 66016190,66025880 Y,N NA;NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 5562 1167 chr17 6655316 6656462 6656065 Y RNASEK,GABARAP,XAF1 NA XAF1,MIR4520A,ALOX15P1,MIR4520B,MED31,C17orf100,FBXO39,TEKT1 IMR90 Hi-C 24141950 MED31 100362 1168 chr17 66755116 66756170 66755875 N NA NA FAM20A,ABCA10,ABCA9,ABCA8,PRKAR1A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABCA8 195363 1169 chr17 66770337 66772891 66771058 N NA NA FAM20A,ABCA9,ABCA10,ABCA8 IMR90 Hi-C 24141950 ABCA8 178642 1170 chr17 67321687 67324862 67323367 N NA NA KCNJ16,UNK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ABCA8 370154 1171 chr17 6844047 6845235 6844717 N NA NA ALOX12,LOC100506713 K562 ChIA-PET 22265404 ALOX12 54149 1172 chr17 73186598 73188206 73187853 N NA HN1,SUMO2,NUP85 SUMO2,KCTD2,ATP5H,SLC16A5,ARMC7,HN1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SUMO2 7500 1173 chr17 73444122 73445794 73444671 N NA GRB2,KIAA0195 GRB2,MIR3678,KIAA0195,LLGL2,TSEN54,CASKIN2,MYO15B IMR90 Hi-C 24141950 KIAA0195 6870 1174 chr17 74241571 74243425 74242777 N NA RNF157,FAM100B MRPL38,SRP68,GALR2,ZACN,EXOC7,RNF157,FAM100B,QRICH2,PRPSAP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNF157 5181 1175 chr17 74353010 74354806 74353803 N NA QRICH2,PRPSAP1,SPHK1 PRPSAP1 MCF7 ChIA-PET 22265404 PRPSAP1 2780 1176 chr17 74843963 74846820 74844866 N NA NA MFSD11,SEC14L1,SRSF2,METTL23 IMR90 Hi-C 24141950 SRSF2 110470 1177 chr17 75065805 75070771 75067417 N NA SEC14L1 MGAT5B,MFSD11,SEPT9,SRSF2,METTL23,SEC14L1,JMJD6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SEC14L1 13954 1178 chr17 75763922 75768535 75767003 N NA NA TNRC6C,LOC100507351 IMR90 Hi-C 24141950 TNRC6C 231783 1179 chr17 75827242 75831484 75830775 Y TMC8,TMC6 NA TNRC6C,LOC100507351 IMR90 Hi-C 24141950 TNRC6C 168834 1180 chr17 76296015 76298674 76297497 N NA NA CYTH1,PGS1,DNAH17,TMEM235,C17orf99,TMC8,BIRC5,SOCS3,TNRC6C,LOC100131096 IMR90 Hi-C 24141950 SOCS3 57484 1181 chr17 76308673 76317096 76310518,76313749 Y,Y CYTH1,SOCS3,PGS1;CYTH1,SOCS3,PGS1 SOCS3 PGS1,DNAH17,CYTH1,TMEM235,BIRC5,SOCS3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS3 39062 1182 chr17 76587578 76590541 76588681 Y NA NA DNAH17,CYTH1,USP36 IMR90 Hi-C 24141950 CYTH1 187835 1183 chr17 79309484 79326080 79319912,79323913,79317053 Y,N,Y FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1;NA;NA SLC38A10,LINC00482,BAHCC1 ACTG1,SLC38A10,LINC00482,TMEM105,MIR4740,BAHCC1,C17orf70,FSCN2,C17orf56,C17orf89,MIR3186,NPLOC4 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 LINC00482 26436 1184 chr17 79337869 79341588 79339421 N NA BAHCC1 SLC38A10,NPLOC4 IMR90 Hi-C 24141950 BAHCC1 31952 1185 chr17 79923176 79929488 79925944 Y TSPAN10 SIRT7,MAFG,MAFG-AS1,PYCR1,NOTUM,ASPSCR1 ASPSCR1 K562,MCF7 ChIA-PET 22265404 NOTUM 4119 1186 chr17 8322957 8325984 8323899 N NA KRBA2,RPL26,NDEL1 CCDC42,RPL26,RNF222 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NDEL1 13195 1187 chr18 10588732 10590126 10589221 N NA NA PIEZO2 IMR90 Hi-C 24141950 NAPG 62859 1188 chr18 11945744 11950644 11947637 Y CHMP1B MPPE1,IMPA2 IMPA2,GNAL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IMPA2 30783 1189 chr18 1197750 1220531 1202427 N NA NA NA NA NA NA LINC00470 139099 1190 chr18 12903259 12905163 12904155 N NA PTPN2,SEH1L SLMO1,CEP76,PSMG2,PTPN2,SEH1L IMR90 Hi-C 24141950 PTPN2 18925 1191 chr18 1437274 1440204 1438915 N NA NA LINC00470 IMR90 Hi-C 24141950 LINC00470 77644 1192 chr18 1463807 1465926 1464552 N NA NA NA NA NA NA LINC00470 104177 1193 chr18 1508348 1517069 1509067,1515440,1512189 N,N,N NA;NA;NA NA NA NA NA NA LINC00470 148718 1194 chr18 19314519 19319460 19315695 N NA ABHD3,MIB1 NA NA NA NA MIB1 2085 1195 chr18 19689787 19691148 19690507 N NA NA MIB1 IMR90 Hi-C 24141950 MIB1 368242 1196 chr18 20030773 20042078 20032329 N NA NA GATA6,CTAGE1 IMR90 Hi-C 24141950 RBBP8 471217 1197 chr18 20045139 20049447 20047077 N NA NA GATA6,CTAGE1,RBBP8 IMR90 Hi-C 24141950 RBBP8 463848 1198 chr18 20138156 20141451 20139648 N NA NA CTAGE1,GATA6 IMR90 Hi-C 24141950 RBBP8 371844 1199 chr18 20246371 20249236 20247686 N NA NA GATA6 IMR90 Hi-C 24141950 RBBP8 264059 1200 chr18 2301327 2304815 2302927,2304073 N,N NA;NA NA NA NA NA NA METTL4 266674 1201 chr18 2324331 2327146 2325636 N NA NA ADCYAP1,METTL4 IMR90 Hi-C 24141950 METTL4 244343 1202 chr18 27751854 27756295 27755276 N NA NA NA NA NA NA DSC2 926093 1203 chr18 28255148 28257030 28256261 N NA NA NA NA NA NA DSC2 425358 1204 chr18 28259144 28262809 28259833 N NA NA NA NA NA NA DSC2 419579 1205 chr18 3036858 3040143 3038025 N NA LPIN2 LPIN2 K562 ChIA-PET 22265404 LPIN2 24913 1206 chr18 31048054 31050924 31049858 N NA NA ASXL3 IMR90 Hi-C 24141950 RNF138 1376236 1207 chr18 3331772 3334899 3333806 Y NA NA DLGAP1,TGIF1,MYL12B,FLJ35776 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MYL12B 69661 1208 chr18 3338592 3344050 3340621 N NA NA TGIF1,DLGAP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TGIF1 68022 1209 chr18 43354109 43357139 43355490 N NA NA SLC14A1,EPG5,SIGLEC15 IMR90 Hi-C 24141950 EPG5 190166 1210 chr18 43732438 43735645 43733179 Y RNF165,C18orf25 ATP5A1,HAUS1,C18orf25 NA NA NA NA C18orf25 18343 1211 chr18 43749114 43750152 43749631 N NA C18orf25 C18orf25 K562 ChIA-PET 22265404 C18orf25 3836 1212 chr18 46421418 46424210 46423288 Y SMAD7 NA CTIF,SMAD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD7 52871 1213 chr18 46499472 46503751 46502316 Y SMAD7 SMAD7 SMAD7,CTIF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SMAD7 22391 1214 chr18 47832480 47835184 47834290 Y CCDC11,MBD1,MBD1 CCDC11,MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 17788 1215 chr18 47950571 47952673 47951739 N NA SKA1 NA NA NA NA SKA1 49179 1216 chr18 48737449 48739171 48738134 Y ME2 MEX3C MEX3C K562 ChIA-PET 22265404 MEX3C 13398 1217 chr18 5084952 5090600 5085914 N NA NA NA NA NA NA LINC00526 147428 1218 chr18 517970 519973 519084 N NA NA COLEC12,CLUL1 IMR90 Hi-C 24141950 TYMS 137631 1219 chr18 53398056 53403286 53399386 N NA NA TCF4 IMR90 Hi-C 24141950 TXNL1 902634 1220 chr18 53560209 53595229 53560619 N NA NA TCF4,LOC100505474 IMR90 Hi-C 24141950 TXNL1 710691 1221 chr18 55486185 55488796 55487343 N NA NA ATP8B1,NEDD4L,LOC100505549,ALPK2 IMR90 Hi-C 24141950 NARS 197008 1222 chr18 55510409 55514629 55513682 Y NA NA ATP8B1,NEDD4L,ALPK2 IMR90 Hi-C 24141950 NEDD4L 196981 1223 chr18 55694107 55696948 55695177 N NA NEDD4L NEDD4L,ATP8B1,MIR3591,ALPK2 IMR90 Hi-C 24141950 NEDD4L 14662 1224 chr18 57548069 57551726 57549312 N NA PMAIP1 PMAIP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PMAIP1 15466 1225 chr18 57719526 57722254 57720994 N NA NA NA NA NA NA PMAIP1 152334 1226 chr18 60087006 60088774 60088219 Y KIAA1468,ZCCHC2 NA PHLPP1,ZCCHC2,TNFRSF11A,BCL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZCCHC2 101884 1227 chr18 63895946 63926216 63925520 N NA NA NA NA NA NA TMX3 2456137 1228 chr18 6682173 6731126 6683673,6729967 N,N NA;NA NA ARHGAP28,LOC100130480 IMR90 Hi-C 24141950 LOC400643 198742 1229 chr18 6740467 6782662 6741421 N NA NA ARHGAP28,LOC100130480 IMR90 Hi-C 24141950 LOC400643 147206 1230 chr18 68128333 68130091 68129002 N NA NA NA NA NA NA SOCS6 172196 1231 chr18 72139906 72148722 72147427 N NA CNDP2 FAM69C,CNDP1 IMR90 Hi-C 24141950 CNDP2 14778 1232 chr18 72155050 72157522 72156037 N NA CNDP2 FAM69C,CNDP1,CNDP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CNDP2 5978 1233 chr18 75673294 75707194 75705708,75704162,75702224 N,N,N NA;NA;NA NA NA NA NA NA ATP9B 1122203 1234 chr18 814819 835407 831374 N NA YES1 CLUL1,YES1,ENOSF1,THOC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YES1 2492 1235 chr18 838157 843321 839582,841958 N,N NA;NA YES1 CLUL1,YES1,THOC1,ENOSF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 YES1 25830 1236 chr18 8703382 8711175 8705136 N NA CCDC165 CCDC165,NDUFV2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC165 6194 1237 chr18 8880816 8884312 8883000 N NA NA CCDC165 IMR90 Hi-C 24141950 CCDC165 163447 1238 chr18 8890356 8894257 8893519,8891341 N,N NA;NA NA CCDC165 IMR90 Hi-C 24141950 CCDC165 172987 1239 chr18 8910762 8950115 8914817,8944018,8920906,8949048,8940353 N,N,N,Y,N NA;NA;NA;TWSG1;NA NA CCDC165 IMR90 Hi-C 24141950 NDUFV2 152513 1240 chr18 8992473 9005234 8994552,8998927,9001507 N,N,N NA;NA;NA NA CCDC165,RAB12,RALBP1,NDUFV2,ANKRD12 IMR90 Hi-C 24141950 NDUFV2 97394 1241 chr18 9007810 9012201 9009147 Y NA NA CCDC165,ANKRD12 IMR90 Hi-C 24141950 NDUFV2 90427 1242 chr18 9015371 9019571 9017375 Y ANKRD12 NA CCDC165,NDUFV2,ANKRD12,RALBP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NDUFV2 83057 1243 chr18 962362 968179 966297 N NA NA NA NA NA NA YES1 150035 1244 chr18 9681575 9686728 9684830 N NA RAB31 PPP4R1,VAPA,RAB31,TWSG1,TXNDC2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB31 21500 1245 chr18 9687760 9689405 9688450 N NA RAB31 PPP4R1,VAPA,RAB31,TXNDC2 IMR90 Hi-C 24141950 RAB31 18823 1246 chr18 976070 1191553 976991,1050191 N,N NA;NA NA COLEC12 T cell 3C 21310710 YES1 163743 1247 chr19 1193518 1195108 1194663 N NA SBNO2,STK11,C19orf26,ATP5D C19orf26,ATP5D,STK11,MIDN,SBNO2 MCF7,K562 ChIA-PET 22265404 STK11 10690 1248 chr19 13647068 13650096 13648547 N NA NA CACNA1A,CCDC130,MRI1 IMR90 Hi-C 24141950 CCDC130 208657 1249 chr19 13964630 13970888 13965654 N NA LOC284454,NANOS3,C19orf57,CC2D1A NA NA NA NA NANOS3 17175 1250 chr19 14331620 14333346 14332342 N NA LPHN1 NA NA NA NA LPHN1 14623 1251 chr19 14354951 14361024 14359979 N NA LPHN1 LOC100507373 IMR90 Hi-C 24141950 LPHN1 37954 1252 chr19 14472539 14476104 14474323 N NA CD97 CD97,DDX39A K562 ChIA-PET 22265404 CD97 15852 1253 chr19 14480376 14481706 14481009 Y ZNF333,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,DDX39A,CD97 CD97,DDX39A NA NA NA NA CD97 10250 1254 chr19 14484743 14487231 14486345 Y NA CD97,DDX39A DDX39A K562 ChIA-PET 22265404 CD97 4725 1255 chr19 1721814 1728549 1727606,1725825 N,Y NA;C19orf26,MUM1,APC2 NA TCF3,MEX3D,ATP8B3,C19orf25,ONECUT3,PLK5,UQCR11,LOC100288123,REXO1,ADAMTSL5 IMR90 Hi-C 24141950 TCF3 69486 1256 chr19 17822651 17824997 17823601 N NA MAP1S,FCHO1 UNC13A,FCHO1,INSL3,B3GNT3,JAK3 IMR90 Hi-C 24141950 MAP1S 5306 1257 chr19 18201243 18204927 18202167,18204464 Y,N FCHO1,FCHO1,JAK3,UBA52,LRRC25,IFI30,FKBP8,ELL,ARRDC2,ARRDC2,IL12RB1;NA MAST3 MAST3 K562 ChIA-PET 22265404 MAST3 3676 1258 chr19 1891276 1898907 1897781 N NA REXO1,KLF16,FAM108A1,SCAMP4,CSNK1G2 BTBD2,CSNK1G2,KLF16,SCAMP4,MKNK2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM108A1 5758 1259 chr19 2154112 2159400 2158479 N NA AP3D1,DOT1L PLEKHJ1,SF3A2,OAZ1,DOT1L MCF7,K562 ChIA-PET 22265404 AP3D1 2556 1260 chr19 21774282 21778162 21776370 N NA NA NA NA NA NA ZNF429 85845 1261 chr19 21782777 21788934 21786373 N NA NA NA NA NA NA ZNF429 94340 1262 chr19 21793481 21796224 21795208 N NA NA NA NA NA NA ZNF429 105044 1263 chr19 21799699 21801699 21800735 N NA NA NA NA NA NA ZNF429 111262 1264 chr19 21806438 21811287 21808242,21810017 N,N NA;NA NA NA NA NA NA ZNF429 118001 1265 chr19 21876041 21879354 21877547 N NA NA NA NA NA NA ZNF100 71076 1266 chr19 23257251 23292657 23258199 N NA NA NA NA NA NA ZNF91 285612 1267 chr19 23881157 23883379 23882145 N NA ZNF675 NA NA NA NA ZNF675 11140 1268 chr19 28986329 29038836 28994178,29011043,29013781,29019910,29024880,29033970,29026514,29030521,29035772,29036477 N,N,N,N,N,N,N,N,N,N NA;NA;NA;NA;NA;NA;NA;NA;NA;NA NA NA NA NA NA UQCRFS1 665300 1269 chr19 29041589 29045178 29044010 N NA NA NA NA NA NA UQCRFS1 658958 1270 chr19 29050766 29054163 29051915 N NA NA NA NA NA NA UQCRFS1 649973 1271 chr19 29091855 29096914 29093801 N NA NA NA NA NA NA UQCRFS1 607222 1272 chr19 29097609 29109892 29099229 N NA NA NA NA NA NA UQCRFS1 594244 1273 chr19 30344780 30346523 30345420 N NA CCNE1 NA NA NA NA CCNE1 41879 1274 chr19 3072095 3074626 3073416 N NA TLE2,AES,GNA11 AES,TLE2,GNA11,S1PR4,GNA15,NCLN,ZNF57,ZNF77,TLE6,CELF5 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AES 9131 1275 chr19 34624633 34627721 34625413 N NA LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 35631 1276 chr19 34655975 34657555 34656816 N NA LSM14A KCTD15 IMR90 Hi-C 24141950 LSM14A 5797 1277 chr19 35350310 35351949 35351200 N NA NA ZNF30 IMR90 Hi-C 24141950 ZNF30 65858 1278 chr19 35878642 35881135 35880047 N NA NA NA NA NA NA CD22 58570 1279 chr19 39536417 39537817 39536927 N NA FBXO27 FBXO27,SAMD4B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FBXO27 13219 1280 chr19 39747915 39750203 39749061 N NA NA PAPL,IL29,LRFN1 IMR90 Hi-C 24141950 LRFN1 55773 1281 chr19 40650937 40654523 40653746 N NA MAP3K10 TTC9B,CNTD2,MAP3K10,ZNF780A,AKT2,ZNF546,ZNF780B,SPTBN4 IMR90 Hi-C 24141950 MAP3K10 43128 1282 chr19 4130291 4132291 4131259 N NA MAP2K2 MAP2K2,EEF2,ZBTB7A,ANKRD24,CREB3L3,SIRT6 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MAP2K2 6165 1283 chr19 4142199 4146757 4145942 N NA MAP2K2,SIRT6 ZBTB7A,EEF2,SIRT6,CREB3L3,ANKRD24 IMR90 Hi-C 24141950 MAP2K2 18073 1284 chr19 42034865 42038835 42038018 Y CCDC97,TGFB1,B9D2,TMEM91,CEACAM4,CEACAM21,ARHGEF1 NA CEACAM21,LOC100505495 IMR90 Hi-C 24141950 C19orf69 85802 1285 chr19 44204413 44206946 44205657 N NA PLAUR SMG9,LYPD5,PLAUR,IRGC,KCNN4 IMR90 Hi-C 24141950 PLAUR 29915 1286 chr19 45094856 45096168 45096025 Y CLASRP,BCL3 NA CEACAM16,TOMM40,PVR,MIR4531,IGSF23 IMR90 Hi-C 24141950 PVR 50930 1287 chr19 45244099 45247082 45245258 N NA BCL3 BCL3 K562 ChIA-PET 22265404 BCL3 4896 1288 chr19 4572949 4578223 4576194 N NA LRG1,SEMA6B EBI3,CCDC94,ANKRD24,TNFAIP8L1,C19orf10 IMR90 Hi-C 24141950 SEMA6B 13178 1289 chr19 45957647 45960860 45959415 N NA CD3EAP,PPP1R13L,ERCC1,FOSB,RTN2,PPM1N,VASP FOSB,ERCC1,CD3EAP,PPP1R13L,RTN2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOSB 10393 1290 chr19 4596306 4599085 4598127 N NA SEMA6B,TNFAIP8L1 EBI3,CCDC94,ANKRD24,TNFAIP8L1,C19orf10 IMR90 Hi-C 24141950 SEMA6B 36535 1291 chr19 46690865 46710239 46696580,46705565,46708768 N,N,Y NA;NA;NA NA NOVA2,IGFL3,IGFL2,IGFL1,DKFZp434J0226 IMR90 Hi-C 24141950 PPP5C 140012 1292 chr19 47358327 47378758 47363925,47366426 Y,N PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35;NA AP2S1,ARHGAP35 AP2S1,SLC1A5,MIR3190,BBC3,ARHGAP35,ZC3H4,CCDC9,FKRP,STRN4,NPAS1,TMEM160,SAE1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AP2S1 4124 1293 chr19 479766 492612 489075,491627 N,N NA;NA SHC2,TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 TPGS1 14885 1294 chr19 48102105 48105469 48103743 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLTSCR1 5984 1295 chr19 48394088 48397201 48395436 Y NA NA NA NA NA NA SEPW1 112246 1296 chr19 51090874 51093572 51091998 N NA LRRC4B,SYT3 C19orf81 K562 ChIA-PET 22265404 LRRC4B 19572 1297 chr19 51251112 51252358 51251827 N NA CLEC11A CLEC11A K562 ChIA-PET 22265404 CLEC11A 24507 1298 chr19 51713283 51715133 51714316 N NA CD33 MYH14,KLK13,CTU1,SIGLECP3,C19orf75,IGLON5,SIGLEC10 IMR90 Hi-C 24141950 CD33 13202 1299 chr19 51718305 51721090 51719203 N NA CD33 KLK13,IGLON5,SIGLEC10 IMR90 Hi-C 24141950 CD33 7245 1300 chr19 51967676 51971053 51969340 N NA LOC100129083,CEACAM18,SIGLEC12 NA NA NA NA CEACAM18 8785 1301 chr19 52048772 52065046 52050646,52056232 N,N NA;NA SIGLEC12,ZNF175 SIGLEC5,ZNF175,CEACAM18,SIGLEC10,SIGLEC8,SIGLEC6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF175 9485 1302 chr19 5433208 5437461 5434652,5436809 N,N NA;NA NA KDM4B,PTPRS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPRS 92394 1303 chr19 54879757 54882030 54881203 N NA NA NA NA NA NA LENG8 78035 1304 chr19 55206416 55216630 55208459 N NA NA LILRB1 H1ESC 5C 22955621 LENG9 231522 1305 chr19 55978043 55980833 55978991 N NA ISOC2,ZNF628,NAT14,SSC5D ISOC2,UBE2S,SSC5D,NAT14 MCF7,K562 ChIA-PET 22265404 ISOC2 4994 1306 chr19 56060566 56062424 56061642 Y NA ZNF579,FIZ1,ZNF524 SGK110 K562 ChIA-PET 22265404 ZNF579 29787 1307 chr19 56787884 56834585 56815350,56826427,56833478 N,N,Y NA;NA;ZSCAN5A ZNF542 NA NA NA NA ZNF542 44883 1308 chr19 5803081 5804426 5804095 Y NA PRR22,DUS3L,NRTN NDUFA11,DUS3L,NRTN,LONP1,CATSPERD,RANBP3,LOC100128568,FUT6,VMAC,PRR22,FUT3,RFX2,FUT5,CAPS K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 DUS3L 11832 1309 chr19 6515014 6519212 6516678 N NA TNFSF9 TNFSF9 K562 ChIA-PET 22265404 TNFSF9 11798 1310 chr19 6598486 6605280 6600303,6603462,6598797 N,N,N NA;NA;NA CD70 EMR4P IMR90 Hi-C 24141950 CD70 7323 1311 chr19 7558765 7559876 7559565 Y NA PEX11G,ZNF358,MCOLN1,PNPLA6 NA NA NA NA PEX11G 4860 1312 chr19 8096809 8100359 8098500 N NA ELAVL1 NA NA NA NA ELAVL1 26280 1313 chr19 8223813 8227638 8226208 Y NA CERS4 FBN3,TIMM44 IMR90 Hi-C 24141950 CERS4 46579 1314 chr19 8763428 8770751 8766740,8764398 N,N NA;NA NA NA NA NA NA MYO1F 121097 1315 chr19 8779571 8784135 8781144 N NA NA NA NA NA NA MYO1F 137240 1316 chr2 101828943 101849681 101848928 N NA C2orf29 TBC1D8,RPL31,C2orf29 IMR90 Hi-C 24141950 C2orf29 19664 1317 chr2 102671160 102673916 102672593 N NA NA IL1R2,IL1R1,IL1RL2 IMR90 Hi-C 24141950 IL1R1 96486 1318 chr2 102679017 102714116 102680517,102682392,102686827,102699658,102691042 N,N,N,Y,N NA;NA;NA;IL1R1,MAP4K4,MAP4K4;NA NA IL1R1,IL1RL2,IL1R2,IL1RL1,IL18R1,MAP4K4 IMR90 Hi-C 24141950 IL1R1 56286 1319 chr2 10392950 10396580 10394678 N NA HPCAL1 HPCAL1,RRM2,C2orf48,MIR4261,NOL10 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HPCAL1 46460 1320 chr2 104066793 104088425 104079847,104085917 N,N NA;NA NA NA NA NA NA TMEM182 688303 1321 chr2 104143174 104148911 104144060 N NA NA NA NA NA NA TMEM182 764684 1322 chr2 106070614 106073101 106071805 N NA FHL2 C2orf49,FHL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FHL2 15384 1323 chr2 106083047 106086627 106084900 N NA FHL2 FHL2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FHL2 27817 1324 chr2 106093115 106094746 106093818 N NA FHL2 FHL2 IMR90 Hi-C 24141950 FHL2 37885 1325 chr2 106285111 106287543 106286195 N NA NA LOC285000,NCK2,UXS1 IMR90 Hi-C 24141950 NCK2 73977 1326 chr2 108292010 108366402 108363511,108364187,108360021 N,N,N NA;NA;NA NA NA NA NA NA GCC2 699175 1327 chr2 109647175 109649556 109648080 N NA NA MALL,EDAR IMR90 Hi-C 24141950 CCDC138 243956 1328 chr2 111447069 111450589 111449349 N NA BUB1 ACOXL IMR90 Hi-C 24141950 BUB1 11385 1329 chr2 111451579 111453664 111452757 N NA BUB1 ACOXL IMR90 Hi-C 24141950 BUB1 15895 1330 chr2 112418392 112422228 112420706 N NA NA BCL2L11,ACOXL IMR90 Hi-C 24141950 LOC541471 165700 1331 chr2 112455009 112457629 112456613 Y NA NA BCL2L11,ACOXL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANAPC1 184112 1332 chr2 113462174 113464825 113463972 N NA NA FLJ42351,SLC20A1,IL37,POLR1B,CHCHD5,CKAP2L,IL1B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CKAP2L 57429 1333 chr2 113469226 113472390 113470953 N NA CKAP2L FLJ42351,SLC20A1,IL37,CKAP2L,POLR1B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CKAP2L 49864 1334 chr2 114298035 114302367 114299162 N NA FOXD4L1,WASH2P NA NA NA NA WASH2P 38863 1335 chr2 114432729 114434381 114433667 N NA RABL2A ACTR3 IMR90 Hi-C 24141950 RABL2A 47912 1336 chr2 119065811 119070078 119067756 Y NA NA NA NA NA NA INSIG2 219761 1337 chr2 119478365 119481551 119479990 N NA NA NA NA NA NA STEAP3 499833 1338 chr2 119564129 119565781 119564755 N NA NA NA NA NA NA STEAP3 415603 1339 chr2 12002641 12005792 12003830 N NA NA LOC100506474,TRIB2 IMR90 Hi-C 24141950 LPIN1 115901 1340 chr2 12071583 12085931 12072413,12081719 N,N NA;NA NA TRIB2,LOC100506474 IMR90 Hi-C 24141950 LPIN1 184843 1341 chr2 120994799 120996346 120995207 N NA TMEM185B,RALB EPB41L5,RALB,TMEM185B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM185B 13815 1342 chr2 12107360 12110159 12108215 N NA NA TRIB2,LOC100506474,LPIN1 IMR90 Hi-C 24141950 LPIN1 220620 1343 chr2 12245401 12254289 12246611 N NA NA TRIB2,MIR4262,LOC100506474,LPIN1 IMR90 Hi-C 24141950 LPIN1 358661 1344 chr2 12315949 12319273 12318027 N NA NA TRIB2 IMR90 Hi-C 24141950 LPIN1 429209 1345 chr2 12414023 12662148 12416258,12417807,12419326,12422193,12426516,12428029,12466139,12571200,12455452,12591927,12633407,12654933 N,Y,N,N,N,N,Y,N,Y,N,N,N NA;TRIB2;NA;NA;NA;NA;TRIB2;NA;TRIB2;NA;NA;NA NA LOC100506474,LPIN1,TRIB2,MIR4262 IMR90 Hi-C 24141950 TRIB2 194850 1346 chr2 127033532 127085655 127065996 N NA NA NA NA NA NA GYPC 327856 1347 chr2 127390935 127407088 127402786,127406101 N,N NA;NA GYPC GYPC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GYPC 6423 1348 chr2 127407912 127409899 127408768 N NA GYPC GYPC K562 ChIA-PET 22265404 GYPC 3612 1349 chr2 127760251 127761670 127761112 N NA NA NA NA NA NA ERCC3 290082 1350 chr2 128111494 128149650 128145665 N NA MAP3K2 IWS1,ERCC3,MAP3K2,MIR4783,PROC,CYP27C1 IMR90 Hi-C 24141950 MAP3K2 10689 1351 chr2 12814528 12816299 12815663 N NA TRIB2 LPIN1 IMR90 Hi-C 24141950 TRIB2 40699 1352 chr2 129079241 129082745 129079780 N NA NA HS6ST1,UGGT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 UGGT1 230487 1353 chr2 129202977 129205194 129204164 N NA NA NA NA NA NA UGGT1 354223 1354 chr2 130981058 130994779 130986891 N NA MZT2B,SMPD4 NA NA NA NA SMPD4 40735 1355 chr2 131554286 131557654 131555442 N NA NA PLEKHB2,FAM168B K562,MCF7 ChIA-PET 22265404 FAM168B 293350 1356 chr2 131966331 131968265 131966887 N NA NA NA NA NA NA LOC440910 68598 1357 chr2 132151948 132153019 132152419 Y NA NA NA NA NA NA MZT2A 97045 1358 chr2 132418533 132451083 132426642,132419613,132439932 Y,N,N NA;NA;NA NA NA NA NA NA LOC150776 168147 1359 chr2 132723023 132724236 132723540 N NA NA NA NA NA NA LOC150776 472637 1360 chr2 133026105 133031368 133029778 N NA NA GPR39,CEP68,STAMBP,NRXN1,KCNIP3,ADCY3,EML4,DDX1,MIR4778,STARD7,TGOLN2,MAP3K2,RNU4ATAC,GCC2,CNNM3,LHCGR,LOC100189589,CLASP1,GMCL1,SULT6B1,ANKRD20A8P,MRPS9,NMS,RHOQ,CAPG,DGUOK,SMYD5,MPHOSPH10,ARID5A,HAAO,RMND5A,LOC440905,LIMS2,FOXN2,GPAT2,CIB4,LOC100216479,FEZ2,LOC729121,TTC7A,RTKN,CDKL4,POLR2D,LOC339803,EMILIN1,LYG1,MYCNOS,STEAP3,FAM49A,CKAP2L,EFR3B,OTOF,HK2,CNGA3,GEMIN6,ALK,SPR,LOC440895,IL18RAP,LOC375190,PTRHD1,C2orf81,MATN3,PEX13,FABP1,NPHP1,FAM161A,DDX18,ADRA2B,KRCC1,BIRC6,CCDC74B,C2orf49,THNSL2,ST3GAL5,NAT8B,ERCC3,CCDC88A,QPCT,LOC100506123,TLX2,REG1A,LOC284950,CHCHD5,SMC6,LOC254128,PNPT1,DBI,LOC100505716,LOC285103,TMSB10,RAD51AP2,MGAT4A,PLEKHH2,ELMOD3,PKDCC,GALM,GLI2,LIMS3-LOC440895,RPL31,ASXL2,LOC100132215,SMEK2,FBLN7,EPT1,SRSF7,DUSP2,CYP4F30P,LOC100131320,LOC388948,ATOH8,GCFC2,ACTR2,C2orf27B,IWS1,GPR17,MTIF2,LBX2,POU3F3,SUPT7L,SPDYA,TEKT4,ANKRD39,WDR54,RAB1A,IL36A,FAM123C,LOC285000,REV1,GPR148,MRPL33,EPB41L5,RPS27A,CEBPZ,EHBP1,RALB,APOB,DUSP11,LOC400958,CRIPT,CYP1B1-AS1,CHAC2,GFPT1,NPAS2,PTCD3,LOC389023,TRIM54,SFXN5,MALL,NT5C1B-RDH14,LOC100507334,POLE4,C2orf18,IL1A,C2orf73,CD8A,ATL2,LOC654342,UNC50,ITPRIPL1,HADHB,IL1R1,ZFP36L2,MAP4K3,FIGLA,LOC440900,ZNF512,POTEE,PDCL3,ABCG8,CCDC142,MYADML,MIR4783,PCBP1-AS1,PFN4,LOC150568,SEMA4F,TMEM177,LOC401010,MRPL19,GCKR,TTC32,GGCX,LOC151009,THUMPD2,LOC728537,IL36B,PCDP1,VAMP5,LRRTM4,SF3B14,SULT1C2,RGPD4,MCEE,AAK1,SFTPB,SLC5A7,SCTR,ACTR1B,CIAO1,DNAJC5G,SIX3,SERTAD2,PIGF,CD8B,GGT8P,SLC9A2,NFU1,SNAR-H,POTEKP,VWA3B,SH3RF3,FAHD2B,UBXN2A,LOC284998,MEIS1,FAM98A,LOC90784,LAPTM4A,CCDC104,LOC100499194,MAPRE3,PPP1R21,ANXA4,LOC440910,LOC100506421,FAM84A,GKN2,TMEM185B,RASGRP3,ABHD1,AFF3,CRIM1,MOGS,BOLA3,DNAJC27,MZT2B,MAL,NRBP1,UXS1,PRKD3,SOCS5,FLJ30838,TTC31,RNF103-CHMP3,HADHA,MIR4435-1,NOTO,RPL23AP7,C1QL2,CHMP3,RNF149,AUP1,TBC1D8,AGBL5,GYPC,MSH6,LOC728730,VPS54,EIF5B,GALNT14,PLEK,GEN1,LOC100505876,MIR4432,VAMP8,ST6GAL2,C2orf91,KIAA1841,MORN2,LOC100128590,IL1RL2,BMP10,EIF2B4,ARHGEF4,REG3A,SULT1C3,ADD2,TSN,IFT172,TSGA10,HNRPLL,DPY30,LGALSL,ZNF2,ZNF638,IMP4,CCDC138,INSIG2,ACOXL,FBXO41,DYSF,C2orf51,TMEM214,TMEM127,ALMS1P,CDC42EP3,MZT2A,TMEM150A,EGR4,FOXI3,C2orf16,FOSL2,OR7E91P,UGGT1,TMEM87B,TXNDC9,NBAS,CREG2,RGPD6,ABCG5,PUM2,RNF181,LINC00116,LOC646743,MIR4757,C2orf78,MRPL35,LOC541471,INHBB,RHOB,LOC388942,STON1-GTF2A1L,DCTN1,CCDC115,LOC100129726,KCNS3,UNQ6975,ZAP70,NAGK,C2orf53,MIR4436A,C2orf76,THADA,VRK2,SLC5A6,RABL2A,CCDC75,PLEKHB2,MXD1,ANKRD36BP2,REG1P,MIR217,C2orf63,ASTL,WDR33,NLRC4,XPO1,RETSAT,TUBA3E,TRIM43B,CAMKMT,BCL2L11,PUS10,PAIP2B,RPIA,SH2D6,PCBP1,USP39,REG3G,FSHR,MYCN,SEMA4C,ANKRD23,C1D,IL1R2,MKI67IP,MOB1A,LOC389043,ACTR3BP2,EPCAM,MAT2A,PCGF1,RGPD2,BIN1,KANSL3,LOC100287010,LOXL3,CD207,DPYSL5,VAX2,PPP1CB,POLR1A,LOC644838,BCL11A,SULT1C4,ANKRD36,DBIL5P2,B3GNT2,LINC00309,ARHGEF33,ANKRD30BL,TFCP2L1,C2orf89,IL1F10,OTX1,PPM1B,GKN1,ANTXR1,FKBP1B,ATP6V1B1,CCT7,CCDC74A,TEX261,MTA3,MFSD9,COX5B,RGPD1,FOXD4L1,FLJ42351,EFEMP1,SLC30A6,FAM168B,GDF7,NEURL3,TUBA3D,POLR1B,USP34,MSH2,MFSD2B,EXOC6B,RANBP2,LRRTM1,LOC100286979,C2orf84,KCNK12,MIR4267,CAD,FAM138B,SPRED2,HTRA2,ACTG2,AHSA2,SLC30A3,RBKS,NCK2,MIR548AD,FLJ16341,TRMT61B,SLC1A4,PROKR1,ATAD2B,LOC100630918,LCLAT1,CAPN14,LMAN2L,C2orf65,CTNNA2,SRD5A2,MIR4265,CCT4,INPP4A,SLC20A1,COX7A2L,SNRNP27,TMEM178,MIR4266,SULT1C2P1,MIR4436B1,MRPS5,IMMT,ALMS1,CYP27C1,HS6ST1,LOC728819,WTH3DI,CHST10,LOC375196,SMPD4,OSR1,PAPOLG,KRTCAP3,EPAS1,MDH1,C2orf74,IL18R1,LOC1720,CCDC164,LOC285074,VIT,PLGLB2,C2orf61,LONRF2,CCDC85A,UCN,C2orf28,DQX1,FAM178B,CENPA,MRPL30,MERTK,TCF23,DNAJC27-AS1,FAM176A,IL36G,IL1B,LIPT1,ZNF513,COA5,CLEC4F,PPP3R1,BRE,C2orf15,RAB6C,DOK1,PLGLA,GPR45,MIR4780,TMEM131,CBWD2,TSPYL6,LOC388946,CLIP4,C2orf42,SNRPG,LOC654433,LOC100505624,PTPN18,C2orf71,POMC,EML6,KIF3C,WASH2P,LOC150776,GTF3C2,WDR43,MEMO1,ETAA1,TRIM43,MRPL53,CAPN13,MIR4264,TIA1,SPTBN1,CENPO,C2orf55,FLJ12334,HS1BP3,COMMD1,IL1RN,LOC285033,ANKRD36B,LOC440894,PRADC1,C2orf68,TCF7L1,TMEM37,ATP6V1E2,SIX2,REG1B,CYP26B1,PREPL,WDR35,PAX8,OST4,CGREF1,PELI1,REL,POTEF,ZC3H8,KLHL29,DHX57,C2orf40,CNTNAP5,C2orf44,TGFBRAP1,PRKCE,LRPPRC,SLC35F5,FBXO48,GPR113,SUCLG1,LOC100288911,NCAPH,WDR92,TACR1,MARCO,MIR216A,CALM2,BUB1,ANKRD53,SLC4A1AP,DDX11L2,LOC100134259,FANCL,ACYP2,ITSN2,DNMT3A,PROM2,LYG2,LOC100287216,GPR75-ASB3,PCYOX1,MAP4K4,PNO1,LOC151534,YIPF4,PREB,ANAPC1,EMX1,REEP1,GPN1,PRORSD1P,ZNF514,WDPCP,KDM3A,NAT8,KCMF1,YPEL5,C2orf27A,LIMS1,EDAR,DYNC2LI1,LOC339807,SEPT10,FUNDC2P2,EHD3,SLC9A4,RAB10,FAM179A,HEATR5B,IL37,OXER1,SOWAHC,AFTPH,LOC389033,LOC729234,DNAH6,TET3,SMYD1,RGPD8,UGP2,LOC442028,STRN,CFC1B,LTBP1,FNDC4,MIR3682,MYO7B,ZC3H6,SNX17,TGFA,C2orf56,TPRKB,TMEM17,SAP130,FBXO11,AMMECR1L,RFX8,EIF2AK3,GNLY,PLB1,MSGN1,SLC3A1,TMEM182,C2orf29,LINC00486,FAM59B,PTPN4,CNNM4,RTN4,ACTR3,MITD1,LOC645949,IL1RL1,PPM1G,ASB3,INO80B-WBP1,CNRIP1,XDH,LBH,IL36RN,SLC8A1,PROC,LINC00152,KHK,EN1,NCOA1,FAM82A1,KCNK3,FAM136A,FER1L5,PSD4,SNORD89,SLC4A5,MPV17,SDC1,SPAST,VSNL1,ERLEC1,MIR216B,SRBD1,APLF,CCDC93,LOC84931,CCDC121,C2orf43,SFT2D3,DTNB,RGPD3,TTL,FHL2,LOC100133985,SOS1,TP53I3,RAB11FIP5,ARHGAP25,MTHFD2,BOLA3-AS1,KCNG3,EIF2AK2,DPP10,CYP1B1,C2orf70,TTC27,SNRNP200,PSME4,FAHD2A,MCFD2 IMR90 Hi-C 24141950 LOC150776 775719 1361 chr2 133086238 133111173 133095295,133090119,133097350,133104988,133110114 N,N,N,N,N NA;NA;NA;NA;NA NA NA NA NA NA LOC150776 835852 1362 chr2 134876070 134877233 134876258 N NA NA NA NA NA NA MGAT5 134597 1363 chr2 134918305 134966820 134918838 Y NA MGAT5 MGAT5,PRDM9,MIR3679 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 MGAT5 45010 1364 chr2 140166355 140188465 140168763 N NA NA NA NA NA NA SPOPL 907005 1365 chr2 143505365 143508335 143506355 N NA NA NA NA NA NA ZEB2 1769623 1366 chr2 145116191 145117856 145116786 Y NA NA ZEB2,ARHGAP15,GTDC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZEB2 160102 1367 chr2 145310053 145312324 145311145 N NA ZEB2 NA NA NA NA ZEB2 32095 1368 chr2 145337637 145342943 145340640,145341307,145338716 N,N,N NA;NA;NA NA ZEB2 K562 ChIA-PET 22265404 ZEB2 59679 1369 chr2 145352540 145355773 145353802 N NA NA ZEB2,DKFZp686O1327 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZEB2 74582 1370 chr2 145416896 145419654 145418053 Y GTDC1,ZEB2 NA ZEB2 K562 ChIA-PET 22265404 ZEB2 138938 1371 chr2 146449186 146453183 146451002 Y NA NA NA NA NA NA ZEB2 1171228 1372 chr2 146507097 146510969 146509604 Y NA NA DKFZp686O1327,ZEB2 IMR90 Hi-C 24141950 ZEB2 1229139 1373 chr2 151021664 151024379 151023715 N NA NA RND3 MCF7 ChIA-PET 22265404 MMADHC 577334 1374 chr2 152158666 152164766 152159708 N NA RBM43,NMI RBM43,NMI,TNFAIP6,RIF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NMI 12236 1375 chr2 156081521 156106749 156087789 N NA NA NA NA NA NA NR4A2 1082538 1376 chr2 156216135 156268691 156217099,156220627 N,N NA;NA NA NR4A2,GPD2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 NR4A2 920596 1377 chr2 156932351 156941397 156940356 N NA NA NA NA NA NA NR4A2 247890 1378 chr2 157192364 157218305 157198685 N NA NR4A2 GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NR4A2 3077 1379 chr2 157256640 157258226 157257441 N NA GPD2 NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GPD2 33739 1380 chr2 157286788 157288490 157287744 Y NR4A2,GPD2 GPD2 GPD2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 GPD2 3475 1381 chr2 158038272 158040085 158038994 N NA NA NR4A2,GALNT5,GPD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GALNT5 74255 1382 chr2 158076262 158080093 158078116 N NA GALNT5 GALNT5 K562 ChIA-PET 22265404 GALNT5 34247 1383 chr2 158309691 158310474 158309958 Y CYTIP NA NA NA NA NA GALNT5 195351 1384 chr2 158753669 158764204 158763680,158755965 N,N NA;NA ACVR1 ACVR1,PKP4 IMR90 Hi-C 24141950 ACVR1 21295 1385 chr2 158784929 158788427 158786670 N NA NA ACVR1 K562 ChIA-PET 22265404 ACVR1 52555 1386 chr2 162134643 162139311 162137245 N NA PSMD14 NA NA NA NA PSMD14 25475 1387 chr2 165850002 165851451 165850158 N NA NA COBLL1 IMR90 Hi-C 24141950 LOC100506124 877000 1388 chr2 170996930 171001574 170999407 N NA NA UBR3 IMR90 Hi-C 24141950 UBR3 312912 1389 chr2 171010248 171013808 171011770,171012761 N,N NA;NA NA UBR3 IMR90 Hi-C 24141950 UBR3 326230 1390 chr2 172099724 172104234 172101777 N NA TLK1 METTL8,TLK1,DCAF17 IMR90 Hi-C 24141950 TLK1 11900 1391 chr2 17302081 17306413 17304375,17305212 N,N NA;NA NA NA NA NA NA FAM49A 454947 1392 chr2 178028765 178034128 178033121,178029868 N,N NA;NA HNRNPA3 HOXD-AS2,LOC100130691,AGPS,PDE11A,NFE2L2,HNRNPA3,TTC30A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HNRNPA3 43294 1393 chr2 179055751 179075112 179059631 N NA NA RBM45,MIR548N IMR90 Hi-C 24141950 RBM45 78569 1394 chr2 179139733 179156867 179148625 N NA NA RBM45,MIR548N IMR90 Hi-C 24141950 MIR548N 89938 1395 chr2 181546497 181565785 181556680 N NA NA UBE2E3 IMR90 Hi-C 24141950 UBE2E3 279327 1396 chr2 182667030 182669936 182668909 N NA NA PPP1R1C IMR90 Hi-C 24141950 SSFA2 86536 1397 chr2 182674972 182677347 182675758 Y SSFA2 NA SSFA2 IMR90 Hi-C 24141950 SSFA2 79125 1398 chr2 185044789 185083174 185048746,185052048,185055209,185069130,185061987 N,N,N,N,N NA;NA;NA;NA;NA NA NA NA NA NA NUP35 1055706 1399 chr2 185325302 185329594 185326480 N NA NA NA NA NA NA NUP35 1336219 1400 chr2 186718973 186728787 186727892 N NA NA NA NA NA NA ZC3H15 622098 1401 chr2 187864886 187898031 187868067 N NA NA NA NA NA NA ITGAV 410096 1402 chr2 190067731 190069623 190068913 N NA NA GULP1,COL5A2 IMR90 Hi-C 24141950 WDR75 236536 1403 chr2 190369346 190371134 190370527 N NA NA SLC40A1 IMR90 Hi-C 24141950 WDR75 63187 1404 chr2 190477129 190480070 190478013 Y NA SLC40A1,ASNSD1 SLC40A1,WDR75,ASNSD1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC40A1 31592 1405 chr2 191442405 191451508 191444131 N NA TMEM194B TMEM194B,NAB1,INPP1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM194B 42937 1406 chr2 192428093 192432213 192430556 Y NA NA TMEFF2,OBFC2A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 OBFC2A 110585 1407 chr2 192435111 192437683 192436222 N NA NA TMEFF2,OBFC2A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 OBFC2A 105115 1408 chr2 192460260 192462859 192462028 N NA NA OBFC2A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 OBFC2A 79939 1409 chr2 192484362 192504415 192500558,192503160 Y,N NA;NA OBFC2A OBFC2A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 OBFC2A 38383 1410 chr2 194034847 194036293 194035426 N NA NA NA NA NA NA SDPR 1322841 1411 chr2 194139513 194142554 194141457 N NA NA NA NA NA NA SDPR 1427507 1412 chr2 194366954 194371439 194367435 N NA NA NA NA NA NA SDPR 1654948 1413 chr2 19492601 19506515 19505605 N NA NA NA NA NA NA TTC32 595229 1414 chr2 196232434 196233863 196233052 N NA NA SLC39A10 IMR90 Hi-C 24141950 SLC39A10 287669 1415 chr2 196336738 196339424 196338685 N NA NA SLC39A10 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC39A10 182108 1416 chr2 196376545 196378783 196378054 N NA NA SLC39A10 K562 ChIA-PET 22265404 SLC39A10 142749 1417 chr2 196399809 196402555 196401096 Y NA NA SLC39A10 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC39A10 118977 1418 chr2 196426231 196427692 196426907 Y NA NA SLC39A10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC39A10 93840 1419 chr2 196457868 196462199 196460597 N NA NA SLC39A10 MCF7,K562 ChIA-PET 22265404 SLC39A10 59333 1420 chr2 196510320 196511723 196511444 N NA SLC39A10 SLC39A10 IMR90 Hi-C 24141950 SLC39A10 9809 1421 chr2 19985589 19988919 19986407 Y TTC32 NA NA NA NA NA TTC32 112825 1422 chr2 200998492 201040962 201039561 N NA NA SPATS2L,AOX1,KCTD18,SGOL2 IMR90 Hi-C 24141950 SPATS2L 129642 1423 chr2 20290481 20293080 20291194 N NA LAPTM4A LAPTM4A,TTC32,WDR35,MATN3,PUM2,SDC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LAPTM4A 38692 1424 chr2 205216758 205219977 205217906 N NA NA NRP2,PARD3B IMR90 Hi-C 24141950 ABI2 1023755 1425 chr2 205271292 205274654 205272627 N NA NA PARD3B IMR90 Hi-C 24141950 ABI2 1078289 1426 chr2 205298611 205301466 205299631 N NA NA PARD3B IMR90 Hi-C 24141950 ABI2 1105608 1427 chr2 205315754 205319654 205317351,205318805 N,Y NA;NA NA PARD3B IMR90 Hi-C 24141950 ABI2 1122751 1428 chr2 20614685 20626206 20618886,20624773 N,Y NA;HS1BP3 RHOB HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOB 20629 1429 chr2 20627754 20630508 20629517 Y HS1BP3 RHOB HS1BP3,RHOB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOB 16327 1430 chr2 20636536 20639780 20638456 Y HS1BP3 RHOB HS1BP3,GDF7 IMR90 Hi-C 24141950 RHOB 7055 1431 chr2 20722695 20725962 20724959 N NA NA HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOB 75860 1432 chr2 20774222 20780559 20776668,20779218 N,Y NA;NA NA HS1BP3,RHOB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 70305 1433 chr2 20782568 20797538 20795607,20797375 N,N NA;NA NA HS1BP3,RHOB,PUM2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HS1BP3 53326 1434 chr2 208102653 208105612 208104154 N NA NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB1 289004 1435 chr2 208174222 208177432 208175103,208176322 Y,Y NA;CREB1,CCNYL1 NA KLF7,CREB1 IMR90 Hi-C 24141950 CREB1 217184 1436 chr2 208194569 208196958 208195817 Y NA NA KLF7,CREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB1 197658 1437 chr2 208197546 208204382 208199664,208202747 Y,Y KLF7;NA NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB1 190234 1438 chr2 208266604 208275308 208274277 N NA NA KLF7 IMR90 Hi-C 24141950 CREB1 119308 1439 chr2 208278404 208283464 208282251 N NA NA KLF7,MIR3130-1,FASTKD2,CREB1 IMR90 Hi-C 24141950 CREB1 111152 1440 chr2 208295794 208303312 208302767 N NA NA KLF7 IMR90 Hi-C 24141950 CREB1 91304 1441 chr2 208326008 208329755 208328921 N NA NA KLF7 IMR90 Hi-C 24141950 CREB1 64861 1442 chr2 208656395 208658681 208657062 Y FZD5 FZD5 PLEKHM3,CCNYL1,FZD5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FZD5 22252 1443 chr2 209422875 209501524 209436571,209480566,209428921 N,N,N NA;NA;NA NA NA NA NA NA PIKFYVE 291884 1444 chr2 209792725 209795795 209794340 N NA NA NA NA NA NA PIKFYVE 661734 1445 chr2 216141606 216144045 216142939 N NA ATIC LOC100130451,SPAG16,MREG IMR90 Hi-C 24141950 ATIC 32634 1446 chr2 216155045 216157105 216156037 N NA ATIC ATIC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATIC 19574 1447 chr2 216157876 216166231 216164477,216158966 Y,N NA;NA ATIC ATIC,ABCA12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATIC 10448 1448 chr2 216368600 216371146 216369975 N NA NA LOC646324 IMR90 Hi-C 24141950 FN1 67809 1449 chr2 217482392 217485372 217484377 N NA NA DIRC3,IGFBP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL37A 118872 1450 chr2 217638908 217641813 217639711 N NA NA DIRC3,TNS1,IGFBP5,TNP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL37A 275388 1451 chr2 217656113 217658808 217657391 N NA NA DIRC3,IGFBP5,TNP1,TNS1 IMR90 Hi-C 24141950 RPL37A 292593 1452 chr2 217743058 217747237 217745221 N NA NA DIRC3,IGFBP5,TNP1 IMR90 Hi-C 24141950 RPL37A 379538 1453 chr2 217938772 217940940 217940135 N NA NA DIRC3,IGFBP5,TNP1 IMR90 Hi-C 24141950 RPL37A 575252 1454 chr2 217956775 217959558 217957724 N NA NA IGFBP5,DIRC3,IGFBP2,TNP1 IMR90 Hi-C 24141950 RPL37A 593255 1455 chr2 217963920 217975284 217973562,217970608 N,Y NA;NA NA IGFBP5,DIRC3,IGFBP2,TNP1 IMR90 Hi-C 24141950 RPL37A 600400 1456 chr2 218018369 218022364 218019187 N NA NA DIRC3,IGFBP5,TNP1 IMR90 Hi-C 24141950 RPL37A 654849 1457 chr2 218026184 218029892 218027468 Y NA NA DIRC3,IGFBP5,TNP1,IGFBP2 IMR90 Hi-C 24141950 RPL37A 662664 1458 chr2 220548906 220550562 220549892 N NA NA INHA,OBSL1,SLC4A3,STK11IP,EPHA4,DES,SPEG,GMPPA,ACCN4 IMR90,HELA,K562,GM12878,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 STK11IP 86310 1459 chr2 223669725 223672473 223670895 N NA NA ACSL3,MOGAT1 IMR90 Hi-C 24141950 ACSL3 53259 1460 chr2 223904619 223910345 223909012,223906345 N,N NA;NA NA MOGAT1,KCNE4 IMR90 Hi-C 24141950 ACSL3 178887 1461 chr2 224535670 224590312 224588858 N NA NA AP1S3,SCG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 WDFY1 219740 1462 chr2 226091811 226094991 226094176 N NA NA NYAP2 IMR90 Hi-C 24141950 CUL3 641701 1463 chr2 228314134 228316809 228316151 N NA AGFG1 AGFG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AGFG1 20079 1464 chr2 231515571 231526303 231524139,231521637 Y,N GPR55,SP110,SP140,SP140L,CAB39;NA NA CAB39,SP110,LOC151475 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CAB39 51254 1465 chr2 232506285 232508448 232507599 Y NA NA PDE6D IMR90 Hi-C 24141950 PTMA 64787 1466 chr2 232525357 232532890 232527133,232529705,232531184 Y,N,Y DIS3L2;NA;NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 40345 1467 chr2 232535552 232539519 232538044 Y NA PTMA COPS7B,PTMA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTMA 33716 1468 chr2 234492065 234495273 234492534 N NA USP40 UGT1A8,HJURP,SPP2,TRPM8 GM12878,H1ESC,HELA,K562 5C 22955621 USP40 17829 1469 chr2 236363809 236371290 236370018 N NA AGAP1 AGAP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AGAP1 31443 1470 chr2 236377097 236378590 236377796 N NA AGAP1 AGAP1 IMR90 Hi-C 24141950 AGAP1 24143 1471 chr2 238371775 238380167 238378409,238374261 N,N NA;NA COL6A3 LRRFIP1,MLPH,PRLH,COL6A3,RAB17,COPS8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 COL6A3 48925 1472 chr2 238849813 238854286 238850907 N NA UBE2F-SCLY ILKAP,LRRFIP1,RBM44,RAMP1,UBE2F-SCLY,ESPNL,KLHL30,HES6,LOC151174,PER2,LOC643387,RAB17 IMR90 Hi-C 24141950 UBE2F-SCLY 21301 1473 chr2 241188964 241194401 241190981 N NA NA GPC1,ANKMY1,PP14571 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYEOV2 113200 1474 chr2 241311045 241329094 241327216 N NA NA PP14571,GPC1,ANKMY1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKMY1 168311 1475 chr2 243177092 243179498 243178891 N NA NA NA NA NA NA LOC728323 146248 1476 chr2 24704786 24707069 24705690 Y ITSN2 NA CENPO,ADCY3,NCOA1,PTRHD1 IMR90 Hi-C 24141950 NCOA1 100277 1477 chr2 24711964 24746701 24714088 N NA NA CENPO,NCOA1,ADCY3,EFR3B,PTRHD1 IMR90 Hi-C 24141950 NCOA1 60645 1478 chr2 25431396 25433918 25432997 N NA DNMT3A NA NA NA NA DNMT3A 41266 1479 chr2 2614362 2619282 2617335 Y NA NA NA NA NA NA TSSC1 762371 1480 chr2 26219756 26222233 26220806 Y RAB10 KIF3C,RAB10 ASXL2,RAB10,FAM59B,KIF3C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIF3C 14313 1481 chr2 27957122 27959431 27958652 Y NA MRPL33 BRE,PLB1,RBKS,MRPL33,FOSL2,LOC100505716 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL33 35153 1482 chr2 28588779 28591358 28589734 Y FOSL2 FOSL2 BRE,RBKS,FOSL2,GPN1,CCDC121,SLC4A1AP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSL2 24421 1483 chr2 30413736 30417534 30415592 N NA YPEL5,LBH LCLAT1,LBH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LBH 36863 1484 chr2 30506045 30508415 30507383 N NA NA LBH,LCLAT1 IMR90 Hi-C 24141950 LBH 51648 1485 chr2 30644094 30646688 30645172 Y LBH LCLAT1 LBH,LCLAT1 IMR90 Hi-C 24141950 LCLAT1 23435 1486 chr2 32033294 32038955 32037411 N NA NA NA NA NA NA MEMO1 196743 1487 chr2 37787297 37808525 37790559 N NA NA CDC42EP3,QPCT IMR90 Hi-C 24141950 CDC42EP3 90801 1488 chr2 38148435 38154907 38152505 N NA NA CDC42EP3,PRKG2,CYP1B1-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 CDC42EP3 249109 1489 chr2 38647218 38649435 38647941 N NA ATL2 GALM,ATL2 IMR90 Hi-C 24141950 ATL2 42786 1490 chr2 38728893 38743363 38742752 N NA NA ATL2,SRSF7,HNRPLL,GALM IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HNRPLL 86815 1491 chr2 38839528 38841662 38840844 N NA HNRPLL GALM,HNRPLL,ATL2,SRSF7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HNRPLL 9350 1492 chr2 38869855 38873320 38871044 N NA HNRPLL,GALM GALM,HNRPLL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GALM 19732 1493 chr2 38877054 38882587 38879816,38881683 N,N NA;NA HNRPLL,GALM GALM,HNRPLL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GALM 10465 1494 chr2 39364452 39371021 39368668,39369412 N,N NA;NA SOS1 SOS1 MCF7 ChIA-PET 22265404 SOS1 16848 1495 chr2 39376423 39379603 39377867 N NA SOS1 CDKL4 IMR90 Hi-C 24141950 SOS1 28819 1496 chr2 42368150 42370076 42368985 Y EML4 EML4 EML4,LOC388942,C2orf91,COX7A2L IMR90 Hi-C 24141950 EML4 26414 1497 chr2 43033478 43038977 43037426 Y NA NA THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MTA3 237807 1498 chr2 43129564 43134874 43130672,43134163 N,N NA;NA NA ZFP36L2,LOC100129726,THADA IMR90 Hi-C 24141950 ZFP36L2 318871 1499 chr2 43143219 43158142 43144907,43148438,43154844,43156257 N,N,N,N NA;NA;NA;NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 295603 1500 chr2 43186555 43197157 43195293 Y NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 256588 1501 chr2 43215019 43217134 43216601 N NA NA ZFP36L2,LOC100129726,THADA IMR90 Hi-C 24141950 ZFP36L2 236611 1502 chr2 43267238 43271350 43268441 N NA NA ZFP36L2,LOC100129726,THADA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 182395 1503 chr2 43357730 43359377 43358358 Y NA NA THADA,LOC100129726,ZFP36L2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 94368 1504 chr2 43363400 43371067 43365176,43370307 N,N NA;NA NA THADA,LOC100129726,ZFP36L2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 82678 1505 chr2 43384736 43386782 43385851 N NA NA THADA,LOC100129726,ZFP36L2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 66963 1506 chr2 43395089 43425042 43396054,43399136,43406420,43401658,43420556 N,N,Y,Y,N NA;NA;OXER1;OXER1,THADA,THADA,ZFP36L2;NA ZFP36L2,LOC100129726 LOC100129726,ZFP36L2,THADA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 28703 1507 chr2 46451211 46485326 46452033,46483897 Y,Y NA;RHOQ EPAS1 PRKCE,EPAS1,PIGF IMR90 Hi-C 24141950 EPAS1 39215 1508 chr2 46500164 46501440 46500875 N NA EPAS1 PRKCE,EPAS1 IMR90 Hi-C 24141950 EPAS1 23101 1509 chr2 47425659 47427428 47426232 N NA CALM2 EPCAM,TTC7A,CALM2,MCFD2,C2orf61 IMR90 Hi-C 24141950 CALM2 21919 1510 chr2 47497692 47507474 47499550 N NA NA TTC7A,CALM2,C2orf61,MCFD2,SOCS5 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPCAM 88813 1511 chr2 47546041 47565130 47561658,47564272 N,N NA;NA EPCAM CALM2,TTC7A,SOCS5,MCFD2,MSH2,EPCAM,C2orf61,MSH6 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EPCAM 31157 1512 chr2 47571688 47573253 47572262 N NA EPCAM EPCAM,MSH2 IMR90 Hi-C 24141950 EPCAM 23034 1513 chr2 47580296 47582395 47581880 N NA EPCAM,MSH2 EPCAM IMR90 Hi-C 24141950 EPCAM 13892 1514 chr2 48337786 48341232 48338975 N NA NA FOXN2,FBXO11,PPP1R21,STON1-GTF2A1L,MSH6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXN2 200563 1515 chr2 48346618 48349691 48348195 Y NA NA FOXN2,FBXO11,MSH6,PPP1R21,STON1-GTF2A1L IMR90 Hi-C 24141950 FOXN2 192104 1516 chr2 48371018 48375231 48373225 N NA NA FOXN2,PPP1R21 IMR90 Hi-C 24141950 FOXN2 166564 1517 chr2 54248103 54322893 54304512,54256027,54249232 N,N,N NA;NA;NA NA PSME4,SPTBN1,EML6,ACYP2,RTN4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSME4 50126 1518 chr2 55312977 55369949 55339485,55347887,55343045,55336938,55327242,55324777,55333512,55356109,55367956,55368587 N,Y,N,N,Y,N,N,N,N,N NA;CCDC88A;NA;NA;RTN4;NA;NA;NA;NA;NA RTN4 C2orf63,EML6,RTN4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RTN4 35243 1519 chr2 55685278 55689426 55687169 N NA CCDC88A NA NA NA NA CCDC88A 38221 1520 chr2 56346011 56389885 56346801,56369848,56361277 N,N,N NA;NA;NA NA NA NA NA NA PNPT1 425000 1521 chr2 61847174 61848955 61847888 N NA NA XPO1,USP34 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 XPO1 81756 1522 chr2 61919254 61922611 61921892 Y NA NA NA NA NA NA XPO1 153836 1523 chr2 61982639 61994602 61991115 N NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCT4 121204 1524 chr2 62522756 62625084 62523984,62532065,62526545,62532095,62537154 N,Y,N,Y,Y NA;B3GNT2;NA;B3GNT2;NA NA COMMD1,B3GNT2,EHBP1 IMR90 Hi-C 24141950 B3GNT2 99494 1525 chr2 64454616 64456770 64455520 N NA NA PELI1 IMR90 Hi-C 24141950 PELI1 83011 1526 chr2 64478920 64482993 64480206 N NA NA NA NA NA NA PELI1 107315 1527 chr2 64976187 64978406 64977705 N NA NA SERTAD2,LOC339807,AFTPH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 95141 1528 chr2 64993775 64997225 64995048 Y SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2 NA SERTAD2,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 112729 1529 chr2 65057547 65059733 65058664 Y AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2 NA SERTAD2 IMR90 Hi-C 24141950 SLC1A4 155846 1530 chr2 65080470 65083827 65082045 Y AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2 NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 SLC1A4 131752 1531 chr2 65085199 65087996 65086776 N NA NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 SLC1A4 127583 1532 chr2 65397301 65432969 65432388 N NA RAB1A,ACTR2 RAB1A,LOC400958,CEP68,SLC1A4,ACTR2 IMR90 Hi-C 24141950 ACTR2 21860 1533 chr2 66025607 66049167 66046448 N NA NA NA NA NA NA SPRED2 365951 1534 chr2 68646305 68649362 68647666 N NA FBXO48,APLF NA NA NA NA FBXO48 45028 1535 chr2 68655753 68657488 68656704 N NA FBXO48,APLF WDR92,PNO1,PPP3R1,CNRIP1,PLEK IMR90 Hi-C 24141950 FBXO48 36902 1536 chr2 68905431 68940849 68906933 N NA ARHGAP25 PROKR1,APLF,ARHGAP25,BMP10,FBXO48,GKN2 IMR90 Hi-C 24141950 ARHGAP25 21064 1537 chr2 71968963 71971293 71970168 N NA NA NA NA NA NA ZNF638 410078 1538 chr2 71973608 71976253 71975508,71974085 N,N NA;NA NA NA NA NA NA ZNF638 414723 1539 chr2 72109373 72112786 72110948 N NA NA EXOC6B,DYSF IMR90 Hi-C 24141950 ZNF638 550488 1540 chr2 72125816 72129593 72126619 N NA NA DYSF,EXOC6B,CYP26B1 IMR90 Hi-C 24141950 ZNF638 566931 1541 chr2 73402086 73404079 73402987 Y SFXN5 SMYD5 EMX1,RAB11FIP5,SFXN5,NOTO,PRADC1,CCT7,SMYD5 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMYD5 37287 1542 chr2 737109 743803 740393 N NA NA TMEM18 MCF7 ChIA-PET 22265404 TMEM18 59670 1543 chr2 74222717 74229274 74223081 N NA TET3 STAMBP,MOB1A,DGUOK,ACTG2,TET3 IMR90 Hi-C 24141950 TET3 44176 1544 chr2 76099219 76206851 76100323 N NA NA NA NA NA NA GCFC2 161108 1545 chr2 78723359 78770357 78768766 N NA NA NA NA NA NA GCFC2 2785248 1546 chr2 78773419 78774605 78773963 N NA NA NA NA NA NA GCFC2 2835308 1547 chr2 81707398 81761837 81709061,81710595 N,N NA;NA NA NA NA NA NA SUCLG1 2924749 1548 chr2 84000636 84048354 84012240,84029954,84018500 N,N,N NA;NA;NA NA NA NA NA NA SUCLG1 638232 1549 chr2 85115358 85117021 85116098 Y C2orf89,TMSB10 TMSB10 TMSB10 MCF7 ChIA-PET 22265404 TMSB10 15742 1550 chr2 85124986 85126416 85125706 N NA TMSB10 DNAH6,TMSB10,C2orf89,KCMF1 IMR90 Hi-C 24141950 TMSB10 6347 1551 chr2 85168185 85174856 85173603 Y TMSB10 TMSB10,KCMF1 KCMF1,TMSB10 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KCMF1 23375 1552 chr2 85716924 85729582 85726923 N NA LOC100630918,MAT2A TMEM150A,USP39,SH2D6,CAPG,MAT2A,GGCX,RETSAT,ELMOD3,LOC100630918,VAMP5,VAMP8,TGOLN2,TCF7L1,RNF181,C2orf68 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100630918 36427 1553 chr2 86148084 86151849 86148968 N NA ST3GAL5 POLR1A,ST3GAL5,GNLY,ATOH8,LOC284950,LOC90784 IMR90 Hi-C 24141950 ST3GAL5 31927 1554 chr2 8665736 8667651 8666189 N NA NA LOC100506274,LINC00299,ID2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 154462 1555 chr2 8717930 8725323 8724044 N NA NA LOC100506274,ID2,LINC00299 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 96790 1556 chr2 87882315 87887675 87883212 N NA NA NA NA NA NA LINC00152 127341 1557 chr2 88664444 88666162 88665151 N NA NA NA NA NA NA EIF2AK3 260932 1558 chr2 88952580 88960412 88959232 Y NA EIF2AK3,RPIA EIF2AK3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EIF2AK3 25486 1559 chr2 9340563 9342144 9341498 N NA ASAP2 ASAP2 IMR90 Hi-C 24141950 ASAP2 4750 1560 chr2 95870522 95873986 95873231 N NA ZNF514,ZNF2 ZNF2 MCF7 ChIA-PET 22265404 ZNF2 39339 1561 chr2 96216153 96219245 96217128 N NA NA NA NA NA NA FAHD2A 147705 1562 chr2 96509607 96518710 96515875,96517635 N,N NA;NA NA NA NA NA NA LOC729234 157589 1563 chr2 96654618 96661140 96658016 N NA LOC729234 NA NA NA NA LOC729234 15159 1564 chr2 96822543 96825966 96823643,96825897 Y,N TMEM127,KIAA1310,ARID5A,ASTL,DUSP2;NA LOC285033,STARD7 ASTL,DUSP2,STARD7,LOC285033,ADRA2B,SNRNP200,TMEM127,CIAO1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC285033 48188 1565 chr2 96975650 96988248 96987359 N NA TMEM127,CIAO1,SNRNP200,NCAPH SNRNP200 MCF7,K562 ChIA-PET 22265404 SNRNP200 4343 1566 chr2 9825547 9827603 9826347 Y NA NA YWHAQ,ADAM17 IMR90 Hi-C 24141950 YWHAQ 54441 1567 chr2 9892987 9895645 9894003 N NA NA YWHAQ,ADAM17,ITGB1BP1,IAH1,RRM2,CPSF3,GRHL1,KLF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 87926 1568 chr2 9940820 9942429 9941745 N NA TAF1B YWHAQ,KLF11,CYS1,TAF1B,ADAM17,ODC1,RRM2,GRHL1,HPCAL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 41142 1569 chr20 1008717 1067415 1066412 N NA NA ANGPT4,RSPO4 IMR90 Hi-C 24141950 TMEM74B 97702 1570 chr20 17890030 17893317 17891834 N NA NA SNX5,BFSP1,DSTN,RRBP1,BANF2,C20orf72 IMR90 Hi-C 24141950 SNX5 56173 1571 chr20 21080862 21082357 21081239 N NA PLK1S1 PLK1S1,NKX2-2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PLK1S1 24267 1572 chr20 22409747 22413419 22410883 N NA LOC284788 NA NA NA NA LOC284788 8466 1573 chr20 22813374 22815245 22814774 N NA NA THBD,LOC200261 IMR90 Hi-C 24141950 FOXA2 247273 1574 chr20 22890052 22892286 22891090 N NA NA NA NA NA NA LOC200261 220987 1575 chr20 22901860 22915795 22909533,22902690 N,N NA;NA NA THBD MCF7 ChIA-PET 22265404 LOC200261 197478 1576 chr20 23115705 23120007 23117654 Y NA LOC200261 NA NA NA NA LOC200261 2432 1577 chr20 23122522 23138099 23123902,23128688,23136932 Y,N,Y NA;NA;THBD,CD93,GZF1 LOC200261 LOC200261,CD93,THBD IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC200261 9249 1578 chr20 23140339 23147984 23142474 Y CD93,NXT1,GZF1 LOC200261 NA NA NA NA LOC200261 27066 1579 chr20 23639540 23642656 23641307 N NA CST3 NA NA NA NA CST3 20966 1580 chr20 2504745 2507552 2505823 N NA ZNF343 TMC2 IMR90 Hi-C 24141950 ZNF343 14967 1581 chr20 25827692 25836417 25834701 N NA NA NA NA NA NA ZNF337 150223 1582 chr20 25838207 25845669 25838876,25840687,25844359 N,N,N NA;NA;NA NA NA NA NA NA ZNF337 160738 1583 chr20 25848243 25849487 25848786 N NA NA NA NA NA NA ZNF337 170774 1584 chr20 26115179 26118745 26116523 Y NA NA NA NA NA NA LOC284801 71124 1585 chr20 29517207 29526132 29524811,29518679 N,N NA;NA NA NA NA NA NA FRG1B 85747 1586 chr20 29592240 29593727 29592346 N NA FRG1B NA NA NA NA FRG1B 18152 1587 chr20 29604020 29608044 29607532 N NA FRG1B NA NA NA NA FRG1B 3835 1588 chr20 30220340 30222778 30221418 N NA ID1 HM13,ID1,MIR3193,BCL2L1,COX4I2,TPX2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ID1 27254 1589 chr20 31247268 31253940 31253361 N NA C20orf203 KIF3B,C20orf203,C20orf112,DNMT3B IMR90 Hi-C 24141950 C20orf203 7485 1590 chr20 31338627 31341791 31340793 N NA COMMD7,DNMT3B COMMD7,DNMT3B K562,MCF7 ChIA-PET 22265404 COMMD7 6813 1591 chr20 32802512 32804878 32804068 N NA NA ITCH,DYNLRB1,ASIP IMR90 Hi-C 24141950 EIF2S2 102427 1592 chr20 34641627 34643840 34642281 N NA LOC647979 NA NA NA NA LOC647979 2745 1593 chr20 34649985 34658232 34652709,34650771 Y,N NA;NA LOC647979 LOC647979,PHF20,SCAND1,C20orf152,EPB41L1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC647979 11103 1594 chr20 34679679 34683033 34681566 Y EPB41L1,DLGAP4,EPB41L1 LOC647979 LOC647979,PHF20,EPB41L1,C20orf4,C20orf152 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC647979 40797 1595 chr20 37300921 37315814 37302765 N NA NA ARHGAP40,ACTR5,SLC32A1,PPP1R16B IMR90 Hi-C 24141950 ACTR5 61283 1596 chr20 39618141 39621806 39620091 N NA TOP1 TOP1,PLCG1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 35656 1597 chr20 39630644 39634001 39632461 Y MAFB,TOP1 TOP1 PLCG1,TOP1,ZHX3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 23461 1598 chr20 39635822 39638352 39637141 N NA TOP1 TOP1,ZHX3,CHD6,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 19110 1599 chr20 39957994 39959494 39958372 Y NA ZHX3,LPIN3 PLCG1,ZHX3,LPIN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LPIN3 10066 1600 chr20 40295962 40299744 40298673 N NA CHD6 CHD6,EMILIN3,LPIN3 IMR90 Hi-C 24141950 CHD6 48829 1601 chr20 40318337 40326480 40321712,40325463 N,N NA;NA NA CHD6,EMILIN3,LPIN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CHD6 71204 1602 chr20 4044103 4046955 4045770 N NA RNF24 RNF24,PANK2,MAVS IMR90 Hi-C 24141950 RNF24 47887 1603 chr20 4048692 4057556 4053393,4055836 N,N NA;NA NA RNF24,PANK2,MAVS IMR90 Hi-C 24141950 RNF24 52476 1604 chr20 4060266 4086399 4063371,4072678 N,N NA;NA SMOX RNF24,PANK2,MAVS,MIR103B2,LOC728228,CDC25B,C20orf29,SMOX,ADRA1D IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMOX 43051 1605 chr20 4088501 4090570 4089467 N NA SMOX LOC728228,PANK2,MIR103B2,ADRA1D,SMOX IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMOX 38880 1606 chr20 4114153 4119235 4116440 Y PANK2,PANK2,SMOX SMOX ADRA1D,SMOX IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMOX 10215 1607 chr20 44609775 44614058 44612076 N NA PCIF1,ZNF335 ZNF335,NCOA5 K562,MCF7 ChIA-PET 22265404 ZNF335 8942 1608 chr20 4564721 4568200 4565934 N NA NA ADRA1D,SMOX,PRND,PRNP,LOC728228,PRNT IMR90 Hi-C 24141950 PRNP 98597 1609 chr20 45989707 46001348 45989752,45993999,45999932 Y,N,N SULF2;NA;NA LOC100131496,ZMYND8 ZMYND8,LOC100131496,NCOA3,EYA2,PARD6B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 4233 1610 chr20 46008916 46012595 46009186,46011591 N,N NA;NA ZMYND8 ZMYND8,EYA2,LOC100131496,PARD6B,NCOA3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 23442 1611 chr20 46013750 46027333 46025812,46021019 N,N NA;NA ZMYND8 ZMYND8,LOC100131496,PARD6B,NCOA3,SLC2A10,EYA2,SULF2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 28276 1612 chr20 46101590 46106441 46102540 N NA NCOA3 NCOA3,ZMYND8,EYA2 IMR90 Hi-C 24141950 NCOA3 24160 1613 chr20 46751551 46757996 46753210,46755227 N,N NA;NA NA NA NA NA NA NCOA3 620950 1614 chr20 47498887 47505215 47504436 N NA ARFGEF2 PREX1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARFGEF2 33060 1615 chr20 48377128 48384338 48381896 Y ZNFX1,B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8 B4GALT5,SLC9A8 B4GALT5,SLC9A8,KCNB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 44912 1616 chr20 48389986 48394799 48392525 N NA SLC9A8 B4GALT5,SLC9A8,KCNB1,SPATA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 34451 1617 chr20 48401825 48402918 48402490 Y B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8 SLC9A8 KCNB1,B4GALT5,SLC9A8,SPATA2 IMR90 Hi-C 24141950 SLC9A8 26332 1618 chr20 48628497 48629964 48629404 N NA SNAI1 NA NA NA NA SNAI1 28984 1619 chr20 48772968 48788145 48782753 N NA UBE2V1,TMEM189-UBE2V1,CEBPB TMEM189-UBE2V1,SNAI1,UBE2V1,FAM65C,MIR645,PTPN1,RNF114,CEBPB K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 TMEM189-UBE2V1 2633 1620 chr20 49002268 49004857 49003527 N NA NA LOC284751,CEBPB,PTPN1,PARD6B,FAM65C,MIR645 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 122034 1621 chr20 49056044 49059022 49057970 N NA NA LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 67869 1622 chr20 49080185 49101774 49094987,49084772,49100262 N,N,Y NA;NA;TMEM189,CEBPB,PTPN1 PTPN1 LOC284751,CEBPB,TMEM189-UBE2V1,MIR645,FAM65C,PTPN1,PARD6B,UBE2V1,BCAS4,SNAI1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 25117 1623 chr20 49114592 49117186 49116063 N NA PTPN1 PARD6B,TMEM189-UBE2V1,PTPN1,SNAI1,FAM65C,CEBPB,LOC284751,MIR645 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 9705 1624 chr20 49301626 49310022 49305856,49307934,49309191 N,N,N NA;NA;NA FAM65C,PARD6B PTPN1,PARD6B,FAM65C,BCAS4,EYA2,MIR645 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PARD6B 38059 1625 chr20 49326819 49328877 49327681 N NA PARD6B PARD6B,PTPN1,FAM65C,MIR645,BCAS4 IMR90 Hi-C 24141950 PARD6B 19204 1626 chr20 49340653 49343464 49342031 N NA PARD6B NCOA3 MCF7 ChIA-PET 22265404 PARD6B 4617 1627 chr20 49406644 49408559 49407357 Y MOCS3 NA ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3 MCF7,K562 ChIA-PET 22265404 PARD6B 58563 1628 chr20 49648658 49655354 49650624,49653425 N,N NA;NA KCNG1 KCNG1,NFATC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KCNG1 8983 1629 chr20 49837193 49839657 49838484 N NA NA KCNG1 IMR90 Hi-C 24141950 KCNG1 197518 1630 chr20 49952786 49957248 49955373 N NA NA KCNG1,ATP9A,NFATC2 IMR90 Hi-C 24141950 NFATC2 221920 1631 chr20 49980897 49983856 49982826 Y KCNG1 NA NA NA NA NA NFATC2 195312 1632 chr20 50825449 50833611 50827112 N NA ZFP64 BCAS1 IMR90 Hi-C 24141950 ZFP64 16925 1633 chr20 50906774 51161058 50907843 N NA NA TSHZ2,BCAS1,ZNF217,MAP3K5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 ZFP64 98250 1634 chr20 52204460 52230575 52209964,52222624,52225095,52228204,52230074 N,N,N,N,N NA;NA;NA;NA;NA ZNF217 SUMO1P1,BCAS1,ZNF217,CSRNP3,BMP7,SULF2,ZMYND8,CYP24A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323,22265404 ZNF217 4824 1635 chr20 52237275 52241623 52238323,52240181 Y,Y ZNF217;ZNF217 ZNF217 SUMO1P1,BMP7,ZNF217,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 37639 1636 chr20 52258150 52261095 52259884 N NA NA SUMO1P1,BCAS1 IMR90 Hi-C 24141950 ZNF217 58514 1637 chr20 52269653 52273024 52271799 N NA NA SUMO1P1,BCAS1,BMP7,ZNF217 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 70017 1638 chr20 52293469 52297057 52294762,52296631 Y,N NA;NA NA BCAS1,SUMO1P1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 93833 1639 chr20 52353094 52358501 52355286,52358265 N,N NA;NA NA ZNF217,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 133747 1640 chr20 52368236 52371877 52370353 N NA NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 120371 1641 chr20 52444662 52447569 52445759 N NA SUMO1P1 ZNF217,SUMO1P1,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 44679 1642 chr20 52530496 52533579 52532113 Y NA SUMO1P1 SUMO1P1,BMP7,ZNF217 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 38248 1643 chr20 53710634 53711852 53711281 N NA NA NA NA NA NA PFDN4 886132 1644 chr20 55650578 55652553 55651733 N NA NA TFAP2C MCF7 ChIA-PET 22265404 CTCFL 447601 1645 chr20 56025522 56028779 56026339 N NA NA MIR5095 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTCFL 71375 1646 chr20 56035069 56037237 56036266 N NA NA MIR5095,CTCFL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CTCFL 62917 1647 chr20 5614155 5616021 5614882 N NA GPCPD1 GPCPD1,C20orf196 IMR90 Hi-C 24141950 GPCPD1 22483 1648 chr20 5655310 5657454 5656316 N NA NA C20orf196,GPCPD1 IMR90 Hi-C 24141950 GPCPD1 63638 1649 chr20 5697718 5702023 5700698 N NA C20orf196 GPCPD1,C20orf196 IMR90 Hi-C 24141950 C20orf196 29020 1650 chr20 5716227 5719643 5717583 N NA C20orf196 NA NA NA NA C20orf196 11400 1651 chr20 5720884 5723341 5722006 N NA C20orf196 NA NA NA NA C20orf196 7702 1652 chr20 61058924 61064552 61062788,61060602 N,N NA;NA NA GATA5 K562 ChIA-PET 22265404 CABLES2 76585 1653 chr20 61076425 61084506 61077039 Y DPH3P1,OGFR,DIDO1 NA NA NA NA NA CABLES2 94086 1654 chr20 62447069 62455923 62453858 N NA TPD52L2 ABHD16B,TPD52L2,ZBTB46,MIR1914,UCKL1-AS1,ZNF512B,UCKL1,DNAJC5 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TPD52L2 40658 1655 chr20 62459232 62465085 62463221 N NA TPD52L2 PTK6,SLC2A4RG,ZBTB46,TPD52L2,DNAJC5,ABHD16B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPD52L2 31496 1656 chr20 62465617 62467354 62466612 Y OPRL1,ABHD16B TPD52L2 PTK6,SLC2A4RG,ZBTB46,TPD52L2,DNAJC5,ABHD16B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPD52L2 29227 1657 chr20 62473277 62480789 62478732 N NA TPD52L2,DNAJC5 SLC2A4RG,ZBTB46,LIME1,ZGPAT,TPD52L2,UCKL1,MIR1914 IMR90 Hi-C 24141950 TPD52L2 15792 1658 chr20 6302053 6304225 6302721 N NA NA NA NA NA NA CRLS1 315314 1659 chr20 664778 675491 666338 N NA SRXN1,SCRT2 SRXN1,CSNK2A1,C20orf54 IMR90 Hi-C 24141950 SCRT2 7955 1660 chr20 792239 793913 793014 N NA FAM110A NA NA NA NA FAM110A 20443 1661 chr20 809381 810969 809896 Y FAM110A,FAM110A FAM110A NA NA NA NA FAM110A 3387 1662 chr20 8095184 8098120 8095494 N NA NA NA NA NA NA TMX4 94791 1663 chr21 10204233 10204969 10204635 N NA NA NA NA NA NA TEKT4P2 235640 1664 chr21 10594664 10602833 10597565 N NA NA NA NA NA NA TPTE 388087 1665 chr21 11168948 11187147 11170569 N NA NA BAGE5,TPTE IMR90 Hi-C 24141950 BAGE5 70023 1666 chr21 15824733 15828670 15825769 N NA NA NA NA NA NA HSPA13 69224 1667 chr21 16042697 16052375 16046170,16049512 N,N NA;NA NA NA NA NA NA SAMSN1 86974 1668 chr21 16062460 16134956 16126335,16121045,16116971 N,N,N NA;NA;NA NA SAMSN1 K562 ChIA-PET 22265404 SAMSN1 106737 1669 chr21 19061141 19063234 19061846 N NA NA CHODL IMR90 Hi-C 24141950 BTG3 75873 1670 chr21 20117684 20133481 20132416 N NA NA NA NA NA NA C21orf91 925981 1671 chr21 20818598 20835978 20831538,20833915 N,N NA;NA NA NA NA NA NA NCAM2 1534655 1672 chr21 20838597 20863828 20863057 N NA NA NA NA NA NA NCAM2 1506805 1673 chr21 21271873 21275620 21272505 N NA NA NA NA NA NA NCAM2 1095013 1674 chr21 21608443 21632164 21630798 N NA NA NA NA NA NA NCAM2 738469 1675 chr21 23529293 23564488 23561877,23563075 N,N NA;NA NA NA NA NA NA NCAM2 1158660 1676 chr21 23580925 23585424 23582214 N NA NA NA NA NA NA NCAM2 1210292 1677 chr21 25256717 25330279 25259720,25294407,25263101,25265934 N,N,N,N NA;NA;NA;NA NA NA NA NA NA MRPL39 1649522 1678 chr21 30847748 30882725 30848602 N NA NA GRIK1,LINC00189,GRIK1-AS2 IMR90 Hi-C 24141950 BACH1 170188 1679 chr21 33916508 33919425 33918855 N NA NA URB1,C21orf119,C21orf63,TCP10L IMR90 Hi-C 24141950 C21orf59 65493 1680 chr21 34587162 34588858 34588034 Y NA IFNAR2,IL10RB IFNAR2,IL10RB,LOC100288432,TMEM50B,IFNGR2 IMR90,GM12878 Hi-C,5C 24141950,22955621 IFNAR2 13373 1681 chr21 35401624 35407518 35402482 Y GART,GART MRPS6 MRPS6,LOC100506334 IMR90 Hi-C 24141950 MRPS6 38305 1682 chr21 36472161 36480403 36472743,36475466,36478687 N,Y,N NA;NA;NA NA RUNX1,SETD4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RUNX1 50566 1683 chr21 36575251 36580648 36577916 N NA NA RUNX1,SETD4,CLIC6,LOC100506385,MIR802 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RUNX1 153656 1684 chr21 36846570 36849886 36848822 N NA NA RUNX1,LOC100506385,CLIC6 IMR90 Hi-C 24141950 RUNX1 424975 1685 chr21 36853945 36861332 36857926,36855811 N,N NA;NA NA RUNX1,LOC100506385,CLIC6,CBR1,LOC100133286,SETD4,LINC00160 IMR90 Hi-C 24141950 RUNX1 432350 1686 chr21 36899902 36901776 36901261 N NA NA RUNX1,LOC100506385 IMR90 Hi-C 24141950 RUNX1 478307 1687 chr21 36919792 36921317 36920522 N NA NA LOC100506385,RUNX1,CLIC6 IMR90 Hi-C 24141950 RUNX1 498197 1688 chr21 37335039 37337832 37336369 N NA NA CLIC6,LINC00160,KCNE1,LOC100506385,RUNX1 IMR90 Hi-C 24141950 SETD4 94987 1689 chr21 37377283 37384924 37377552 N NA SETD4 RCAN1,RUNX1,CLIC6,LINC00160,LOC100506385 IMR90 Hi-C 24141950 SETD4 47895 1690 chr21 38710430 38712340 38711469 N NA DYRK1A DYRK1A,DSCR3,TTC3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 27519 1691 chr21 38932288 38939128 38936316,38938243,38934737 Y,N,N TTC3,DYRK1A,DYRK1A;NA;NA NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 192429 1692 chr21 40170135 40171568 40170554 N NA ETS2 LINC00114,ETS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ETS2 5663 1693 chr21 40337592 40338693 40338170 Y NA NA ETS2,LINC00114,PSMG1 IMR90 Hi-C 24141950 ETS2 160361 1694 chr21 40736281 40743586 40742588 Y NA BRWD1-IT2,HMGN1,WRB BRWD1,BRWD1-IT2,WRB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WRB 8627 1695 chr21 41213240 41216119 41214884 N NA NA NA NA NA NA SH3BGR 395443 1696 chr21 43612271 43614884 43613281 Y C2CD2,ZNF295,UMODL1,ABCG1,ABCG1,ABCG1,ABCG1 NA ABCG1 K562 ChIA-PET 22265404 ZNF295 181775 1697 chr21 44572190 44579539 44573918 Y NA U2AF1 HSF2BP,LINC00319,LINC00313,SIK1,RRP1B,U2AF1,WDR4,NDUFV3,PDXK,CRYAA IMR90 Hi-C 24141950 U2AF1 44502 1698 chr21 44913817 44915620 44914799 Y PDXK,U2AF1,SIK1 NA CRYAA,SIK1,HSF2BP,RRP1B,LINC00313 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SIK1 66815 1699 chr21 45273698 45277677 45274538 N NA AGPAT3 AGPAT3,PDXK,LOC284837,TRAPPC10 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AGPAT3 7439 1700 chr21 46738187 46739735 46738890 Y COL18A1 POFUT2,LOC642852 COL18A1 MCF7 ChIA-PET 22265404 LOC642852 30220 1701 chr21 46779214 46781491 46780386 N NA COL18A1 ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1 IMR90 Hi-C 24141950 COL18A1 43606 1702 chr21 46782799 46786141 46784133 Y NA COL18A1 ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 COL18A1 38956 1703 chr21 46974123 46979099 46975645 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3,COL18A1,LINC00315,LOC642852 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 11738 1704 chr21 47005323 47033641 47010639,47013357 Y,N NA;NA SLC19A1 PCBP3,LOC100129027,SLC19A1,COL18A1,POFUT2,COL18A1-AS1,ADARB1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 42938 1705 chr21 9666989 9678252 9676784 N NA NA NA NA NA NA TEKT4P2 290341 1706 chr21 9681890 9688242 9684035 N NA NA NA NA NA NA TEKT4P2 280351 1707 chr21 9695045 9706125 9695905,9704309,9698015 N,N,N NA;NA;NA NA NA NA NA NA TEKT4P2 262468 1708 chr21 9727320 9728914 9728101 N NA NA NA NA NA NA TEKT4P2 239679 1709 chr21 9871515 9883827 9882002 Y NA NA NA NA NA NA TEKT4P2 84766 1710 chr22 17848121 17850781 17849867 Y NA NA CECR2 IMR90 Hi-C 24141950 CECR5 201944 1711 chr22 19607284 19616466 19615296 N NA NA CDC45,UFD1L,MRPL40,HIRA,CLDN5,CLTCL1,SLC25A1,C22orf39,LOC150185,DGCR2,DGCR14,TSSK2,TXNRD2,GSC2,GP1BB,SEPT5 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SEPT5 85521 1712 chr22 19627441 19630783 19629090 N NA NA CDC45,UFD1L,CLTCL1,SLC25A1,HIRA,TXNRD2,DGCR14,GSC2,MRPL40,GP1BB,SEPT5,DGCR2,C22orf39,CLDN5 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SEPT5 71204 1713 chr22 19678512 19680262 19679450 N NA SEPT5,GP1BB UFD1L,TXNRD2,CLDN5,SEPT5,HIRA,GP1BB,TBX1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SEPT5 21725 1714 chr22 22344905 22348707 22347297 N NA PPM1F,TOP3B NA NA NA NA TOP3B 7758 1715 chr22 22384661 22386061 22385214 N NA TOP3B NA NA NA NA TOP3B 47514 1716 chr22 22522569 22524432 22523079 N NA NA VPREB1,LOC96610 IMR90 Hi-C 24141950 LOC96610 128031 1717 chr22 23270321 23272271 23271624 Y NA NA MIR650 IMR90 Hi-C 24141950 BCR 250281 1718 chr22 23772821 23783277 23773836,23775684 N,N NA;NA ZDHHC8P1 NA NA NA NA ZDHHC8P1 28022 1719 chr22 23802400 23808271 23802960 N NA NA ZDHHC8P1,IGLL1 IMR90 Hi-C 24141950 ZDHHC8P1 57601 1720 chr22 23861973 23867088 23863461 Y NA NA ZDHHC8P1 IMR90 Hi-C 24141950 ZDHHC8P1 117174 1721 chr22 23873597 23882406 23875914,23880494,23881898 N,N,N NA;NA;NA NA ZDHHC8P1,BCR,CES5AP1,IGLL1,GUSBP11,RGL4 IMR90 Hi-C 24141950 ZDHHC8P1 128798 1722 chr22 26800093 26802010 26801049 N NA NA NA NA NA NA HPS4 77810 1723 chr22 28060233 28068496 28066374 Y PITPNB,MN1 NA MN1,TTC28,TTC28-AS1,MIAT IMR90 Hi-C 24141950 PITPNB 246759 1724 chr22 28118188 28124026 28122851 Y PITPNB,MN1 NA NA NA NA NA PITPNB 191229 1725 chr22 29246773 29254666 29248156 N NA ZNRF3 TTC28,TTC28-AS1,ZNRF3 IMR90 Hi-C 24141950 ZNRF3 25089 1726 chr22 30600737 30606730 30601979,30604966,30606401 Y,Y,N MTMR3,SLC35E4,SF3A1,DUSP18,CCDC157,OSM,LIF;NA;NA NA HORMAD2,LIF,GATSL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GATSL3 78886 1727 chr22 35591565 35606149 35605538 N NA HMGXB4 LARGE IMR90 Hi-C 24141950 HMGXB4 47296 1728 chr22 35843174 35869942 35844063 N NA MCM5 RASD2,MB,TOM1,RBFOX2 IMR90 Hi-C 24141950 MCM5 47058 1729 chr22 35873067 35889067 35887611,35877435,35874050 N,N,N NA;NA;NA NA TOM1,RASD2,MB,RBFOX2,MCM5,APOL6,HMOX1 IMR90 Hi-C 24141950 MCM5 76951 1730 chr22 36022392 36024208 36023636 N NA APOL6 MB MCF7 ChIA-PET 22265404 APOL6 20216 1731 chr22 36458727 36463330 36462135 N NA RBFOX2 RBFOX2,APOL5,APOL3,APOL6,MCM5,MB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBFOX2 34142 1732 chr22 36821271 36824834 36822480 N NA MYH9 MYH9,FOXRED2,TXN2 IMR90 Hi-C 24141950 MYH9 37208 1733 chr22 37997195 37998545 37997786 Y GGA1,GGA1 CDC42EP1,GGA1,SH3BP1 CYTH4,LGALS2,CDC42EP1,CARD10,MFNG,SH3BP1,PDXP,GGA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GGA1 5936 1734 chr22 38424499 38432075 38430515 N NA PICK1 SOX10,POLR2F,PICK1,MAFF,EIF3L,SLC16A8,BAIAP2L2,MICALL1,C22orf23,PLA2G6,CSNK1E,TMEM184B,DMC1,DDX17,CBY1,LOC646851 IMR90 Hi-C 24141950 PICK1 21187 1735 chr22 39677912 39680754 39679699 Y NA RPL3 CBX7,PDGFB,SNORD83A,SNORD83B,RNU86,RPL3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RPL3 34916 1736 chr22 41046540 41054682 41048008 N NA MKL1 ST13,MKL1,MCHR1,ADSL,SLC25A17,DNAJB7,XPNPEP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 13850 1737 chr22 41106893 41109013 41107723 N NA NA MKL1,MCHR1,SLC25A17,ST13,XPNPEP3,DNAJB7 IMR90 Hi-C 24141950 MKL1 74203 1738 chr22 41410148 41419830 41418383 N NA NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBX1 62797 1739 chr22 42738910 42742497 42739813 N NA NA TCF20,LOC388906,NFAM1,CYP2D6,LOC100132273,C22orf32,NDUFA6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC388906 73151 1740 chr22 42833266 42834688 42834049 N NA NA WBP2NL,TCF20,LOC388906,SERHL,MEI1 IMR90 Hi-C 24141950 SERHL 61897 1741 chr22 42838468 42843572 42840789 Y SEPT3 NA MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3,FAM109B,NAGA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SERHL 53013 1742 chr22 42931941 42936967 42935524,42933533,42935538 N,N,N NA;NA;NA SERHL,RRP7A,SERHL2,RRP7B NA NA NA NA SERHL2 12958 1743 chr22 43499568 43500808 43500172 Y NA MCAT,TSPO MCAT,BIK,ARFGAP3,PACSIN2,TTLL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MCAT 38595 1744 chr22 46968147 47001934 46972925,46974919,47000063 N,N,N NA;NA;NA GRAMD4 TRMU,GRAMD4,CELSR1 IMR90 Hi-C 24141950 GRAMD4 20724 1745 chr22 47149004 47151786 47150296 Y NA CERK,TBC1D22A CERK MCF7 ChIA-PET 22265404 TBC1D22A 6732 1746 chr3 100859849 100862981 100861240 N NA NA ABI3BP IMR90 Hi-C 24141950 SENP7 369104 1747 chr3 100866253 100867426 100867075 N NA NA ABI3BP IMR90 Hi-C 24141950 SENP7 364659 1748 chr3 101655204 101657007 101655755 N NA NA NA NA NA NA NFKBIZ 86846 1749 chr3 105600849 105604039 105601686 N NA CBLB NA NA NA NA CBLB 12962 1750 chr3 106202205 106206244 106205656 N NA NA CBLB IMR90 Hi-C 24141950 CBLB 614318 1751 chr3 107147662 107153025 107150575 N NA NA LOC344595,BBX,LOC100302640 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BBX 88758 1752 chr3 107821737 107825257 107822707 N NA CD47 IFT57,MYH15,CD47 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD47 11802 1753 chr3 107842547 107857977 107844086 N NA CD47 CD47,IFT57,MYH15 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD47 32612 1754 chr3 109525106 109527375 109525966 Y NA NA PVRL3 IMR90 Hi-C 24141950 KIAA1524 1216615 1755 chr3 110222988 110284528 110224306 N NA NA PVRL3-AS1,PVRL3 IMR90 Hi-C 24141950 ABHD10 1413300 1756 chr3 112463974 112467486 112465625 Y CCDC80,CD200R1 NA GTPBP8,CD200R1,SLC35A5,CD200R1L,CCDC80,C3orf17 IMR90 Hi-C 24141950 SLC35A5 183079 1757 chr3 120275705 120279568 120278676 N NA NDUFB4 FSTL1,GPR156,LRRC58,NR1I2,NDUFB4,GTF2E1 IMR90 Hi-C 24141950 NDUFB4 35560 1758 chr3 125978473 125981101 125979947 N NA NA ALDH1L1,KLF15,ZXDC,CCDC37 IMR90 Hi-C 24141950 KLF15 95135 1759 chr3 127728093 127736502 127729761 N NA SEC61A1 SEC61A1,PODXL2,KBTBD12 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SEC61A1 34710 1760 chr3 127857881 127865283 127864353 N NA RUVBL1,EEFSEC SEC61A1,RUVBL1,EEFSEC,LOC90246,GATA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EEFSEC 7030 1761 chr3 128249857 128258010 128251872 N NA GATA2,LOC90246 RUVBL1,EEFSEC,LOC90246,C3orf27 IMR90 Hi-C 24141950 LOC90246 23179 1762 chr3 128930173 128931656 128930887 N NA CNBP,COPG1 KIAA1257,CCDC48,ISY1-RAB43,CNBP,COPG1,GP9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CNBP 27363 1763 chr3 12908672 12911561 12910324 N NA RPL32 CAND2,IQSEC1,RPL32 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL32 25591 1764 chr3 129897177 129908714 129900968 N NA NA NA NA NA NA FAM86HP 66901 1765 chr3 132629883 132632154 132631158 N NA NA NPHP3-AS1,TF IMR90 Hi-C 24141950 NPHP3-ACAD11 188580 1766 chr3 13470539 13473452 13472851 N NA NUP210,HDAC11 NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NUP210 8730 1767 chr3 13489268 13495090 13493398 Y NA NUP210,HDAC11 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HDAC11 26625 1768 chr3 135231904 135234535 135232863 N NA NA EPHB1 IMR90 Hi-C 24141950 MSL2 680153 1769 chr3 138544576 138555660 138551780,138553820 N,N NA;NA NA PIK3CB IMR90 Hi-C 24141950 PIK3CB 66375 1770 chr3 138579961 138585597 138582216,138580726 Y,N NA;NA NA PIK3CB IMR90 Hi-C 24141950 FOXL2 80385 1771 chr3 138592685 138597438 138594878,138595664 Y,N NA;NA NA NA NA NA NA FOXL2 68544 1772 chr3 138616280 138636388 138631205,138634763 N,N NA;NA FOXL2,C3orf72 PIK3CB,CEP70,ESYT3,FAIM,MRPS22,MRAS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXL2 29594 1773 chr3 139004685 139009006 139007532 N NA NA BPESC1,PISRT1,MRPS22 IMR90 Hi-C 24141950 MRPS22 53855 1774 chr3 139015207 139021391 139018504 Y FOXL2,C3orf72 MRPS22 BPESC1,FOXL2,MRPS22,COPB2 IMR90 Hi-C 24141950 MRPS22 41470 1775 chr3 139023839 139033363 139031952 N NA MRPS22 BPESC1,FOXL2,C3orf72,MRPS22,COPB2 IMR90 Hi-C 24141950 MRPS22 29498 1776 chr3 13930979 13934028 13932410 Y NA NA C3orf19,WNT7A,TMEM43,CHCHD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CHCHD4 232343 1777 chr3 13935535 13951608 13937286 N NA NA C3orf19,TMEM43,CHCHD4,XPC,LSM3,SLC6A6,WNT7A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CHCHD4 214763 1778 chr3 141378465 141380141 141379144 N NA NA ATP1B3,RASA2 IMR90 Hi-C 24141950 RNF7 76910 1779 chr3 141566701 141571866 141568301 N NA ATP1B3 RASA2,GRK7,ATP1B3 IMR90 Hi-C 24141950 ATP1B3 23604 1780 chr3 142695243 142696776 142695596 N NA U2SURP PCOLCE2,ATR,LOC100289361,U2SURP,PAQR9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 U2SURP 23596 1781 chr3 14270436 14280076 14273299,14274340 N,N NA;NA NA SLC6A6,LSM3,XPC,CHCHD4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LSM3 50208 1782 chr3 142802000 142804609 142803977 N NA CHST2 CHST2 K562 ChIA-PET 22265404 CHST2 34009 1783 chr3 14281861 14299657 14284757,14293548,14298152,14290540 N,N,N,N NA;NA;NA;NA NA SLC6A6,GRIP2,LSM3,XPC IMR90 Hi-C 24141950 LSM3 61633 1784 chr3 142894829 142904026 142902370,142897001 N,N NA;NA NA CHST2,SLC9A9 IMR90 Hi-C 24141950 CHST2 56211 1785 chr3 14360239 14363505 14361288 N NA NA SLC6A6 IMR90 Hi-C 24141950 SLC6A6 80601 1786 chr3 14390590 14394934 14393745 N NA SLC6A6 SLC6A6,LSM3,XPC,GRIP2 IMR90 Hi-C 24141950 SLC6A6 49172 1787 chr3 14412103 14415135 14413508 Y C3orf19,SLC6A6 SLC6A6 SLC6A6,LSM3,XPC,GRIP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC6A6 28971 1788 chr3 150082668 150083518 150083159 N NA TSC22D2 RNF13,PFN2,TSC22D2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 43270 1789 chr3 150087216 150092038 150088893 N NA TSC22D2 TSC22D2,LOC646903,RNF13,PFN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 34750 1790 chr3 150092810 150094184 150092966 N NA TSC22D2 TSC22D2,LOC646903,RNF13,PFN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 32604 1791 chr3 150099961 150103896 150102742 Y SIAH2,SERP1,TSC22D2 TSC22D2 PFN2,RNF13,TSC22D2,SERP1,EIF2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 22892 1792 chr3 151909519 151928243 151911823,151923319,151915968,151922334,151918407 N,Y,N,Y,N NA;MBNL1;NA;AADACL2;NA NA MBNL1,LOC401093 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MBNL1 57586 1793 chr3 152313225 152315890 152314083 Y NA NA NA NA NA NA P2RY1 236846 1794 chr3 152373616 152375294 152374338 N NA NA NA NA NA NA P2RY1 177442 1795 chr3 152692795 152696100 152694368 N NA NA NA NA NA NA P2RY1 140059 1796 chr3 152740227 152741684 152740985 N NA NA C3orf79 IMR90 Hi-C 24141950 RAP2B 138345 1797 chr3 152767885 152771165 152769715 N NA NA RAP2B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAP2B 108864 1798 chr3 152789907 152791536 152790460 N NA NA NA NA NA NA RAP2B 88493 1799 chr3 152938357 152953889 152939823,152945838 N,N NA;NA NA RAP2B IMR90 Hi-C 24141950 RAP2B 58328 1800 chr3 153002610 153003512 153003366 N NA NA RAP2B IMR90 Hi-C 24141950 RAP2B 122581 1801 chr3 153006392 153008670 153007340 Y P2RY1,RAP2B NA RAP2B IMR90 Hi-C 24141950 RAP2B 126363 1802 chr3 154743462 154745976 154745169 N NA NA NA NA NA NA DHX36 701176 1803 chr3 154754626 154757623 154755823 N NA NA MME IMR90 Hi-C 24141950 DHX36 712340 1804 chr3 155051820 155054985 155052993 N NA NA NA NA NA NA C3orf33 469070 1805 chr3 156322620 156325322 156323814 N NA SSR3 TIPARP-AS1,TIPARP,CCNL1,SSR3,LOC339894,LOC100498859 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SSR3 49647 1806 chr3 156361188 156362325 156361859 Y TIPARP,TIPARP,TIPARP,LEKR1,LEKR1 TIPARP,TIPARP-AS1 TIPARP,TIPARP-AS1,LEKR1,LOC100498859,LOC339894 IMR90 Hi-C 24141950 TIPARP 29880 1807 chr3 156888419 156908533 156888964,156892855 N,N NA;NA LOC339894,CCNL1 VEPH1,CCNL1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 9937 1808 chr3 163132723 163136045 163135789 N NA NA NA NA NA NA NMD3 2193624 1809 chr3 163215274 163238773 163217460,163219446 N,N NA;NA NA NA NA NA NA NMD3 2276175 1810 chr3 163268059 163273003 163270440 N NA NA NA NA NA NA NMD3 2328960 1811 chr3 165610179 165667814 165635817,165639118 N,N NA;NA NA NA NA NA NA PDCD10 1784837 1812 chr3 16577158 16579121 16577779 N NA NA OXNAD1,RFTN1,DPH3 IMR90 Hi-C 24141950 OXNAD1 270491 1813 chr3 165974695 165977792 165976159 N NA NA NA NA NA NA PDCD10 1474859 1814 chr3 167833112 167836074 167836015,167834211 N,N NA;NA GOLIM4 GOLIM4 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 GOLIM4 19695 1815 chr3 170358332 170360563 170359470 N NA NA CLDN11,SLC7A14 IMR90 Hi-C 24141950 RPL22L1 227482 1816 chr3 170397029 170402196 170398573 N NA NA SLC7A14,CLDN11 IMR90 Hi-C 24141950 RPL22L1 185849 1817 chr3 170414702 170418914 170417590 N NA NA SLC7A14,CLDN11 IMR90 Hi-C 24141950 RPL22L1 169131 1818 chr3 170419877 170422238 170420993 Y CLDN11 NA SLC7A14,CLDN11,PRKCI,SKIL IMR90 Hi-C 24141950 RPL22L1 165807 1819 chr3 170434348 170436542 170435821 N NA NA CLDN11,SLC7A14,RPL22L1 IMR90 Hi-C 24141950 RPL22L1 151503 1820 chr3 170442300 170449446 170444527,170448100 Y,N CLDN11,CLDN11,RPL22L1,EIF5A2;NA NA CLDN11,SLC7A14,SKIL,PRKCI IMR90 Hi-C 24141950 RPL22L1 138599 1821 chr3 170481692 170487453 170484971 N NA NA SLC7A14,CLDN11 IMR90 Hi-C 24141950 RPL22L1 100592 1822 chr3 170494011 170498172 170496598,170495774 N,N NA;NA NA SLC7A14,CLDN11,SKIL IMR90 Hi-C 24141950 RPL22L1 89873 1823 chr3 170528021 170531127 170529974 N NA NA SLC7A14,CLDN11,SKIL,PRKCI,RPL22L1 IMR90 Hi-C 24141950 RPL22L1 56918 1824 chr3 170538523 170542012 170540236 N NA RPL22L1 SLC7A14,CLDN11,PRKCI,SKIL IMR90 Hi-C 24141950 RPL22L1 46033 1825 chr3 171186967 171190884 171188712 N NA TNIK SLC2A2,TNIK,PLD1 IMR90 Hi-C 24141950 TNIK 8770 1826 chr3 171227652 171230498 171229690 N NA TNIK TNIK,SLC2A2 IMR90 Hi-C 24141950 TNIK 49455 1827 chr3 171240431 171244247 171242087 N NA NA TNIK,SLC2A2,EIF5A2,PLD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNIK 62234 1828 chr3 171675767 171690246 171678956,171678179,171685175,171688531 N,N,Y,N NA;NA;PLD1,FNDC3B;NA NA PLD1,FNDC3B,TMEM212,TNIK IMR90 Hi-C 24141950 FNDC3B 67172 1829 chr3 171691176 171697762 171693414,171695883 Y,N FNDC3B;NA NA PLD1,FNDC3B,TMEM212 IMR90 Hi-C 24141950 FNDC3B 59656 1830 chr3 174157668 174176705 174159023 N NA NA NAALADL2 IMR90 Hi-C 24141950 ECT2 1685370 1831 chr3 176078280 176081885 176080351 N NA NA NA NA NA NA TBL1XR1 833163 1832 chr3 176377527 176380411 176379204 N NA NA NA NA NA NA TBL1XR1 534637 1833 chr3 177001590 177004029 177002408 N NA NA TBL1XR1 K562 ChIA-PET 22265404 TBL1XR1 86542 1834 chr3 177017191 177019544 177018128 Y NA NA NA NA NA NA TBL1XR1 102143 1835 chr3 177052661 177058839 177056880 N NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 137613 1836 chr3 177060666 177065368 177063065 N NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 145618 1837 chr3 177073741 177079497 177075736,177077822,177079069 N,Y,N NA;NA;NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 158693 1838 chr3 177765564 177769409 177766732 N NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 850516 1839 chr3 177977567 177980343 177979387 N NA NA NA NA NA NA ZMAT3 809313 1840 chr3 179018811 179021310 179019921 N NA KCNMB3,ZNF639,MFN1 ZMAT3,KCNMB3 IMR90 Hi-C 24141950 ZNF639 20241 1841 chr3 17902393 17939822 17902714 N NA NA NA NA NA NA TBC1D5 118153 1842 chr3 180587147 180589074 180588112 N NA FXR1 NA NA NA NA FXR1 41160 1843 chr3 182080492 182084126 182082643 N NA NA NA NA NA NA ATP11B 427165 1844 chr3 182133717 182144543 182144107 N NA NA NA NA NA NA ATP11B 366748 1845 chr3 182432942 182434877 182434181 N NA NA SOX2-OT IMR90 Hi-C 24141950 ATP11B 76414 1846 chr3 182457065 182459005 182458435 N NA NA ATP11B MCF7 ChIA-PET 22265404 ATP11B 52286 1847 chr3 184464633 184467032 184466087 N NA MAGEF1 EPHB3,MAGEF1,CHRD,THPO,CLCN2,POLR2H IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAGEF1 34797 1848 chr3 186417336 186419476 186418279 N NA NA KNG1 IMR90 Hi-C 24141950 EIF4A2 81885 1849 chr3 186537316 186549416 186544330 N NA EIF4A2,RFC4 EIF4A2,RFC4,FETUB,ST6GAL1,DNAJB11,TBCCD1,ADIPOQ,HRG,RPL39L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RFC4 12832 1850 chr3 186617496 186628628 186619238,186627456 N,N NA;NA ST6GAL1 ST6GAL1,KNG1 IMR90 Hi-C 24141950 ST6GAL1 19687 1851 chr3 187128516 187130250 187130010 N NA NA NA NA NA NA RPL39L 271253 1852 chr3 187585456 187608442 187607981 N NA NA BCL6,LPP,LPP-AS2 IMR90 Hi-C 24141950 BCL6 121943 1853 chr3 189312798 189339114 189314567 N NA NA TP63 IMR90 Hi-C 24141950 CCDC50 1707760 1854 chr3 191376021 191388153 191377267 N NA NA NA NA NA NA CCDC50 329147 1855 chr3 193462094 193464768 193463355 N NA NA LOC100131551 IMR90 Hi-C 24141950 OPA1 151161 1856 chr3 193509963 193517388 193512245,193514132 N,N NA;NA NA LOC100131551,HES1,LOC647323 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OPA1 199030 1857 chr3 193541516 193554307 193553168 N NA NA LOC100131551,LOC647323,HES1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OPA1 230583 1858 chr3 193555648 193563490 193560795 N NA NA HES1,LOC100131551 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 OPA1 244715 1859 chr3 193569576 193573158 193571464 N NA NA LOC647323,LOC100131551,HES1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OPA1 258643 1860 chr3 193575136 193578139 193576834 N NA NA LOC100131551 IMR90 Hi-C 24141950 OPA1 264203 1861 chr3 193599189 193605041 193603977 N NA NA HES1,OPA1,LOC647323 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HES1 248890 1862 chr3 193613326 193616728 193615516 N NA NA LOC647323 IMR90 Hi-C 24141950 HES1 237203 1863 chr3 193625958 193632181 193629790,193626515 N,N NA;NA NA LOC647323,LOC100131551,HES1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HES1 221750 1864 chr3 193638593 193650758 193646886 N NA NA LOC100131551,LRRC15,HES1,LOC647323 IMR90,Breast,K562 Hi-C,3C,ChIA-PET 24141950,19956766,22265404 HES1 203173 1865 chr3 193786118 193791359 193788813 N NA NA LOC647323,HES1,LOC100131551 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HES1 62572 1866 chr3 193796561 193798134 193797749 N NA NA HES1,LOC647323,LOC100131551 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HES1 55797 1867 chr3 193799767 193803333 193801638 N NA NA HES1,LOC647323,LOC100131551 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HES1 50598 1868 chr3 193805309 193809672 193807549 Y ATP13A3,HES1 HES1 HES1,LOC647323,LOC100131551 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HES1 44259 1869 chr3 193883747 193885436 193884760 N NA HES1 HES1,LOC100131551 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 HES1 29816 1870 chr3 193910839 193913004 193912315 N NA NA LOC100131551,LOC647323,OPA1 IMR90 Hi-C 24141950 HES1 56908 1871 chr3 193971610 193975335 193973422 N NA NA LOC647323,LOC100131551,HES1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HES1 117679 1872 chr3 194275027 194278187 194277499 Y NA NA ATP13A3,TMEM44,FLJ34208,LRRC15,CPN2,GP5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FLJ34208 67158 1873 chr3 194280842 194283491 194282339 Y NA NA ATP13A3,TMEM44,LRRC15,CPN2,GP5,FLJ34208,XXYLT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM44 70659 1874 chr3 194561195 194563771 194561710 N NA NA LOC100507391,XXYLT1,ACAP2,FAM43A,PPP1R2 IMR90 Hi-C 24141950 LSG1 167989 1875 chr3 195178661 195180698 195179137 N NA ACAP2 LSG1,ACAP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ACAP2 14844 1876 chr3 195748268 195750695 195749619 N NA SDHAP1 SDHAP2,MUC20,MIR570,TFRC,LOC401109,ZDHHC19,OSTalpha IMR90 Hi-C 24141950 SDHAP1 31118 1877 chr3 195832699 195859680 195835382,195850258,195837457,195843649,195854205 N,Y,N,N,Y NA;TFRC,TFRC;NA;NA;TFRC,TFRC TFRC,LOC401109 TFRC,LOC401109,PCYT1A,LRRC33,TRIM37,RNF168,C3orf43,MIR570,MUC20,SDHAP2,UBXN7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 LOC401109 9827 1878 chr3 196253050 196257220 196255809 Y NA RNF168,WDR53,FBXO45 UBXN7,MUC20,TFRC,LOC401109,OSTalpha,ZDHHC19,PCYT1A,TCTEX1D2,TM4SF19-TCTEX1D2,RNF168,C3orf43,WDR53,CEP19,PAK2,FBXO45 IMR90 Hi-C 24141950 RNF168 22411 1879 chr3 196338235 196340572 196339091 Y LRRC33 WDR53,FBXO45,LRRC33 PCYT1A,TCTEX1D2,FBXO45,WDR53,CEP19,PIGX,LRRC33,PAK2,MFI2,MFI2-AS1,SENP5,UBXN7 IMR90 Hi-C 24141950 LRRC33 26084 1880 chr3 197182605 197184832 197183572 N NA NA BDH1,DLG1,LOC100507086 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLG1 157158 1881 chr3 197833923 197839460 197835025 N NA ANKRD18DP ANKRD18DP,LMLN IMR90 Hi-C 24141950 ANKRD18DP 26381 1882 chr3 20064802 20066068 20065465 N NA KAT2B KAT2B K562 ChIA-PET 22265404 KAT2B 15456 1883 chr3 20362713 20364721 20363410 N NA NA NA NA NA NA SGOL1 134989 1884 chr3 20365427 20368387 20366861 N NA NA NA NA NA NA SGOL1 137703 1885 chr3 20930805 21015566 20931770,20946884 Y,N NA;NA NA NA NA NA NA SGOL1 703081 1886 chr3 27512846 27527030 27526010 N NA NA SLC4A7,NEK10 IMR90 Hi-C 24141950 CMC1 756094 1887 chr3 31154583 31158826 31156116 N NA NA GADL1 IMR90 Hi-C 24141950 STT3B 415665 1888 chr3 31492739 31495887 31494375 N NA NA NA NA NA NA STT3B 78604 1889 chr3 31513342 31515905 31514451 N NA NA GADL1 IMR90 Hi-C 24141950 STT3B 58586 1890 chr3 31527323 31529638 31528434 N NA STT3B GADL1,STT3B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STT3B 44853 1891 chr3 32089584 32092034 32090634 N NA NA GPD1L IMR90 Hi-C 24141950 GPD1L 55969 1892 chr3 32132555 32134562 32133475 N NA GPD1L NA NA NA NA GPD1L 13441 1893 chr3 33940749 33945637 33943199 N NA NA ARPP21 IMR90 Hi-C 24141950 PDCD6IP 100686 1894 chr3 33946169 33948944 33946562 N NA NA NA NA NA NA PDCD6IP 106106 1895 chr3 33952474 33954303 33953519 N NA NA NA NA NA NA PDCD6IP 112411 1896 chr3 33955415 33958054 33956494 N NA NA NA NA NA NA PDCD6IP 115352 1897 chr3 33976601 34073130 33977925,33980728 Y,N NA;NA NA NA NA NA NA PDCD6IP 136538 1898 chr3 36996117 37001186 37000058,36996480 N,N NA;NA TRANK1,EPM2AIP1,MLH1 EPM2AIP1,MLH1 K562 ChIA-PET 22265404 TRANK1 9569 1899 chr3 37270047 37272540 37271346 N NA GOLGA4 LRRFIP2,GOLGA4,MLH1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 GOLGA4 12142 1900 chr3 39325457 39327827 39326215 N NA NA TTC21A K562 ChIA-PET 22265404 SLC25A38 96988 1901 chr3 41158190 41160595 41159035 Y NA NA ULK4 IMR90 Hi-C 24141950 CTNNB1 80347 1902 chr3 42034705 42069564 42054778,42067176 N,Y NA;ULK4 NA TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 63182 1903 chr3 4300955 4304967 4301073 N NA SETMAR NA NA NA NA SETMAR 40021 1904 chr3 43810113 43816090 43811760,43814970 N,N NA;NA NA ANO10,ABHD5,MIR138-1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ABHD5 77738 1905 chr3 44275766 44279745 44278026 N NA NA C3orf77 K562 ChIA-PET 22265404 C3orf23 100199 1906 chr3 45284029 45316747 45311714,45314642 N,N NA;NA TMEM158 LARS2,SACM1L,TMEM158,SLC6A20,CLEC3B,EXOSC7,LIMD1,LOC644714,CDCP1 IMR90 Hi-C 24141950 TMEM158 16215 1907 chr3 47826808 47831208 47830379 N NA SMARCC1,DHX30 SMARCC1 K562 ChIA-PET 22265404 SMARCC1 3403 1908 chr3 49480800 49482973 49481555 N NA RHOA,TCTA,NICN1,DAG1 NICN1,RHOA,TCTA IMR90 Hi-C 24141950 NICN1 14043 1909 chr3 49502625 49504102 49503136 N NA NICN1,DAG1 NA NA NA NA DAG1 2034 1910 chr3 5016271 5018777 5017475 N NA BHLHE40 ITPR1,EGOT,LOC100507582 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BHLHE40 2320 1911 chr3 5051355 5064715 5054309,5061348,5059867 N,Y,Y NA;EDEM1,ARL8B,BHLHE40;ARL8B,BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 30258 1912 chr3 5079252 5081461 5080153 N NA NA ITPR1,EGOT IMR90 Hi-C 24141950 BHLHE40 58155 1913 chr3 5122719 5126009 5123997 N NA ARL8B ITPR1 IMR90 Hi-C 24141950 ARL8B 37921 1914 chr3 5149607 5152351 5150516 N NA ARL8B NA NA NA NA ARL8B 11579 1915 chr3 51773628 51778344 51776750 N NA NA GRM2,IQCF6 IMR90 Hi-C 24141950 TEX264 68406 1916 chr3 5371297 5374221 5372739 N NA NA NA NA NA NA EDEM1 141938 1917 chr3 5468413 5472540 5470740 Y NA NA NA NA NA NA EDEM1 239054 1918 chr3 5476784 5486044 5479749,5484136 N,N NA;NA NA NA NA NA NA EDEM1 247425 1919 chr3 5537434 5548471 5539073 N NA NA NA NA NA NA EDEM1 308075 1920 chr3 5606225 5617698 5606949 N NA NA NA NA NA NA EDEM1 376866 1921 chr3 57943956 57946963 57945309 N NA FLNB FLNB,ARF4 IMR90 Hi-C 24141950 FLNB 47164 1922 chr3 57959341 57962115 57960718 Y FLNB FLNB ARF4,FLNB IMR90 Hi-C 24141950 FLNB 32012 1923 chr3 5960555 5961573 5961150 N NA NA NA NA NA NA EDEM1 731196 1924 chr3 62925188 62927226 62926715 Y CADPS NA NA NA NA NA THOC7 922371 1925 chr3 6381521 6383470 6382729 N NA NA NA NA NA NA EDEM1 1152162 1926 chr3 65023902 65027080 65025599 N NA NA ADAMTS9-AS2 IMR90 Hi-C 24141950 MAGI1 997429 1927 chr3 6530047 6545706 6532547 N NA NA NA NA NA NA EDEM1 1300688 1928 chr3 6811365 6813164 6811738 N NA NA NA NA NA NA EDEM1 1582006 1929 chr3 69773131 69775627 69774162 N NA MITF MITF IMR90 Hi-C 24141950 MITF 12959 1930 chr3 70047879 70052841 70048796 N NA NA NA NA NA NA MITF 259293 1931 chr3 71985294 72086621 72077664,72054454,72032140,72067752,72081763,72084313 N,Y,N,N,N,N NA;RYBP,EIF4E3;NA;NA;NA;NA NA SHQ1,LOC201617,RYBP IMR90 Hi-C 24141950 LOC201617 113787 1932 chr3 72125787 72144533 72135678,72128462,72141331 Y,N,N RYBP,EIF4E3,GPR27,EIF4E3,EIF4E3,PROK2;NA;NA NA SHQ1 IMR90 Hi-C 24141950 LOC201617 55875 1933 chr3 72191433 72196035 72193451,72194135 N,Y NA;RYBP,EIF4E3,GPR27,EIF4E3,EIF4E3 LOC201617 LOC201617 IMR90 Hi-C 24141950 LOC201617 4373 1934 chr3 72261777 72264804 72263966 N NA NA SHQ1,LOC201617,RYBP IMR90 Hi-C 24141950 LOC201617 61369 1935 chr3 72348473 72373017 72359890,72368185,72371784 Y,N,N RYBP;NA;NA NA SHQ1,RYBP IMR90 Hi-C 24141950 RYBP 122757 1936 chr3 72384749 72392024 72386285,72388406 Y,Y NA;RYBP NA SHQ1,RYBP,GXYLT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RYBP 103750 1937 chr3 72508267 72511493 72509801 N NA RYBP LOC201617,RYBP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RYBP 12493 1938 chr3 72597983 72599996 72599387 N NA NA RYBP,SHQ1 IMR90 Hi-C 24141950 RYBP 102209 1939 chr3 73159592 73161672 73159937 Y EBLN2 NA PDZRN3,CACNA1D,PROK2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 113473 1940 chr3 74757736 74762155 74760909 N NA NA NA NA NA NA FAM86DP 722111 1941 chr3 80816131 80828454 80820066 N NA NA NA NA NA NA GBE1 982496 1942 chr3 83266213 83268106 83267185 N NA NA NA NA NA NA GBE1 1455263 1943 chr3 84278167 84298652 84292970,84291003,84296225 N,N,N NA;NA;NA NA CADM2 K562 ChIA-PET 22265404 GBE1 2467217 1944 chr3 84353181 84359176 84353711 N NA NA NA NA NA NA GBE1 2542231 1945 chr3 87836937 87845128 87845058,87842360 N,N NA;NA NA NA NA NA NA HTR1F 186598 1946 chr3 87846541 87893040 87847920,87850771 N,N NA;NA NA NA NA NA NA HTR1F 138686 1947 chr3 88237778 88245961 88238791,88245175 N,N NA;NA ZNF654,C3orf38,CGGBP1 NA NA NA NA CGGBP1 38762 1948 chr3 94224432 94225355 94224978 N NA NA NA NA NA NA LOC255025 431752 1949 chr3 97629068 97629989 97629176 N NA NA NA NA NA NA MINA 61306 1950 chr3 9925620 9927180 9926243 Y LOC401052,ARPC4,TADA3,RPUSD3,CIDEC,CIDEC,CIDEC,JAGN1,IL17RE,IL17RE,IL17RC,IL17RC RPUSD3,JAGN1,IL17RC,CRELD1 IL17RE,IL17RC,JAGN1 MCF7,K562 ChIA-PET 22265404 JAGN1 5091 1951 chr3 99944039 99946813 99945790 N NA TBC1D23 C3orf26,MIR548G,TMEM30C,FILIP1L IMR90 Hi-C 24141950 TBC1D23 32873 1952 chr4 10163619 10179858 10173308,10166765,10175074 N,N,Y NA;NA;NA WDR1 SLC2A9,CLNK,WDR1,ZNF518B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WDR1 45046 1953 chr4 10182827 10189736 10185398 N NA NA WDR1,CLNK,ZNF518B K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WDR1 64254 1954 chr4 10204265 10259964 10205622,10242116,10205553 N,N,N NA;NA;NA NA WDR1 K562 ChIA-PET 22265404 WDR1 85692 1955 chr4 10371777 10375828 10373590 N NA NA NA NA NA NA ZNF518B 83204 1956 chr4 10386363 10392698 10388159 N NA NA SLC2A9,WDR1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF518B 66334 1957 chr4 104177037 104202003 104177448 N NA NA NA NA NA NA CENPE 57471 1958 chr4 105943590 105945231 105944194 N NA NA NA NA NA NA TET2 122611 1959 chr4 107445426 107447173 107446122 N NA NA NA NA NA NA TBCK 207565 1960 chr4 109279077 109283172 109282280 N NA NA LOC641518,LEF1,HADH IMR90 Hi-C 24141950 LOC641518 190396 1961 chr4 111168717 111171401 111169848 N NA ELOVL6 NA NA NA NA ELOVL6 48897 1962 chr4 119511486 119514275 119512798 N NA NA NA NA NA NA METTL14 92299 1963 chr4 122911133 122912553 122911845 N NA NA KIAA1109 IMR90 Hi-C 24141950 BBS7 119481 1964 chr4 123071513 123086540 123073472 N NA KIAA1109 KIAA1109 K562 ChIA-PET 22265404 KIAA1109 5218 1965 chr4 123696938 123698632 123697371 N NA CETN4P,BBS12,FGF2 SPATA5,NUDT6,FGF2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BBS12 43081 1966 chr4 123717850 123720172 123719377 Y FGF2 FGF2 FGF2,NUDT6,BBS12 IMR90 Hi-C 24141950 FGF2 27691 1967 chr4 124520560 124522137 124521270 Y NA NA NA NA NA NA SPATA5 676335 1968 chr4 127633761 127661457 127649209,127656905,127657086,127653466 N,N,Y,N NA;NA;NA;NA NA NA NA NA NA HSPA4L 1041996 1969 chr4 127662438 127702625 127699527 Y NA NA FAT4 IMR90 Hi-C 24141950 HSPA4L 1000828 1970 chr4 127710148 127839205 127771730,127837805 N,N NA;NA NA FAT4 IMR90 Hi-C 24141950 HSPA4L 864248 1971 chr4 127855297 127879912 127873755,127877582 N,N NA;NA NA NA NA NA NA HSPA4L 823541 1972 chr4 129388368 129406136 129392941,129389808 N,Y NA;NA NA PHF17,PGRMC2,SCLT1 IMR90 Hi-C 24141950 PGRMC2 178384 1973 chr4 129434275 129451538 129435319,129438782 N,N NA;NA NA PHF17,LARP1B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PGRMC2 224291 1974 chr4 129462927 129476575 129474446 N NA NA LARP1B,PGRMC2,PHF17 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PGRMC2 252943 1975 chr4 129502615 129506868 129503904 N NA NA PGRMC2,PHF17,LARP1B IMR90 Hi-C 24141950 PHF17 223911 1976 chr4 129508987 129529655 129523045 N NA NA PHF17,LARP1B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PHF17 201124 1977 chr4 129565251 129568333 129566189 N NA NA NA NA NA NA PHF17 162446 1978 chr4 130062401 130067693 130066811 N NA SCLT1,C4orf33 NA NA NA NA C4orf33 47572 1979 chr4 132299524 132302210 132300821 N NA NA NA NA NA NA C4orf33 2284695 1980 chr4 132645557 132647145 132646135 N NA NA NA NA NA NA C4orf33 2630728 1981 chr4 133264269 133278344 133266279 N NA NA NA NA NA NA C4orf33 3249440 1982 chr4 134451787 134456729 134454815 N NA NA NA NA NA NA C4orf33 4436958 1983 chr4 135226650 135251299 135249414 N NA NA NA NA NA NA SLC7A11 3912204 1984 chr4 138889654 138891060 138890630 N NA NA NA NA NA NA SLC7A11 272443 1985 chr4 139591652 139594887 139592906 N NA NA SLC7A11,LOC641364,LOC641365 IMR90 Hi-C 24141950 CCRN4L 342056 1986 chr4 139695415 139718705 139697201 Y CCRN4L NA NA NA NA NA CCRN4L 218238 1987 chr4 140104769 140113082 140110192 Y CCRN4L,ELF2 ELF2 ELF2,NAA15,C4orf49,NDUFC1 IMR90 Hi-C 24141950 ELF2 44163 1988 chr4 142232987 142257283 142253893 N NA NA IL15,INPP4B,ZNF330 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF330 90938 1989 chr4 142273519 142276535 142274402 N NA NA IL15,INPP4B IMR90 Hi-C 24141950 ZNF330 131470 1990 chr4 14857026 14859272 14858240 Y CPEB2 NA CPEB2,LOC441009 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CPEB2 145026 1991 chr4 14864070 14865032 14864697 N NA NA NA NA NA NA CPEB2 139266 1992 chr4 15091969 15093621 15092482 N NA NA NA NA NA NA CPEB2 87671 1993 chr4 1511670 1516413 1513609,1514480 N,N NA;NA NA TMED11P,RNF212,SPON2,C4orf42,CTBP1,CRIPAK,KIAA1530 IMR90 Hi-C 24141950 CRIPAK 126330 1994 chr4 15149219 15152929 15151618 Y NA NA CPEB2 IMR90 Hi-C 24141950 CPEB2 144921 1995 chr4 15153993 15156650 15155379 N NA NA CPEB2 IMR90 Hi-C 24141950 CPEB2 149695 1996 chr4 1517237 1522844 1521676 N NA NA TMED11P,RNF212,SPON2,C4orf42,CTBP1,CRIPAK,KIAA1530 IMR90 Hi-C 24141950 CRIPAK 131897 1997 chr4 151951381 151954278 151953286 N NA LRBA LRBA,RPS3A K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LRBA 14732 1998 chr4 155125631 155130464 155126861,155129783 N,N NA;NA NA NA NA NA NA DCHS2 282413 1999 chr4 155133868 155139517 155138619 N NA NA NA NA NA NA DCHS2 273360 2000 chr4 1570202 1582570 1581831 N NA NA RNF212,TMED11P,KIAA1530,FAM53A,SLBP,CTBP1,C4orf42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLBP 131460 2001 chr4 15906274 15909333 15907810 Y FBXL5,BST1,FGFBP1 NA CC2D2A,FGFBP1,BST1 IMR90 Hi-C 24141950 FAM200B 222922 2002 chr4 159102048 159104970 159104004 Y NA TMEM144 NA NA NA NA TMEM144 26431 2003 chr4 1592695 1597000 1593794,1595637 N,N NA;NA NA FAM53A IMR90 Hi-C 24141950 SLBP 117030 2004 chr4 163660653 163663419 163661568 N NA NA NA NA NA NA NAF1 424654 2005 chr4 164113394 164118606 164116737 N NA NAF1 NA NA NA NA NAF1 25321 2006 chr4 170695429 170698507 170695983 N NA C4orf27 NA NA NA NA C4orf27 16336 2007 chr4 172550321 172553511 172551263 N NA NA NA NA NA NA GALNT7 1536393 2008 chr4 174528947 174530472 174530028 N NA NA NA NA NA NA HAND2 77569 2009 chr4 175340487 175342918 175341681 N NA NA NA NA NA NA FBXO8 135085 2010 chr4 1767979 1771136 1769437 N NA TMEM129,TACC3,FGFR3 FGFR3 MCF7 ChIA-PET 22265404 FGFR3 23903 2011 chr4 1785723 1788308 1787040 N NA FGFR3 LETM1,FGFR3 IMR90 Hi-C 24141950 FGFR3 6731 2012 chr4 178957694 178960023 178959042 N NA NA NA NA NA NA AGA 594037 2013 chr4 18159455 18161159 18160497 N NA NA NA NA NA NA LCORL 135972 2014 chr4 183886097 183892859 183891218 N NA DCTD WWC2,FAM92A3 IMR90 Hi-C 24141950 DCTD 47467 2015 chr4 183894145 183898341 183896997 N NA NA WWC2,FAM92A3 IMR90 Hi-C 24141950 DCTD 55515 2016 chr4 183932288 183933112 183932697 N NA NA WWC2,FAM92A3 IMR90 Hi-C 24141950 C4orf38 87240 2017 chr4 18418423 18421243 18419672 N NA NA NA NA NA NA LCORL 394940 2018 chr4 184266986 184271922 184270333 Y NA NA CLDN24,CLDN22 IMR90 Hi-C 24141950 CDKN2AIP 93867 2019 chr4 184315605 184317685 184316702 N NA CDKN2AIP CLDN24,C4orf38,WWC2,CLDN22 IMR90 Hi-C 24141950 CDKN2AIP 48104 2020 chr4 184318731 184321181 184319718 N NA CDKN2AIP WWC2,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 44608 2021 chr4 185186105 185190498 185187204,185189387 Y,N IRF2,CASP3;NA NA IRF2,CASP3,LOC728175,CCDC111,MLF1IP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IRF2 205228 2022 chr4 185423828 185436500 185435670 N NA IRF2 LOC728175,IRF2,CCDC111,CASP3 IMR90 Hi-C 24141950 IRF2 28102 2023 chr4 185446468 185460087 185457497 N NA NA IRF2,CASP3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IRF2 50742 2024 chr4 186036326 186037753 186037291 Y NA SLC25A4 SLC25A4,LOC100506229,ACSL1,KIAA1430 IMR90 Hi-C 24141950 SLC25A4 26664 2025 chr4 187747165 187804838 187761662,187766642,187764781,187799666 N,Y,N,N NA;NA;NA;NA NA FAT1,LOC339975 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAT1 102178 2026 chr4 187807294 187819319 187810370 Y NA NA FAT1 IMR90 Hi-C 24141950 FAT1 162307 2027 chr4 190196978 190201339 190198049,190200792 N,N NA;NA NA LOC401164 IMR90 Hi-C 24141950 FRG1 660635 2028 chr4 190504362 190515173 190511233 N NA NA NA NA NA NA FRG1 346801 2029 chr4 190796075 190798624 190797318 N NA NA NA NA NA NA FRG1 63350 2030 chr4 190802903 190808357 190804300 N NA NA NA NA NA NA FRG1 53617 2031 chr4 190817828 190819668 190818849 N NA FRG1 NA NA NA NA FRG1 42306 2032 chr4 190823844 190827624 190825786 N NA FRG1 NA NA NA NA FRG1 34350 2033 chr4 190840598 190843349 190842570 N NA FRG1 NA NA NA NA FRG1 18625 2034 chr4 2030093 2039858 2038792 N NA WHSC2,C4orf48,NAT8L POLN,NAT8L,WHSC2,C4orf48,MXD4,WHSC1,ZFYVE28 IMR90 Hi-C 24141950 C4orf48 3862 2035 chr4 22999306 23060064 23000036 N NA NA NA NA NA NA DHX15 1526120 2036 chr4 26056493 26065903 26065200 N NA NA RBPJ IMR90 Hi-C 24141950 C4orf52 140679 2037 chr4 27350822 27353594 27351970 Y NA NA NA NA NA NA STIM2 488509 2038 chr4 27447612 27456686 27450002 N NA NA NA NA NA NA STIM2 585299 2039 chr4 31999968 32016174 32000561 N NA NA NA NA NA NA STIM2 5137655 2040 chr4 32023216 32063511 32024494 N NA NA NA NA NA NA STIM2 5160903 2041 chr4 34313227 34338352 34337081 N NA NA NA NA NA NA PGM2 3489930 2042 chr4 37001347 37017068 37003736 N NA NA NA NA NA NA PGM2 811214 2043 chr4 38243986 38246371 38244844 N NA NA FLJ13197,KLF3 IMR90 Hi-C 24141950 PGM2 415704 2044 chr4 38318680 38322734 38320663 Y NA NA FLJ13197,KLF3,TBC1D1,TLR10,PGM2,TLR6 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF3 343056 2045 chr4 38330490 38331628 38331087 N NA NA KLF3,FLJ13197,TBC1D1 IMR90 Hi-C 24141950 KLF3 334162 2046 chr4 38384036 38385262 38384787 N NA NA FLJ13197,KLF3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF3 280528 2047 chr4 38524128 38527163 38525598 N NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 138627 2048 chr4 38529666 38535656 38531269 N NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 130134 2049 chr4 40191551 40193827 40192752 N NA RHOH NA NA NA NA RHOH 4700 2050 chr4 40290871 40295794 40294294,40291386 Y,Y RBM47;RHOH NA NA NA NA NA RHOH 92344 2051 chr4 40312806 40315294 40314135 N NA NA N4BP2,RHOH,LOC344967,RBM47,NSUN7,CHRNA9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RHOH 114279 2052 chr4 40317971 40320029 40319092 N NA NA N4BP2,RHOH,RBM47,LOC344967,NSUN7,CHRNA9 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RHOH 119444 2053 chr4 4032844 4035412 4034522 N NA NA NA NA NA NA FAM86EP 75696 2054 chr4 4779989 4781457 4780979 N NA NA STX18,LOC100507266,D4S234E,MSX1 IMR90 Hi-C 24141950 MSX1 79935 2055 chr4 49162282 49169881 49163483 N NA NA NA NA NA NA OCIAD1 329222 2056 chr4 49257666 49258810 49258003 N NA NA NA NA NA NA OCIAD1 424606 2057 chr4 49261955 49267321 49263917,49266921 N,N NA;NA NA NA NA NA NA OCIAD1 428895 2058 chr4 49267853 49269092 49268507 N NA NA NA NA NA NA OCIAD1 434793 2059 chr4 49271821 49275220 49273431 N NA NA NA NA NA NA OCIAD1 438761 2060 chr4 49288705 49290389 49288786 N NA NA NA NA NA NA OCIAD1 455645 2061 chr4 49317702 49319091 49319030 N NA NA NA NA NA NA OCIAD1 484642 2062 chr4 49322583 49326363 49324394 N NA NA NA NA NA NA OCIAD1 489523 2063 chr4 49496261 49502483 49497085 N NA NA NA NA NA NA OCIAD1 663201 2064 chr4 49511496 49518456 49512946,49517116 N,N NA;NA NA NA NA NA NA OCIAD1 678436 2065 chr4 49570641 49572664 49571073 N NA NA NA NA NA NA OCIAD1 737581 2066 chr4 4961394 4974068 4961658 N NA NA STK32B,EVC2,STX18,LOC100507266,D4S234E,EVC,CRMP1 IMR90 Hi-C 24141950 MSX1 100002 2067 chr4 5038551 5041019 5039493 N NA NA STK32B,EVC2,EVC IMR90 Hi-C 24141950 MSX1 177159 2068 chr4 55436336 55438931 55437703 Y KIT NA KIT IMR90 Hi-C 24141950 CHIC2 505521 2069 chr4 56530586 56533484 56532472 N NA NMU LOC644145 IMR90 Hi-C 24141950 NMU 28121 2070 chr4 56597578 56601093 56600249 N NA NA NMU,CLOCK K562,MCF7 ChIA-PET 22265404 NMU 95113 2071 chr4 66105271 66108935 66107510 Y NA NA NA NA NA NA CENPC1 2302321 2072 chr4 6752454 6756778 6754650 N NA MRFAP1L1,CNO,KIAA0232 LOC100129931,TADA2B,KIAA0232,TBC1D14,S100P IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KIAA0232 27681 2073 chr4 6768837 6771312 6770430 N NA KIAA0232 KIAA0232,TBC1D14,LOC100129931,GRPEL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0232 13147 2074 chr4 68015043 68020856 68017468 N NA NA NA NA NA NA CENPC1 390400 2075 chr4 69729551 69731648 69730331 N NA NA NA NA NA NA YTHDC1 513727 2076 chr4 70208142 70210759 70209660 N NA NA NA NA NA NA YTHDC1 992318 2077 chr4 71757489 71759195 71758251 N NA MOB1B MOB1B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MOB1B 8862 2078 chr4 71925191 71925850 71925401 N NA NA NA NA NA NA DCK 65926 2079 chr4 72722507 72724591 72723692 N NA NA NA NA NA NA ADAMTS3 709925 2080 chr4 74568985 74571991 74570454,74569190 Y,N ANKRD17,MTHFD2L,IL8,CXCL3,CXCL2;NA IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 34232 2081 chr4 74572784 74578651 74574256,74573776,74577989 N,N,N NA;NA;NA IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 27572 2082 chr4 74974295 74976241 74975341 Y CXCL1,AREG CXCL2,MTHFD2L RASSF6 IMR90 Hi-C 24141950 CXCL2 9298 2083 chr4 75606567 75609039 75608336 N NA NA EREG,MTHFD2L,EPGN IMR90 Hi-C 24141950 EREG 375707 2084 chr4 79640294 79680119 79642361,79648701 Y,N BMP2K;NA BMP2K BMP2K,LOC100505702,ANXA3,FRAS1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BMP2K 17413 2085 chr4 79685943 79691142 79689786 N NA BMP2K LOC100505702,BMP2K IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BMP2K 6390 2086 chr4 81054865 81059857 81056852 Y ANTXR2 NA PAQR3,ANTXR2,PRDM8,FGF5 IMR90 Hi-C 24141950 ANTXR2 60388 2087 chr4 81080936 81085799 81082734 N NA NA PRDM8 IMR90 Hi-C 24141950 ANTXR2 86459 2088 chr4 81154451 81155635 81155190 N NA NA PRDM8,FGF5 IMR90 Hi-C 24141950 ANTXR2 159974 2089 chr4 82709950 82713567 82711818 N NA NA NA NA NA NA HNRNPD 581582 2090 chr4 83201919 83208218 83206317 N NA NA NA NA NA NA HNRNPD 86931 2091 chr4 84416182 84430841 84417073 N NA HELQ,MRPS18C,FAM175A,AGPAT9 AGPAT9 IMR90 Hi-C 24141950 FAM175A 9892 2092 chr4 84550160 84552796 84551431 Y HPSE,HPSE,HPSE NA AGPAT9 K562 ChIA-PET 22265404 AGPAT9 93093 2093 chr4 84678708 84680502 84679636 N NA NA NA NA NA NA AGPAT9 221641 2094 chr4 85216932 85220254 85219920 N NA NA NA NA NA NA WDFY3 667290 2095 chr4 8538019 8541202 8539035 N NA NA GPR78 IMR90 Hi-C 24141950 CPZ 53185 2096 chr4 8546163 8558821 8549288,8551179 N,Y NA;NA CPZ ACOX3,METTL19,GPR78,CPZ IMR90 Hi-C 24141950 CPZ 35566 2097 chr4 90809515 90811759 90810502 Y MMRN1 NA NA NA NA NA TIGD2 775547 2098 chr4 9146917 9158156 9154966 Y NA NA NA NA NA NA CPZ 552530 2099 chr4 93101993 93114781 93104875 N NA NA NA NA NA NA SMARCAD1 2013978 2100 chr4 99763426 99765940 99764476 N NA NA RAP1GDS1,TSPAN5,EIF4E IMR90 Hi-C 24141950 EIF4E 85846 2101 chr5 100367666 100379063 100377796 N NA NA NA NA NA NA GIN1 2076779 2102 chr5 101994831 102007848 102006847 N NA NA NA NA NA NA GIN1 447994 2103 chr5 10317536 10320651 10318092,10319550,10319573 N,N,N NA;NA;NA CMBL,MARCH6 CMBL,MARCH6,ROPN1L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CMBL 9368 2104 chr5 104336999 104370484 104369495 N NA NA NA NA NA NA NUDT12 1438509 2105 chr5 104575149 104582410 104581421 N NA NA NA NA NA NA NUDT12 1676659 2106 chr5 104726951 104729443 104728733 N NA NA NA NA NA NA NUDT12 1828461 2107 chr5 108759888 108761636 108760749 N NA PJA2 PJA2 K562 ChIA-PET 22265404 PJA2 14213 2108 chr5 108905118 108907100 108906197 N NA NA NA NA NA NA MAN2A1 118056 2109 chr5 111882593 111884816 111884165 N NA NA APC IMR90 Hi-C 24141950 APC 158386 2110 chr5 112304533 112306519 112305445 N NA REEP5,DCP2 APC,SRP19,REEP5,YTHDC2,MCC,DCP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DCP2 5888 2111 chr5 1181321 1187689 1183009,1186158 Y,N SLC6A19,SLC6A18;NA SLC6A19 LOC100506688,TERT,SLC6A19,TRIP13,SLC6A3,LPCAT1,LOC728613 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC6A19 14021 2112 chr5 118773228 118775536 118774994 N NA HSD17B4 NA NA NA NA HSD17B4 12602 2113 chr5 121029039 121030827 121030009 N NA NA NA NA NA NA SRFBP1 266829 2114 chr5 121437625 121442097 121438678 N NA NA ZNF474,LOC100505841,LOX,SRFBP1 IMR90 Hi-C 24141950 SRFBP1 139969 2115 chr5 121447611 121450323 121449085 N NA NA ZNF474,LOC100505841,SRFBP1,LOX K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SRFBP1 149955 2116 chr5 124143914 124225807 124144715 N NA NA ZNF608 IMR90 Hi-C 24141950 CSNK1G3 1296121 2117 chr5 126015290 126017968 126016119 Y LMNB1,LMNB1 NA LMNB1,MEGF10 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PHAX 78683 2118 chr5 126083001 126085960 126084005 N NA LMNB1 MEGF10,LMNB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNB1 26355 2119 chr5 127075149 127079562 127075474 N NA NA NA NA NA NA PRRC1 221840 2120 chr5 127088565 127089857 127088843 N NA NA SLC12A2,FLJ33630 IMR90 Hi-C 24141950 PRRC1 235256 2121 chr5 130149697 130154347 130153614 N NA NA NA NA NA NA HINT1 346687 2122 chr5 130231123 130234050 130233441 N NA NA NA NA NA NA HINT1 266984 2123 chr5 132122224 132125633 132124370 N NA SEPT8,SHROOM1 RAD50,IL4,SHROOM1,LOC553103,SLC22A4,IL5,SEPT8,CCNI2,SOWAHA,AFF4,SLC22A5,KIF3A,UQCRQ,GDF9,LEAP2,IL3,IRF1,IL13 IMR90,K562,HELA,GM12878 Hi-C,5C 24141950,22955621 SEPT8 9157 2124 chr5 133583180 133587443 133585571 Y PPP2CA,UBE2B,SEC24A PPP2CA SKP1,PPP2CA,MIR3661 K562,MCF7 ChIA-PET 22265404 PPP2CA 21230 2125 chr5 133800171 133803762 133802144 N NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 52573 2126 chr5 133838585 133843676 133839306,133842042 N,N NA;NA PHF15 PHF15,UBE2B,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF15 18122 2127 chr5 133847397 133852064 133847827 Y NA PHF15 PHF15,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B,UBE2B,SKP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF15 9734 2128 chr5 134451322 134455106 134452707 N NA NA H2AFY,PCBD2,CATSPER3,LOC340073 IMR90 Hi-C 24141950 PITX1 81358 2129 chr5 134468029 134476893 134469990,134470901 N,N NA;NA NA PCBD2,LOC340073,CATSPER3,H2AFY,PITX1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PITX1 98065 2130 chr5 134606941 134648250 134607997 N NA NA H2AFY,LOC340073,CATSPER3,PCBD2,PITX1 IMR90 Hi-C 24141950 H2AFY 87327 2131 chr5 134791042 134799205 134792700,134794828 N,N NA;NA NA C5orf20,H2AFY,CXCL14 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 H2AFY 55465 2132 chr5 134812721 134836847 134814416,134831421,134817716 N,N,N NA;NA;NA NA CXCL14,NEUROG1,SLC25A48,C5orf20,TIFAB IMR90 Hi-C 24141950 H2AFY 77144 2133 chr5 135801253 135903032 135802639 N NA NA NA NA NA NA SMAD5 332717 2134 chr5 137389422 137391574 137390845 N NA FAM13B FAM13B,BRD8,KIF20A IMR90 Hi-C 24141950 FAM13B 20620 2135 chr5 137946285 137947726 137947117 N NA HSPA9 CTNNA1,SIL1,PAIP2,SLC23A1,MATR3 IMR90 Hi-C 24141950 HSPA9 34967 2136 chr5 138035361 138039124 138038316 N NA CTNNA1 SIL1,CTNNA1,MATR3,LRRTM2,HSPA9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CTNNA1 49983 2137 chr5 138581231 138582765 138582185 N NA SIL1,MATR3 SIL1,CTNNA1,LRRTM2,HSPA9,MATR3 IMR90 Hi-C 24141950 MATR3 26676 2138 chr5 138876586 138900147 138897615,138883288 Y,N MATR3,MATR3,DNAJC18,PSD2;NA TMEM173,UBE2D2 SLC23A1,UBE2D2,DNAJC18,MATR3,PAIP2,ECSCR,TMEM173,SPATA24,C5orf65,MZB1,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 14243 2139 chr5 138922116 138923663 138923084 N NA UBE2D2 SPATA24,DNAJC18,ECSCR,TMEM173,UBE2D2 IMR90 Hi-C 24141950 UBE2D2 17088 2140 chr5 139087210 139106109 139090070 N NA NA CXXC5,UBE2D2,DNAJC18 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CXXC5 58909 2141 chr5 139484994 139490152 139487337 N NA PURA,IGIP CYSTM1,NRG2,PSD2,IGIP IMR90 Hi-C 24141950 PURA 3556 2142 chr5 141068986 141073561 141071178,141072793 N,N NA;NA FCHSD1,ARAP3 ARAP3,PCDH1,LOC729080,KIAA0141,PCDH12,RNF14,GNPDA1,NDFIP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARAP3 7186 2143 chr5 141293175 141294565 141293962 N NA KIAA0141 NA NA NA NA KIAA0141 8820 2144 chr5 141403299 141405806 141404634 Y DIAPH1,FCHSD1 GNPDA1 GNPDA1,NDFIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GNPDA1 10679 2145 chr5 141734739 141756769 141744248,141736567,141740538 N,Y,N NA;ARHGAP26;NA SPRY4 NDFIP1,FGF1,SPRY4,GNPDA1,RNF14,ARHGAP26 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SPRY4 30119 2146 chr5 141819216 141848849 141826333 N NA NA NDFIP1,SPRY4,FGF1,GNPDA1 IMR90 Hi-C 24141950 SPRY4 114596 2147 chr5 141849749 141856912 141851973 Y NA NA SPRY4,GNPDA1,NDFIP1,FGF1,RNF14 IMR90 Hi-C 24141950 SPRY4 145129 2148 chr5 141886794 141895528 141887826 N NA NA SPRY4,NDFIP1 IMR90 Hi-C 24141950 SPRY4 182174 2149 chr5 142964697 142970186 142965785 Y NR3C1,NR3C1 NA NR3C1,ARHGAP26,KCTD16,YIPF5,HMHB1 IMR90 Hi-C 24141950 YIPF5 580092 2150 chr5 145034090 145062667 145061464 N NA NA KCTD16,SH3RF2 IMR90 Hi-C 24141950 PRELID2 152232 2151 chr5 148037969 148040386 148039455 N NA NA HTR4 IMR90 Hi-C 24141950 FBXO38 274423 2152 chr5 148834791 148838985 148835966 N NA NA NA NA NA NA CSNK1A1 92022 2153 chr5 148843502 148847079 148846151 N NA NA CSNK1A1,PCYOX1L,IL17B,MIR143HG,ARHGEF37 IMR90 Hi-C 24141950 CSNK1A1 83928 2154 chr5 149044765 149047348 149045740 Y CSNK1A1,SLC26A2 NA ARHGEF37,PPARGC1B,PDE6A,SLC26A2,TIGD6,HMGXB3,CSF1R,PDGFRB,SLC6A7,CAMK2A IMR90 Hi-C 24141950 PPARGC1B 62467 2155 chr5 149081413 149084646 149083016 N NA PPARGC1B PPARGC1B,PDE6A,SLC26A2,TIGD6,ARHGEF37,HMGXB3,CSF1R IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPARGC1B 25169 2156 chr5 150151947 150155055 150153863 N NA DCTN4,C5orf62 NA NA NA NA C5orf62 2453 2157 chr5 151086324 151089768 151089030 Y SLC36A3 ATOX1 SPARC,ATOX1 IMR90 Hi-C 24141950 ATOX1 48442 2158 chr5 154023878 154030937 154027693 N NA NA C5orf4,MFAP3,FAM114A2,LARP1,CNOT8,HAND1,SAP30L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LARP1 61525 2159 chr5 154033580 154049965 154034938,154034246 N,N NA;NA LARP1 MFAP3,FAM114A2,LARP1,C5orf4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LARP1 42497 2160 chr5 154059789 154080325 154062424 N NA LARP1 LARP1,C5orf4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LARP1 12137 2161 chr5 159065304 159067867 159066070 N NA NA ADRA1B,LOC285627 IMR90 Hi-C 24141950 TTC1 368313 2162 chr5 163771292 163811731 163783774,163773752,163786264 N,N,Y NA;NA;NA NA NA NA NA NA MAT2B 841061 2163 chr5 169728120 169736802 169729789,169734232 N,N NA;NA LCP2,LOC257358 LCP2,KCNIP1,C5orf58 IMR90 Hi-C 24141950 LCP2 3298 2164 chr5 170921140 170940721 170921862 N NA NA FBXW11,NPM1,MIR3912,FGF18 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NPM1 106432 2165 chr5 172214283 172222117 172216318 Y C5orf41,DUSP1 DUSP1,ERGIC1 ERGIC1,DUSP1,LOC100268168,RPL26L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP1 16080 2166 chr5 172228888 172251543 172229814,172234373 N,Y NA;NA DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ERGIC1 9680 2167 chr5 172880058 172884198 172881989 N NA NA LOC285593,STC2,BOD1,CPEB4,NKX2-5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BOD1 159468 2168 chr5 173096355 173099897 173097951 N NA NA CPEB4,C5orf47,HMP19 IMR90 Hi-C 24141950 BOD1 52689 2169 chr5 173188693 173194560 173190942,173193522 N,Y NA;NA NA CPEB4,C5orf47 IMR90 Hi-C 24141950 CPEB4 120771 2170 chr5 173201595 173210927 173205847,173209176 Y,Y CPEB4;CPEB4 NA CPEB4 IMR90 Hi-C 24141950 CPEB4 104404 2171 chr5 173212271 173214858 173213209 N NA NA CPEB4 IMR90 Hi-C 24141950 CPEB4 100473 2172 chr5 173247890 173251299 173249654,173248374 N,N NA;NA NA BOD1,CPEB4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CPEB4 64032 2173 chr5 173265274 173267827 173266478 N NA CPEB4 CPEB4,C5orf47 IMR90 Hi-C 24141950 CPEB4 47504 2174 chr5 173276636 173284649 173280664,173282847,173279213,173282865 Y,Y,N,Y NA;NA;NA;NA CPEB4 BOD1,CPEB4,C5orf47 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CPEB4 30682 2175 chr5 173285543 173295382 173288156,173291551,173293889 N,N,N NA;NA;NA CPEB4 BOD1,C5orf47,CPEB4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CPEB4 19949 2176 chr5 173304686 173306094 173305465 N NA CPEB4 BOD1,CPEB4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CPEB4 9237 2177 chr5 173585032 173588128 173586780 Y NA NA NA NA NA NA CPEB4 269701 2178 chr5 17400173 17403262 17401673 N NA NA BASP1,LOC285696 IMR90 Hi-C 24141950 ZNF622 934279 2179 chr5 1744639 1750168 1746760 Y NA MRPL36 NA NA NA NA MRPL36 49788 2180 chr5 174621831 174623620 174622812 N NA NA DRD1 IMR90 Hi-C 24141950 SFXN1 281894 2181 chr5 175643295 175645305 175644360 N NA LOC643201,C5orf25 LOC643201 IMR90 Hi-C 24141950 LOC643201 16997 2182 chr5 177507933 177510181 177509223 N NA N4BP3,RMND5B N4BP3,GMCL1P1,NHP2,AGXT2L2,HNRNPAB IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 N4BP3 30375 2183 chr5 178230106 178260776 178259621 N NA AACSP1,ZNF354B AACSP1,ZNF879,AGXT2L2,GRM6,COL23A1 IMR90 Hi-C 24141950 ZNF354B 26178 2184 chr5 178952303 178958584 178957825 N NA RUFY1 RUFY1 MCF7 ChIA-PET 22265404 RUFY1 18978 2185 chr5 180292543 180302086 180301111 Y MGAT1,MGAT1,BTNL8 LOC729678,LOC100859930,ZFP62 ZFP62,MGAT1,BTNL9,TRIM7,LOC729678,LOC100859930,BTNL8 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 ZFP62 4257 2186 chr5 180525691 180528407 180526707 N NA NA MGAT1 IMR90 Hi-C 24141950 BTNL9 58466 2187 chr5 180694814 180716646 180708279 N NA TRIM41,GNB2L1,TRIM52 TRIM52 K562 ChIA-PET 22265404 TRIM52 6695 2188 chr5 180900114 180900950 180900487 N NA NA NA NA NA NA TRIM52 211995 2189 chr5 18796914 18801217 18800051 N NA NA NA NA NA NA ZNF622 2331020 2190 chr5 19288732 19297208 19289273 N NA NA NA NA NA NA GUSBP1 2162381 2191 chr5 27217213 27219570 27217812 N NA NA NA NA NA NA LOC643401 252829 2192 chr5 28804360 28812312 28810016 N NA NA NA NA NA NA LOC643401 1331961 2193 chr5 29793979 29797446 29796366 N NA NA NA NA NA NA DROSHA 1734836 2194 chr5 29969712 29980173 29972988,29977034 N,N NA;NA NA NA NA NA NA DROSHA 1552109 2195 chr5 29981397 29983881 29982774 N NA NA NA NA NA NA DROSHA 1548401 2196 chr5 29992551 29995361 29993466 N NA NA NA NA NA NA DROSHA 1536921 2197 chr5 30197443 30199972 30198379 N NA NA NA NA NA NA DROSHA 1332310 2198 chr5 34241714 34245317 34244738 N NA NA NA NA NA NA C1QTNF3-AMACR 117081 2199 chr5 34524840 34544398 34526005 Y NA NA RAI14,RAD1,BRIX1,TTC23L,DNAJC21 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 112035 2200 chr5 34586672 34589891 34588003 Y NA NA RAI14 IMR90 Hi-C 24141950 RAI14 66542 2201 chr5 36720632 36725859 36725333 N NA NA NIPBL,LOC646719 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC646719 150937 2202 chr5 36739539 36742261 36740374 N NA NA LOC646719,NIPBL MCF7,K562 ChIA-PET 22265404 LOC646719 134535 2203 chr5 36743218 36746321 36744833 Y NA NA LOC646719,NIPBL MCF7,K562 ChIA-PET 22265404 LOC646719 130475 2204 chr5 38659148 38662147 38660546 Y LIFR NA EGFLAM,LIFR IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EGFLAM-AS4 368060 2205 chr5 41882523 41885230 41883471 N NA OXCT1,C5orf51,FBXO4 C5orf51 K562 ChIA-PET 22265404 OXCT1 11732 2206 chr5 43104339 43115730 43105896 Y NA LOC100132356,ZNF131 LOC153684,LOC100132356,ZNF131,LOC648987,NIM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF131 5912 2207 chr5 43319717 43323043 43321069 N NA HMGCS1 C5orf28,HMGCS1,CCL28 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 HMGCS1 6122 2208 chr5 43772119 43774254 43773004 N NA NA NA NA NA NA NNT 169328 2209 chr5 5024423 5027119 5025993 N NA NA NA NA NA NA KIAA0947 395688 2210 chr5 5348706 5351592 5350476 N NA NA ADAMTS16 IMR90 Hi-C 24141950 KIAA0947 71215 2211 chr5 5371704 5375053 5374543 N NA KIAA0947 NA NA NA NA KIAA0947 47754 2212 chr5 53981231 54035783 54034108,54032029 Y,N NA;NA NA SNX18,HSPB3,GPX8,CDC20B IMR90 Hi-C 24141950 SNX18 167642 2213 chr5 54036800 54041934 54038275,54040353 N,Y NA;SNX18,SNX18 NA SNX18,GPX8,CDC20B IMR90 Hi-C 24141950 SNX18 223211 2214 chr5 55333025 55334304 55333845 N NA IL6ST ANKRD55 IMR90 Hi-C 24141950 IL6ST 42204 2215 chr5 55679367 55680628 55680034 N NA NA MAP3K1 IMR90 Hi-C 24141950 IL6ST 388546 2216 chr5 55707523 55712296 55711345 Y MAP3K1 NA MAP3K1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K1 398604 2217 chr5 5571391 5573954 5572904 N NA NA NA NA NA NA KIAA0947 148584 2218 chr5 55789077 55791460 55790321 Y NA NA MAP3K1 IMR90 Hi-C 24141950 MAP3K1 319440 2219 chr5 5582833 5588956 5584675 N NA NA NA NA NA NA KIAA0947 160026 2220 chr5 5595015 5603941 5596257,5598432 N,N NA;NA NA NA NA NA NA KIAA0947 172208 2221 chr5 56678127 56680003 56679209 N NA NA PLK2,ACTBL2 IMR90 Hi-C 24141950 GPBP1 208352 2222 chr5 58232061 58235222 58233010 Y PDE4D NA NA NA NA NA DEPDC1B 1760771 2223 chr5 60870231 60871937 60871088 N NA NA C5orf64,ZSWIM6 IMR90 Hi-C 24141950 ZSWIM6 242131 2224 chr5 61556781 61558947 61557663 N NA KIF2A KIF2A K562 ChIA-PET 22265404 KIF2A 43042 2225 chr5 61561268 61562519 61561569 N NA KIF2A KIF2A K562 ChIA-PET 22265404 KIF2A 39470 2226 chr5 61574919 61582451 61581340 N NA KIF2A KIF2A K562 ChIA-PET 22265404 KIF2A 19538 2227 chr5 6407716 6409660 6408512 N NA MED10 NA NA NA NA MED10 29077 2228 chr5 67100801 67113307 67112518,67109867 N,N NA;NA NA NA NA NA NA PIK3R1 398277 2229 chr5 67714392 67720857 67716373,67719384 N,N NA;NA NA NA NA NA NA PIK3R1 202808 2230 chr5 67722019 67731727 67727732,67730243,67724151 N,N,N NA;NA;NA NA PIK3R1 IMR90 Hi-C 24141950 PIK3R1 210435 2231 chr5 67750735 67754770 67752672 Y PIK3R1 NA PIK3R1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PIK3R1 239151 2232 chr5 67993582 67995471 67994293 N NA NA NA NA NA NA SLC30A5 394305 2233 chr5 68337957 68339324 68338718 Y NA NA NA NA NA NA SLC30A5 50452 2234 chr5 68339957 68343418 68341807 N NA SLC30A5 OCLN IMR90 Hi-C 24141950 SLC30A5 46358 2235 chr5 68373788 68375798 68375032 N NA SLC30A5 NA NA NA NA SLC30A5 13978 2236 chr5 68377937 68380795 68379449 N NA SLC30A5 NA NA NA NA SLC30A5 8981 2237 chr5 6846334 6848291 6846983 N NA NA NA NA NA NA PAPD7 131616 2238 chr5 69696821 69697589 69697183 N NA NA NA NA NA NA MARVELD2 985882 2239 chr5 70393214 70394547 70394041 N NA NA NA NA NA NA BDP1 356895 2240 chr5 71227924 71229698 71228909 N NA NA NA NA NA NA MAP1B 173420 2241 chr5 71836294 71837828 71837212 N NA NA TNPO1,PTCD2,ZNF366 IMR90 Hi-C 24141950 PTCD2 220094 2242 chr5 71856953 71858848 71857757 N NA NA TNPO1,ZNF366,PTCD2 IMR90 Hi-C 24141950 PTCD2 240753 2243 chr5 71882886 71884418 71884014 N NA NA ZNF366,TNPO1,PTCD2 IMR90 Hi-C 24141950 TNPO1 228000 2244 chr5 71892416 71895558 71893495 N NA NA TNPO1,ZNF366,PTCD2 IMR90 Hi-C 24141950 TNPO1 216860 2245 chr5 75658683 75660760 75659683 N NA IQGAP2 IQGAP2 K562 ChIA-PET 22265404 IQGAP2 38389 2246 chr5 75667466 75670148 75668629 N NA IQGAP2 IQGAP2 IMR90 Hi-C 24141950 IQGAP2 29001 2247 chr5 77972782 77975711 77974258 Y NA LHFPL2 SCAMP1,LHFPL2,ARSB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LHFPL2 28134 2248 chr5 77994976 77997065 77995620 N NA NA ARSB,LHFPL2,SCAMP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LHFPL2 50328 2249 chr5 78881537 78885141 78882189,78884660 N,N NA;NA PAPD4 PAPD4 K562 ChIA-PET 22265404 PAPD4 23102 2250 chr5 79138785 79143649 79139570,79141598 N,N NA;NA NA DMGDH,CMYA5,PAPD4,THBS4 IMR90 Hi-C 24141950 PAPD4 230542 2251 chr5 79148217 79151029 79149709 N NA NA SERINC5,CMYA5,PAPD4 IMR90 Hi-C 24141950 PAPD4 239974 2252 chr5 7989288 7992257 7991491 N NA NA NA NA NA NA MTRR 120071 2253 chr5 8011556 8014703 8014562,8012888 N,N NA;NA NA NA NA NA NA MTRR 142339 2254 chr5 81052754 81103568 81055410,81075905 N,N NA;NA SSBP2 SSBP2,ATG10,ZCCHC9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SSBP2 5682 2255 chr5 81144313 81150680 81147880,81146500 Y,N NA;NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP2 97241 2256 chr5 81651758 81665165 81653271 Y RPS23 NA ATP6AP1L,XRCC4,VCAN,TMEM167A IMR90 Hi-C 24141950 ATP6AP1L 50592 2257 chr5 81682871 81686673 81684598,81684690 N,N NA;NA NA VCAN IMR90 Hi-C 24141950 ATP6AP1L 81705 2258 chr5 81715155 81720506 81718641 N NA NA VCAN,ATP6AP1L IMR90 Hi-C 24141950 ATP6AP1L 113989 2259 chr5 81730572 81748882 81731241 N NA NA NA NA NA NA ATP6AP1L 129406 2260 chr5 81814599 81825593 81815363 N NA NA NA NA NA NA ATP6AP1L 213433 2261 chr5 84717288 84749854 84748416 N NA NA NA NA NA NA COX7C 1163930 2262 chr5 84920467 84934737 84934473 N NA NA NA NA NA NA COX7C 979047 2263 chr5 84939634 84945021 84943126 N NA NA NA NA NA NA COX7C 968763 2264 chr5 84959041 84961810 84959381 N NA NA NA NA NA NA COX7C 951974 2265 chr5 85781407 85806671 85802185,85806369 N,N NA;NA NA NA NA NA NA COX7C 107113 2266 chr5 85812486 85813853 85812571 N NA NA NA NA NA NA COX7C 99931 2267 chr5 85850119 85866986 85866529 N NA COX7C COX7C K562 ChIA-PET 22265404 COX7C 46798 2268 chr5 86376571 86378175 86377502 N NA NA RASA1 IMR90 Hi-C 24141950 RASA1 185895 2269 chr5 88219243 88236331 88219829 Y NA NA NA NA NA NA LOC100505894 654544 2270 chr5 88297188 88300771 88298980 N NA NA NA NA NA NA LOC100505894 732489 2271 chr5 89503021 89504451 89504140 N NA NA NA NA NA NA CETN3 201152 2272 chr5 90574969 90578356 90576426 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 97808 2273 chr5 90586268 90612043 90607875,90587801,90610237 N,N,N NA;NA;NA NA ARRDC3,LOC100129716,GPR98 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 64121 2274 chr5 91790199 91793197 91792024 N NA NA FAM172A IMR90 Hi-C 24141950 ARRDC3 1111050 2275 chr5 95042383 95062040 95043000,95047535,95054008 N,N,Y NA;NA;ELL2,RHOBTB3 RHOBTB3 RHOBTB3,SPATA9,ARSK,RFESD,GLRX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RHOBTB3 4810 2276 chr5 95381775 95383186 95382201 N NA NA ELL2 IMR90 Hi-C 24141950 ELL2 84000 2277 chr5 963472 965617 964103 Y NA NA SLC12A7,TRIP13,BRD9,LOC100506688 IMR90 Hi-C 24141950 TRIP13 70503 2278 chr5 99981162 99984924 99983106 N NA NA NA NA NA NA LOC100289230 1716324 2279 chr6 100675959 100678524 100676946 Y NA NA SIM1 IMR90 Hi-C 24141950 ASCC3 650700 2280 chr6 10098320 10103847 10099450,10101780 N,N NA;NA NA LOC100506207 IMR90 Hi-C 24141950 GCNT2 417721 2281 chr6 10346547 10348932 10348158 N NA NA NA NA NA NA GCNT2 172636 2282 chr6 104846164 104850344 104848964,104846783 N,N NA;NA NA NA NA NA NA HACE1 457450 2283 chr6 105118057 105120099 105119065 N NA NA NA NA NA NA HACE1 187695 2284 chr6 105140189 105154470 105153144 N NA NA HACE1 IMR90 Hi-C 24141950 HACE1 153324 2285 chr6 106048233 106050258 106049586 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PREP 197234 2286 chr6 106252845 106254430 106253620 Y PRDM1 NA ATG5,PRDM1 IMR90 Hi-C 24141950 PRDM1 279765 2287 chr6 106255578 106260830 106258770 Y NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PRDM1 273365 2288 chr6 106439107 106441078 106440482 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 93117 2289 chr6 107293471 107298783 107295180,107297464 N,N NA;NA NA LOC100422737 IMR90 Hi-C 24141950 C6orf203 50624 2290 chr6 107305255 107308058 107306837 Y NA C6orf203 NA NA NA NA C6orf203 41349 2291 chr6 108322509 108325955 108324451 Y NA SEC63 NA NA NA NA SEC63 43027 2292 chr6 109056353 109061096 109057422,109059384 N,Y NA;FOXO3 NA FOXO3,LINC00222 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXO3 175327 2293 chr6 109556728 109565375 109558430 N NA NA CD164,CCDC162P K562 ChIA-PET 22265404 CD164 138387 2294 chr6 112229777 112230943 112230236 N NA NA NA NA NA NA TUBE1 177808 2295 chr6 112364109 112365085 112364742 N NA TUBE1 FYN,TRAF3IP2-AS1,TRAF3IP2,REV3L IMR90 Hi-C 24141950 TUBE1 43666 2296 chr6 113006868 113014459 113010292 N NA NA FLJ34503 IMR90 Hi-C 24141950 RFPL4B 338336 2297 chr6 113276323 113301508 113278073 N NA NA FLJ34503,MARCKS,LOC285758 IMR90 Hi-C 24141950 RFPL4B 607791 2298 chr6 11392146 11395196 11393445 Y NEDD9 NA NEDD9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 C6orf228 297880 2299 chr6 11833008 11835014 11834470 N NA NA HIVEP1,ADTRP IMR90 Hi-C 24141950 ADTRP 53728 2300 chr6 11917502 11922945 11921443,11919091 Y,N NA;NA NA HIVEP1,ADTRP K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HIVEP1 89779 2301 chr6 11929868 11935562 11931860 N NA NA ADTRP,HIVEP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIVEP1 77162 2302 chr6 11936740 11946033 11938980,11942521 N,N NA;NA NA ADTRP,HIVEP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIVEP1 66691 2303 chr6 11967864 11969352 11968548 N NA HIVEP1 ADTRP,TMEM170B,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 43372 2304 chr6 119887630 119890023 119888103 N NA NA NA NA NA NA MAN1A1 216704 2305 chr6 119947763 119951414 119949182 N NA NA MAN1A1 K562 ChIA-PET 22265404 MAN1A1 276837 2306 chr6 122597273 122604199 122601999 N NA NA NA NA NA NA HSF2 116497 2307 chr6 125950658 125967745 125965622 N NA NA LOC643623 IMR90 Hi-C 24141950 NCOA7 134562 2308 chr6 126385867 126460318 126386705,126432740 N,N NA;NA NA RSPO3,TRMT11 IMR90 Hi-C 24141950 TRMT11 78291 2309 chr6 134255967 134261892 134261063 N NA TBPL1 HBS1L,TBPL1,SLC2A12 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TBPL1 11416 2310 chr6 134693326 134696252 134694758 N NA NA ALDH8A1,SGK1,LOC154092 IMR90 Hi-C 24141950 TBPL1 420018 2311 chr6 135393682 135396876 135395565 N NA HBS1L HBS1L K562 ChIA-PET 22265404 HBS1L 17646 2312 chr6 135403745 135407768 135405918 N NA HBS1L HBS1L,MYB,AHI1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 HBS1L 27709 2313 chr6 135464714 135470951 135467590,135468913,135470820 N,N,N NA;NA;NA MYB AHI1,MYB,MAP7,HBS1L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYB 31502 2314 chr6 135582344 135584800 135583545 N NA NA NA NA NA NA MYB 79891 2315 chr6 137543964 137546592 137544760 N NA IFNGR1 NA NA NA NA IFNGR1 3397 2316 chr6 138114847 138117163 138115959 N NA NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 71418 2317 chr6 138131458 138134297 138132732 Y TNFAIP3 NA TNFAIP3,PERP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 54284 2318 chr6 138144404 138152266 138145545,138150843 N,Y NA;OLIG3,TNFAIP3 TNFAIP3 TNFAIP3,PERP IMR90 Hi-C 24141950 TNFAIP3 36315 2319 chr6 138172295 138184483 138182879 N NA TNFAIP3 TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 4098 2320 chr6 138229599 138234030 138232159 N NA TNFAIP3 PERP IMR90 Hi-C 24141950 TNFAIP3 41018 2321 chr6 138235143 138237803 138236301 N NA TNFAIP3 PERP IMR90 Hi-C 24141950 TNFAIP3 46562 2322 chr6 138239336 138243224 138241054 N NA NA PERP,TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 50755 2323 chr6 138269777 138280792 138276495,138278945 N,N NA;NA NA TNFAIP3,PERP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 81196 2324 chr6 13872342 13875730 13874254 N NA RNF182 DTNBP1,CCDC90A,CD83 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNF182 48947 2325 chr6 139800237 139802184 139801208 N NA NA CITED2,LOC645434 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CITED2 104452 2326 chr6 139816647 139819914 139818669 N NA NA LOC645434,CITED2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CITED2 120862 2327 chr6 139853839 139857639 139855413 N NA NA LOC100132735,CITED2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CITED2 158054 2328 chr6 139946152 139947333 139946458 N NA NA CITED2 K562 ChIA-PET 22265404 CITED2 250367 2329 chr6 141091566 141104972 141093094 N NA NA NA NA NA NA VTA1 1363438 2330 chr6 14109497 14110661 14110577 N NA CD83 RNF182,CD83 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD83 6826 2331 chr6 141113380 141129653 141118779,141114553 N,N NA;NA NA NA NA NA NA VTA1 1338757 2332 chr6 141131912 141174612 141151235,141138777 N,N NA;NA NA LOC100132735 IMR90 Hi-C 24141950 VTA1 1293798 2333 chr6 141211703 141216015 141214441 N NA NA NA NA NA NA VTA1 1252395 2334 chr6 141216601 141220194 141219020 N NA NA LOC100132735,MIR3668 IMR90 Hi-C 24141950 VTA1 1248216 2335 chr6 14201619 14214584 14211430 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD83 84132 2336 chr6 14448028 14455337 14450035,14453093 N,Y NA;NA NA JARID2 IMR90 Hi-C 24141950 CD83 330541 2337 chr6 144535875 144538849 144537552 Y NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 PLAGL1 150140 2338 chr6 144604757 144607511 144606468 N NA NA UTRN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLAGL1 219022 2339 chr6 14474069 14478797 14477310 N NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 CD83 356582 2340 chr6 14698381 14714600 14704598,14706768,14711612 N,Y,Y NA;NA;NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 531927 2341 chr6 14718279 14737412 14729058,14725066,14735118 Y,Y,Y NA;NA;NA NA JARID2,DTNBP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 509115 2342 chr6 14745585 14783853 14777194,14782131 N,Y NA;JARID2 NA JARID2 IMR90 Hi-C 24141950 JARID2 462674 2343 chr6 147768113 147772153 147769674 N NA NA NA NA NA NA LOC729178 242363 2344 chr6 14786046 14866931 14866009,14797907,14864369 Y,N,N JARID2;NA;NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 379596 2345 chr6 147980856 147993717 147981796 N NA NA SAMD5 IMR90 Hi-C 24141950 LOC729178 455106 2346 chr6 14907127 14952457 14951128 N NA NA JARID2,DTNBP1,CD83 IMR90 Hi-C 24141950 JARID2 294070 2347 chr6 149447649 149451520 149449751 Y ZC3H12D,TAB2 NA ZC3H12D,UST,TAB2,PPIL4 IMR90 Hi-C 24141950 TAB2 187916 2348 chr6 149458933 149463364 149461747 Y ZC3H12D,TAB2,PPIL4 NA NA NA NA NA TAB2 176072 2349 chr6 14961303 15093695 15079732,15033653,15087444,14966894,15037114,15063120,15089693,15091839,15017765,15066977,15020598 N,N,N,Y,N,N,N,N,Y,Y,N NA;NA;NA;NA;NA;NA;NA;NA;JARID2;NA;NA NA CD83,JARID2,DTNBP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 JARID2 152832 2350 chr6 150616883 150620407 150618707 N NA NA PPP1R14C,PLEKHG1 IMR90 Hi-C 24141950 PPP1R14C 152695 2351 chr6 150631013 150633433 150631715 N NA NA PPP1R14C IMR90 Hi-C 24141950 PPP1R14C 166825 2352 chr6 150637316 150641086 150639114 N NA NA PPP1R14C IMR90 Hi-C 24141950 PPP1R14C 173128 2353 chr6 150646582 150675485 150648671 N NA NA PPP1R14C IMR90 Hi-C 24141950 PPP1R14C 182394 2354 chr6 15096510 15099105 15097464 Y NA NA JARID2 IMR90 Hi-C 24141950 JARID2 147422 2355 chr6 15106553 15109228 15107585 Y NA NA JARID2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 JARID2 137299 2356 chr6 151549634 151551735 151550984 N NA NA MTHFD1L,AKAP12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZBTB2 160942 2357 chr6 15210221 15212939 15211312 N NA JARID2 JARID2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 JARID2 33588 2358 chr6 157006641 157010618 157008231 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 88446 2359 chr6 15729611 15731947 15730926 N NA NA MYLIP IMR90 Hi-C 24141950 DTNBP1 66322 2360 chr6 15733459 15737602 15736503 N NA NA MYLIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DTNBP1 70170 2361 chr6 157637796 157639476 157638865 N NA NA NA NA NA NA TMEM242 105777 2362 chr6 158177275 158182251 158178642 Y SNX9 NA SNX9,ZDHHC14,TMEM242,SYNJ2,SERAC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SNX9 62043 2363 chr6 158232012 158233620 158232800 N NA SNX9 SNX9,TMEM242,ZDHHC14,SYNJ2,SERAC1 IMR90 Hi-C 24141950 SNX9 10674 2364 chr6 158644112 158659531 158653130 N NA NA TULP4,SYTL3,DYNLT1,TMEM181 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF2H5 54733 2365 chr6 15893613 15898981 15896167 N NA NA MYLIP K562 ChIA-PET 22265404 DTNBP1 230324 2366 chr6 15900471 15904166 15901859 N NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 225151 2367 chr6 159289128 159292765 159290886 N NA EZR OSTCP1,C6orf99,EZR K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZR 48672 2368 chr6 159358608 159360672 159359515 N NA NA EZR IMR90 Hi-C 24141950 RSPH3 60526 2369 chr6 15992660 16007255 15995140,16002923,16005793 N,N,N NA;NA;NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 122062 2370 chr6 161207560 161212294 161211257 N NA NA NA NA NA NA MAP3K4 200528 2371 chr6 161347361 161358355 161347993 N NA NA PARK2,AGPAT4,MAP3K4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K4 54467 2372 chr6 16214255 16217699 16215936 Y MYLIP GMPR GMPR,DTNBP1,JARID2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GMPR 21112 2373 chr6 16223876 16229335 16225754 N NA GMPR GMPR,JARID2,DTNBP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GMPR 9476 2374 chr6 164197017 164200110 164198450 Y NA NA NA NA NA NA QKI 361342 2375 chr6 164692630 164770837 164758644,164766979,164761472,164767129 N,N,N,N NA;NA;NA;NA NA DKFZp451B082,PACRG,PARK2 IMR90 Hi-C 24141950 QKI 856955 2376 chr6 169574084 169577220 169575235 N NA NA THBS2,WDR27 IMR90 Hi-C 24141950 WDR27 524939 2377 chr6 170914790 170921937 170921446,170915079 N,N NA;NA PDCD2 NA NA NA NA PDCD2 21010 2378 chr6 17729192 17731547 17730335 N NA NUP153 NUP153 K562 ChIA-PET 22265404 NUP153 22374 2379 chr6 18052761 18054729 18053959 N NA NA NHLRC1,KIF13A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIF13A 64907 2380 chr6 19803447 19806653 19805038 N NA NA ID4 MCF7 ChIA-PET 22265404 MBOAT1 406017 2381 chr6 19995295 19997210 19996039 N NA NA NA NA NA NA MBOAT1 215460 2382 chr6 19999190 20000760 20000061 N NA NA NA NA NA NA MBOAT1 211910 2383 chr6 20333705 20335912 20334730 N NA NA MBOAT1,E2F3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 E2F3 66225 2384 chr6 21256197 21260210 21259012 Y NA NA CDKAL1 IMR90 Hi-C 24141950 CDKAL1 721509 2385 chr6 21263461 21266303 21264731 N NA NA NA NA NA NA CDKAL1 728773 2386 chr6 24742976 24744223 24743850 N NA C6orf62,GMNN GMNN,FAM65B,KIAA0319,CMAHP,C6orf62 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C6orf62 23573 2387 chr6 26304144 26307046 26304989 Y NA NA HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 58352 2388 chr6 26310212 26324417 26311652,26319815,26323167 N,N,N NA;NA;NA BTN3A2 HIST1H1D,HIST1H4F,HIST1H2BF,HIST1H3D,HIST1H4E,HIST1H2AE,HIST1H2BG,HIST1H2AH,HIST1H2BK,MIR3143,ABT1,HIST1H4D,HIST1H4G,HIST1H2BH,HIST1H3F,HIST1H4H,HIST1H3G,HIST1H2BI,BTN3A2,BTN3A1,BTN2A3P,BTN2A1,LOC285819,HMGN4,HIST1H4I,HCG11 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 40981 2389 chr6 26326427 26338760 26331657,26327787,26336771 N,N,N NA;NA;NA BTN3A2,BTN2A2 HIST1H1D,HIST1H4F,ABT1,HIST1H4G,HMGN4,HIST1H4I,HIST1H2BK,HIST1H2BH,HIST1H3F,HIST1H4H,BTN3A2,BTN2A2,BTN2A3P,BTN3A1,BTN1A1,HIST1H2AE,HIST1H2BG,HIST1H2AG,HIST1H2BJ,HIST1H2AH,MIR3143,LOC285819,BTN2A1,HCG11,HIST1H4D,HIST1H4E,HIST1H3E,HIST1H3D,HIST1H2BF,HIST1H3G,HIST1H2BI,BTN3A3,HIST1H2BN,HIST1H2AK,HIST1H2AI,HIST1H2BL,HIST1H3H,HIST1H2AJ,HIST1H4J,HIST1H2BM,HIST1H4K,HIST1H2BO,HIST1H3J,HIST1H4L,HIST1H2AM,HIST1H3I IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 26638 2390 chr6 26341937 26343667 26342663 N NA BTN3A2,BTN2A2 HIST1H4F,HIST1H1D,ABT1,HMGN4,HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,BTN2A2,HIST1H2AH,MIR3143,LOC285819,BTN2A1,HCG11,BTN3A3,BTN1A1,HIST1H2BI,HIST1H3G,BTN3A2,BTN2A3P,HIST1H4H,BTN3A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 21731 2391 chr6 26348525 26353221 26351164 N NA BTN3A2,BTN2A2,BTN3A1 HIST1H4F,HIST1H1D,ABT1,HMGN4,HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,BTN2A2,HIST1H2AH,MIR3143,LOC285819,BTN2A1,HCG11,BTN3A3,BTN1A1,HIST1H2BI,HIST1H3G,BTN3A2,BTN2A3P,HIST1H4H,BTN3A1,HIST1H4D,HIST1H3F,HIST1H2BH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 12177 2392 chr6 26568022 26570202 26569195 N NA HCG11,HMGN4,ABT1 BTN2A1,LOC285819,HIST1H2AE,HIST1H2BG,ABT1,HCG11,HIST1H2BD,HIST1H1E,HMGN4,HIST1H2BF,HIST1H3D K562 ChIA-PET 22265404 ABT1 26969 2393 chr6 26570802 26574577 26572210 N NA HCG11,HMGN4,ABT1 BTN2A1,LOC285819,ABT1,HIST1H2AE,HIST1H2BG,HCG11,HIST1H2BD,HIST1H1E,HMGN4,HIST1H2BF,HIST1H3D,HIST1H4E,HIST1H2BK,HIST1H4I K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ABT1 22594 2394 chr6 26576621 26578384 26577592 N NA HMGN4,ABT1 ABT1,HIST1H2BK,HIST1H4I,HIST1H2BG,HIST1H2AE,HCG11,HMGN4 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ABT1 18787 2395 chr6 27140484 27142277 27141369 N NA HIST1H2BK NA NA NA NA HIST1H2BK 25847 2396 chr6 27143903 27147240 27144910 N NA HIST1H2BK HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HIST1H2BK 29266 2397 chr6 27154806 27169763 27155861 N NA HIST1H2BK,PRSS16 HIST1H2BO,HIST1H2AM,OR2B2,LOC100507173,HIST1H4J,HIST1H3J,HIST1H2BK,MIR3143,HIST1H2AH,HIST1H2AI,HIST1H3H,HIST1H2BL,ZNF184,LOC100131289,PRSS16,ZNF391,HIST1H4K,HIST1H2BM,HIST1H2AJ IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HIST1H2BK 40169 2398 chr6 27173150 27176759 27173948 N NA PRSS16 LOC100507173,HIST1H4J,ZNF184,OR2B2,HIST1H2AH,MIR3143,HIST1H2BK,PRSS16,ZNF391 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PRSS16 38743 2399 chr6 27180913 27182147 27181349 N NA PRSS16 ZNF184,OR2B2,PRSS16 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PRSS16 33355 2400 chr6 27246767 27249245 27247735 N NA PRSS16 LOC100507173 IMR90 Hi-C 24141950 PRSS16 31265 2401 chr6 27445402 27448617 27446965 Y NA ZNF184 ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF184 4505 2402 chr6 27462442 27464903 27463539 N NA ZNF184 HIST1H2BK,HIST1H4I,ABT1,PRSS16 IMR90 Hi-C 24141950 ZNF184 21545 2403 chr6 27472280 27488251 27473561,27487276 N,N NA;NA ZNF184 HIST1H2BK,HIST1H4I,PRSS16,ZNF184,HIST1H2BO,HIST1H3J,HIST1H2AM,HIST1H2AH,MIR3143,LOC100131289,HIST1H2BJ,HIST1H2AG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF184 31383 2404 chr6 27492278 27498068 27496501 N NA NA PRSS16 IMR90 Hi-C 24141950 ZNF184 51381 2405 chr6 27511514 27514409 27513488 Y NA NA HIST1H2AH,HIST1H2BK,MIR3143,HIST1H2AM,HIST1H3J,HIST1H2BO,HIST1H2BL,HIST1H3H,HIST1H2AI,ZNF391,ZNF184 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF184 70617 2406 chr6 27519741 27522656 27520886 N NA NA HIST1H2BO,HIST1H2AM,HIST1H2AI,HIST1H3H,HIST1H2BL,ZNF184,HIST1H2BJ,HIST1H2AG K562 ChIA-PET 22265404 ZNF184 78844 2407 chr6 27569260 27571484 27570492 N NA NA PRSS16 IMR90 Hi-C 24141950 LOC100507173 90330 2408 chr6 27572330 27575022 27573178 N NA NA PRSS16,LOC100507173 IMR90 Hi-C 24141950 LOC100507173 86792 2409 chr6 27583454 27587097 27585939,27584263 Y,N NA;NA NA NA NA NA NA LOC100507173 74717 2410 chr6 27598240 27600299 27599196 N NA NA NA NA NA NA LOC100507173 61515 2411 chr6 27638908 27641780 27640314 Y NA LOC100507173 ZNF391,PRSS16 IMR90 Hi-C 24141950 LOC100507173 20034 2412 chr6 27651714 27652686 27652556 N NA LOC100507173 HIST1H3H,HIST1H2BL,LOC100507173,ZNF184 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100507173 9128 2413 chr6 27654420 27657255 27656094 N NA LOC100507173 LOC100507173,ZNF184 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 LOC100507173 4559 2414 chr6 27720047 27721650 27721138 N NA LOC100131289 HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2BJ,HIST1H2AH,MIR3143,LOC100131289,POM121L2,ZNF184,LOC100507173,HIST1H2AM,HIST1H2BO,HIST1H3I,HIST1H4L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100131289 7873 2415 chr6 28414497 28415593 28415061 Y NA ZSCAN12 NA NA NA NA ZSCAN12 46953 2416 chr6 28441094 28443125 28442213 N NA NA GPX6,ZSCAN16 IMR90 Hi-C 24141950 ZSCAN12 73550 2417 chr6 28565975 28591694 28574923,28584116,28589110,28580924 N,N,N,N NA;NA;NA;NA SCAND3 SCAND3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SCAND3 10863 2418 chr6 28594831 28620798 28595471,28611291,28616025 N,N,N NA;NA;NA SCAND3 SCAND3,ZSCAN12 IMR90 Hi-C 24141950 SCAND3 39719 2419 chr6 28624925 28645355 28626029,28643414 N,N NA;NA NA ZSCAN12 IMR90 Hi-C 24141950 SCAND3 69813 2420 chr6 28656878 28679822 28677669 N NA NA C16orf42,GNPTG,ZNF311 MCF7,IMR90 ChIA-PET,Hi-C 19890323,24141950 SCAND3 101766 2421 chr6 28694444 28698322 28694973,28697080 N,N NA;NA NA ZNF311 IMR90 Hi-C 24141950 SCAND3 139332 2422 chr6 28703962 28707389 28706083 N NA NA NA NA NA NA SCAND3 148850 2423 chr6 28709553 28728807 28710698,28722588,28715835,28713693,28725139 N,N,N,N,N NA;NA;NA;NA;NA NA NA NA NA NA SCAND3 154441 2424 chr6 28730543 28738069 28731920,28737704 N,N NA;NA NA NA NA NA NA TRIM27 153699 2425 chr6 28739121 28747421 28740088,28744494 N,N NA;NA NA NA NA NA NA TRIM27 144347 2426 chr6 28747997 28750538 28749638 N NA NA NA NA NA NA TRIM27 141230 2427 chr6 28758335 28759534 28758718 N NA NA NA NA NA NA TRIM27 132234 2428 chr6 28770088 28772469 28770702 N NA NA NA NA NA NA TRIM27 119299 2429 chr6 28775043 28779006 28775700 N NA NA NA NA NA NA TRIM27 112762 2430 chr6 28780711 28786312 28785106,28782167 N,Y NA;ZSCAN12,GPX6,SCAND3,OR2J3,OR14J1,OR2W1,OR2B3,TRIM27 NA NA NA NA NA TRIM27 105456 2431 chr6 28841963 28843443 28842602 N NA TRIM27 LOC401242 MCF7 ChIA-PET 22265404 TRIM27 48325 2432 chr6 28847980 28849758 28849024 N NA TRIM27 TRIM27 IMR90 Hi-C 24141950 TRIM27 42010 2433 chr6 28908223 28910033 28909136 N NA TRIM27 TRIM27,LOC401242,ZNF311 IMR90 Hi-C 24141950 TRIM27 16455 2434 chr6 28919882 28925059 28920981,28923999 N,N NA;NA TRIM27,ZNF311 ZNF311,TRIM27 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TRIM27 28114 2435 chr6 28927185 28929993 28928968 N NA TRIM27,ZNF311 TRIM27 K562 ChIA-PET 22265404 TRIM27 35417 2436 chr6 28978501 28980274 28979327 N NA ZNF311 NA NA NA NA ZNF311 5464 2437 chr6 28983063 28985411 28984436 N NA ZNF311 TRIM27,LOC401242 MCF7,K562 ChIA-PET 22265404 ZNF311 10026 2438 chr6 2920365 2922408 2921167 Y NA MGC39372,SERPINB9,SERPINB6 SERPINB1,MGC39372,SERPINB9,DKFZP686I15217,SERPINB6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERPINB9 16820 2439 chr6 2978458 2982488 2980574 Y SERPINB1,RIPK1,SERPINB9 SERPINB6,DKFZP686I15217,NQO2 WRNIP1,MYLK4,MIR4645,MGC39372,SERPINB1,DKFZP686I15217,SERPINB6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DKFZP686I15217 5713 2440 chr6 30482515 30486324 30484277 N NA HLA-E,PRR3,GNL1 HLA-E,PPP1R10,MRPS18B,ABCF1,PRR3,GNL1 MCF7,K562 ChIA-PET 22265404 HLA-E 25332 2441 chr6 3050551 3060556 3054066 N NA RIPK1 MYLK4,WRNIP1,DKFZP686I15217,NQO2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RIPK1 16502 2442 chr6 3062947 3068441 3064087 N NA RIPK1 NQO2,LOC100507194,WRNIP1 K562 ChIA-PET 22265404 RIPK1 8617 2443 chr6 30731306 30733640 30731869 Y NA MDC1,TUBB,FLOT1,IER3 DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A IMR90 Hi-C 24141950 IER3 18979 2444 chr6 30735649 30739235 30737403 N NA TUBB,FLOT1,IER3 DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A,MRPS18B,PPP1R10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IER3 23322 2445 chr6 30745874 30749272 30746958 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,ABCF1,PPP1R10,KIAA1949,KIAA1949,HLA-C,FLOT1,IER3 FLOT1,IER3 CCHCR1,PSORS1C1,PSORS1C2,FLOT1,PRRC2A,C6orf15,MUC22,DHX16,PPP1R18,TUBB,MDC1,IER3,DDR1,CDSN,NRM,MRPS18B,PPP1R10 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER3 33547 2446 chr6 30752435 30764811 30753957 N NA FLOT1,IER3 FLOT1,C6orf15,PSORS1C1,DHX16,PPP1R18,TUBB,NRM,IER3,MDC1,DDR1,DPCR1,SFTA2,VARS2,C6orf136,GTF2H4,MUC22,PSORS1C3,TCF19,POU5F1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IER3 40108 2447 chr6 30779907 30788996 30782404,30786417,30788172 N,Y,Y NA;TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,FLOT1,IER3;TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,IER3 NA FLOT1,C6orf15,PSORS1C1,TUBB,DDR1,VARS2,DHX16,SFTA2,PPP1R18,NRM,IER3,MUC22 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDR1 62865 2448 chr6 30794493 30798030 30795610 N NA NA FLOT1,TUBB,VARS2,DHX16,IER3,DDR1,DPCR1,SFTA2,GTF2H4,C6orf136,C6orf15,PSORS1C1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDR1 53831 2449 chr6 30838949 30846916 30840916,30844530 Y,N ABCF1,C6orf136;NA DDR1,GTF2H4,VARS2 DHX16,VARS2,DPCR1,DDR1,MUC22,CCHCR1,MDC1,PPP1R18,NRM,TUBB,IER3,FLOT1,SFTA2,PSORS1C1,C6orf15,PSORS1C2 IMR90 Hi-C 24141950 DDR1 4945 2450 chr6 32222020 32224493 32223124 N NA NA C6orf10,HCG23,NOTCH4,BTNL2,ATF6B,AGER,PBX2,TNXB IMR90 Hi-C 24141950 PBX2 64057 2451 chr6 33330941 33334090 33332798 N NA TAPBP,ZBTB22,DAXX,KIFC1,PHF1 KIFC1,DAXX,WDR46,TAPBP,PFDN6,RGL2,ZBTB22,PHF1,SYNGAP1,ZBTB9 IMR90 Hi-C 24141950 KIFC1 25223 2452 chr6 33342356 33345287 33343836 N NA KIFC1,PHF1,CUTA,SYNGAP1 KIFC1,DAXX,WDR46,TAPBP,PFDN6,RGL2,ZBTB22,PHF1,SYNGAP1,ZBTB9 IMR90 Hi-C 24141950 KIFC1 14026 2453 chr6 33791810 33793449 33792397 Y CUTA,C6orf1 LEMD2 IP6K3,GRM4,RPS10-NUDT3,C6orf106,LEMD2,LOC100507584,MIR1275 IMR90 Hi-C 24141950 LEMD2 34904 2454 chr6 33806025 33821007 33807980,33811668 N,N NA;NA LEMD2 LEMD2,GRM4,MLN,IP6K3,LOC100507584,MIR1275,GGNBP1,LINC00336,BAK1,ITPR3,MNF1,NUDT3,RPS10-NUDT3,PACSIN1 IMR90 Hi-C 24141950 LEMD2 49119 2455 chr6 34163029 34166163 34164288 N NA HMGA1 PACSIN1,C6orf106,SPDEF,NUDT3,RPS10-NUDT3,UHRF1BP1,ANKS1A,TAF11,SNRPC,HMGA1,C6orf1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HMGA1 38414 2456 chr6 34190168 34193439 34191825 Y C6orf1,HMGA1 HMGA1,C6orf1 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 HMGA1 11138 2457 chr6 34526701 34530246 34528493 N NA NA PACSIN1 K562 ChIA-PET 22265404 RPS10-NUDT3 132799 2458 chr6 3642278 3652842 3651417 N NA NA SLC22A23,TUBB2B,PXDC1,BPHL IMR90 Hi-C 24141950 SLC22A23 185485 2459 chr6 37044136 37053283 37051489 Y SRSF3,CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FGD2 NA PPIL1,C6orf89,CPNE5,FGD2,PIM1,TBC1D22B,TMEM217,MTCH1 IMR90 Hi-C 24141950 PIM1 84639 2460 chr6 37068102 37072929 37070906 N NA NA PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 64993 2461 chr6 37075848 37079497 37077777,37079280 Y,N C6orf89,TBC1D22B,PIM1;NA NA PIM1,PPIL1,TMEM217,CPNE5,FGD2,C6orf89,TBC1D22B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PIM1 58425 2462 chr6 37091970 37097929 37096523,37093620 N,Y NA;NA PIM1 PIM1,PPIL1,FGD2,C6orf89,TMEM217,CPNE5,MTCH1,TBC1D22B,CDKN1A,MIR3925 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 39993 2463 chr6 37103151 37107004 37105681 N NA PIM1 PIM1,CPNE5,TMEM217,PPIL1,MIR3925,C6orf89,FGD2,TBC1D22B,MTCH1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 30918 2464 chr6 37672254 37674340 37673543 N NA NA MDGA1 K562,MCF7 ChIA-PET 22265404 ZFAND3 112967 2465 chr6 37678574 37680107 37679245 N NA NA NA NA NA NA ZFAND3 107200 2466 chr6 37680656 37682488 37681669 N NA NA FTSJD2,CCDC167,MIR4462,MDGA1,BTBD9,ZFAND3 IMR90 Hi-C 24141950 ZFAND3 104819 2467 chr6 39917046 39931771 39918232 N NA MOCS1 KIF6,LRFN2,TDRG1,MOCS1,DAAM2 IMR90 Hi-C 24141950 MOCS1 14756 2468 chr6 39959793 39962930 39961235 N NA NA KIF6,FLJ41649,LRFN2 IMR90 Hi-C 24141950 MOCS1 57503 2469 chr6 39964863 39968687 39967033 N NA NA KIF6 IMR90 Hi-C 24141950 MOCS1 62573 2470 chr6 40102667 40104567 40103605 N NA NA KIF6 IMR90 Hi-C 24141950 MOCS1 200377 2471 chr6 40105393 40107568 40106916 N NA NA NA NA NA NA MOCS1 203103 2472 chr6 40128517 40134673 40132336 Y NA NA KIF6 IMR90 Hi-C 24141950 MOCS1 226227 2473 chr6 40682304 40684796 40683659 N NA NA APOBEC2 IMR90 Hi-C 24141950 UNC5CL 322142 2474 chr6 40686456 40688217 40687366 N NA NA APOBEC2 IMR90 Hi-C 24141950 UNC5CL 318721 2475 chr6 41285796 41287997 41286751 Y NFYA,TFEB,TREML4,TREM1 NA C6orf130 K562 ChIA-PET 22265404 TREML2 116871 2476 chr6 42746643 42765325 42750798 N NA TBCC,KIAA0240 KIAA0240,UBR2,RPL7L1,PTCRA,KLHDC3,MEA1,PPP2R5D,PRPH2,TBCC,ATP6V0CP3,C6orf226,TRERF1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0240 23469 2477 chr6 4322332 4324711 4323286 N NA NA CDYL IMR90 Hi-C 24141950 ECI2 186501 2478 chr6 4336500 4337892 4337191 N NA NA CDYL,RPP40 IMR90 Hi-C 24141950 ECI2 200669 2479 chr6 4346544 4373181 4371892,4352211,4355727,4359147 N,Y,Y,Y NA;CDYL;NA;CDYL NA CDYL,RPP40 IMR90 Hi-C 24141950 ECI2 210713 2480 chr6 43669575 43671953 43670679 N NA MRPS18A MRPS18A,RSPH9,XPO5,LOC100132354,C6orf223,MRPL14,TMEM63B,CAPN11,VEGFA,MAD2L1BP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPS18A 14026 2481 chr6 43691210 43694198 43692978 Y TJAP1,MAD2L1BP MRPS18A,VEGFA MRPS18A,LOC100132354,RSPH9,MRPL14,CAPN11,TMEM63B,POLH,VEGFA,XPO5,MAD2L1BP,GTPBP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPS18A 35661 2482 chr6 4376221 4384847 4378741,4382759 N,N NA;NA NA CDYL,RPP40 IMR90 Hi-C 24141950 ECI2 240390 2483 chr6 43805189 43807175 43806521 N NA NA VEGFA,RSPH9,MRPS18A,LOC100132354,C6orf223 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100132354 51590 2484 chr6 43809885 43811894 43811095 N NA LOC100132354 VEGFA,LOC100132354,RSPH9,GTPBP2,POLH,MAD2L1BP,MRPS18A,C6orf223,MRPL14,TMEM63B IMR90 Hi-C 24141950 LOC100132354 46871 2485 chr6 43931780 43934621 43933198 N NA C6orf223 VEGFA,MRPS18A,LOC100132354 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 C6orf223 33716 2486 chr6 44174083 44176133 44174836 N NA SLC29A1,HSP90AB1,SLC35B2 SLC29A1 IMR90 Hi-C 24141950 SLC29A1 11109 2487 chr6 44438592 44442145 44439718 N NA NA NA NA NA NA CDC5L 83341 2488 chr6 4620199 4622200 4620928 N NA NA CDYL IMR90 Hi-C 24141950 CDYL 84193 2489 chr6 4646628 4648718 4648090 N NA NA CDYL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDYL 57675 2490 chr6 4686716 4689811 4688435 Y NA CDYL CDYL,FAM217A,C6orf201,ECI2 IMR90 Hi-C 24141950 CDYL 16582 2491 chr6 47100925 47104107 47102607 Y NA NA TNFRSF21 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD2AP 341418 2492 chr6 47381537 47383631 47382891 N NA NA CD2AP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD2AP 61894 2493 chr6 47384562 47390977 47388369 N NA NA CD2AP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CD2AP 54548 2494 chr6 49612182 49616532 49614214,49615789 Y,N CENPQ,RHAG;NA RHAG RHAG,CRISP3 K562 ChIA-PET 22265404 RHAG 7595 2495 chr6 49629766 49631053 49630414 N NA RHAG NA NA NA NA RHAG 25179 2496 chr6 5047508 5052996 5049790 N NA RPP40,PPP1R3G RPP40,FARS2 IMR90 Hi-C 24141950 PPP1R3G 32724 2497 chr6 50929085 50931868 50930327 N NA NA NA NA NA NA DEFB133 1011928 2498 chr6 50957724 50960543 50958937 N NA NA NA NA NA NA DEFB133 1040567 2499 chr6 50962247 50964047 50962966 N NA NA NA NA NA NA DEFB133 1045090 2500 chr6 50991796 50994573 50992718 N NA NA NA NA NA NA DEFB133 1074639 2501 chr6 51015965 51021899 51018082,51020656 N,N NA;NA NA NA NA NA NA DEFB133 1098808 2502 chr6 51088569 51091293 51089354 N NA NA NA NA NA NA MCM3 1058289 2503 chr6 52167913 52170337 52168955 N NA MCM3 PAQR8,MCM3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MCM3 18331 2504 chr6 52216565 52218379 52217385 Y NA PAQR8 PAQR8,MCM3,EFHC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PAQR8 8547 2505 chr6 52461828 52463908 52463160 Y NA TRAM2 EFHC1,TRAM2,MCM3,ICK,LOC730101 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TRAM2 19966 2506 chr6 52484677 52486454 52484950 N NA TRAM2,LOC730101 EFHC1,LOC730101,PAQR8,TRAM2 IMR90 Hi-C 24141950 LOC730101 42745 2507 chr6 53222305 53226731 53224295,53225542 Y,Y NA;NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 8328 2508 chr6 53437563 53439017 53438342 N NA GCLC GCLC,KLHL31 IMR90 Hi-C 24141950 GCLC 27636 2509 chr6 53479154 53483100 53480751 N NA NA GCLC,KLHL31 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 GCLC 69227 2510 chr6 5892025 5896279 5892626 N NA NA NA NA NA NA FARS2 630441 2511 chr6 64150614 64152662 64151744 Y NA NA NA NA NA NA PTP4A1 129258 2512 chr6 6676020 6696713 6678692,6687394,6695385 Y,Y,N NA;NA;NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 411117 2513 chr6 6710305 6714718 6712990 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 393112 2514 chr6 6735861 6738783 6737582 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 369047 2515 chr6 6744302 6751585 6750369 Y LY86,RREB1,RREB1 NA RREB1,SSR1,RIOK1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RREB1 356245 2516 chr6 67773401 67788222 67774188 N NA NA NA NA NA NA LMBRD1 2718827 2517 chr6 68071152 68075011 68073428 N NA NA NA NA NA NA LMBRD1 2432038 2518 chr6 6850056 6853609 6851530 Y NA NA RREB1 IMR90 Hi-C 24141950 RREB1 254221 2519 chr6 68587652 68610609 68595144,68608886,68606435 N,N,N NA;NA;NA NA NA NA NA NA LMBRD1 1896440 2520 chr6 68747390 68794486 68749853,68756302 N,N NA;NA NA NA NA NA NA LMBRD1 1712563 2521 chr6 6884584 6887875 6886332 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 219955 2522 chr6 6889654 6891171 6890462 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 216659 2523 chr6 6927516 6929331 6928259 Y RREB1,RREB1 NA NA NA NA NA RREB1 178499 2524 chr6 7040878 7043707 7041899 Y NA NA RREB1 IMR90 Hi-C 24141950 RREB1 64123 2525 chr6 7057204 7060143 7058812 Y DSP RREB1 RREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RREB1 47687 2526 chr6 71097915 71099931 71098719 N NA FAM135A FAM135A IMR90 Hi-C 24141950 FAM135A 23176 2527 chr6 73242684 73272145 73269871,73270997 N,N NA;NA NA KCNQ5,KHDC1L,RIMS1,MIR4282 IMR90 Hi-C 24141950 KHDC1 747793 2528 chr6 74097566 74100208 74098841 N NA NA MTO1 K562 ChIA-PET 22265404 MTO1 71246 2529 chr6 74273720 74275811 74274687 N NA EEF1A1 MTO1,EEF1A1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EEF1A1 42965 2530 chr6 7688792 7693740 7692578 Y NA NA TXNDC5,MUTED-TXNDC5,PIP5K1P1,BMP6,EEF1E1-MUTED,SSR1 IMR90 Hi-C 24141950 SNRNP48 98360 2531 chr6 7695374 7705966 7698556,7701800 N,Y NA;NA NA PIP5K1P1,MUTED-TXNDC5,BMP6,TXNDC5,EEF1E1-MUTED,SSR1 IMR90 Hi-C 24141950 SNRNP48 104942 2532 chr6 780509 782921 781586 N NA NA EXOC2,FOXF2,LOC285768 IMR90 Hi-C 24141950 EXOC2 87400 2533 chr6 80487446 80488344 80487893 Y NA NA NA NA NA NA SH3BGRL2 146446 2534 chr6 82633802 82649998 82648234 Y NA NA FAM46A IMR90 Hi-C 24141950 FAM46A 171374 2535 chr6 84978407 84981601 84979959 N NA KIAA1009 NA NA NA NA KIAA1009 41072 2536 chr6 85479567 85488212 85484092 N NA TBX18 TBX18 IMR90 Hi-C 24141950 TBX18 5668 2537 chr6 87391122 87397203 87393253 N NA NA NA NA NA NA ZNF292 468066 2538 chr6 88431379 88435903 88433157 Y AKIRIN2 AKIRIN2 AKIRIN2-AS1,AKIRIN2 K562,MCF7 ChIA-PET 22265404 AKIRIN2 19394 2539 chr6 88436858 88444227 88437919,88441705 N,Y NA;AKIRIN2 AKIRIN2 AKIRIN2,AKIRIN2-AS1 K562,MCF7 ChIA-PET 22265404 AKIRIN2 24873 2540 chr6 88450528 88452662 88452077 Y AKIRIN2 AKIRIN2 ORC3,RARS2 IMR90 Hi-C 24141950 AKIRIN2 38543 2541 chr6 88464979 88467484 88466300 N NA NA RNGTT,AKIRIN2,ORC3 IMR90 Hi-C 24141950 AKIRIN2 52994 2542 chr6 88911007 88925114 88924959 N NA NA NA NA NA NA AKIRIN2 499022 2543 chr6 89121844 89133037 89130693 N NA NA NA NA NA NA RNGTT 540311 2544 chr6 89719022 89720436 89719699 N NA RNGTT GABRR2 IMR90 Hi-C 24141950 RNGTT 45674 2545 chr6 89744096 89746384 89745538 Y UBE2J1,PNRC1 PNRC1 PNRC1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PNRC1 44045 2546 chr6 89781193 89784043 89783311 N NA PNRC1 NA NA NA NA PNRC1 6386 2547 chr6 91077821 91080144 91079317 N NA NA BACH2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAP3K7 216763 2548 chr6 91111211 91114370 91113487 N NA NA BACH2,CALN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 MAP3K7 182537 2549 chr6 91115020 91117506 91116279 N NA NA BACH2,CALN1,GJA10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 MAP3K7 179401 2550 chr6 91166178 91170645 91168299 Y NA NA BACH2,CASP8AP2,MDN1,GJA10 IMR90 Hi-C 24141950 MAP3K7 126262 2551 chr6 91175357 91177502 91176503 N NA NA BACH2,MDN1,CASP8AP2,GJA10 IMR90 Hi-C 24141950 MAP3K7 119405 2552 chr6 91187615 91189024 91188127 N NA NA BACH2,GJA10,CASP8AP2,MDN1 IMR90 Hi-C 24141950 MAP3K7 107883 2553 chr6 91320128 91321878 91320981 Y MAP3K7,MAP3K7 MAP3K7 NA NA NA NA MAP3K7 23221 2554 chr6 91762597 91764416 91762936 N NA NA NA NA NA NA MAP3K7 465690 2555 chr6 95965695 95969742 95967307 N NA NA NA NA NA NA MANEA 55631 2556 chr7 100130069 100132463 100130783 N NA AGFG2,SAP25 AGFG2 K562 ChIA-PET 22265404 AGFG2 4371 2557 chr7 100431393 100439123 100433390,100438635 N,N NA;NA EPHB4,SLC12A9,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHB4 6250 2558 chr7 100994707 100996566 100995674 N NA RABL5 EMID2,CUX1 IMR90 Hi-C 24141950 RABL5 29614 2559 chr7 101360745 101362663 101361734 Y CUX1,CUX1 NA CUX1,EMID2,SH2B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 96521 2560 chr7 101369886 101374107 101372840 Y NA NA CUX1,EMID2,SH2B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 85077 2561 chr7 101375633 101378334 101377328 Y NA NA CUX1,EMID2,SH2B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 80850 2562 chr7 101385220 101394809 101386605 N NA NA CUX1,EMID2,SH2B2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 64375 2563 chr7 102331109 102334772 102331569 N NA NA FBXL13,ARMC10 IMR90 Hi-C 24141950 POLR2J 211728 2564 chr7 104582971 104586984 104585680,104584100 Y,N MLL5;NA LOC100216546 LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100216546 44628 2565 chr7 105041401 105043058 105042303 N NA SRPK2 SRPK2,PUS7,MLL5 IMR90 Hi-C 24141950 SRPK2 12060 2566 chr7 105855508 105858716 105857043 Y NA NA NAMPT,CCDC71L IMR90 Hi-C 24141950 NAMPT 66922 2567 chr7 105984078 105989010 105986744 N NA NA NAMPT,CCDC71L,PIK3CG K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 NAMPT 58440 2568 chr7 106059641 106068862 106063517,106065744 N,Y NA;NA NA NAMPT,CCDC71L,CDHR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAMPT 134003 2569 chr7 106087960 106091412 106089844 Y NAMPT,PIK3CG NA NAMPT IMR90 Hi-C 24141950 NAMPT 162322 2570 chr7 106141541 106143634 106142772 N NA NA NAMPT,CCDC71L IMR90 Hi-C 24141950 CCDC71L 158000 2571 chr7 106172468 106185204 106175022,106183197 N,N NA;NA NA CCDC71L,NAMPT IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC71L 116430 2572 chr7 106191437 106240138 106203452,106203343,106193766,106209723,106239355,106225621 N,N,N,N,N,N NA;NA;NA;NA;NA;NA NA CCDC71L,NAMPT,PRKAR2B,ATXN7L1,PIK3CG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC71L 61496 2573 chr7 106397038 106398618 106397563 N NA NA CCDC71L,NAMPT,PIK3CG,PRKAR2B,HBP1 IMR90 Hi-C 24141950 CCDC71L 95404 2574 chr7 106412853 106442844 106415873,106437463 N,N NA;NA NA CCDC71L,HBP1,NAMPT,CBLL1,PIK3CG,PRKAR2B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PIK3CG 63080 2575 chr7 106591048 106594927 106593395 N NA NA HBP1,PRKAR2B,PIK3CG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PIK3CG 85124 2576 chr7 106617850 106621171 106619813 N NA NA PRKAR2B,PIK3CG,CCDC71L,HBP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PRKAR2B 64007 2577 chr7 106624865 106652277 106626486,106630259,106650732,106648022 N,N,N,N NA;NA;NA;NA PRKAR2B PRKAR2B,CCDC71L,HBP1,PIK3CG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PRKAR2B 32901 2578 chr7 106657536 106659913 106658603 N NA PRKAR2B PIK3CG,PRKAR2B IMR90 Hi-C 24141950 PRKAR2B 25265 2579 chr7 106664026 106667447 106666083 N NA PRKAR2B PIK3CG,PRKAR2B IMR90 Hi-C 24141950 PRKAR2B 17731 2580 chr7 106671918 106673811 106673165 N NA PRKAR2B PRKAR2B IMR90 Hi-C 24141950 PRKAR2B 11367 2581 chr7 10748931 10829947 10819663,10828986,10826325,10823738 N,N,N,N NA;NA;NA;NA NA NA NA NA NA NDUFA4 149866 2582 chr7 112731930 112733876 112732915 N NA GPR85,LOC401397 NA NA NA NA GPR85 4097 2583 chr7 112780695 112783817 112782764 N NA LOC401397 NA NA NA NA LOC401397 22058 2584 chr7 112902981 112905982 112903578 N NA NA NA NA NA NA LOC401397 144344 2585 chr7 113222958 113235794 113233465 N NA NA NA NA NA NA LOC401397 464321 2586 chr7 116062910 116067803 116066766 N NA NA CAV2,TES,MET,CAV1 IMR90,HELA,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 CAV2 71852 2587 chr7 116270532 116272262 116271181 Y NA NA TES,MET,CAV1,CAPZA2 IMR90,GM12878,H1ESC,HELA Hi-C,5C 24141950,22955621 CAV2 130877 2588 chr7 116483894 116484843 116484681 N NA CAPZA2 MET,TES IMR90 Hi-C 24141950 CAPZA2 17720 2589 chr7 119496747 119548753 119547241 N NA NA NA NA NA NA ING3 1042064 2590 chr7 119573303 119590270 119588504 N NA NA KCND2 IMR90 Hi-C 24141950 ING3 1000547 2591 chr7 119604306 119606250 119605160 N NA NA NA NA NA NA ING3 984567 2592 chr7 121077116 121082433 121078691,121081166 N,N NA;NA FAM3C FAM3C K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM3C 40694 2593 chr7 123428855 123430980 123430267 N NA WASL WASL K562,MCF7 ChIA-PET 22265404 WASL 39739 2594 chr7 123635124 123637687 123636069 N NA NA NA NA NA NA WASL 246008 2595 chr7 125200888 125226799 125201762,125204227,125207868 N,N,N NA;NA;NA NA NA NA NA NA POT1 630851 2596 chr7 12574627 12577465 12575145 N NA SCIN NA NA NA NA SCIN 32738 2597 chr7 126979905 126988909 126987937 N NA ZNF800 ZNF800 K562,MCF7 ChIA-PET 22265404 ZNF800 43858 2598 chr7 12752473 12770807 12755383,12762544,12769002,12754428 Y,N,N,N VWDE,ARL4A;NA;NA;NA ARL4A ARL4A K562 ChIA-PET 22265404 ARL4A 26021 2599 chr7 12777109 12790565 12778613,12781981,12787414 N,N,N NA;NA;NA NA ARL4A,DGKB K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARL4A 50657 2600 chr7 127843895 127845863 127844715 N NA NA SND1,MIR129-1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MGC27345 101953 2601 chr7 128077428 128078844 128077952 N NA IMPDH1,HILPDA,METTL2B RBM28,IMPDH1,METTL2B,CALU,PRRT4,HILPDA IMR90 Hi-C 24141950 HILPDA 17040 2602 chr7 12844871 12846335 12845834 N NA NA NA NA NA NA ARL4A 118419 2603 chr7 134046945 134051814 134047736,134050594 N,N NA;NA SLC35B4 LRGUK,SLC35B4,EXOC4 IMR90 Hi-C 24141950 SLC35B4 45118 2604 chr7 134150798 134157217 134155235 N NA NA AKR1B1,AKR1B10,AKR1B15 IMR90 Hi-C 24141950 SLC35B4 148971 2605 chr7 135674651 135680199 135675295 N NA MTPN C7orf73 IMR90 Hi-C 24141950 MTPN 12447 2606 chr7 135717266 135728143 135718368 Y NA NA C7orf73 IMR90 Hi-C 24141950 MTPN 55062 2607 chr7 135770594 135779591 135771718,135777587 Y,N NA;NA NA NA NA NA NA MTPN 108390 2608 chr7 135792108 135874005 135792317 N NA NA NA NA NA NA MTPN 129904 2609 chr7 135929338 135944939 135930233,135932391 N,N NA;NA NA NA NA NA NA MTPN 267134 2610 chr7 136008454 136047174 136009288 N NA NA NA NA NA NA MTPN 346250 2611 chr7 137830664 137833715 137832192 N NA NA NA NA NA NA CREB3L2 143817 2612 chr7 137941444 137955324 137942618 Y TRIM24 NA NA NA NA NA TRIM24 189755 2613 chr7 138034177 138039690 138036116,138037576,138038951 N,N,N NA;NA;NA NA TRIM24 K562 ChIA-PET 22265404 TRIM24 105389 2614 chr7 138801513 138808034 138803547 N NA ZC3HAV1,TTC26 KIAA1549,ZC3HAV1L,ZC3HAV1,TTC26,LUC7L2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZC3HAV1 7048 2615 chr7 139930187 139932118 139930966 Y TBXAS1,JHDM1D NA LOC100134229,JHDM1D MCF7 ChIA-PET 22265404 LOC100134229 53126 2616 chr7 139940718 139947682 139942034 N NA NA LOC100134229,JHDM1D,TBXAS1,PARP12,SLC37A3 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 LOC100134229 63657 2617 chr7 139966950 139968175 139967555 N NA NA PARP12,LOC100134229,JHDM1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100134229 89889 2618 chr7 140187240 140189882 140188288 Y NA MKRN1 NA NA NA NA MKRN1 7871 2619 chr7 14040772 14077246 14042925,14045038 Y,N NA;NA ETV1 NA NA NA NA ETV1 9722 2620 chr7 142003 150875 149192 N NA NA FAM20C IMR90 Hi-C 24141950 PDGFA 408606 2621 chr7 142504147 142511587 142507421,142510656 N,N NA;NA EPHB6 EPHB6 IMR90 Hi-C 24141950 EPHB6 41205 2622 chr7 145480276 145501521 145482036 N NA NA NA NA NA NA FAM115A 1880998 2623 chr7 148267938 148271166 148269381 Y NA NA CUL1 IMR90 Hi-C 24141950 CUL1 124767 2624 chr7 148604689 148639767 148638422 Y NA EZH2 EZH2,C7orf33,CUL1,ZNF786,ZNF398,ZNF425 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EZH2 23248 2625 chr7 148655668 148657089 148656197 N NA NA CUL1,EZH2,C7orf33 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PDIA4 68693 2626 chr7 149017357 149020352 149019399 N NA LOC155060 NA NA NA NA LOC155060 34985 2627 chr7 149387536 149388733 149388039 N NA KRBA1 NA NA NA NA KRBA1 23415 2628 chr7 149403797 149405379 149404635 N NA KRBA1 NA NA NA NA KRBA1 6769 2629 chr7 151620809 151623738 151623018 Y RHEB,PRKAG2,PRKAG2 NA LOC100505483,PRKAG2 MCF7 ChIA-PET 22265404 GALNT11 99040 2630 chr7 153075593 153130939 153110114,153120148,153106742 N,N,N NA;NA;NA NA NA NA NA NA ACTR3B 618742 2631 chr7 154995480 155012437 154997933,155006133 N,Y NA;NA NA INSIG1,LOC202781,PAXIP1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 INSIG1 77049 2632 chr7 156179963 156195936 156195181 N NA NA LOC285889,SHH IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C7orf13 237412 2633 chr7 157099015 157101478 157100639 N NA DNAJB6 UBE3C,DNAJB6 IMR90 Hi-C 24141950 DNAJB6 28233 2634 chr7 157111812 157117154 157112697 Y NA DNAJB6 UBE3C,DNAJB6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 12557 2635 chr7 158988447 158995461 158990173 N NA NA VIPR2 IMR90 Hi-C 24141950 LOC154822 187402 2636 chr7 16530003 16534578 16532720 N NA SOSTDC1 ISPD IMR90 Hi-C 24141950 SOSTDC1 24529 2637 chr7 1682863 1692959 1688483,1684733 N,N NA;NA NA TFAMP1,ELFN1,MAD1L1,NUDT1,FTSJ2,SNX8,PSMG3,KIAA1908 IMR90 Hi-C 24141950 KIAA1908 73154 2638 chr7 20276575 20279781 20278475 Y NA MACC1 MACC1 K562 ChIA-PET 22265404 MACC1 19562 2639 chr7 20833923 20839011 20837710 Y SP8 SP8 SP8 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SP8 7415 2640 chr7 22121217 22123953 22123116 N NA NA RAPGEF5 IMR90 Hi-C 24141950 STEAP1B 415948 2641 chr7 23069065 23076046 23075531 N NA FAM126A LOC100506178,IL6,SNORD93,TOMM7,FAM126A,GPNMB IMR90 Hi-C 24141950 FAM126A 15295 2642 chr7 25534250 25536347 25535144,25536304 N,N NA;NA NA NA NA NA NA C7orf31 314433 2643 chr7 25770798 25773844 25772524 N NA NA NA NA NA NA NFE2L3 418003 2644 chr7 25781170 25783948 25783553 N NA NA NA NA NA NA NFE2L3 407899 2645 chr7 25888081 25890339 25889460 N NA NA HOXA9,HOXA10-HOXA9,SKAP2 IMR90 Hi-C 24141950 NFE2L3 301508 2646 chr7 25893819 25902214 25895840,25900976 N,N NA;NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 289633 2647 chr7 25932072 25935862 25935159 N NA NA HOXA9,HOXA10-HOXA9,HOXA11,HOXA-AS5,SNX10,HOXA5,HOXA-AS3,HOXA7,HOXA6,LOC441204,MIR196B,HOXA3,HOXA4,HOTTIP,HOXA13,NFE2L3,HNRNPA2B1,CBX3,HOXA2,HOXA1,HOTAIRM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 255985 2648 chr7 25965048 25968096 25966340 N NA NA LOC441204 IMR90 Hi-C 24141950 NFE2L3 223751 2649 chr7 26290438 26293602 26291940 N NA CBX3,SNX10 HOXA10-HOXA9,HOXA9,SNX10,CBX3,HNRNPA2B1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SNX10 37913 2650 chr7 27528192 27542630 27532547,27541648,27534540 N,N,N NA;NA;NA NA HIBADH IMR90 Hi-C 24141950 HIBADH 159990 2651 chr7 27716829 27719159 27717801 Y NA HIBADH HOTTIP,HOXA13,HIBADH,TAX1BP1,JAZF1 IMR90 Hi-C 24141950 HIBADH 14209 2652 chr7 2901913 2904749 2903480 Y LFNG,LFNG,TTYH3,GNA12 GNA12 GNA12,AMZ1,FOXK1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 GNA12 17954 2653 chr7 32503773 32504660 32504246 N NA LOC100130673,LSM5,AVL9 NA NA NA NA LOC100130673 5667 2654 chr7 37608877 37612934 37609914 N NA NA NA NA NA NA STARD3NL 604874 2655 chr7 38349792 38359783 38351083 N NA LOC100506776 LOC100506776,STARD3NL IMR90 Hi-C 24141950 LOC100506776 21395 2656 chr7 38361636 38371982 38370602 N NA LOC100506776 STARD3NL,LOC100506776 IMR90 Hi-C 24141950 LOC100506776 9196 2657 chr7 401792 403326 402610 N NA NA NA NA NA NA PDGFA 156155 2658 chr7 42723689 42746952 42746331 N NA NA GLI3 IMR90 Hi-C 24141950 C7orf25 204737 2659 chr7 43023949 43078687 43074218,43026569 N,N NA;NA NA HECW1 IMR90 Hi-C 24141950 MRPL32 52010 2660 chr7 43092609 43099185 43098581 N NA NA NA NA NA NA MRPL32 120670 2661 chr7 43111184 43112852 43112159 N NA NA HECW1 IMR90 Hi-C 24141950 MRPL32 139245 2662 chr7 43143893 43145337 43144276 N NA NA HECW1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL32 171954 2663 chr7 44959414 44962417 44961631 N NA PURB OGDH,H2AFV,NACAD,PURB,TMED4,DDX56,MYO1G,SNHG15,PPIA,CCM2,TBRG4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PURB 34454 2664 chr7 45173035 45179606 45178424 N NA TBRG4 TBRG4,PURB,MYO1G,SNHG15 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TBRG4 21718 2665 chr7 4651989 4661247 4659901,4652607 N,N NA;NA NA SDK1,FOXK1 IMR90 Hi-C 24141950 FOXK1 60683 2666 chr7 47254136 47260013 47258674 Y NA NA IGFBP1,IGFBP3,TNS3,C7orf69,PKD1L1 IMR90 Hi-C 24141950 HUS1 759209 2667 chr7 47266520 47268305 47267572 N NA NA IGFBP1,IGFBP3,TNS3,C7orf69,PKD1L1 IMR90 Hi-C 24141950 HUS1 750917 2668 chr7 47724639 47727024 47725625 N NA NA TNS3,C7orf65,C7orf69,LINC00525,PKD1L1 IMR90 Hi-C 24141950 HUS1 292198 2669 chr7 50306011 50307441 50306669 Y IKZF1,FIGNL1 IKZF1 NA NA NA NA IKZF1 36937 2670 chr7 510744 513133 511382 N NA PDGFA,FLJ44511 NA NA NA NA PDGFA 46348 2671 chr7 5589946 5604424 5595918,5602437 Y,N CCZ1,ACTB;NA FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 19714 2672 chr7 5606630 5611141 5609870 Y SLC29A4,TNRC18,FBXL18,FSCN1 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FSCN1 21295 2673 chr7 5612476 5616004 5614718 N NA ACTB,FSCN1 RNF216 IMR90 Hi-C 24141950 FSCN1 16432 2674 chr7 6115736 6122756 6121211 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 16876 2675 chr7 63381889 63389607 63386687 N NA NA NA NA NA NA ZNF736 383579 2676 chr7 63763578 63770151 63767812 N NA ZNF736 NA NA NA NA ZNF736 3035 2677 chr7 64973630 64975627 64974638 N NA NA NA NA NA NA ZNF92 134862 2678 chr7 65956077 65969785 65958630,65965331 N,N NA;NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 73713 2679 chr7 7038120 7044398 7042950 N NA NA NA NA NA NA LOC100131257 92019 2680 chr7 70482083 70483831 70482678 N NA NA NA NA NA NA TYW1B 1814982 2681 chr7 7187756 7189322 7188739 N NA C1GALT1 C1GALT1,COL28A1,ICA1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 C1GALT1 32924 2682 chr7 73687441 73696196 73695113 N NA RFC2,CLIP2 RFC2,LAT2,CLIP2 IMR90 Hi-C 24141950 CLIP2 7609 2683 chr7 75470756 75489468 75472391 N NA RHBDD2 STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR,CCL24,RHBDD2 IMR90 Hi-C 24141950 RHBDD2 18849 2684 chr7 75768531 75773143 75772438 N NA NA MDH2,SRRM3,POR,STYXL1 IMR90 Hi-C 24141950 MDH2 91138 2685 chr7 75793947 75797663 75795986 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 116554 2686 chr7 75992331 75995602 75993919 Y NA YWHAG,ZP3,SRCRB4D YWHAG MCF7 ChIA-PET 22265404 YWHAG 3989 2687 chr7 76357242 76358576 76358010 N NA NA NA NA NA NA POMZP3 100622 2688 chr7 76718103 76720077 76719258 N NA NA NA NA NA NA PTPN12 446696 2689 chr7 76726219 76727856 76727169 N NA NA NA NA NA NA PTPN12 438917 2690 chr7 77139841 77161207 77160369 N NA PTPN12 PION,PTPN12,RSBN1L IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTPN12 5566 2691 chr7 7997533 8000731 7998327 N NA GLCCI1 LOC729852,GLCCI1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLCCI1 7643 2692 chr7 80788708 80793394 80791299 N NA NA SEMA3C MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PHTF2 3360599 2693 chr7 80832653 80842375 80838361,80836669 N,N NA;NA NA NA NA NA NA PHTF2 3404544 2694 chr7 8343381 8391835 8343739,8391290 N,N NA;NA ICA1 NA NA NA NA ICA1 41196 2695 chr7 8428999 8436286 8429635 N NA NA NXPH1 IMR90 Hi-C 24141950 ICA1 126814 2696 chr7 84430347 84454882 84453823,84451254 N,N NA;NA NA SEMA3A IMR90 Hi-C 24141950 KIAA1324L 2234132 2697 chr7 84456729 84511421 84509952 N NA NA NA NA NA NA KIAA1324L 2177593 2698 chr7 86757744 86760485 86758439 N NA DMTF1 DMTF1 K562 ChIA-PET 22265404 DMTF1 21192 2699 chr7 86768308 86771355 86769797 N NA DMTF1 KIAA1324L K562 ChIA-PET 22265404 DMTF1 10322 2700 chr7 86918159 86920527 86919001 N NA NA NA NA NA NA TP53TG1 54281 2701 chr7 90225012 90228917 90225475 N NA NA FZD1,CDK14 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CLDN12 192364 2702 chr7 90928386 90930920 90929496 N NA FZD1 FZD1 K562 ChIA-PET 22265404 FZD1 34603 2703 chr7 91024087 91024859 91024435 N NA NA NA NA NA NA FZD1 130304 2704 chr7 91059663 91062559 91062273 N NA NA NA NA NA NA FZD1 165880 2705 chr7 91157170 91213979 91180597,91212392,91184525 N,N,N NA;NA;NA NA CDK14 IMR90 Hi-C 24141950 FZD1 263387 2706 chr7 92052836 92054469 92053922 N NA GATAD1 GATAD1,ANKIB1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GATAD1 22296 2707 chr7 92675566 92676775 92676174 N NA NA CDK6,FAM133B IMR90 Hi-C 24141950 HEPACAM2 179007 2708 chr7 95986139 95992522 95987975 N NA SLC25A13 NA NA NA NA SLC25A13 34680 2709 chr7 99529622 99533837 99532886 N NA TRIM4 GJC3,TRIM4,ZNF498,AZGP1P1,AZGP1,ZKSCAN1,ZNF3,ZSCAN21,ZNF655,CYP3A7-CYP3AP1,CYP3A43 IMR90 Hi-C 24141950 TRIM4 12399 2710 chr8 101420135 101424470 101422621 Y RNF19A,RNF19A NA RNF19A,SPAG1,ANKRD46,MIR4471 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19A 97808 2711 chr8 101427072 101429409 101428490 Y RNF19A,RNF19A NA SPAG1,RNF19A,ANKRD46,MIR4471 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19A 104745 2712 chr8 101468847 101472174 101470968 N NA NA SPAG1,RNF19A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD46 99838 2713 chr8 101993184 101995883 101994207 N NA YWHAZ ZNF706,FLJ42969,YWHAZ IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 YWHAZ 27561 2714 chr8 101997830 102000312 101998421 N NA YWHAZ FLJ42969,YWHAZ,ZNF706 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 YWHAZ 32207 2715 chr8 102012574 102016852 102016021 Y NA YWHAZ FLJ42969,YWHAZ,ZNF706 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YWHAZ 46951 2716 chr8 102037824 102040100 102038592 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 NA ZNF706,YWHAZ,SNX31,FLJ42969 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YWHAZ 72201 2717 chr8 102119640 102122716 102121428 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 NA YWHAZ,FLJ42969,ZNF706 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 ZNF706 95244 2718 chr8 102124422 102140557 102139081 N NA NA YWHAZ,FLJ42969,ZNF706,PABPC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 77403 2719 chr8 102148311 102156604 102150268 N NA NA YWHAZ,FLJ42969,ZNF706 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 61356 2720 chr8 102160323 102173245 102162146,102167770,102171578 Y,Y,N NA;NA;NA ZNF706 FLJ42969,YWHAZ,ZNF706 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF706 44715 2721 chr8 103540039 103546031 103541412 N NA NA UBR5,ODF1 IMR90 Hi-C 24141950 UBR5 115122 2722 chr8 103558203 103561119 103559548 N NA NA NA NA NA NA KLF10 106864 2723 chr8 103596607 103599300 103597926 N NA NA UBR5,KLF10,ODF1,AZIN1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF10 68683 2724 chr8 103601853 103605262 103602680 N NA NA UBR5,KLF10,ODF1,AZIN1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 62721 2725 chr8 103610096 103614264 103613420 Y KLF10,KLF10 NA UBR5,KLF10,ODF1,AZIN1,RRM2B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 53719 2726 chr8 103742544 103745983 103743375 Y NA NA KLF10,UBR5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 74561 2727 chr8 103754169 103760745 103755159,103759271 N,N NA;NA NA UBR5,KLF10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 86186 2728 chr8 103800137 103802406 103801694 Y NA NA UBR5,KLF10,ODF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AZIN1 73991 2729 chr8 103936946 103938415 103937437 N NA NA AZIN1,ATP6V1C1 IMR90 Hi-C 24141950 AZIN1 60549 2730 chr8 105631377 105637043 105634895,105635899 N,N NA;NA LRP12 LRP12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LRP12 30125 2731 chr8 105676169 105685494 105678772,105683242 N,N NA;NA NA LRP12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LRP12 74917 2732 chr8 106255559 106256983 106256167 N NA NA NA NA NA NA ZFPM2 74164 2733 chr8 106966266 106988359 106987984 N NA NA OXR1 IMR90 Hi-C 24141950 ZFPM2 635119 2734 chr8 107051114 107073735 107072766 N NA NA OXR1 IMR90 Hi-C 24141950 ZFPM2 719967 2735 chr8 110182072 110197223 110193114 N NA NA NA NA NA NA NUDCD1 149127 2736 chr8 110204139 110223308 110221508 N NA NA NA NA NA NA NUDCD1 123042 2737 chr8 112030040 112060514 112052675 N NA NA NA NA NA NA EBAG9 1478111 2738 chr8 116382428 116383577 116382948 N NA NA NA NA NA NA TRPS1 297651 2739 chr8 11753929 11755311 11754812 Y CTSB CTSB CTSB,FAM167A,BLK,NEIL2,GATA4,FDFT1 IMR90 Hi-C 24141950 CTSB 28283 2740 chr8 117565124 117567262 117565859 N NA NA EIF3H IMR90 Hi-C 24141950 EIF3H 200800 2741 chr8 11765736 11767983 11766703 N NA CTSB CTSB,FAM167A,NEIL2,GATA4,BLK,FDFT1,C8orf12 IMR90 Hi-C 24141950 CTSB 40090 2742 chr8 117772895 117775482 117774455 N NA EIF3H,UTP23 NA NA NA NA UTP23 3260 2743 chr8 124624689 124630831 124628926,124625914 N,N NA;NA NA FBXO32,ANXA13,KLHL38 IMR90 Hi-C 24141950 FAM91A1 150051 2744 chr8 125208112 125211261 125210159 Y FAM91A1,TMEM65,RNF139 NA TMEM65,FAM91A1,FER1L6,FER1L6-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM65 173679 2745 chr8 125281801 125296351 125283874 N NA NA FAM91A1,TMEM65,FER1L6,FER1L6-AS1 IMR90 Hi-C 24141950 TMEM65 88589 2746 chr8 125826587 125828652 125827646 N NA NA MTSS1,ZNF572,SQLE,LOC157381,NDUFB9,TATDN1,NSMCE2,KIAA0196 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF572 156887 2747 chr8 125849748 125857204 125852847,125855220 N,N NA;NA NA MTSS1,TATDN1,ZNF572,LOC157381,NDUFB9 IMR90 Hi-C 24141950 ZNF572 128335 2748 chr8 125858544 125862429 125860452 N NA NA MTSS1,TATDN1,ZNF572,LOC157381,NDUFB9,SQLE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF572 123110 2749 chr8 125907848 125910469 125908695 N NA NA MTSS1,NDUFB9,TATDN1,SQLE,LOC157381 IMR90 Hi-C 24141950 ZNF572 75070 2750 chr8 126539620 126542564 126541171 Y KIAA0196,NSMCE2,TRIB1 NA NSMCE2,TRIB1,KIAA0196 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 97057 2751 chr8 126675875 126678293 126676873 N NA NA NSMCE2,KIAA0196,TRIB1 IMR90 Hi-C 24141950 TRIB1 233312 2752 chr8 127073699 127305999 127304978,127302381 N,N NA;NA NA LOC100130231 IMR90 Hi-C 24141950 TRIB1 631136 2753 chr8 128577800 128580231 128579358 Y NA NA LOC727677 IMR90 Hi-C 24141950 MYC 168084 2754 chr8 128629622 128633754 128631035 N NA NA MYC MCF7 ChIA-PET 22265404 MYC 114561 2755 chr8 129187566 129191484 129189261 Y NA NA MYC,PVT1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PVT1 380787 2756 chr8 129349504 129358094 129356112 N NA NA MYC,PVT1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PVT1 542725 2757 chr8 129566544 129570411 129567551,129569107 N,Y NA;NA NA MYC,PVT1 IMR90 Hi-C 24141950 LOC728724 683075 2758 chr8 130381619 130467902 130459144,130466789,130431035,130433067 N,N,Y,Y NA;NA;NA;NA NA MYC MCF7 ChIA-PET 22265404 LOC728724 128133 2759 chr8 130509757 130589667 130585813,130548238,130564553,130569591,130567251,130581527 N,Y,Y,N,Y,N NA;NA;NA;NA;FAM49B;NA NA PVT1,MYC IMR90 Hi-C 24141950 LOC728724 256271 2760 chr8 130592243 130597407 130595235 Y NA NA NA NA NA NA LOC728724 338757 2761 chr8 130602876 130606085 130604649 Y FAM49B NA NA NA NA NA LOC728724 349390 2762 chr8 130693253 130707233 130700029,130697688,130703323 N,N,Y NA;NA;NA NA PVT1,MYC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM49B 321664 2763 chr8 130719720 130722387 130720485 Y NA NA PVT1 IMR90 Hi-C 24141950 FAM49B 306510 2764 chr8 135731145 135734414 135732557 N NA NA ST3GAL1,ZFAT IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ST3GAL1 1146962 2765 chr8 137300 137654 137511 N NA ZNF596,RPL23AP53 NA NA NA NA ZNF596 44546 2766 chr8 141472834 141476841 141474948 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1,PTK2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TRAPPC9 4156 2767 chr8 141500472 141502605 141501969 N NA TRAPPC9,CHRAC1 TRAPPC9,CHRAC1,EIF2C2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CHRAC1 18792 2768 chr8 142031579 142033271 142032320 N NA PTK2 PTK2,DENND3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTK2 20167 2769 chr8 142036056 142037995 142037010 Y NA PTK2 PTK2,DENND3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTK2 24644 2770 chr8 145907891 145912849 145911356 N NA NA ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1,ZNF34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF251 68121 2771 chr8 1686882 1696018 1693770 Y CLN8 CLN8 ARHGEF10,CLN8,MIR596,KBTBD11,ZNF596 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLN8 15852 2772 chr8 17766317 17768469 17767840 N NA PCM1 MTUS1,FGL1,MTMR7 IMR90 Hi-C 24141950 PCM1 11897 2773 chr8 19614092 19616733 19615118 N NA NA CSGALNACT1,SH2D4A,PSD3,INTS10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INTS10 58185 2774 chr8 19855949 19931086 19930298 N NA NA LPL IMR90 Hi-C 24141950 ATP6V1B2 123618 2775 chr8 19935921 19937767 19936665 N NA NA NA NA NA NA ATP6V1B2 116937 2776 chr8 20873650 20875887 20875352 N NA NA NA NA NA NA ATP6V1B2 818946 2777 chr8 22807165 22825737 22808231 Y NA NA PEBP4,TNFRSF10B,BIN3,EGR3,RHOBTB2,KIAA1967,LOC254896,C8orf58 IMR90 Hi-C 24141950 LOC286059 100005 2778 chr8 23363569 23368586 23366546 Y NA ENTPD4,SLC25A37 SLC25A37,NKX3-1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC25A37 17777 2779 chr8 23371251 23373792 23372168 N NA SLC25A37 SLC25A37,NKX3-1,NKX2-6 IMR90 Hi-C 24141950 SLC25A37 12571 2780 chr8 23374659 23382159 23376280 N NA SLC25A37 SLC25A37,NKX2-6 IMR90 Hi-C 24141950 SLC25A37 4204 2781 chr8 2469744 2488227 2481010 N NA NA NA NA NA NA ARHGEF10 697595 2782 chr8 24857709 24859208 24858280 Y NA NA NA NA NA NA GNRH1 423348 2783 chr8 2549869 2570618 2569408 N NA NA NA NA NA NA ARHGEF10 777720 2784 chr8 2572571 2713158 2582545,2585239,2591322,2588447,2628831 N,N,Y,N,N NA;NA;NA;NA;NA NA CSMD1 IMR90 Hi-C 24141950 ARHGEF10 800422 2785 chr8 26124493 26125251 26124991 N NA PPP2R2A PPP2R2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2R2A 23756 2786 chr8 26300697 26315224 26307372 N NA NA BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BNIP3L 60174 2787 chr8 27698432 27701626 27699777 N NA PBK SCARA5 IMR90 Hi-C 24141950 PBK 3083 2788 chr8 28258234 28261674 28260110 N NA ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 14257 2789 chr8 29384707 29388410 29387453 N NA NA C8orf75,DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIF13B 264097 2790 chr8 30768323 30771230 30770223 N NA NA WRN,TEX15,PPP2CB,PURG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TEX15 61790 2791 chr8 33488747 33493144 33490725 N NA NA NA NA NA NA TTI2 118044 2792 chr8 40206469 40208846 40207098 N NA NA ZMAT4 IMR90 Hi-C 24141950 GOLGA7 1139235 2793 chr8 41322616 41325011 41324451 N NA GOLGA7 NA NA NA NA GOLGA7 23070 2794 chr8 42071093 42074367 42072654 N NA NA AP3M2,IKBKB IMR90 Hi-C 24141950 IKBKB 54453 2795 chr8 42643690 42650579 42645469 N NA THAP1 SLC20A2,CHRNA6,C8orf40,CHRNB3,RNF170 IMR90 Hi-C 24141950 THAP1 47895 2796 chr8 47515208 47530748 47529175 N NA NA NA NA NA NA KIAA0146 642741 2797 chr8 49425615 49428510 49427178 Y SNAI2 NA SNAI2 IMR90 Hi-C 24141950 UBE2V2 504620 2798 chr8 49958240 49963938 49959789 N NA NA C8orf22 K562 ChIA-PET 22265404 UBE2V2 1037245 2799 chr8 50037427 50040175 50039184,50038241 N,N NA;NA NA NA NA NA NA UBE2V2 1116432 2800 chr8 50313167 50314573 50314047 N NA NA NA NA NA NA UBE2V2 1392172 2801 chr8 58105582 58119203 58106186 N NA NA LOC100507651,LOC100507632,LOC286177 IMR90 Hi-C 24141950 IMPAD1 199152 2802 chr8 61242311 61243918 61243101 N NA CA8 CA8 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CA8 48357 2803 chr8 61557594 61570795 61564639 Y CA8,CHD7 CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 20529 2804 chr8 61916670 61917899 61917156 N NA NA CHD7 IMR90 Hi-C 24141950 CHD7 325346 2805 chr8 61965108 61969984 61966239,61968579 N,N NA;NA NA NA NA NA NA CHD7 373784 2806 chr8 61991034 62000679 61998031,61993584 N,N NA;NA NA CHD7 IMR90 Hi-C 24141950 CHD7 399710 2807 chr8 62649893 62652775 62651614 N NA ASPH ASPH IMR90 Hi-C 24141950 ASPH 22694 2808 chr8 62670150 62676062 62673481 N NA ASPH ASPH,MIR4470 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ASPH 42951 2809 chr8 62677848 62689684 62679933 Y NA NA ASPH,MIR4470 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ASPH 50649 2810 chr8 62701249 62707053 62702347 N NA NA ASPH,GGH IMR90 Hi-C 24141950 ASPH 74050 2811 chr8 62780418 62785014 62782689 N NA NA NA NA NA NA ASPH 153219 2812 chr8 68273908 68280793 68278688 N NA ARFGEF1 NA NA NA NA ARFGEF1 17996 2813 chr8 73018436 73021498 73019683 N NA NA LOC100132891,TRPA1 IMR90 Hi-C 24141950 TERF1 899599 2814 chr8 73045371 73051699 73046700 N NA NA TRPA1,LOC100132891 IMR90 Hi-C 24141950 TERF1 869398 2815 chr8 73055767 73058253 73056655 N NA NA LOC100132891,TRPA1 IMR90 Hi-C 24141950 TERF1 862844 2816 chr8 74266737 74269932 74268806 N NA NA RDH10,RPL7,STAU2,LOC100128126 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RDH10 59900 2817 chr8 74282839 74285608 74284129 N NA NA STAU2,LOC100128126,RDH10 IMR90 Hi-C 24141950 RDH10 76002 2818 chr8 80705138 80709460 80706701 N NA HEY1 HEY1,MRPS28,TPD52 IMR90 Hi-C 24141950 HEY1 25040 2819 chr8 80765391 80767752 80766018 N NA NA HEY1,MRPS28 IMR90 Hi-C 24141950 HEY1 85293 2820 chr8 81337637 81340093 81338966 N NA NA NA NA NA NA ZBTB10 58355 2821 chr8 8145319 8147990 8146958 N NA NA SGK223,MFHAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FLJ10661 59227 2822 chr8 8152483 8155149 8153965 Y NA NA MFHAS1,SGK223,CLDN23,FLJ10661 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FLJ10661 66391 2823 chr8 82770213 82771615 82771204 N NA SNX16 NA NA NA NA SNX16 15692 2824 chr8 86854928 86859917 86855770 N NA NA CA2 MCF7 ChIA-PET 22265404 WWP1 495077 2825 chr8 86950396 86953326 86951852 N NA NA NA NA NA NA WWP1 401668 2826 chr8 86970675 86973474 86971570 N NA NA NA NA NA NA WWP1 381520 2827 chr8 88980373 88986949 88983404 N NA NA NA NA NA NA DCAF4L2 94077 2828 chr8 8931250 8971272 8939625,8932448,8935207 N,Y,Y NA;CLDN23,PPP1R3B;NA PPP1R3B PPP1R3B,ERI1,TNKS,LOC157273,MIR4660 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PPP1R3B 37880 2829 chr8 9028545 9033788 9029835 N NA PPP1R3B ERI1 IMR90 Hi-C 24141950 PPP1R3B 19393 2830 chr8 9054811 9068816 9055575 N NA PPP1R3B ERI1 IMR90 Hi-C 24141950 PPP1R3B 45659 2831 chr8 90725189 90743412 90741792 N NA RIPK2 RIPK2,NBN,DECR1,OSGIN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RIPK2 26563 2832 chr8 908622 924711 915803,914404 N,N NA;NA NA NA NA NA NA ERICH1 227396 2833 chr8 91177371 91182306 91180319 N NA NA NA NA NA NA CALB1 82264 2834 chr8 91197659 91202042 91200092 N NA NA NA NA NA NA CALB1 102552 2835 chr8 91204628 91210754 91208418,91205322 N,N NA;NA NA NA NA NA NA CALB1 109521 2836 chr8 91223250 91281843 91233838,91238763,91243517,91228290 N,N,N,N NA;NA;NA;NA NA NBN,DECR1 K562,MCF7 ChIA-PET 22265404 CALB1 128143 2837 chr8 91578545 91593905 91580447 N NA NA DECR1,TMEM64 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM64 64228 2838 chr8 94237094 94238289 94237339 N NA NA NA NA NA NA C8orf83 258722 2839 chr8 94241287 94248609 94242219 N NA NA NA NA NA NA C8orf83 262915 2840 chr8 99311530 99319450 99318025 N NA NA NIPAL2,STK3,KCNS2,POP1 IMR90 Hi-C 24141950 POP1 182009 2841 chr9 100499284 100500614 100499932 N NA XPA FOXE1,C9orf156,HEMGN IMR90 Hi-C 24141950 XPA 39593 2842 chr9 100565162 100569799 100565826 Y CORO2A,FOXE1 NA FOXE1,C9orf156 IMR90 Hi-C 24141950 XPA 105471 2843 chr9 100715339 100718285 100716984 N NA C9orf156,HEMGN,ANP32B C9orf156,ANP32B,HEMGN IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEMGN 8205 2844 chr9 100720677 100725609 100721504,100723372 N,N NA;NA C9orf156,HEMGN,ANP32B C9orf156,ANP32B,HEMGN IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEMGN 13543 2845 chr9 101646505 101650656 101649228 N NA NA TGFBR1,COL15A1,GALNT12 IMR90 Hi-C 24141950 GALNT12 76524 2846 chr9 101677700 101680843 101679312 N NA NA COL15A1,TGFBR1,GALNT12 IMR90 Hi-C 24141950 GALNT12 107719 2847 chr9 101689088 101695945 101692284,101694286,101694419 N,N,N NA;NA;NA NA COL15A1,GALNT12,TGFBR1 IMR90 Hi-C 24141950 GALNT12 119107 2848 chr9 102064692 102065665 102065532 N NA NA INVS,NR4A3,STX17 IMR90 Hi-C 24141950 SEC61B 80122 2849 chr9 104211284 104212258 104211633 N NA NA RNF20,ALDOB IMR90 Hi-C 24141950 ZNF189 50121 2850 chr9 104601380 104604308 104603337 N NA NA NA NA NA NA RNF20 305247 2851 chr9 107752691 107754531 107754023 N NA NA ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC286367 216058 2852 chr9 110309616 110311925 110310866 Y KLF4 NA KLF4 MCF7 ChIA-PET 22265404 RAD23B 264099 2853 chr9 110511014 110513713 110512220 Y KLF4 NA KLF4 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RAD23B 465497 2854 chr9 110521990 110523717 110523208 N NA NA KLF4 MCF7 ChIA-PET 22265404 RAD23B 476473 2855 chr9 110545256 110548304 110546718 N NA NA KLF4 IMR90 Hi-C 24141950 RAD23B 499739 2856 chr9 11057095 11065943 11065151 Y NA NA NA NA NA NA C9orf123 3257296 2857 chr9 110855604 110859579 110856666 N NA NA KLF4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAD23B 810087 2858 chr9 110861094 110865691 110862211 N NA NA KLF4 IMR90 Hi-C 24141950 RAD23B 815577 2859 chr9 117313444 117315430 117314381 Y TNFSF8,TNFSF15,DFNB31,ATP6V1G1 DFNB31,ATP6V1G1 DFNB31,ATP6V1G1,C9orf91 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP6V1G1 34564 2860 chr9 123997103 123998948 123997965 N NA RAB14,GSN GGTA1P,CNTRL,RAB14,GSN,STOM IMR90 Hi-C 24141950 GSN 31432 2861 chr9 126057764 126070462 126059901,126065322,126067115,126062019 N,N,N,N NA;NA;NA;NA STRBP MIR600HG,STRBP,RABGAP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STRBP 26909 2862 chr9 126086553 126090029 126089100 N NA NA STRBP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STRBP 55698 2863 chr9 126096890 126103431 126102224 N NA NA RC3H2,RABGAP1,MIR600HG,STRBP,CRB2,DENND1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STRBP 66035 2864 chr9 126104387 126107421 126105857 Y NA NA RC3H2,RABGAP1,MIR600HG,STRBP,CRB2,DENND1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STRBP 73532 2865 chr9 126954310 126960374 126959857 Y DENND1A NA NEK6,DENND1A IMR90 Hi-C 24141950 NEK6 59511 2866 chr9 126963286 126969081 126965004 Y NA NA DENND1A,NEK6,LOC100129034,PSMB7 IMR90 Hi-C 24141950 NEK6 50804 2867 chr9 130005781 130010363 130007514 N NA NA RALGPS1,GARNL3,SLC2A8,ZNF79,RPL12,LRSAM1 IMR90 Hi-C 24141950 SLC2A8 149102 2868 chr9 130762549 130775135 130764247,130766643 Y,N FAM129B,TOR2A,CDK9,FPGS;NA FAM102A FAM102A,DPM2,PIP5KL1,SLC25A25,NAIF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM102A 19737 2869 chr9 131794027 131797061 131795746 N NA SH3GLB2,FAM73B,DOLPP1 FAM73B,SH3GLB2 MCF7 ChIA-PET 22265404 FAM73B 2192 2870 chr9 131998925 132000777 131999580 N NA NA LOC100506190,IER5L,METTL11A,C9orf106,C9orf50,PPP2R4 IMR90,K562,MCF7,H1ESC,HELA Hi-C,ChIA-PET,5C 24141950,22265404,22955621 IER5L 58385 2871 chr9 132007486 132011026 132009105 N NA NA LOC100506190,PPP2R4,CRAT,IER5L,C9orf106,METTL11A,ASB6,C9orf50,PTGES IMR90,K562,GM12878 Hi-C,5C 24141950,22955621 IER5L 66946 2872 chr9 132163230 132170829 132168840,132164128 Y,N NA;NA NA C9orf106,IER5L,LOC100506190,C9orf50,PPP2R4 IMR90,HELA,MCF7,K562 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 LOC100506190 80110 2873 chr9 132174032 132177961 132176088 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 72978 2874 chr9 132222236 132224685 132222978 N NA LOC100506190 PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 26254 2875 chr9 132320268 132339166 132331798,132338242 N,N NA;NA METTL11A FAM73B,DOLPP1,IER5L,LOC100506190,METTL11A,PPP2R4,C9orf106,C9orf50,CRAT IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 METTL11A 49269 2876 chr9 132538094 132540653 132539575 Y C9orf106,FNBP1,TOR1B TOR1B,TOR1A PPP2R4,PRRX2,PTGES,CRAT,IER5L,C9orf50,ASB6,METTL11A,C9orf78,USP20,TOR1B,TOR1A,FAM73B,DOLPP1,LOC100506190,GPR107 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOR1B 24779 2877 chr9 134225123 134225994 134225598 N NA NA PRRC2B,LAMC3,AIF1L,NUP214,FAM78A,POMT1,PPAPDC3 IMR90 Hi-C 24141950 FAM78A 73217 2878 chr9 134244891 134253262 134248946 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 52215 2879 chr9 135896573 135900635 135897838 N NA GFI1B,GTF3C5,CEL GTF3C5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF3C5 5427 2880 chr9 138311620 138314194 138313423 N NA LOC100506599 OLFM1,LOC100506599 IMR90 Hi-C 24141950 LOC100506599 49901 2881 chr9 138874034 138877748 138876804 N NA UBAC1 NACC2,C9orf69,QSOX2 IMR90 Hi-C 24141950 UBAC1 20808 2882 chr9 139158108 139159555 139159192 N NA QSOX2 QSOX2,LHX3,C9orf69 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 QSOX2 20421 2883 chr9 139480400 139484077 139482299 N NA NOTCH1 MIR4674,NOTCH1,SEC16A,C9orf163,EGFL7,SNORA43,SNHG7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NOTCH1 40162 2884 chr9 139507052 139523843 139509446 N NA NA MIR4674,NOTCH1,SEC16A,C9orf163,INPP5E,EGFL7,GPSM1,DNLZ,SDCCAG3,SNAPC4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AGPAT2 58068 2885 chr9 139526306 139542542 139540300 N NA AGPAT2 MIR4674,NOTCH1,INPP5E,SEC16A,C9orf163,EGFL7,SDCCAG3,SNAPC4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AGPAT2 39369 2886 chr9 139595243 139596387 139595863 Y SEC16A,LCNL1,FUT7,C9orf142,ANAPC2,ABCA2 AGPAT2,FAM69B,SNHG7 SNORA43,SNHG7 MCF7 ChIA-PET 22265404 FAM69B 10637 2887 chr9 14491829 14530001 14522881,14511665,14529294 N,N,N NA;NA;NA NA ZDHHC21 IMR90 Hi-C 24141950 SNAPC3 892781 2888 chr9 14952207 14964979 14961599 N NA NA NA NA NA NA SNAPC3 457803 2889 chr9 27302242 27304354 27303343 N NA NA MOB3B IMR90 Hi-C 24141950 MOB3B 225496 2890 chr9 31848103 31865687 31848738 N NA NA NA NA NA NA ACO1 518914 2891 chr9 36467045 36489821 36487818 N NA NA RNF38,MELK IMR90 Hi-C 24141950 RNF38 65850 2892 chr9 36764351 36768215 36766159 Y RNF38,RNF38 NA MELK IMR90 Hi-C 24141950 MELK 191492 2893 chr9 38169440 38173936 38171557 N NA NA DCAF10,SHB IMR90 Hi-C 24141950 SHB 100230 2894 chr9 42250713 42252200 42251462 N NA NA NA NA NA NA ALDH1B1 3858052 2895 chr9 44780384 44782440 44781370 N NA NA NA NA NA NA ALDH1B1 6387723 2896 chr9 44875952 44876567 44876459 N NA NA NA NA NA NA ALDH1B1 6483291 2897 chr9 44877210 44878950 44878076 Y NA NA NA NA NA NA ALDH1B1 6484549 2898 chr9 45436608 45442583 45441889 N NA NA NA NA NA NA ALDH1B1 7043947 2899 chr9 4926151 4932291 4927257 N NA NA RCL1,JAK2,AK3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JAK2 52954 2900 chr9 5492940 5494664 5494113 N NA NA NA NA NA NA KIAA1432 134455 2901 chr9 5499403 5501221 5500484 N NA NA NA NA NA NA KIAA1432 127898 2902 chr9 5863850 5880858 5879726 Y NA ERMP1 ERMP1,MLANA,KIAA2026,KIAA1432 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERMP1 30769 2903 chr9 6078829 6081414 6080395 N NA NA NA NA NA NA RANBP6 63189 2904 chr9 6182780 6192185 6183053 N NA NA GLDC IMR90 Hi-C 24141950 RANBP6 167140 2905 chr9 66454659 66459402 66456658 N NA NA NA NA NA NA LOC642236 1994973 2906 chr9 6679434 6694040 6681361,6683529 Y,N UHRF2,KDM4C;NA NA KDM4C,UHRF2,GLDC K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KDM4C 63601 2907 chr9 68297520 68303059 68299591 Y NA NA NA NA NA NA LOC642236 151316 2908 chr9 68494703 68511435 68496121,68502108,68503557,68505490,68507943 N,N,N,N,N NA;NA;NA;NA;NA LOC642236 NA NA NA NA LOC642236 40328 2909 chr9 69012993 69013484 69013210 N NA NA NA NA NA NA LOC642236 558618 2910 chr9 72560126 72561301 72560715 N NA NA APBA1,MAMDC2,LOC100507299,LOC100507244,C9orf135,TRPM3,KLF9 IMR90 Hi-C 24141950 PTAR1 185250 2911 chr9 73032457 73041971 73034569 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 2884 2912 chr9 73086293 73088161 73087387 N NA NA TRPM3,SMC5,KLF9 IMR90 Hi-C 24141950 KLF9 56720 2913 chr9 73098687 73102149 73100426 Y KLF9 NA SMC5,KLF9,TRPM3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF9 69114 2914 chr9 74242152 74246647 74245525 N NA NA TMEM2 IMR90 Hi-C 24141950 TMEM2 137153 2915 chr9 74255864 74263373 74261985 N NA NA NA NA NA NA TMEM2 120427 2916 chr9 75472139 75474603 75473332 N NA NA ALDH1A1 IMR90 Hi-C 24141950 ALDH1A1 93630 2917 chr9 75637809 75643197 75639545 N NA NA NA NA NA NA ALDH1A1 69576 2918 chr9 75643840 75680545 75645437,75665861,75653640 N,N,N NA;NA;NA NA GDA IMR90 Hi-C 24141950 ALDH1A1 75607 2919 chr9 75744779 75748959 75748069 N NA ANXA1 ANXA1 IMR90 Hi-C 24141950 ANXA1 17822 2920 chr9 75759960 75763800 75761603 N NA ANXA1 ANXA1 MCF7 ChIA-PET 22265404 ANXA1 2981 2921 chr9 75971835 75978958 75972842 N NA NA NA NA NA NA ANXA1 205054 2922 chr9 76536483 76596360 76594108 N NA NA NA NA NA NA ANXA1 769702 2923 chr9 80971671 80981460 80972608 N NA NA NA NA NA NA PSAT1 59612 2924 chr9 90021671 90028434 90026624 N NA NA NA NA NA NA DAPK1 84322 2925 chr9 91391292 91393584 91392933 Y NA NA SHC3,MIR4289,LOC286238,S1PR3,NXNL2,CKS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SPIN1 387995 2926 chr9 91395191 91400951 91396854 N NA NA SHC3,MIR4289,LOC286238,S1PR3 IMR90 Hi-C 24141950 SPIN1 391894 2927 chr9 91546689 91549919 91548420 N NA NA LOC286238,S1PR3,SHC3 IMR90 Hi-C 24141950 CKS2 376194 2928 chr9 93924355 93928319 93924990,93927212 N,N NA;NA NA AUH,LOC100129316,NFIL3 IMR90 Hi-C 24141950 AUH 195887 2929 chr9 96569552 96572709 96570696 N NA NA NA NA NA NA PTPDC1 220367 2930 chr9 96900411 96904158 96902558 N NA NA NA NA NA NA PTPDC1 107335 2931 chr9 96999846 97003018 97001525 N NA ZNF169 PTPDC1 IMR90 Hi-C 24141950 ZNF169 18560 2932 chr9 98314889 98317565 98315722 Y NA PTCH1 C9orf102,FBP1,FANCC,LOC158434,HSD17B3,LOC158435 IMR90 Hi-C 24141950 PTCH1 35642 2933 chrM 2226 16571 16559 N NA NA NA NA NA NA NA -1 2934 chrX 100445921 100447849 100446491 N NA NA NA NA NA NA CENPI 91123 2935 chrX 102351990 102357857 102356930,102354521 N,N NA;NA NA NA NA NA NA BEX4 112163 2936 chrX 102377264 102380819 102379421 N NA NA NA NA NA NA BEX4 89201 2937 chrX 102658543 102663548 102659682 N NA WBP5 NGFRAP1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 WBP5 47163 2938 chrX 106927256 106930442 106928412 Y NA NA NA NA NA NA PRPS1 55602 2939 chrX 109081717 109084532 109083611 N NA NA ACSL4 IMR90 Hi-C 24141950 ACSL4 105096 2940 chrX 109185545 109187566 109186805 N NA NA NA NA NA NA TMEM164 58297 2941 chrX 109201027 109204197 109202898 N NA TMEM164 TMEM164 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM164 41666 2942 chrX 109217962 109219642 109218695 N NA TMEM164 NA NA NA NA TMEM164 26221 2943 chrX 113265069 113299300 113290114,113298562 N,N NA;NA NA NA NA NA NA ALG13 2340723 2944 chrX 113313604 113316717 113314904 N NA NA NA NA NA NA ALG13 2389258 2945 chrX 115004429 115005234 115004832 Y NA NA NA NA NA NA WDR44 2474802 2946 chrX 118017626 118034947 118018816 N NA NA NA NA NA NA LONRF3 73766 2947 chrX 118339584 118341047 118340428 N NA PGRMC1 NA NA NA NA PGRMC1 29164 2948 chrX 119619107 119620683 119619915 N NA LAMP2 LAMP2 K562 ChIA-PET 22265404 LAMP2 15903 2949 chrX 120293938 120297211 120295374 N NA NA NA NA NA NA GLUD2 112476 2950 chrX 120324520 120397782 120325844,120331454 N,N NA;NA NA NA NA NA NA GLUD2 143058 2951 chrX 122897722 122900827 122899022 Y NA THOC2 NA NA NA NA THOC2 30818 2952 chrX 122979623 122982798 122980697 N NA XIAP XIAP,STAG2 HELA,K562 5C 22955621 XIAP 10864 2953 chrX 124531650 124533959 124532883 N NA NA NA NA NA NA ODZ1 433984 2954 chrX 124537580 124540212 124538643 N NA NA NA NA NA NA ODZ1 439914 2955 chrX 124625405 124628176 124626696 N NA NA NA NA NA NA ODZ1 527739 2956 chrX 124891220 124893512 124892312 N NA NA NA NA NA NA ODZ1 793554 2957 chrX 129114804 129115135 129114980 N NA BCORL1 BCORL1,UTP14A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCORL1 24029 2958 chrX 129657277 129658934 129658272 N NA NA NA NA NA NA RBMX2 121334 2959 chrX 129727763 129729781 129728514 N NA NA NA NA NA NA RBMX2 191820 2960 chrX 12981638 12988251 12983000,12986555 N,N NA;NA TLR8-AS1,TMSB4X NA NA NA NA TMSB4X 4975 2961 chrX 13031453 13033341 13032063 N NA TMSB4X FAM9C,TMSB4X IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMSB4X 38227 2962 chrX 130710515 130713272 130712111 N NA NA NA NA NA NA LOC286467 251399 2963 chrX 13304639 13306879 13306262 N NA LOC100093698,LOC100133123 TMSB4X,LOC100133123 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100093698 21892 2964 chrX 133870361 133872639 133872006 N NA NA LOC100506757,PLAC1,FAM122B,HPRT1 IMR90 Hi-C 24141950 FAM122B 58623 2965 chrX 134063360 134064659 134064036 N NA MOSPD1 FAM122C,MOSPD1 IMR90 Hi-C 24141950 MOSPD1 14063 2966 chrX 135177528 135181246 135180469 N NA NA SLC9A6,FHL1 IMR90 Hi-C 24141950 SLC9A6 109945 2967 chrX 135527756 135528692 135528261 N NA NA NA NA NA NA HTATSF1 50546 2968 chrX 135965011 135969629 135967658 N NA RBMX RBMX MCF7 ChIA-PET 22265404 RBMX 2072 2969 chrX 135977590 135979912 135978858 N NA RBMX NA NA NA NA RBMX 14651 2970 chrX 135990021 136032043 135991916 N NA RBMX RBMX,ARHGEF6,CD40LG K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RBMX 27082 2971 chrX 138293060 138297171 138295717,138293801 Y,N NA;NA FGF13 FGF13 MCF7 ChIA-PET 22265404 FGF13 5875 2972 chrX 151063813 151067191 151065831 N NA NA NA NA NA NA GABRE 75960 2973 chrX 152418867 152420702 152420079,152419803 N,Y NA;NA NA NA NA NA NA MAGEA1 65414 2974 chrX 152646665 152647975 152647679 N NA ZNF275,ZFP92 NA NA NA NA ZFP92 35806 2975 chrX 153390646 153392910 153391151 N NA MECP2 MECP2,HCFC1,RENBP,NAA10,TKTL1,RPL10,DNASE1L1 IMR90,K562,HELA Hi-C,5C 24141950,22955621 MECP2 27458 2976 chrX 153401101 153403169 153402262 N NA MECP2 MECP2,HCFC1,RENBP,NAA10,TKTL1,RPL10,DNASE1L1,FLNA,MTCP1NB IMR90,K562,HELA,H1ESC,GM12878 Hi-C,5C 24141950,22955621 MECP2 37913 2977 chrX 16198896 16203482 16201220 N NA NA CTPS2 IMR90 Hi-C 24141950 AP1S2 325796 2978 chrX 16899838 16901728 16901029 N NA RBBP7 RBBP7,TXLNG MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 RBBP7 11304 2979 chrX 18692316 18695196 18693160 Y PHKA2,CDKL5 NA NA NA NA NA PHKA2 307284 2980 chrX 20379986 20381462 20380988 N NA NA RPS6KA3 MCF7 ChIA-PET 22265404 RPS6KA3 95236 2981 chrX 30927739 30929097 30928423 N NA TAB3 NA NA NA NA TAB3 20228 2982 chrX 35642217 35649105 35644014 Y MAGEB16 NA NA NA NA NA PRRG1 1559423 2983 chrX 37613319 37622436 37614343 N NA NA XK,CYBB IMR90 Hi-C 24141950 XK 68186 2984 chrX 38629000 38653958 38629579 N NA MID1IP1 MID1IP1 K562,MCF7 ChIA-PET 22265404 MID1IP1 6727 2985 chrX 38728220 38732383 38729980 Y NA NA NA NA NA NA MID1IP1 67535 2986 chrX 39349653 39351912 39351010 N NA NA NA NA NA NA BCOR 684670 2987 chrX 39546715 39549545 39548183 N NA NA NA NA NA NA BCOR 487037 2988 chrX 39630677 39632544 39631737 N NA NA NA NA NA NA BCOR 404038 2989 chrX 39674335 39678330 39677151 N NA NA BCOR IMR90 Hi-C 24141950 BCOR 358252 2990 chrX 39697529 39716417 39708819,39714581 N,Y NA;BCOR NA BCOR IMR90 Hi-C 24141950 BCOR 320165 2991 chrX 39718926 39720896 39719823 Y NA NA BCOR IMR90 Hi-C 24141950 BCOR 315686 2992 chrX 39865501 39876338 39873172 N NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 160244 2993 chrX 40118697 40134422 40124057,40121592 N,N NA;NA NA BCOR K562 ChIA-PET 22265404 BCOR 82115 2994 chrX 40336967 40340025 40339129 N NA NA NA NA NA NA ATP6AP2 100191 2995 chrX 40427907 40431420 40430285 N NA ATP6AP2 ATP6AP2 IMR90 Hi-C 24141950 ATP6AP2 8796 2996 chrX 40661911 40665989 40664803 N NA NA USP9X,MED14 IMR90 Hi-C 24141950 MED14 67107 2997 chrX 40792285 40793854 40793163 Y ATP6AP2 NA USP9X,MED14 IMR90 Hi-C 24141950 USP9X 151034 2998 chrX 40855404 40857824 40856520 N NA NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 87064 2999 chrX 40863592 40871563 40869783 N NA NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 73325 3000 chrX 40905355 40909010 40906545 N NA USP9X USP9X,MED14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 35878 3001 chrX 41241392 41244853 41243163 N NA DDX3X DDX3X,NYX,USP9X MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 DDX3X 48741 3002 chrX 43136815 43152467 43136896,43138696 N,N NA;NA NA NA NA NA NA FUNDC1 1249754 3003 chrX 44342730 44345419 44344154 N NA NA NA NA NA NA FUNDC1 56802 3004 chrX 44566895 44569036 44567950 N NA NA NA NA NA NA KDM6A 163387 3005 chrX 47541858 47545694 47542814 N NA ELK1,LOC100133957,UXT NA NA NA NA UXT 23279 3006 chrX 52004069 52005662 52005039 Y NA NA NA NA NA NA TSPYL2 1105880 3007 chrX 54664077 54668745 54666050 Y NA NA ITIH6,MAGED2 MCF7 ChIA-PET 22265404 GNL3L 107433 3008 chrX 64805470 64832221 64808187,64816300 N,Y NA;NA NA MSN IMR90 Hi-C 24141950 LAS1L 50784 3009 chrX 65093231 65096486 65094889 N NA NA NA NA NA NA MSN 205720 3010 chrX 65141647 65147976 65145532 N NA NA VSIG4 K562 ChIA-PET 22265404 HEPH 234457 3011 chrX 65292951 65296784 65294941 Y MSN NA NA NA NA NA HEPH 85649 3012 chrX 67657988 67659166 67658604 N NA NA OPHN1 K562 ChIA-PET 22265404 YIPF6 59458 3013 chrX 67789637 67796307 67790996 N NA NA NA NA NA NA YIPF6 71013 3014 chrX 67806208 67810680 67808555 N NA NA NA NA NA NA STARD8 56831 3015 chrX 74408412 74409643 74408656 N NA ABCB7 NA NA NA NA ABCB7 32280 3016 chrX 79766953 79769822 79768698 N NA NA NA NA NA NA BRWD3 295411 3017 chrX 86973608 86983904 86983273 N NA NA NA NA NA NA APOOL 2714710 3018 chrX 9319230 9322338 9320373 N NA NA TBL1X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TBL1X 108997 3019 chrX 97827752 97849444 97828787 N NA NA NA NA NA NA CSTF2 2225904 3020 chrY 10018835 10020091 10019455 N NA NA NA NA NA NA NA -1 3021 chrY 10022314 10024648 10022742 N NA NA NA NA NA NA NA -1