Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 113424978 113425826 113425503 N NA NA FAM19A3,PPM1J,AKR7A2P1,SLC16A1,LRIG2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC16A1 73149 2 chr1 114884482 114886432 114884817 N NA NA SYT6,OLFML3,HIPK1 IMR90 Hi-C 24141950 TRIM33 167349 3 chr1 117420756 117422329 117421763 Y TTF2 PTGFRN PTGFRN,TTF2 MCF7 ChIA-PET 22265404 PTGFRN 30360 4 chr1 147806153 147807360 147806924 Y NA NA NA NA NA NA CHD1L 1091862 5 chr1 148240919 148241978 148241276 N NA NA NA NA NA NA CHD1L 1526628 6 chr1 149214759 149216288 149215498 Y NA NA NA NA NA NA HIST2H2BE 641944 7 chr1 149718121 149719213 149718677 N NA NA NA NA NA NA HIST2H2BE 139019 8 chr1 152019851 152021788 152020653 N NA S100A11 NA NA NA NA S100A11 10340 9 chr1 1545154 1547016 1545432 N NA SSU72,C1orf233,MIB2 C1orf233,MIB2 K562,MCF7 ChIA-PET 22265404 MIB2 3779 10 chr1 156071493 156075968 156072991 N NA UBQLN4,LAMTOR2,MEX3A,LMNA,SEMA4A LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3,MEX3A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNA 8493 11 chr1 157372888 157374484 157373708 N NA NA NA NA NA NA ETV3 264505 12 chr1 158119843 158120878 158120481 N NA CD1D LOC646268,KIRREL,AIM2 IMR90 Hi-C 24141950 CD1D 28859 13 chr1 15929651 15931340 15930154 N NA DDI2 DDI2,DNAJC16,AGMAT,FBLIM1,PLEKHM2,SLC25A34,TMEM82 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDI2 12613 14 chr1 161359256 161360481 161359925 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 75090 15 chr1 161368055 161370296 161369543 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 83889 16 chr1 161408451 161410128 161409649 N NA NA NDUFS2,DUSP12 IMR90 Hi-C 24141950 FCGR2A 65077 17 chr1 163391770 163393520 163392297 N NA NA LMX1A IMR90 Hi-C 24141950 NUF2 100047 18 chr1 166459073 166459926 166459544 N NA NA NA NA NA NA POGK 348798 19 chr1 16825327 16826452 16825733 Y NA NA SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 NECAP2 58160 20 chr1 17230669 17232385 17231062,17231513 N,Y NA;PADI4,PADI2 NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 106038 21 chr1 173990432 173992310 173991191 N NA RC3H1 ZBTB37,RC3H1,GAS5 IMR90 Hi-C 24141950 RC3H1 28222 22 chr1 178036311 178036914 178036547 N NA LOC100302401 NA NA NA NA LOC100302401 26214 23 chr1 181097331 181099107 181098078 Y MR1,IER5 IER5 STX6,ACBD6,MR1 IMR90 Hi-C 24141950 IER5 39693 24 chr1 181103782 181104629 181104134 N NA IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 46144 25 chr1 181997966 181999477 181998939 Y GLUL,GLUL NA ZNF648 MCF7 ChIA-PET 22265404 GLUL 361864 26 chr1 182228019 182229891 182228722 Y RNASEL,GLUL,GLUL NA GLUL K562 ChIA-PET 22265404 GLUL 131450 27 chr1 183573369 183574697 183574128 Y SMG7,NCF2,NCF2,ARPC5 NCF2,ARPC5 SMG7,SHCBP1L,NMNAT2,DKFZP564C196,NCF2,RGL1 IMR90 Hi-C 24141950 NCF2 13313 28 chr1 199010200 199011669 199010859 N NA NA NA NA NA NA LOC100131234 103642 29 chr1 204463041 204464239 204463766 N NA PIK3C2B,MDM4 PIK3C2B,PPP1R15B,LOC127841 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PIK3C2B 3567 30 chr1 204476013 204476492 204476412 N NA PIK3C2B,MDM4 MDM4,PPP1R15B,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 9015 31 chr1 208136134 208137561 208136617 N NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CD46 210751 32 chr1 212428343 212430535 212429917 N NA PPP2R5A DTL,PPP2R5A IMR90 Hi-C 24141950 PPP2R5A 28344 33 chr1 212731364 212732882 212732350 Y NA NA ATF3 K562,MCF7 ChIA-PET 22265404 NENF 125135 34 chr1 2143844 2145516 2144447 N NA C1orf86,SKI SKI,MORN1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 C1orf86 4672 35 chr1 226189583 226190876 226190146 Y H3F3A,C1orf55 C1orf55 NA NA NA NA C1orf55 2517 36 chr1 226297007 226299225 226298034 Y NA H3F3A ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 46599 37 chr1 226309091 226311308 226309840 N NA NA H3F3A,LIN9,ACBD3,MIXL1,C1orf55 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 58683 38 chr1 228770971 228771553 228771234 N NA NA NA NA NA NA RNF187 95903 39 chr1 229162785 229164250 229163709 N NA NA RHOU,NUP133 IMR90 Hi-C 24141950 RAB4A 242629 40 chr1 232764975 232767631 232766001 Y NA NA TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 NTPCR 318739 41 chr1 234634524 234636197 234635492 N NA TARBP1 LOC100506810,RBM34,IRF2BP2,LINC00184,LOC100506795 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TARBP1 19675 42 chr1 234906118 234909075 234908221 Y IRF2BP2 LOC100506810 LOC100506810,IRF2BP2,LOC100506795,LINC00184,TOMM20,RBM34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 46329 43 chr1 234909679 234915861 234911504,234914193 Y,Y IRF2BP2;IRF2BP2 LOC100506810 IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 49890 44 chr1 235089677 235092228 235091108 Y IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 200028 45 chr1 235093978 235100232 235095323,235098329 N,N NA;NA NA IRF2BP2,LOC100506810,TARBP1,LINC00184,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 192024 46 chr1 235104004 235108108 235107109 Y TARBP1,IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810,LINC00184,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 184148 47 chr1 235146443 235149197 235147862 N NA NA LINC00184,TARBP1,LOC100506795,IRF2BP2,LOC100506810 IMR90 Hi-C 24141950 TOMM20 143059 48 chr1 235246084 235247996 235246979 N NA TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 44260 49 chr1 236102896 236110470 236105862,236109616 N,Y NA;LYST NA LYST,NID1,GNG4,B3GALNT2 IMR90 Hi-C 24141950 LYST 72676 50 chr1 244013602 244014686 244013899 N NA NA LOC339529 IMR90 Hi-C 24141950 ZNF238 199875 51 chr1 244978754 244979404 244979017 N NA COX20,HNRNPU-AS1,HNRNPU NA NA NA NA COX20 19235 52 chr1 245081561 245085572 245082329,245083981 Y,N EFCAB2;NA EFCAB2 SMYD3,EFCAB2,C1orf101,HNRNPU,PPPDE1,COX20 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 47712 53 chr1 245115846 245117958 245116422 N NA EFCAB2 EFCAB2,HNRNPU IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 15326 54 chr1 247369752 247374471 247373986 N NA NA MIR3916,ZNF496 MCF7 ChIA-PET 22265404 ZNF669 102078 55 chr1 249166900 249168863 249167945 N NA SH3BP5L,ZNF672,ZNF692,PGBD2 ZNF692,PGBD2,MIR3124,SH3BP5L K562,MCF7 ChIA-PET 22265404 ZNF692 13585 56 chr1 25359395 25362302 25360661 Y RUNX3,SYF2,C1orf63 NA RUNX3,CLIC4 IMR90 Hi-C 24141950 RUNX3 67894 57 chr1 25406363 25410150 25407312,25408979 N,N NA;NA NA RUNX3,FUCA1,CNR2,SYF2 IMR90 Hi-C 24141950 RUNX3 114862 58 chr1 26248466 26250409 26249558 N NA STMN1 STMN1,PAFAH2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STMN1 15473 59 chr1 26825745 26829186 26827487 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2,RPS6KA1 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 26843 60 chr1 26945930 26949320 26947768 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73202 61 chr1 31627302 31628616 31628172 N NA NA SNRNP40,PUM1,NKAIN1,SERINC2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 88738 62 chr1 31867059 31868144 31867702 N NA NA ZCCHC17,FABP3,SERINC2,LOC284551 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZCCHC17 97217 63 chr1 32409201 32411158 32410171 N NA PTP4A2 KHDRBS1,SPOCD1 IMR90 Hi-C 24141950 PTP4A2 5213 64 chr1 38474586 38475425 38475061 N NA SF3A3,FHL3,UTP11L NA NA NA NA UTP11L 2959 65 chr1 40264564 40266481 40265273 N NA BMP8B HEYL,PPIE,BMP8B,MFSD2A,MACF1,NT5C1A,TRIT1,MYCL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 BMP8B 10031 66 chr1 4043953 4045422 4044501 N NA NA NA NA NA NA LOC100133612 226985 67 chr1 42501220 42502368 42501650 N NA NA HIVEP3,CCDC30 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXJ3 299180 68 chr1 53168243 53169321 53168882 Y NA SELRC1 SELRC1,CPT2 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SELRC1 4205 69 chr1 54954489 54956966 54955181 N NA NA TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACOT11 56841 70 chr1 55007456 55010589 55008285,55009683 N,Y NA;NA ACOT11 NA NA NA NA ACOT11 3218 71 chr1 566990 568017 567675 N NA NA NA NA NA NA SAMD11 293104 72 chr1 65532140 65534031 65533241 N NA NA AK4,DNAJC6,LEPR,JAK1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 JAK1 99953 73 chr1 66867014 66869162 66868093 Y NA NA PDE4B IMR90 Hi-C 24141950 MIER1 521416 74 chr1 6803160 6804278 6803896 N NA DNAJC11 CAMTA1 IMR90 Hi-C 24141950 DNAJC11 41194 75 chr1 8013621 8015656 8014342 N NA PARK7 NA NA NA NA PARK7 6058 76 chr1 84737060 84738161 84737723 N NA SAMD13 LPAR3,DNASE2B,UOX,SAMD13,SSX2IP IMR90 Hi-C 24141950 SAMD13 25888 77 chr1 90222190 90225145 90223391 Y NA NA LRRC8C,FLJ27354,LRRC8D IMR90 Hi-C 24141950 LRRC8D 61428 78 chr1 90280556 90282388 90281518 N NA LRRC8D NA NA NA NA LRRC8D 4185 79 chr1 9237015 9243445 9242321 N NA NA SLC2A7,SLC25A33,GPR157,MIR34A,H6PD,SPSB1,TMEM201 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 H6PD 51418 80 chr1 9488607 9489845 9489087 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 109683 81 chr1 95064189 95067379 95064896 N NA NA F3,ALG14,SLC44A3,CNN3 IMR90 Hi-C 24141950 F3 56776 82 chr1 95185497 95187393 95186555 N NA NA F3,ABCD3,ALG14 IMR90 Hi-C 24141950 F3 178084 83 chr10 104956457 104958185 104957163 Y C10orf32,NT5C2 NT5C2 NA NA NA NA NT5C2 3394 84 chr10 106097551 106099058 106098280 N NA ITPRIP ITPRIP,GSTO1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ITPRIP 3888 85 chr10 115032815 115033748 115033433 Y TCF7L2 NA TECTB,GUCY2GP,VTI1A IMR90 Hi-C 24141950 NHLRC2 580643 86 chr10 125295672 125299423 125298041 N NA NA IKZF5,ACADSB,HMX3 IMR90 Hi-C 24141950 BUB3 381912 87 chr10 126604716 126606680 126605367 N NA NA ZRANB1,CTBP2,METTL10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CTBP2 109773 88 chr10 17258134 17259073 17258426 N NA VIM CUBN,TRDMT1,VIM IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 VIM 11185 89 chr10 22517896 22518645 22518360 N NA LOC100130992 COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 22356 90 chr10 26911078 26911685 26911374 N NA NA NA NA NA NA PDSS1 74910 91 chr10 31072820 31074847 31073685 Y NA NA ARHGAP12,ZEB1-AS1,ZEB1,ZNF438 IMR90 Hi-C 24141950 ZNF438 246019 92 chr10 31435028 31436382 31435628 N NA NA ARHGAP12,ZEB1,ZNF438,ZEB1-AS1 IMR90 Hi-C 24141950 ZNF438 114162 93 chr10 31891887 31892933 31892064 N NA NA ZEB1,ARHGAP12,KIF5B IMR90 Hi-C 24141950 KIF5B 452438 94 chr10 32733947 32735775 32735060 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 97834 95 chr10 33949082 33952258 33950952 Y NA NA NA NA NA NA ITGB1 701789 96 chr10 43800047 43800617 43800348 Y CSGALNACT2,HNRNPF,HNRNPF NA ZNF487P IMR90 Hi-C 24141950 HNRNPF 104079 97 chr10 43856554 43859199 43857843 N NA HNRNPF FXYD4,HNRNPF,ZNF487P MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HNRNPF 45497 98 chr10 43915273 43916833 43916222 N NA HNRNPF,ZNF487P ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 10577 99 chr10 48572742 48574178 48573458 N NA NA GPRIN2,GDF10 IMR90 Hi-C 24141950 WDFY4 1319340 100 chr10 49514220 49515677 49514963 N NA NA FRMPD2,ARHGAP22 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WDFY4 377841 101 chr10 5338295 5340396 5339628 Y NA NA AKR1E2,tAKR,AKR1CL1,UCN3,AKR1C2 IMR90 Hi-C 24141950 NET1 114122 102 chr10 69522373 69524489 69524018 Y NA NA NA NA NA NA SIRT1 119938 103 chr10 6969505 6971699 6969912 N NA NA LOC100507127,SFMBT2 IMR90 Hi-C 24141950 LOC439949 347118 104 chr10 70815862 70818292 70817671 N NA SRGN KIAA1279,SRGN,DDX21,VPS26A,SUPV3L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SRGN 29536 105 chr10 70824382 70826711 70825366 N NA SRGN KIAA1279,DDX21,SRGN,VPS26A,SUPV3L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SRGN 21117 106 chr10 70831673 70834616 70833386 N NA SRGN,VPS26A SRGN K562 ChIA-PET 22265404 SRGN 13212 107 chr10 7125938 7128744 7127122 N NA NA SFMBT2,LOC100507127 IMR90 Hi-C 24141950 SFMBT2 324704 108 chr10 73648209 73649507 73648616 N NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 37127 109 chr10 74056704 74059147 74057661 Y PSAP,DDIT4,DNAJB12 DDIT4 NA NA NA NA DDIT4 23027 110 chr10 7485175 7487803 7487059 N NA SFMBT2 PRKCQ,LOC439949,LOC100507127 IMR90 Hi-C 24141950 SFMBT2 31727 111 chr10 7510920 7514883 7513960 N NA NA NA NA NA NA SFMBT2 57472 112 chr10 7516123 7519101 7517883 N NA NA NA NA NA NA SFMBT2 62675 113 chr10 7525127 7527701 7526834 N NA NA NA NA NA NA SFMBT2 71679 114 chr10 7529253 7531923 7531054 N NA NA NA NA NA NA SFMBT2 75805 115 chr10 80059250 80060431 80059908 N NA NA ZMIZ1,RPS24,LOC283050 IMR90 Hi-C 24141950 RPS24 265732 116 chr10 80061955 80063471 80062939 N NA NA ZMIZ1,RPS24,LOC283050,LOC100132987,POLR3A IMR90 Hi-C 24141950 RPS24 268437 117 chr10 81741115 81743113 81741713 N NA NA MAT1A IMR90 Hi-C 24141950 FAM213A 95313 118 chr10 89801883 89803745 89802617 Y NA NA RNLS,CFL1P1,ATAD1,KLLN,PTEN,LIPF,LIPM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTEN 178688 119 chr10 89824017 89828370 89826885,89824973 Y,N KLLN,PTEN;NA NA PTEN,RNLS,KLLN IMR90 Hi-C 24141950 PTEN 200822 120 chr10 92922266 92923595 92922978 N NA NA ANKRD1,PCGF5,RPP30,NUDT9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPP30 290557 121 chr10 94590482 94591239 94590950 N NA NA NA NA NA NA HHEX 140801 122 chr10 975907 979542 977852 N NA LARP4B DIP2C,LARP4B,GTPBP4,IDI2-AS1,IDI1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LARP4B 44205 123 chr10 98499884 98501428 98500882 N NA PIK3AP1 PIK3AP1,SLIT1,TLL2 IMR90 Hi-C 24141950 PIK3AP1 19605 124 chr11 116186255 116188647 116187946 N NA NA NA NA NA NA BUD13 455067 125 chr11 119454751 119455681 119455199 Y NA NA TRIM29,USP2,LOC100499227 IMR90 Hi-C 24141950 PVRL1 143754 126 chr11 123300009 123302145 123301482 N NA NA CLMP IMR90 Hi-C 24141950 GRAMD1B 94383 127 chr11 124980831 124982756 124981698 N NA SLC37A2,TMEM218 CCDC15,TMEM218,PKNOX2 IMR90 Hi-C 24141950 TMEM218 7626 128 chr11 126041000 126043336 126042722 N NA RPUSD4,FAM118B CDON,DDX25 IMR90 Hi-C 24141950 RPUSD4 38251 129 chr11 129148715 129150924 129149580 N NA NA ARHGAP32 IMR90 Hi-C 24141950 LOC100507392 582797 130 chr11 1356023 1357848 1357328 N NA TOLLIP TOLLIP,LOC255512 K562 ChIA-PET 22265404 TOLLIP 25131 131 chr11 14916143 14917316 14916573 N NA NA NA NA NA NA PDE3B 250874 132 chr11 15659328 15660745 15660091 N NA NA SOX6,C11orf58 IMR90 Hi-C 24141950 PDE3B 994059 133 chr11 17228482 17230727 17229566 N NA PIK3C2A NA NA NA NA PIK3C2A 37128 134 chr11 1802668 1804227 1803508 Y TOLLIP,TNNI2,LSP1 IFITM10,MOB2 MOB2,IFITM10,MIR4686,TH,IGF2,IGF2-AS1,INS-IGF2,KRTAP5-4,SYT8 IMR90,GM12878,H1ESC,HELA,K562,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 MOB2 17167 135 chr11 3190012 3192565 3190996 Y NA OSBPL5 NA NA NA NA OSBPL5 3430 136 chr11 33933331 33934562 33934295 N NA LMO2 NA NA NA NA LMO2 19495 137 chr11 33951283 33952672 33952091 N NA LMO2 LMO2 IMR90 Hi-C 24141950 LMO2 37447 138 chr11 350102 351429 350964 Y NA IFITM2,IFITM1 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IFITM1 36111 139 chr11 35071283 35073195 35071962 N NA NA CD44,PDHX,SLC1A2 IMR90 Hi-C 24141950 CD44 87222 140 chr11 355195 356529 355867 N NA IFITM2,IFITM1 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFITM1 41204 141 chr11 43030988 43032424 43031862 N NA NA NA NA NA NA API5 301081 142 chr11 46258587 46261643 46259573 N NA NA PHF21A,DGKZ,CREB3L1,MDK IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF21A 115602 143 chr11 46264407 46266388 46264959 Y NA NA DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF21A 121422 144 chr11 46295327 46295799 46295489 N NA NA CREB3L1,DGKZ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MDK 106819 145 chr11 47413723 47418091 47415846 Y MADD,MADD,MADD,FNBP4,CELF1,CELF1,CELF1,CELF1,SPI1 MYBPC3,SPI1,SLC39A13,PSMC3 SPI1,SLC39A13 K562,MCF7 ChIA-PET 22265404 SLC39A13 11955 146 chr11 57742160 57742776 57742468 N NA NA OR9Q1,OR5B2,OR5B12 IMR90 Hi-C 24141950 TMX2-CTNND1 262165 147 chr11 59959664 59962566 59961026 N NA MS4A6A NA NA NA NA MS4A6A 7525 148 chr11 59999817 60001548 60000524 N NA MS4A6A,MS4A4A NA NA NA NA MS4A4A 46466 149 chr11 60006269 60007957 60006940 N NA MS4A4A NA NA NA NA MS4A4A 40057 150 chr11 63947891 63950002 63948851 N NA MACROD1,STIP1,FERMT3,TRPT1,NUDT22,DNAJC4 NA NA NA NA STIP1 3585 151 chr11 64214388 64218109 64216398 N NA NA SLC22A12,NRXN2,SLC22A11,RASGRP2,PYGM IMR90,K562,HELA Hi-C,5C 24141950,22955621 RPS6KA4 87763 152 chr11 64266499 64268761 64267539 Y RASGRP2 NA NRXN2,RASGRP2,PYGM,SLC22A12,SLC22A11 IMR90,HELA,K562 Hi-C,5C 24141950,22955621 RPS6KA4 139874 153 chr11 65243723 65246037 65244979 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 19196 154 chr11 68621043 68623855 68623133 Y MTL5,CPT1A CPT1A,MRPL21,IGHMBP2 CPT1A,PPP6R3,MTL5,TPCN2,MRPL21,IGHMBP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CPT1A 11644 155 chr11 69196566 69201948 69197200 Y ORAOV1,MYEOV NA MYEOV,CCND1,TPCN2 IMR90 Hi-C 24141950 ORAOV1 288217 156 chr11 69259542 69260604 69260153 N NA NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ORAOV1 229561 157 chr11 72864083 72866682 72865383 Y FCHSD2 FCHSD2 STARD10,FCHSD2,ATG16L2,ARAP1,MIR4692,P2RY2,P2RY6,ARHGEF17 IMR90 Hi-C 24141950 FCHSD2 10940 158 chr11 72868356 72869340 72868927 Y NA FCHSD2 STARD10,FCHSD2,ATG16L2,ARAP1,MIR4692,P2RY2,P2RY6,ARHGEF17 IMR90 Hi-C 24141950 FCHSD2 15213 159 chr11 72895893 72898343 72896935 N NA FCHSD2,P2RY2 FCHSD2,ATG16L2,ARHGEF17,P2RY2,P2RY6,ARAP1,STARD10 IMR90,MCF7 Hi-C,3C,ChIA-PET 24141950,19890323,22265404 P2RY2 31001 160 chr11 72907419 72918974 72916213,72914881,72911382 Y,N,N NA;NA;NA P2RY2 FCHSD2,ATG16L2,P2RY6,ARAP1,P2RY2,STARD10,MIR4692,RELT,PDE2A,ARHGEF17 IMR90,MCF7 Hi-C,3C,ChIA-PET 24141950,19890323,22265404 P2RY2 10370 161 chr11 73490075 73491076 73490679 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 7841 162 chr11 75945605 75947697 75946935 Y NA NA C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 144183 163 chr11 76340198 76341580 76341135 N NA NA NA NA NA NA C11orf30 184129 164 chr11 9385461 9386411 9386014 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 19758 165 chr11 95070210 95071435 95070770 N NA NA SESN3 IMR90 Hi-C 24141950 SESN3 105964 166 chr11 9635013 9636553 9635729 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 39785 167 chr12 111131821 111133117 111132266 N NA HVCN1,PPP1CC NA NA NA NA HVCN1 4204 168 chr12 117072963 117075032 117073457 N NA NA MED13L,FBXW8,MAP1LC3B2,LINC00173 IMR90 Hi-C 24141950 C12orf49 100811 169 chr12 117097198 117102177 117100245 N NA NA MED13L,LINC00173,C12orf49 IMR90 Hi-C 24141950 C12orf49 73666 170 chr12 117113596 117116487 117115113 N NA NA MED13L,C12orf49 IMR90 Hi-C 24141950 C12orf49 59356 171 chr12 120728447 120730190 120729800 N NA SIRT4 PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SIRT4 9934 172 chr12 121565433 121567261 121566917 N NA P2RX7 P2RX4,P2RX7 MCF7,K562 ChIA-PET 22265404 P2RX7 3361 173 chr12 123847801 123851336 123849558 N NA SBNO1,SETD8 SBNO1,RILPL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SBNO1 12813 174 chr12 125238981 125240632 125239996 N NA NA NA NA NA NA SCARB1 107887 175 chr12 125352999 125355075 125354040 N NA SCARB1,UBC NA NA NA NA SCARB1 4480 176 chr12 125533417 125535322 125534255 Y NA AACS AACS K562,MCF7 ChIA-PET 22265404 AACS 14603 177 chr12 133008739 133015623 133014241 N NA NA P2RX2,GALNT9,POLE,LOC100507055,EP400NL,FBRSL1 IMR90 Hi-C 24141950 FBRSL1 51534 178 chr12 133017565 133022676 133022052 Y POLE,DDX51,FBRSL1 FBRSL1 GALNT9,EP400NL,POLE,P2RX2,LOC100507055,FBRSL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FBRSL1 44481 179 chr12 133047593 133048058 133047866 N NA FBRSL1 NA NA NA NA FBRSL1 19099 180 chr12 133051770 133058848 133058386 Y CHFR,ANKLE2,FBRSL1 FBRSL1 FBRSL1 MCF7,K562 ChIA-PET 22265404 FBRSL1 8309 181 chr12 25537966 25540030 25539146 Y NA NA BCAT1,LYRM5,CASC1,KRAS,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 134112 182 chr12 28342769 28344779 28343586 N NA NA KLHDC5,CCDC91 IMR90 Hi-C 24141950 KLHDC5 409582 183 chr12 29300609 29303073 29302292 N NA NA NA NA NA NA ERGIC2 231070 184 chr12 43089514 43091337 43090760 N NA NA NA NA NA NA PRICKLE1 105942 185 chr12 4377457 4379631 4378630 Y PARP11,C12orf4,CCND2,C12orf5 CCND2 PARP11 IMR90 Hi-C 24141950 CCND2 3271 186 chr12 46776187 46778586 46777230 N NA SLC38A2 SLC38A1 K562,MCF7 ChIA-PET 22265404 SLC38A2 9542 187 chr12 49626028 49628598 49628084 N NA TUBA1C RHEBL1,DHH,LMBR1L,TUBA1A,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 30267 188 chr12 50426630 50427458 50427262 N NA RACGAP1 AQP2,ACCN2,RACGAP1,SMARCD1 IMR90 Hi-C 24141950 RACGAP1 7323 189 chr12 53763993 53765970 53765141 Y CSAD,ITGB7,PFDN5,SP1,SP1,PRR13 AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 8009 190 chr12 57822965 57825253 57824717 N NA NA NA NA NA NA MARS 56483 191 chr12 68758654 68759295 68759025 Y IFNG,RAP1B MDM1 RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MDM1 32493 192 chr12 69724272 69726184 69726113 N NA LYZ,YEATS4 YEATS4 K562 ChIA-PET 22265404 LYZ 15950 193 chr12 8177961 8180131 8179414 Y NA FOXJ2 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 5228 194 chr13 105791584 105792942 105792239 N NA NA NA NA NA NA ARGLU1 1427572 195 chr13 110064645 110065574 110065099 Y NA NA MYO16 IMR90 Hi-C 24141950 IRS2 373340 196 chr13 20175586 20177139 20176175 N NA MPHOSPH8 MPHOSPH8,ZMYM5 MCF7 ChIA-PET 22265404 MPHOSPH8 30649 197 chr13 21648893 21650086 21649687 N NA LATS2 LATS2,SAP18 IMR90 Hi-C 24141950 LATS2 13171 198 chr13 21793078 21794928 21793475 N NA MRP63,SKA3 NA NA NA NA SKA3 42337 199 chr13 24040001 24041496 24040630 N NA NA NA NA NA NA SPATA13 693365 200 chr13 26759897 26761605 26760607 Y WASF3 RNF6 WASF3,RNF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RNF6 34903 201 chr13 27295248 27296374 27295817 N NA NA GPR12 IMR90 Hi-C 24141950 USP12 449659 202 chr13 30995378 30996785 30995859 N NA HMGB1 USPL1,KATNAL1,LINC00426,HMGB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HMGB1 43296 203 chr13 36991502 36993169 36992361 Y SPG20,SPG20 CCNA1 NA NA NA NA CCNA1 12798 204 chr13 45491614 45493167 45492188 Y TSC22D1 NA NA NA NA NA NUFIP1 70446 205 chr13 46784792 46786349 46786033 N NA LCP1 NA NA NA NA LCP1 28333 206 chr14 100437274 100439210 100437910 N NA NA EML1,EVL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EVL 92541 207 chr14 100658079 100660822 100659398 Y NA DEGS2,YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DEGS2 32067 208 chr14 100677674 100681647 100680717 N NA YY1 DEGS2,YY1,EVL IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YY1 23455 209 chr14 101083270 101085129 101084497 N NA NA WDR25,BEGAIN,RTL1,MIR665,MIR136,MIR337,MIR432,MIR433,MIR127,MIR431,MIR493,WARS IMR90 Hi-C 24141950 WDR25 240515 210 chr14 101585359 101588399 101587590 N NA NA DIO3OS,LINC00523,MIR127,MIR433,MIR337,MIR432,MIR665,RTL1,MIR136,MEG8,MIR493,MIR431,MIR412,MIR541,MIR409,MIR410,MIR369,MIR656 IMR90 Hi-C 24141950 PPP2R5C 639736 211 chr14 102779982 102781109 102780679 Y NA ZNF839,CINP,TECPR2 DYNC1H1,HSP90AA1,WDR20,MOK,ZNF839 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF839 4987 212 chr14 103557033 103558838 103558071 N NA CDC42BPB,TNFAIP2 CDC42BPB,EXOC3L4,TNFAIP2,EIF5,LOC100131366,MARK3 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CDC42BPB 33291 213 chr14 105108335 105109443 105108614 N NA INF2 MIR203,MIR3545 MCF7 ChIA-PET 22265404 INF2 46500 214 chr14 105538016 105543679 105541913 Y CRIP1,PLD4,GPR132 GPR132 AHNAK2,GPR132,BTBD6,BRF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GPR132 6262 215 chr14 105550561 105554718 105553330 N NA GPR132 BTBD6,BRF1,AHNAK2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GPR132 18807 216 chr14 105558936 105561708 105559707 N NA GPR132 BTBD6,BRF1,JAG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR132 27182 217 chr14 107251823 107253984 107252715 N NA NA NA NA NA NA TMEM121 1258870 218 chr14 22895382 22897334 22896922 Y NA NA NA NA NA NA DAD1 160809 219 chr14 35808947 35809785 35809204 Y BAZ1A,FAM177A1,PPP2R3C,RALGAPA1,NFKBIA PSMA6 PPP2R3C,KIAA0391,PSMA6,NFKBIA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSMA6 47373 220 chr14 50328269 50329167 50328421 N NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 8730 221 chr14 50333708 50335703 50334950 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 METTL21D,SOS2,ARF6,C14orf182,NEMF,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 14169 222 chr14 69280942 69283446 69283147 N NA ZFP36L1 RAD51B,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 17982 223 chr14 71787502 71788081 71787877 N NA NA SIPA1L1,PCNX IMR90 Hi-C 24141950 PCNX 413380 224 chr14 75428906 75429798 75429409 N NA RPS6KL1,EIF2B2 DLST,RPS6KL1,PROX2,MLH3,EIF2B2,ZC2HC1C,NEK9,ACYP1,TMED10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPS6KL1 39761 225 chr14 75724779 75726351 75725827 N NA FOS,LOC731223 TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2,BATF,PGF IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOS 19130 226 chr14 77422599 77423379 77423156 N NA NA IRF2BPL,KIAA1737 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BPL 71655 227 chr14 77498856 77501115 77500184 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 3822 228 chr14 77505975 77507947 77506717 N NA IRF2BPL IRF2BPL IMR90 Hi-C 24141950 IRF2BPL 10941 229 chr14 78107128 78109032 78108328 N NA SPTLC2 NA NA NA NA SPTLC2 24018 230 chr14 90848471 90851185 90849643 N NA C14orf102,CALM1 C14orf102,CALM1,TTC7B,EFCAB11,TDP1,PSMC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CALM1 12142 231 chr14 95961500 95962648 95962134 Y CLMN C14orf49,SNHG10,GLRX5 C14orf49,SNHG10,GLRX5 IMR90 Hi-C 24141950 C14orf49 19327 232 chr14 99500107 99504021 99502200 N NA NA NA NA NA NA SETD3 443205 233 chr15 101389297 101390361 101389977 N NA NA ASB7,LRRK1,ALDH1A3,LINS IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRK1 69099 234 chr15 22514092 22514670 22514464 N NA NA LOC348120 IMR90 Hi-C 24141950 TUBGCP5 318725 235 chr15 25017893 25018740 25018378 Y SNURF,SNRPN,SNRPN,SNRPN NA NA NA NA NA PAR-SN 208401 236 chr15 26326916 26328438 26327594 Y NA NA LOC100128714,ATP10A IMR90 Hi-C 24141950 ATP10A 218567 237 chr15 30712769 30713315 30713041 N NA NA NA NA NA NA LOC100288637 225003 238 chr15 31557748 31559743 31558765 Y MTMR10,KLF13 NA LOC283710,OTUD7A,KLF13 IMR90 Hi-C 24141950 KLF13 59340 239 chr15 31564519 31566320 31565363 N NA NA OTUD7A IMR90 Hi-C 24141950 KLF13 52763 240 chr15 31726250 31727854 31727216 N NA NA KLF13 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 107167 241 chr15 32162594 32163495 32163080 N NA NA NA NA NA NA KLF13 543511 242 chr15 41912763 41914855 41913779 N NA MGA TYRO3,MAPKBP1,MGA IMR90 Hi-C 24141950 MGA 37755 243 chr15 42782080 42785169 42783360 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 2335 244 chr15 51177456 51177913 51177541 Y USP8,TRPM7,SPPL2A AP4E1 TRPM7,SPPL2A,USP50,AP4E1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AP4E1 22956 245 chr15 52273685 52275005 52274233 N NA LEO1,MAPK6 MAPK6,GNB5,MYO5C,BCL2L10 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LEO1 9727 246 chr15 62681571 62684514 62682726 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 VPS13C 328907 247 chr15 65185547 65187106 65186279 Y ZNF609,OAZ2,PLEKHO2,SPG21,SPG21 NA NA NA NA NA PLEKHO2 51465 248 chr15 65587616 65589582 65588376 N NA NA MTFMT,IGDCC4,PDCD7,RASL12,IGDCC3,OSTBETA,CILP,PARP16,CLPX,UBAP1L,DPP8,PTPLAD1,SPG21,KBTBD13 MCF7,K562 ChIA-PET 22265404 CLPX 110053 249 chr15 65595915 65597887 65596914 Y DENND4A NA PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLPX 118352 250 chr15 66125074 66126050 66125386 N NA DENND4A,RAB11A SLC24A1,DENND4A,RAB11A,C15orf44,MEGF11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB11A 35747 251 chr15 66909425 66910486 66909963 N NA NA SMAD6 IMR90 Hi-C 24141950 SMAD6 84188 252 chr15 68176189 68177523 68177210 N NA NA PIAS1,CLN6,CALML4,C15orf61,LOC100506686,IQCH IMR90 Hi-C 24141950 PIAS1 169049 253 chr15 70013637 70014617 70013916 N NA NA TLE3,C15orf50 IMR90 Hi-C 24141950 RPLP1 268478 254 chr15 70765272 70767807 70767357 N NA NA C15orf50,KIF23,LOC145837,TLE3 IMR90 Hi-C 24141950 TLE3 375016 255 chr15 75446905 75447947 75447488 N NA C15orf39 PPCDC,C15orf39,SCAMP5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C15orf39 46274 256 chr15 77197203 77198007 77197760 N NA RCN2 ETFA IMR90 Hi-C 24141950 RCN2 25955 257 chr15 77279841 77281337 77280967 Y PSTPIP1 PSTPIP1 PSTPIP1,RCN2,TSPAN3 IMR90 Hi-C 24141950 PSTPIP1 6128 258 chr15 78182624 78184932 78183631 N NA NA NA NA NA NA TBC1D2B 185062 259 chr15 79152237 79153729 79152765 Y IREB2 MORF4L1 MORF4L1,ADAMTS7 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 MORF4L1 11443 260 chr15 93374262 93376460 93375147 Y NA LOC100507217 CHD2,LOC100507217,ASB9P1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100507217 49613 261 chr15 97036395 97039000 97038022 Y NA NA NA NA NA NA ARRDC4 1464933 262 chr16 11326668 11327588 11327242 Y SNN,LITAF,LITAF,NUBP1,CIITA,SOCS1 SOCS1 CLEC16A IMR90 Hi-C 24141950 SOCS1 22451 263 chr16 22200953 22203981 22202669 Y POLR3E,CDR2 EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 13611 264 chr16 25077206 25079726 25078215 N NA LOC554206,LCMT1 LCMT1,LOC100506655,TNRC6A,ARHGAP17,SLC5A11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC554206 34144 265 chr16 25117619 25119069 25118491 N NA LCMT1 ARHGAP17,LCMT1,ZKSCAN2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LCMT1 3978 266 chr16 29166863 29172118 29168288 N NA NA RRN3P2 IMR90 Hi-C 24141950 RRN3P2 80700 267 chr16 2917758 2918799 2918401 N NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 14397 268 chr16 29301887 29303127 29302319 N NA NA SNX29P2 IMR90 Hi-C 24141950 RRN3P2 215724 269 chr16 29660628 29662450 29661114 N NA SPN,QPRT NA NA NA NA SPN 11850 270 chr16 30468396 30472016 30470436 N NA ZNF771,DCTPP1,SEPHS2,ITGAL SEPHS2,ZNF771,DCTPP1,ZNF688,PRR14,ZNF764,ITGAL,ZNF689,ZNF747,ZNF785,ZNF768,SRCAP MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 SEPHS2 11172 271 chr16 30644779 30647107 30645804 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF785,ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRR14 15134 272 chr16 30816636 30818235 30816901 N NA RNF40,C16orf93,ZNF629 C16orf93,PHKG2,RNF40,ZNF629,MIR762,BCL7C,CTF1,MIR4519,FBXL19-AS1,FBXL19,SRCAP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF629 18113 273 chr16 30825114 30826593 30825690 Y NA ZNF629 ZNF629,RNF40,MIR4519 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF629 26591 274 chr16 4355793 4358194 4357747 Y CORO7 TFAP4,PAM16 ADCY9,CREBBP,TFAP4,LOC100507501,VASN,CORO7-PAM16 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TFAP4 32792 275 chr16 48657253 48658047 48657581 N NA N4BP1 ABCC11,SIAH1,MIR548AE2,N4BP1 IMR90 Hi-C 24141950 N4BP1 13133 276 chr16 50292603 50296162 50293374 N NA ADCY7 ADCY7,BRD7,PAPD5 IMR90 Hi-C 24141950 ADCY7 25661 277 chr16 50299580 50307712 50300384 N NA ADCY7 PAPD5,BRD7,ADCY7 IMR90 Hi-C 24141950 ADCY7 14111 278 chr16 50727107 50728234 50727484 N NA SNX20,NOD2,CYLD NOD2 MCF7 ChIA-PET 22265404 NOD2 2816 279 chr16 57333576 57334302 57333844 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,POLR2C,GPR114,CCDC102A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 54538 280 chr16 68504076 68505362 68504592 Y DPEP2 NA PRMT7,SMPD3 IMR90 Hi-C 24141950 ZFP90 68299 281 chr16 72698031 72699281 72698882 N NA NA ZFHX3 IMR90 Hi-C 24141950 TXNL4B 569816 282 chr16 77223922 77228292 77224715 N NA SYCE1L NA NA NA NA SYCE1L 5057 283 chr16 81785774 81786348 81786007 Y PLCG2,CMIP,CMIP PLCG2 ATMIN,PKD1L2,GAN,BCMO1,MIR4720 IMR90 Hi-C 24141950 PLCG2 26551 284 chr16 85557753 85559447 85558372 Y KIAA0182,KIAA0182 NA KIAA0182,LOC727710 IMR90 Hi-C 24141950 KIAA0182 85582 285 chr16 85568594 85571880 85569859 Y NA NA KIAA0182,LOC727710,FAM92B,LOC400548,GINS2,LINC00311 IMR90 Hi-C 24141950 KIAA0182 73149 286 chr16 85586093 85594215 85587888,85590313 N,N NA;NA NA GINS2,KIAA0182,LINC00311,LOC400548,FAM92B,KIAA0513,LOC727710,C16orf74,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0182 50814 287 chr16 85602645 85605709 85604520 Y NA KIAA0182 LINC00311,FAM92B IMR90 Hi-C 24141950 KIAA0182 39320 288 chr16 85988551 85990665 85989572 N NA NA IRF8,COX4NB,MTHFSD,COX4I1,FLJ30679,FOXC2,LOC400550 IMR90 Hi-C 24141950 IRF8 55777 289 chr16 86010022 86019652 86012517,86017814 N,N NA;NA NA COX4NB,MTHFSD,COX4I1,FLJ30679,FOXC2,LOC400550,C16orf74,IRF8,LOC146513 IMR90 Hi-C 24141950 IRF8 77248 290 chr16 87811166 87813408 87812194 N NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 11568 291 chr16 87839439 87841047 87840291 N NA KLHDC4 SLC7A5 MCF7 ChIA-PET 22265404 KLHDC4 39841 292 chr17 1130172 1133949 1131519,1133059 N,N NA;NA ABR ABR,CRK,YWHAE,INPP5K,LOC100306951,PITPNA,SCARF1,RILP IMR90 Hi-C 24141950 ABR 39556 293 chr17 1156967 1157523 1157271 N NA NA ABR,YWHAE,PITPNA,INPP5K,LOC100306951,SCARF1,RILP,TUSC5,BHLHA9,CRK,SLC43A2 IMR90 Hi-C 24141950 ABR 66351 294 chr17 14507625 14509502 14508390 Y HS3ST3B1 NA NA NA NA NA HS3ST3B1 303119 295 chr17 16891309 16892242 16891745 N NA NA MPRIP,FLCN IMR90 Hi-C 24141950 MPRIP 53832 296 chr17 21177932 21179684 21179189 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 C17orf103,MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 8284 297 chr17 25570438 25572690 25571760 Y LGALS9,WSB1 WSB1 KSR1,WSB1,MIR4522 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 WSB1 48416 298 chr17 28877102 28878400 28878025 N NA TBC1D29 CPD,GOSR1,LRRC37BP1,TMIGD1,SUZ12P IMR90 Hi-C 24141950 TBC1D29 8184 299 chr17 29922968 29925217 29923770 Y EVI2A NA NA NA NA NA C17orf79 261109 300 chr17 37773278 37775144 37774317 N NA STARD3,TCAP PPP1R1B K562 ChIA-PET 22265404 STARD3 18189 301 chr17 39804148 39805364 39804711 N NA EIF1 KRT19,KRT15,LOC147093 MCF7 ChIA-PET 22265404 EIF1 39763 302 chr17 41392216 41394306 41393152 N NA TMEM106A BRCA1,NBR2,NBR1,RND2,VAT1,IFI35,RPL27,TMEM106A,LOC100130581 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 28322 303 chr17 41398992 41401663 41400720 N NA TMEM106A IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581,DHX8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM106A 35098 304 chr17 41796962 41798547 41798229 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 DUSP3 57821 305 chr17 44343009 44345088 44344331 Y NA KANSL1 KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KANSL1 40269 306 chr17 45145630 45148939 45148303 N NA NA NPEPPS IMR90 Hi-C 24141950 CDC27 117726 307 chr17 56308503 56311738 56310335 Y SUPT4H1 MKS1,MPO LPO,MKS1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MKS1 11537 308 chr17 58211758 58213364 58212801 N NA NA C17orf64,HEATR6,LOC645638,USP32,APPBP2,LOC653653 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEATR6 55466 309 chr17 63117964 63119838 63119566 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 65044 310 chr17 66015491 66017378 66016183 Y NA KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 14470 311 chr17 67322511 67324069 67323379 N NA NA KCNJ16,UNK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKAR1A 814401 312 chr17 6840373 6844429 6843790 N NA NA LOC100506713,ALOX12,ALOX12P2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ALOX12 54955 313 chr17 6851218 6852626 6852215 N NA ALOX12 NA NA NA NA ALOX12 46758 314 chr17 74993994 74995023 74994497 Y SRSF2 NA MFSD11,MGAT5B,SEC14L1 IMR90 Hi-C 24141950 SEC14L1 89702 315 chr17 75953355 75956635 75954599 Y NA NA TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100131096 151245 316 chr17 7893132 7893749 7893419 N NA NA CHD3,EFNB3,DNAH2,KDM6B,CNTROB,KCNAB3,TRAPPC1,GUCY2D,ALOX15B,LOC284023 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CNTROB 57690 317 chr17 79309614 79321702 79316617,79312225 Y,N NA;NA SLC38A10,LINC00482,TMEM105 ACTG1,SLC38A10,LINC00482,TMEM105,MIR4740,BAHCC1,C17orf70,FSCN2,C17orf56,C17orf89,MIR3186,NPLOC4 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 TMEM105 5140 318 chr17 79924128 79925238 79924839 N NA SIRT7,MAFG,MAFG-AS1,PYCR1,ASPSCR1 ASPSCR1 K562,MCF7 ChIA-PET 22265404 ASPSCR1 10188 319 chr17 80173705 80177782 80175177 N NA CCDC57,SLC16A3 CSNK1D MCF7 ChIA-PET 22265404 CCDC57 3016 320 chr17 81146729 81148959 81148007 Y METRNL NA METRNL,B3GNTL1,TBCD MCF7 ChIA-PET 22265404 METRNL 109162 321 chr18 33160712 33162420 33161477 N NA NA NA NA NA NA INO80C 82757 322 chr18 43355011 43356441 43355476 N NA NA SLC14A1,EPG5,SIGLEC15 IMR90 Hi-C 24141950 EPG5 190864 323 chr18 46501788 46502859 46502279 Y SMAD7 SMAD7 SMAD7,CTIF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SMAD7 24707 324 chr18 47832588 47835590 47834419,47833492 Y,N CCDC11,MBD1,MBD1;NA MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 17896 325 chr18 5058673 5059768 5059300 N NA NA NA NA NA NA LINC00526 178260 326 chr18 52713114 52716188 52714944 N NA NA NA NA NA NA POLI 917265 327 chr18 54751643 54753440 54752008 N NA NA NA NA NA NA ONECUT2 349477 328 chr18 60741894 60743192 60742323 N NA NA NA NA NA NA BCL2 243421 329 chr18 60765402 60768824 60766716 N NA NA NA NA NA NA BCL2 217789 330 chr18 73350430 73352255 73351160 N NA NA NA NA NA NA TSHZ1 427720 331 chr18 74211180 74212681 74212099 N NA ZNF516,LOC284276 ZNF516 MCF7 ChIA-PET 22265404 ZNF516 4034 332 chr18 74214641 74216326 74215668 N NA ZNF516,LOC284276 ZNF516 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF516 7495 333 chr18 74331341 74333453 74332183 N NA NA ZNF516,LOC284276,ZNF407 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC284276 90729 334 chr18 9017000 9018088 9017591 Y ANKRD12 NA CCDC165,ANKRD12,RALBP1 IMR90 Hi-C 24141950 NDUFV2 84540 335 chr18 9684532 9685534 9684992 N NA RAB31 PPP4R1,VAPA,RAB31,TXNDC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB31 22694 336 chr19 10518491 10521088 10519757 Y P2RY11,ICAM3,S1PR5,C19orf38,ATG4D,TYK2,PDE4A,PDE4A,PDE4A TYK2,CDC37,PDE4A CDC37 MCF7,K562 ChIA-PET 22265404 CDC37 4220 337 chr19 13842012 13843307 13842493 N NA CCDC130,MRI1,C19orf53 CACNA1A IMR90 Hi-C 24141950 CCDC130 15446 338 chr19 14485551 14487238 14486359 Y NA CD97,DDX39A DDX39A K562 ChIA-PET 22265404 CD97 4718 339 chr19 15441427 15443901 15442997 N NA AKAP8 BRD4 MCF7 ChIA-PET 22265404 AKAP8 46711 340 chr19 16394098 16395222 16394541 Y NWD1,KLF2 NA EPS15L1,AP1M1,KLF2,CALR3 IMR90 Hi-C 24141950 AP1M1 85433 341 chr19 1895107 1895959 1895618 Y OAZ1,DOT1L,CSNK1G2 REXO1,KLF16,FAM108A1,SCAMP4,CSNK1G2 BTBD2,CSNK1G2,KLF16 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SCAMP4 9414 342 chr19 1901506 1902749 1902135 Y OAZ1,DOT1L,C19orf35,CSNK1G2 KLF16,FAM108A1,SCAMP4,CSNK1G2 NA NA NA NA SCAMP4 2624 343 chr19 24216352 24217133 24217128 Y ZNF254 NA NA NA NA NA ZNF254 52843 344 chr19 24360860 24361834 24361075 N NA NA NA NA NA NA ZNF254 90884 345 chr19 2461435 2463077 2462144 N NA TIMM13,LMNB2,GADD45B LMNB2,GADD45B MCF7,K562 ChIA-PET 22265404 LMNB2 4477 346 chr19 28958973 28960700 28959796 N NA NA NA NA NA NA UQCRFS1 743436 347 chr19 29096533 29101534 29097829 N NA NA NA NA NA NA UQCRFS1 602602 348 chr19 30214852 30216388 30215230 Y NA C19orf12 NA NA NA NA C19orf12 8156 349 chr19 30335371 30337421 30336360 N NA CCNE1 NA NA NA NA CCNE1 32470 350 chr19 33739352 33740751 33740339 Y NA NA CHST8,CEBPA,LOC80054,PEPD IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CEBPA 52679 351 chr19 33743426 33746890 33745497 Y CEBPA CEBPA,LOC80054 CHST8,PEPD,LOC80054,CEBPA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CEBPA 46540 352 chr19 33749498 33753183 33751718 N NA CEBPA,LOC80054 CHST8,PEPD,LOC80054,CEBPA IMR90 Hi-C 24141950 CEBPA 40247 353 chr19 33756727 33760888 33758498 N NA CEBPA,LOC80054 LOC80054,CEBPA,PEPD,CEBPG,CHST8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CEBPA 32542 354 chr19 33763518 33766010 33764431 N NA CEBPA,LOC80054 CEBPA,LOC80054,CHST8,PEPD MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CEBPA 27420 355 chr19 33822688 33823905 33823448 N NA CEBPA,LOC80054,CEBPG CEBPA,LOC80054 K562 ChIA-PET 22265404 LOC80054 28925 356 chr19 34625046 34626312 34625437 N NA LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 37040 357 chr19 36192413 36194336 36193534 Y USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33 UPK1A,MLL4,IGFLR1,U2AF1L4,PSENEN,LIN37 MLL4,ZBTB32 K562 ChIA-PET 22265404 MLL4 14585 358 chr19 37708328 37710237 37709064 N NA ZNF585A,ZNF585B,ZNF383 ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF585B 6877 359 chr19 37808346 37809515 37808923 N NA HKR1 NA NA NA NA HKR1 16065 360 chr19 42028075 42028805 42028683 N NA NA CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 53726 361 chr19 42051333 42053688 42052480 N NA CEACAM21 C19orf69,ATP5SL,LOC100505495 IMR90 Hi-C 24141950 CEACAM21 28843 362 chr19 42432722 42435602 42433345 N NA ARHGEF1,RABAC1 ARHGEF1,CD79A K562 ChIA-PET 22265404 RABAC1 27926 363 chr19 44711080 44712108 44711660 Y NA ZNF226,ZNF227 NA NA NA NA ZNF227 4583 364 chr19 45942064 45943991 45943117 N NA CD3EAP,PPP1R13L,ERCC1,FOSB ERCC1,PPM1N,RTN2,VASP,FOSB,CD3EAP,PPP1R13L K562,MCF7 ChIA-PET 22265404 ERCC1 14887 365 chr19 45953309 45954884 45953899 Y NA CD3EAP,PPP1R13L,ERCC1,FOSB,RTN2,PPM1N FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 16369 366 chr19 46635362 46637656 46636758 N NA NA IGFL1,IGFL3,IGFL2 IMR90 Hi-C 24141950 CCDC61 137023 367 chr19 47362220 47367601 47363854 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AP2S1 8017 368 chr19 48103369 48104522 48103723 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 GLTSCR1,NAPA MCF7 ChIA-PET 22265404 GLTSCR1 6931 369 chr19 48685372 48689432 48686270 N NA LIG1 ELSPBP1,CARD8,LOC100505812 IMR90 Hi-C 24141950 LIG1 11812 370 chr19 486920 490092 489084 N NA MADCAM1,TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 MADCAM1 6398 371 chr19 50871692 50873006 50872314 N NA KCNC3,NAPSB,NR1H2,POLD1,SPIB NA NA NA NA NR1H2 6674 372 chr19 51713326 51715984 51714324 N NA CD33 MYH14,KLK13,CTU1,SIGLECP3,C19orf75,IGLON5,SIGLEC10 IMR90 Hi-C 24141950 CD33 12351 373 chr19 54879743 54882458 54881051 N NA LAIR1 PRKCG,CACNG7,CACNG6,VSTM1,TSEN34,MBOAT7,RPS9 K562,HELA 5C 22955621 LAIR1 3022 374 chr19 54883016 54888029 54886488 N NA LAIR1 PRKCG,CACNG7,CACNG6,VSTM1,TSEN34,MBOAT7,RPS9 K562,HELA 5C 22955621 LAIR1 6295 375 chr19 54898937 54900922 54899997 N NA LAIR1 NA NA NA NA LAIR1 22216 376 chr19 56824783 56828064 56826463 N NA NA NA NA NA NA ZNF582 76825 377 chr19 56830219 56834188 56831420,56833400 Y,Y ZSCAN5A;ZSCAN5A NA NA NA NA NA ZNF582 70701 378 chr19 6516227 6517591 6516702 N NA DENND1C,TNFSF9 TNFSF9 K562 ChIA-PET 22265404 TNFSF9 13419 379 chr19 7413194 7415856 7414550 N NA ARHGEF18 ZNF557,INSR IMR90 Hi-C 24141950 ARHGEF18 44143 380 chr19 7770403 7771761 7770799 Y ARHGEF18,PEX11G,MCOLN1,PNPLA6,XAB2,LOC100131801,STXBP2,MAP2K7,C19orf59 C19orf59,TRAPPC5 NA NA NA NA TRAPPC5 24696 381 chr19 9895597 9897066 9896739 N NA ZNF846,FBXL12,UBL5,PIN1 NA NA NA NA ZNF846 16187 382 chr2 10169310 10169873 10169380 N NA KLF11 TAF1B,GRHL1,RRM2,KLF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF11 13809 383 chr2 10418321 10420709 10418838 Y NA HPCAL1 RRM2,GRHL1,NOL10,HPCAL1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HPCAL1 22331 384 chr2 11111600 11113069 11112138 N NA NA FLJ33534,KCNF1,C2orf50,PQLC3 IMR90 Hi-C 24141950 PDIA6 158640 385 chr2 113914716 113915609 113915040 N NA PSD4 IL1RN,LOC654433,PAX8,PSD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSD4 15951 386 chr2 118942880 118944290 118943689 N NA NA NA NA NA NA INSIG2 96830 387 chr2 128144253 128146056 128145238 N NA NA CYP27C1,IWS1 IMR90 Hi-C 24141950 ERCC3 92501 388 chr2 129229700 129231934 129230909 N NA NA HS6ST1 IMR90 Hi-C 24141950 HS6ST1 153529 389 chr2 130634332 130635724 130635164 N NA NA NA NA NA NA MZT2B 303777 390 chr2 131555011 131556475 131555467 N NA NA PLEKHB2,FAM168B K562,MCF7 ChIA-PET 22265404 FAM168B 294529 391 chr2 132439502 132440550 132440017 N NA NA NA NA NA NA LOC150776 189116 392 chr2 133024937 133026022 133025749 N NA ANKRD30BL GPR39,ANKRD30BL,CEP68,STAMBP,NRXN1,KCNIP3,ADCY3,EML4,DDX1,MIR4778,STARD7,TGOLN2,MAP3K2,RNU4ATAC,GCC2,CNNM3,LHCGR,LOC100189589,CLASP1,GMCL1,SULT6B1,ANKRD20A8P,MRPS9,NMS,RHOQ,CAPG,DGUOK,SMYD5,MPHOSPH10,ARID5A,HAAO,RMND5A,LOC440905,LIMS2,FOXN2,GPAT2,CIB4,LOC100216479,FEZ2,LOC729121,TTC7A,RTKN,CDKL4,POLR2D,LOC339803,EMILIN1,LYG1,MYCNOS,STEAP3,FAM49A,CKAP2L,EFR3B,OTOF,HK2,CNGA3,GEMIN6,ALK,SPR,LOC440895,IL18RAP,LOC375190,PTRHD1,C2orf81,MATN3,PEX13,FABP1,NPHP1,FAM161A,DDX18,ADRA2B,KRCC1,BIRC6,CCDC74B,C2orf49,THNSL2,ST3GAL5,NAT8B,ERCC3,CCDC88A,QPCT,LOC100506123,TLX2,REG1A,LOC284950,CHCHD5,SMC6,LOC254128,PNPT1,DBI,LOC100505716,LOC285103,TMSB10,RAD51AP2,MGAT4A,PLEKHH2,ELMOD3,PKDCC,GALM,GLI2,LIMS3-LOC440895,RPL31,ASXL2,LOC100132215,SMEK2,FBLN7,EPT1,SRSF7,DUSP2,CYP4F30P,LOC100131320,LOC388948,ATOH8,GCFC2,ACTR2,C2orf27B,IWS1,GPR17,MTIF2,LBX2,POU3F3,SUPT7L,SPDYA,TEKT4,ANKRD39,WDR54,RAB1A,IL36A,FAM123C,LOC285000,REV1,GPR148,MRPL33,EPB41L5,RPS27A,CEBPZ,EHBP1,RALB,APOB,DUSP11,LOC400958,CRIPT,CYP1B1-AS1,CHAC2,GFPT1,NPAS2,PTCD3,LOC389023,TRIM54,SFXN5,MALL,NT5C1B-RDH14,LOC100507334,POLE4,C2orf18,IL1A,C2orf73,CD8A,ATL2,LOC654342,UNC50,ITPRIPL1,HADHB,IL1R1,ZFP36L2,MAP4K3,FIGLA,LOC440900,ZNF512,POTEE,PDCL3,ABCG8,CCDC142,MYADML,MIR4783,PCBP1-AS1,PFN4,LOC150568,SEMA4F,TMEM177,LOC401010,MRPL19,GCKR,TTC32,GGCX,LOC151009,THUMPD2,LOC728537,IL36B,PCDP1,VAMP5,LRRTM4,SF3B14,SULT1C2,RGPD4,MCEE,AAK1,SFTPB,SLC5A7,SCTR,ACTR1B,CIAO1,DNAJC5G,SIX3,SERTAD2,PIGF,CD8B,GGT8P,SLC9A2,NFU1,SNAR-H,POTEKP,VWA3B,SH3RF3,FAHD2B,UBXN2A,LOC284998,MEIS1,FAM98A,LOC90784,LAPTM4A,CCDC104,LOC100499194,MAPRE3,PPP1R21,ANXA4,LOC440910,LOC100506421,FAM84A,GKN2,TMEM185B,RASGRP3,ABHD1,AFF3,CRIM1,MOGS,BOLA3,DNAJC27,MZT2B,MAL,NRBP1,UXS1,PRKD3,SOCS5,FLJ30838,TTC31,RNF103-CHMP3,HADHA,MIR4435-1,NOTO,RPL23AP7,C1QL2,CHMP3,RNF149,AUP1,TBC1D8,AGBL5,GYPC,MSH6,LOC728730,VPS54,EIF5B,GALNT14,PLEK,GEN1,LOC100505876,MIR4432,VAMP8,ST6GAL2,C2orf91,KIAA1841,MORN2,LOC100128590,IL1RL2,BMP10,EIF2B4,ARHGEF4,REG3A,SULT1C3,ADD2,TSN,IFT172,TSGA10,HNRPLL,DPY30,LGALSL,ZNF2,ZNF638,IMP4,CCDC138,INSIG2,ACOXL,FBXO41,DYSF,C2orf51,TMEM214,TMEM127,ALMS1P,CDC42EP3,MZT2A,TMEM150A,EGR4,FOXI3,C2orf16,FOSL2,OR7E91P,UGGT1,TMEM87B,TXNDC9,NBAS,CREG2,RGPD6,ABCG5,PUM2,RNF181,LINC00116,LOC646743,MIR4757,C2orf78,MRPL35,LOC541471,INHBB,RHOB,LOC388942,STON1-GTF2A1L,DCTN1,CCDC115,LOC100129726,KCNS3,UNQ6975,ZAP70,NAGK,C2orf53,MIR4436A,C2orf76,THADA,VRK2,SLC5A6,RABL2A,CCDC75,PLEKHB2,MXD1,ANKRD36BP2,REG1P,MIR217,C2orf63,ASTL,WDR33,NLRC4,XPO1,RETSAT,TUBA3E,TRIM43B,CAMKMT,BCL2L11,PUS10,PAIP2B,RPIA,SH2D6,PCBP1,USP39,REG3G,FSHR,MYCN,SEMA4C,ANKRD23,C1D,IL1R2,MKI67IP,MOB1A,LOC389043,ACTR3BP2,EPCAM,MAT2A,PCGF1,RGPD2,BIN1,KANSL3,LOC100287010,LOXL3,CD207,DPYSL5,VAX2,PPP1CB,POLR1A,LOC644838,BCL11A,SULT1C4,ANKRD36,DBIL5P2,B3GNT2,LINC00309,ARHGEF33,TFCP2L1,C2orf89,IL1F10,OTX1,PPM1B,GKN1,ANTXR1,FKBP1B,ATP6V1B1,CCT7,CCDC74A,TEX261,MTA3,MFSD9,COX5B,RGPD1,FOXD4L1,FLJ42351,EFEMP1,SLC30A6,FAM168B,GDF7,NEURL3,TUBA3D,POLR1B,USP34,MSH2,MFSD2B,EXOC6B,RANBP2,LRRTM1,LOC100286979,C2orf84,KCNK12,MIR4267,CAD,FAM138B,SPRED2,HTRA2,ACTG2,AHSA2,SLC30A3,RBKS,NCK2,MIR548AD,FLJ16341,TRMT61B,SLC1A4,PROKR1,ATAD2B,LOC100630918,LCLAT1,CAPN14,LMAN2L,C2orf65,CTNNA2,SRD5A2,MIR4265,CCT4,INPP4A,SLC20A1,COX7A2L,SNRNP27,TMEM178,MIR4266,SULT1C2P1,MIR4436B1,MRPS5,IMMT,ALMS1,CYP27C1,HS6ST1,LOC728819,WTH3DI,CHST10,LOC375196,SMPD4,OSR1,PAPOLG,KRTCAP3,EPAS1,MDH1,C2orf74,IL18R1,LOC1720,CCDC164,LOC285074,VIT,PLGLB2,C2orf61,LONRF2,CCDC85A,UCN,C2orf28,DQX1,FAM178B,CENPA,MRPL30,MERTK,TCF23,DNAJC27-AS1,FAM176A,IL36G,IL1B,LIPT1,ZNF513,COA5,CLEC4F,PPP3R1,BRE,C2orf15,RAB6C,DOK1,PLGLA,GPR45,MIR4780,TMEM131,CBWD2,TSPYL6,LOC388946,CLIP4,C2orf42,SNRPG,LOC654433,LOC100505624,PTPN18,C2orf71,POMC,EML6,KIF3C,WASH2P,LOC150776,GTF3C2,WDR43,MEMO1,ETAA1,TRIM43,MRPL53,CAPN13,MIR4264,TIA1,SPTBN1,CENPO,C2orf55,FLJ12334,HS1BP3,COMMD1,IL1RN,LOC285033,ANKRD36B,LOC440894,PRADC1,C2orf68,TCF7L1,TMEM37,ATP6V1E2,SIX2,REG1B,CYP26B1,PREPL,WDR35,PAX8,OST4,CGREF1,PELI1,REL,POTEF,ZC3H8,KLHL29,DHX57,C2orf40,CNTNAP5,C2orf44,TGFBRAP1,PRKCE,LRPPRC,SLC35F5,FBXO48,GPR113,SUCLG1,LOC100288911,NCAPH,WDR92,TACR1,MARCO,MIR216A,CALM2,BUB1,ANKRD53,SLC4A1AP,DDX11L2,LOC100134259,FANCL,ACYP2,ITSN2,DNMT3A,PROM2,LYG2,LOC100287216,GPR75-ASB3,PCYOX1,MAP4K4,PNO1,LOC151534,YIPF4,PREB,ANAPC1,EMX1,REEP1,GPN1,PRORSD1P,ZNF514,WDPCP,KDM3A,NAT8,KCMF1,YPEL5,C2orf27A,LIMS1,EDAR,DYNC2LI1,LOC339807,SEPT10,FUNDC2P2,EHD3,SLC9A4,RAB10,FAM179A,HEATR5B,IL37,OXER1,SOWAHC,AFTPH,LOC389033,LOC729234,DNAH6,TET3,SMYD1,RGPD8,UGP2,LOC442028,STRN,CFC1B,LTBP1,FNDC4,MIR3682,MYO7B,ZC3H6,SNX17,TGFA,C2orf56,TPRKB,TMEM17,SAP130,FBXO11,AMMECR1L,RFX8,EIF2AK3,GNLY,PLB1,MSGN1,SLC3A1,TMEM182,C2orf29,LINC00486,FAM59B,PTPN4,CNNM4,RTN4,ACTR3,MITD1,LOC645949,IL1RL1,PPM1G,ASB3,INO80B-WBP1,CNRIP1,XDH,LBH,IL36RN,SLC8A1,PROC,LINC00152,KHK,EN1,NCOA1,FAM82A1,KCNK3,FAM136A,FER1L5,PSD4,SNORD89,SLC4A5,MPV17,SDC1,SPAST,VSNL1,ERLEC1,MIR216B,SRBD1,APLF,CCDC93,LOC84931,CCDC121,C2orf43,SFT2D3,DTNB,RGPD3,TTL,FHL2,LOC100133985,SOS1,TP53I3,RAB11FIP5,ARHGAP25,MTHFD2,BOLA3-AS1,KCNG3,EIF2AK2,DPP10,CYP1B1,C2orf70,TTC27,SNRNP200,PSME4,FAHD2A,MCFD2 IMR90 Hi-C 24141950 ANKRD30BL 9395 393 chr2 133028950 133030958 133030240 Y NA ANKRD30BL GPR39,CEP68,STAMBP,NRXN1,KCNIP3,ADCY3,EML4,DDX1,MIR4778,STARD7,TGOLN2,MAP3K2,RNU4ATAC,GCC2,CNNM3,LHCGR,LOC100189589,CLASP1,GMCL1,SULT6B1,ANKRD20A8P,MRPS9,NMS,RHOQ,CAPG,DGUOK,SMYD5,MPHOSPH10,ARID5A,HAAO,RMND5A,LOC440905,LIMS2,FOXN2,GPAT2,CIB4,LOC100216479,FEZ2,LOC729121,TTC7A,RTKN,CDKL4,POLR2D,LOC339803,EMILIN1,LYG1,MYCNOS,STEAP3,FAM49A,CKAP2L,EFR3B,OTOF,HK2,CNGA3,GEMIN6,ALK,SPR,LOC440895,IL18RAP,LOC375190,PTRHD1,C2orf81,MATN3,PEX13,FABP1,NPHP1,FAM161A,DDX18,ADRA2B,KRCC1,BIRC6,CCDC74B,C2orf49,THNSL2,ST3GAL5,NAT8B,ERCC3,CCDC88A,QPCT,LOC100506123,TLX2,REG1A,LOC284950,CHCHD5,SMC6,LOC254128,PNPT1,DBI,LOC100505716,LOC285103,TMSB10,RAD51AP2,MGAT4A,PLEKHH2,ELMOD3,PKDCC,GALM,GLI2,LIMS3-LOC440895,RPL31,ASXL2,LOC100132215,SMEK2,FBLN7,EPT1,SRSF7,DUSP2,CYP4F30P,LOC100131320,LOC388948,ATOH8,GCFC2,ACTR2,C2orf27B,IWS1,GPR17,MTIF2,LBX2,POU3F3,SUPT7L,SPDYA,TEKT4,ANKRD39,WDR54,RAB1A,IL36A,FAM123C,LOC285000,REV1,GPR148,MRPL33,EPB41L5,RPS27A,CEBPZ,EHBP1,RALB,APOB,DUSP11,LOC400958,CRIPT,CYP1B1-AS1,CHAC2,GFPT1,NPAS2,PTCD3,LOC389023,TRIM54,SFXN5,MALL,NT5C1B-RDH14,LOC100507334,POLE4,C2orf18,IL1A,C2orf73,CD8A,ATL2,LOC654342,UNC50,ITPRIPL1,HADHB,IL1R1,ZFP36L2,MAP4K3,FIGLA,LOC440900,ZNF512,POTEE,PDCL3,ABCG8,CCDC142,MYADML,MIR4783,PCBP1-AS1,PFN4,LOC150568,SEMA4F,TMEM177,LOC401010,MRPL19,GCKR,TTC32,GGCX,LOC151009,THUMPD2,LOC728537,IL36B,PCDP1,VAMP5,LRRTM4,SF3B14,SULT1C2,RGPD4,MCEE,AAK1,SFTPB,SLC5A7,SCTR,ACTR1B,CIAO1,DNAJC5G,SIX3,SERTAD2,PIGF,CD8B,GGT8P,SLC9A2,NFU1,SNAR-H,POTEKP,VWA3B,SH3RF3,FAHD2B,UBXN2A,LOC284998,MEIS1,FAM98A,LOC90784,LAPTM4A,CCDC104,LOC100499194,MAPRE3,PPP1R21,ANXA4,LOC440910,LOC100506421,FAM84A,GKN2,TMEM185B,RASGRP3,ABHD1,AFF3,CRIM1,MOGS,BOLA3,DNAJC27,MZT2B,MAL,NRBP1,UXS1,PRKD3,SOCS5,FLJ30838,TTC31,RNF103-CHMP3,HADHA,MIR4435-1,NOTO,RPL23AP7,C1QL2,CHMP3,RNF149,AUP1,TBC1D8,AGBL5,GYPC,MSH6,LOC728730,VPS54,EIF5B,GALNT14,PLEK,GEN1,LOC100505876,MIR4432,VAMP8,ST6GAL2,C2orf91,KIAA1841,MORN2,LOC100128590,IL1RL2,BMP10,EIF2B4,ARHGEF4,REG3A,SULT1C3,ADD2,TSN,IFT172,TSGA10,HNRPLL,DPY30,LGALSL,ZNF2,ZNF638,IMP4,CCDC138,INSIG2,ACOXL,FBXO41,DYSF,C2orf51,TMEM214,TMEM127,ALMS1P,CDC42EP3,MZT2A,TMEM150A,EGR4,FOXI3,C2orf16,FOSL2,OR7E91P,UGGT1,TMEM87B,TXNDC9,NBAS,CREG2,RGPD6,ABCG5,PUM2,RNF181,LINC00116,LOC646743,MIR4757,C2orf78,MRPL35,LOC541471,INHBB,RHOB,LOC388942,STON1-GTF2A1L,DCTN1,CCDC115,LOC100129726,KCNS3,UNQ6975,ZAP70,NAGK,C2orf53,MIR4436A,C2orf76,THADA,VRK2,SLC5A6,RABL2A,CCDC75,PLEKHB2,MXD1,ANKRD36BP2,REG1P,MIR217,C2orf63,ASTL,WDR33,NLRC4,XPO1,RETSAT,TUBA3E,TRIM43B,CAMKMT,BCL2L11,PUS10,PAIP2B,RPIA,SH2D6,PCBP1,USP39,REG3G,FSHR,MYCN,SEMA4C,ANKRD23,C1D,IL1R2,MKI67IP,MOB1A,LOC389043,ACTR3BP2,EPCAM,MAT2A,PCGF1,RGPD2,BIN1,KANSL3,LOC100287010,LOXL3,CD207,DPYSL5,VAX2,PPP1CB,POLR1A,LOC644838,BCL11A,SULT1C4,ANKRD36,DBIL5P2,B3GNT2,LINC00309,ARHGEF33,ANKRD30BL,TFCP2L1,C2orf89,IL1F10,OTX1,PPM1B,GKN1,ANTXR1,FKBP1B,ATP6V1B1,CCT7,CCDC74A,TEX261,MTA3,MFSD9,COX5B,RGPD1,FOXD4L1,FLJ42351,EFEMP1,SLC30A6,FAM168B,GDF7,NEURL3,TUBA3D,POLR1B,USP34,MSH2,MFSD2B,EXOC6B,RANBP2,LRRTM1,LOC100286979,C2orf84,KCNK12,MIR4267,CAD,FAM138B,SPRED2,HTRA2,ACTG2,AHSA2,SLC30A3,RBKS,NCK2,MIR548AD,FLJ16341,TRMT61B,SLC1A4,PROKR1,ATAD2B,LOC100630918,LCLAT1,CAPN14,LMAN2L,C2orf65,CTNNA2,SRD5A2,MIR4265,CCT4,INPP4A,SLC20A1,COX7A2L,SNRNP27,TMEM178,MIR4266,SULT1C2P1,MIR4436B1,MRPS5,IMMT,ALMS1,CYP27C1,HS6ST1,LOC728819,WTH3DI,CHST10,LOC375196,SMPD4,OSR1,PAPOLG,KRTCAP3,EPAS1,MDH1,C2orf74,IL18R1,LOC1720,CCDC164,LOC285074,VIT,PLGLB2,C2orf61,LONRF2,CCDC85A,UCN,C2orf28,DQX1,FAM178B,CENPA,MRPL30,MERTK,TCF23,DNAJC27-AS1,FAM176A,IL36G,IL1B,LIPT1,ZNF513,COA5,CLEC4F,PPP3R1,BRE,C2orf15,RAB6C,DOK1,PLGLA,GPR45,MIR4780,TMEM131,CBWD2,TSPYL6,LOC388946,CLIP4,C2orf42,SNRPG,LOC654433,LOC100505624,PTPN18,C2orf71,POMC,EML6,KIF3C,WASH2P,LOC150776,GTF3C2,WDR43,MEMO1,ETAA1,TRIM43,MRPL53,CAPN13,MIR4264,TIA1,SPTBN1,CENPO,C2orf55,FLJ12334,HS1BP3,COMMD1,IL1RN,LOC285033,ANKRD36B,LOC440894,PRADC1,C2orf68,TCF7L1,TMEM37,ATP6V1E2,SIX2,REG1B,CYP26B1,PREPL,WDR35,PAX8,OST4,CGREF1,PELI1,REL,POTEF,ZC3H8,KLHL29,DHX57,C2orf40,CNTNAP5,C2orf44,TGFBRAP1,PRKCE,LRPPRC,SLC35F5,FBXO48,GPR113,SUCLG1,LOC100288911,NCAPH,WDR92,TACR1,MARCO,MIR216A,CALM2,BUB1,ANKRD53,SLC4A1AP,DDX11L2,LOC100134259,FANCL,ACYP2,ITSN2,DNMT3A,PROM2,LYG2,LOC100287216,GPR75-ASB3,PCYOX1,MAP4K4,PNO1,LOC151534,YIPF4,PREB,ANAPC1,EMX1,REEP1,GPN1,PRORSD1P,ZNF514,WDPCP,KDM3A,NAT8,KCMF1,YPEL5,C2orf27A,LIMS1,EDAR,DYNC2LI1,LOC339807,SEPT10,FUNDC2P2,EHD3,SLC9A4,RAB10,FAM179A,HEATR5B,IL37,OXER1,SOWAHC,AFTPH,LOC389033,LOC729234,DNAH6,TET3,SMYD1,RGPD8,UGP2,LOC442028,STRN,CFC1B,LTBP1,FNDC4,MIR3682,MYO7B,ZC3H6,SNX17,TGFA,C2orf56,TPRKB,TMEM17,SAP130,FBXO11,AMMECR1L,RFX8,EIF2AK3,GNLY,PLB1,MSGN1,SLC3A1,TMEM182,C2orf29,LINC00486,FAM59B,PTPN4,CNNM4,RTN4,ACTR3,MITD1,LOC645949,IL1RL1,PPM1G,ASB3,INO80B-WBP1,CNRIP1,XDH,LBH,IL36RN,SLC8A1,PROC,LINC00152,KHK,EN1,NCOA1,FAM82A1,KCNK3,FAM136A,FER1L5,PSD4,SNORD89,SLC4A5,MPV17,SDC1,SPAST,VSNL1,ERLEC1,MIR216B,SRBD1,APLF,CCDC93,LOC84931,CCDC121,C2orf43,SFT2D3,DTNB,RGPD3,TTL,FHL2,LOC100133985,SOS1,TP53I3,RAB11FIP5,ARHGAP25,MTHFD2,BOLA3-AS1,KCNG3,EIF2AK2,DPP10,CYP1B1,C2orf70,TTC27,SNRNP200,PSME4,FAHD2A,MCFD2 IMR90 Hi-C 24141950 ANKRD30BL 13408 394 chr2 134877849 134879398 134878645 N NA NA NA NA NA NA CCNT2 796994 395 chr2 136764822 136766983 136765571 N NA DARS NA NA NA NA DARS 21600 396 chr2 145420381 145422327 145421170 N NA NA ZEB2 K562 ChIA-PET 22265404 ZEB2 142423 397 chr2 157197291 157200169 157198645 N NA NA GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CYTIP 1100435 398 chr2 160476085 160479439 160477757 N NA BAZ2B MARCH7,BAZ2B IMR90 Hi-C 24141950 BAZ2B 3026 399 chr2 160514779 160516913 160515719 N NA BAZ2B TANC1,MARCH7,WDSUB1,BAZ2B IMR90 Hi-C 24141950 BAZ2B 41720 400 chr2 168148793 168149980 168149210 N NA NA NA NA NA NA CERS6 1162779 401 chr2 174877045 174879197 174877920 N NA SP3 CIR1,SP3 IMR90 Hi-C 24141950 SP3 46615 402 chr2 200603432 200604811 200604216 N NA NA NA NA NA NA C2orf69 171168 403 chr2 20548975 20552385 20550636 N NA PUM2 HS1BP3,PUM2 IMR90 Hi-C 24141950 PUM2 21831 404 chr2 208497216 208498453 208497996 N NA METTL21A CCNYL1,METTL21A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 METTL21A 7243 405 chr2 232251649 232254259 232253204 N NA B3GNT7 B3GNT7 K562 ChIA-PET 22265404 B3GNT7 6076 406 chr2 232409628 232411262 232410538 N NA LINC00471,NMUR1 NMUR1,LINC00471,C2orf57,PDE6D,ARMC9,SNORD20,NCL,SNORA75 IMR90 Hi-C 24141950 NMUR1 14446 407 chr2 232418922 232420522 232419788 N NA LINC00471,NMUR1 NCL,SNORD20,SNORA75,NMUR1,LINC00471 IMR90 Hi-C 24141950 NMUR1 23740 408 chr2 232526162 232528691 232526848 Y DIS3L2 PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 44544 409 chr2 232529494 232532633 232531249 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 40602 410 chr2 232545133 232546666 232546015 Y COPS7B PTMA PTMA,PDE6D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTMA 26569 411 chr2 235335414 235336189 235335670 N NA NA SPP2,TRPM8 IMR90 Hi-C 24141950 ARL4C 69504 412 chr2 237454817 237455918 237455471 N NA NA NA NA NA NA COPS8 538166 413 chr2 238382243 238384619 238384087 N NA NA LRRFIP1,MLPH,COL6A3,RAB17,COPS8,PRLH IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRFIP1 151605 414 chr2 240528939 240530615 240529698 N NA NA HDAC4,LOC150935 IMR90 Hi-C 24141950 HDAC4 206296 415 chr2 240849976 240851715 240850897 Y NA NA LOC150935,MIR4786 IMR90 Hi-C 24141950 NDUFA10 113104 416 chr2 24713344 24715340 24714000 N NA NA CENPO,NCOA1 IMR90 Hi-C 24141950 ITSN2 129947 417 chr2 27978837 27980767 27979886 N NA MRPL33 FOSL2,RBKS,MRPL33 MCF7 ChIA-PET 22265404 MRPL33 13817 418 chr2 28601381 28602392 28601723 N NA FOSL2 RBKS,BRE,GPN1,CCDC121,SLC4A1AP,MRPL33,LOC100505716,FOSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOSL2 13387 419 chr2 37551031 37552848 37552050 N NA NA QPCT,FAM82A1,PRKD3,EIF2AK2,C2orf56 IMR90 Hi-C 24141950 C2orf56 92257 420 chr2 37961150 37963393 37962369 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 61824 421 chr2 38152001 38153175 38152719 N NA NA CDC42EP3,PRKG2,CYP1B1-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 CYP1B1 150148 422 chr2 41962351 41964614 41963380 Y EML4 NA NA NA NA NA EML4 431876 423 chr2 43035983 43038875 43037229 Y NA OXER1,HAAO THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HAAO 16232 424 chr2 43184553 43191107 43186643,43188866 Y,N NA;NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HAAO 164802 425 chr2 43332181 43335313 43333949 N NA NA THADA,ZFP36L2,LOC100129726 IMR90 Hi-C 24141950 ZFP36L2 118432 426 chr2 43353886 43358729 43354953 Y OXER1,ZFP36L2 NA THADA,LOC100129726,ZFP36L2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 95016 427 chr2 43384556 43387307 43385877 N NA NA THADA,LOC100129726,ZFP36L2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 66438 428 chr2 43395158 43397856 43396657 Y OXER1,ZFP36L2 NA LOC100129726,ZFP36L2,THADA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 55889 429 chr2 43425842 43429467 43428804 N NA ZFP36L2,LOC100129726 LOC100129726,ZFP36L2,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 24278 430 chr2 48337841 48339665 48338778 N NA NA FOXN2,FBXO11,PPP1R21,STON1-GTF2A1L,MSH6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXN2 202130 431 chr2 55338344 55340375 55339500 N NA NA C2orf63,RTN4,EML6 IMR90 Hi-C 24141950 RTN4 60610 432 chr2 60325279 60328386 60327506 Y NA NA NA NA NA NA BCL11A 452247 433 chr2 61990453 61992099 61991522 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCT4 123707 434 chr2 64977231 64979427 64978377 Y CEP68 NA SERTAD2,LOC339807,AFTPH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 96185 435 chr2 65084714 65087635 65086465 Y AFTPH,SERTAD2,RAB1A,ACTR2 NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 SLC1A4 127944 436 chr2 65091722 65092919 65092358 N NA NA SERTAD2,LOC339807,AFTPH IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC1A4 122660 437 chr2 65172315 65174890 65173546 Y AFTPH,SERTAD2 SLC1A4 SERTAD2,AFTPH,LOC339807,LOC400958,SLC1A4,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC1A4 40689 438 chr2 65662733 65664361 65663298 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 3077 439 chr2 69930110 69932883 69932019 N NA ANXA4 AAK1,GFPT1,ANXA4,GMCL1 IMR90 Hi-C 24141950 ANXA4 36244 440 chr2 71114456 71116255 71114989 N NA NA ATP6V1B1,VAX2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TEX261 105746 441 chr2 71502776 71504415 71503681 N NA NA NA NA NA NA ZNF638 54470 442 chr2 74209141 74215647 74212569 N NA NA DGUOK,TET3,C2orf78,STAMBP,BOLA3,MOB1A,MTHFD2,BOLA3-AS1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 DGUOK 55188 443 chr2 85644808 85646848 85645690 N NA NA ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 ELMOD3 62965 444 chr2 8654605 8655870 8655631 N NA NA LOC100506274,LINC00299,ID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ID2 166243 445 chr2 8674510 8676960 8675157,8676874 Y,Y ID2;NA NA LOC100506274,LINC00299,ID2,LOC339788 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 145153 446 chr2 8682427 8687172 8683991 N NA NA LOC100506274,ID2,LOC339788,LINC00299 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 134941 447 chr2 8818495 8819668 8819199 N NA ID2 NA NA NA NA ID2 2445 448 chr2 95872582 95874048 95873154 N NA ZNF514,ZNF2 ZNF2 MCF7 ChIA-PET 22265404 ZNF2 41399 449 chr2 9941014 9942180 9941635 N NA TAF1B YWHAQ,KLF11,CYS1,ADAM17,ODC1,RRM2,GRHL1,TAF1B,HPCAL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TAF1B 41391 450 chr20 1782616 1785866 1784339 N NA NA LOC100289473,SIRPA,PDYN,STK35 IMR90 Hi-C 24141950 SIRPA 88947 451 chr20 1797133 1798298 1797818 N NA NA STK35,SIRPA,LOC100507495,SNPH,FKBP1A-SDCBP2 IMR90 Hi-C 24141950 SIRPA 76515 452 chr20 20723948 20725288 20724495 N NA RALGAPA2 RALGAPA2 IMR90 Hi-C 24141950 RALGAPA2 30682 453 chr20 23127556 23130166 23128690 N NA NA CD93,THBD K562 ChIA-PET 22265404 THBD 97255 454 chr20 23135276 23137708 23136863 Y THBD,CD93,GZF1 NA NA NA NA NA THBD 104975 455 chr20 23205335 23207264 23206232 Y THBD,CD93,GZF1,CST3 NA THBD,CD93 IMR90 Hi-C 24141950 NXT1 124109 456 chr20 23635641 23638126 23636602 N NA CST3 CST9 IMR90 Hi-C 24141950 CST3 17067 457 chr20 2504983 2506276 2505632 N NA ZNF343 TMC2 IMR90 Hi-C 24141950 ZNF343 15205 458 chr20 31260292 31261954 31261084 N NA NA C20orf112,COMMD7,DNMT3B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 COMMD7 69860 459 chr20 3409899 3413028 3411147 N NA C20orf194,ATRN ATRN,C20orf194 IMR90 Hi-C 24141950 C20orf194 21590 460 chr20 36926614 36927747 36927226 N NA NA LOC100287792,RPRD1B,TTI1,TGM2,KIAA1755,BPI IMR90 Hi-C 24141950 LOC388796 136271 461 chr20 39945247 39947139 39946150 N NA ZHX3,LPIN3 ZHX3,IQGAP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 ZHX3 16508 462 chr20 40321131 40323689 40321788 N NA NA CHD6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD6 73998 463 chr20 4054066 4056257 4055831 N NA NA RNF24,PANK2,MAVS IMR90 Hi-C 24141950 RNF24 57850 464 chr20 4062718 4063726 4063481 N NA NA RNF24,PANK2,MAVS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SMOX 65724 465 chr20 46634709 46635837 46635022 N NA NA SULF2 MCF7 ChIA-PET 22265404 NCOA3 504108 466 chr20 48366480 48368544 48367382 Y ZNFX1,B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8 B4GALT5 B4GALT5 IMR90 Hi-C 24141950 B4GALT5 36059 467 chr20 48384403 48386995 48384959 Y ZNFX1,B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8 SLC9A8 B4GALT5,SLC9A8,KCNB1,SPATA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 42255 468 chr20 52208185 52211957 52210053 N NA ZNF217 SUMO1P1,BCAS1,CSRNP3,BMP7,SULF2,ZMYND8,CYP24A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323,22265404 ZNF217 8549 469 chr20 52367120 52368574 52367955 Y ZNF217 NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 123674 470 chr20 52445229 52446914 52445745 N NA SUMO1P1 ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 45334 471 chr20 56047493 56048656 56048331 N NA NA CTCFL,MIR5095 IMR90 Hi-C 24141950 RAB22A 836115 472 chr20 58621040 58622576 58621376 Y PHACTR3,PPP1R3D,C20orf177,C20orf197 C20orf197 NA NA NA NA C20orf197 8404 473 chr20 58691307 58694209 58692225 N NA LOC284757 LOC284757 IMR90 Hi-C 24141950 LOC284757 19339 474 chr20 61199336 61202190 61200591 N NA NA RPS21,C20orf151,CABLES2,C20orf166,C20orf166-AS1,NTSR1,COL9A3,OGFR,C20orf20 IMR90 Hi-C 24141950 SLCO4A1 71607 475 chr20 62453069 62454417 62453869 N NA TPD52L2 ZBTB46,MIR1914,UCKL1-AS1,ZNF512B,UCKL1,TPD52L2,ABHD16B,DNAJC5 IMR90 Hi-C 24141950 TPD52L2 42164 476 chr20 62484116 62486662 62485458 Y PRIC285 TPD52L2,DNAJC5 SLC2A4RG,ZBTB46,LIME1,ZGPAT,TPD52L2,UCKL1,MIR1914,ARFRP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPD52L2 9919 477 chr20 6469629 6471691 6470568 N NA NA NA NA NA NA CRLS1 482890 478 chr20 9482190 9492719 9488339,9491422 N,N NA;NA LAMP5 PLCB4,LAMP5,PAK7 IMR90 Hi-C 24141950 LAMP5 2286 479 chr21 17054525 17055209 17054764 Y USP25 USP25 USP25 IMR90 Hi-C 24141950 USP25 47287 480 chr21 34481153 34482992 34482177 N NA OLIG1 C21orf62,OLIG1,IFNAR2 IMR90 Hi-C 24141950 OLIG1 38703 481 chr21 34583935 34585944 34584649 N NA IFNAR2 IFNAR1,TMEM50B,IFNGR2,IFNAR2,IL10RB,LOC100288432,CRYZL1 IMR90,K562 Hi-C,5C 24141950,22955621 IFNAR2 16287 482 chr21 34587595 34589471 34588075 Y NA IFNAR2,IL10RB IFNAR2,IL10RB,LOC100288432,TMEM50B,IFNGR2 IMR90,GM12878 Hi-C,5C 24141950,22955621 IFNAR2 12760 483 chr21 36900583 36901737 36901264 N NA NA RUNX1,LOC100506385 IMR90 Hi-C 24141950 RUNX1 478988 484 chr21 36935979 36937144 36936485 Y NA NA RUNX1,LOC100506385 IMR90 Hi-C 24141950 SETD4 495675 485 chr21 38933990 38937067 38936265 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 194131 486 chr21 40355653 40358687 40357586 Y ETS2 NA ETS2,WRB,LINC00114 IMR90,HELA Hi-C,5C 24141950,22955621 ETS2 178422 487 chr21 40375183 40379676 40377746 N NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 175764 488 chr21 40464916 40467382 40466499 Y ETS2 NA ETS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSMG1 88058 489 chr21 44765691 44767105 44766131 Y PKNOX1 NA LINC00313,HSF2BP,SIK1,LINC00319 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SIK1 79897 490 chr21 44781506 44782608 44782593 N NA NA HSF2BP,SIK1,LINC00319,CRYAA,LINC00313,RRP1B IMR90 Hi-C 24141950 SIK1 64394 491 chr21 45615700 45617456 45616405 Y PDXK,TRAPPC10,TRPM2,ICOSLG ICOSLG AIRE,PFKL,C21orf33,PWP2,ICOSLG MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ICOSLG 43378 492 chr21 45621244 45624868 45622703 N NA ICOSLG PFKL,AIRE MCF7 ChIA-PET 22265404 ICOSLG 35966 493 chr21 46969625 46971683 46970777 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 7240 494 chr21 46975172 46978665 46975741 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3,COL18A1,LINC00315,LOC642852 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 12787 495 chr22 23062474 23063723 23063353 N NA NA ZNF280B,GNAZ,RTDR1 IMR90 Hi-C 24141950 LOC96610 410011 496 chr22 23270097 23271903 23271160 Y NA NA MIR650 IMR90 Hi-C 24141950 BCR 250649 497 chr22 25798798 25802793 25801408,25800022 N,N NA;NA CRYBB2P1 SEZ6L,CRYBB2P1,LRP5L,ADRBK2,MYO18B IMR90 Hi-C 24141950 CRYBB2P1 41261 498 chr22 29207036 29209162 29207986 N NA CCDC117,XBP1 XBP1,CHEK2,HSCB,C22orf31,ZNRF3,KREMEN1,TTC28,TTC28-AS1,EMID1,CCDC117 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 XBP1 10476 499 chr22 29596266 29599586 29597956 N NA EMID1 NA NA NA NA EMID1 2367 500 chr22 41047407 41051704 41047800 Y NA MKL1 ST13,MKL1,MCHR1,ADSL,SLC25A17,DNAJB7,XPNPEP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 14717 501 chr22 41417084 41418976 41418402 N NA NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EP300 69638 502 chr22 42839221 42841404 42840433 N NA NFAM1 MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3,FAM109B,NAGA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAM1 10820 503 chr22 45059919 45060530 45060334 N NA PRR5-ARHGAP8 PNPLA3,PARVB,SAMM50,KIAA1644,LINC00229 IMR90 Hi-C 24141950 PRR5-ARHGAP8 37852 504 chr22 46392710 46396358 46393819 N NA LOC730668 C22orf40,PKDREJ,ATXN10,GTSE1,CN5H6.4,TRMU,C22orf26,LOC150381,MIRLET7BHG IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC730668 6138 505 chr22 46971437 46978942 46973910 N NA GRAMD4 TRMU,GRAMD4,CELSR1 IMR90 Hi-C 24141950 GRAMD4 43716 506 chr22 46983261 46993490 46989467,46984193 Y,N TBC1D22A,CERK,GRAMD4;NA GRAMD4 TRMU,GRAMD4,CELSR1 IMR90 Hi-C 24141950 GRAMD4 29168 507 chr22 46999577 47001932 47000251 N NA GRAMD4 CELSR1,GRAMD4 IMR90 Hi-C 24141950 GRAMD4 20726 508 chr22 47017731 47019075 47018486 N NA GRAMD4 GRAMD4 IMR90 Hi-C 24141950 GRAMD4 3583 509 chr22 49763897 49767470 49765300 Y NA NA NA NA NA NA C22orf34 283720 510 chr22 49855051 49857690 49856736 N NA NA NA NA NA NA C22orf34 193500 511 chr22 49859948 49861858 49860285 N NA NA NA NA NA NA C22orf34 189332 512 chr22 50241580 50245145 50242798 N NA BRD1,ZBED4 ZBED4,BRD1 MCF7 ChIA-PET 22265404 ZBED4 2352 513 chr3 128216292 128218553 128216580 Y EEFSEC,DNAJB8,GATA2,GATA2,GATA2 NA GATA2,C3orf27,RUVBL1,EEFSEC,DNAJB8,DNAJB8-AS1,LOC90246 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 C3orf27 76376 514 chr3 128310071 128311613 128311031 Y DNAJB8,RAB7A,GATA2,GATA2,GATA2 C3orf27 EEFSEC,GATA2,LOC90246 IMR90 Hi-C 24141950 C3orf27 15142 515 chr3 128399084 128401413 128400070 N NA RPN1,RAB7A RAB7A,RPN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPN1 29365 516 chr3 128593113 128594830 128593851 N NA ACAD9 NA NA NA NA ACAD9 3503 517 chr3 128948672 128949895 128949526 N NA CNBP,COPG1,C3orf37 KIAA1257,CCDC48,ISY1-RAB43,CNBP,COPG1,GP9,C3orf37 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 COPG1 18558 518 chr3 13492967 13494086 13493416 Y NA NUP210 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NUP210 31158 519 chr3 138551996 138555213 138553794 N NA NA PIK3CB IMR90 Hi-C 24141950 PIK3CB 73795 520 chr3 138633811 138635506 138634549 Y NA NA ESYT3,PIK3CB,MRPS22,MRAS,CEP70,FAIM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIK3CB 155610 521 chr3 151920864 151922459 151921474 N NA NA MBNL1,LOC401093 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MBNL1 63370 522 chr3 156891942 156894459 156892900 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 13460 523 chr3 166879434 166880641 166880127 N NA NA NA NA NA NA WDR49 490648 524 chr3 171695106 171695963 171695865 N NA NA PLD1,FNDC3B,TMEM212 IMR90 Hi-C 24141950 FNDC3B 61455 525 chr3 171697520 171699271 171698591 N NA NA TMEM212,PLD1,FNDC3B IMR90 Hi-C 24141950 FNDC3B 58147 526 chr3 171701965 171703666 171702901 N NA NA PLD1,FNDC3B,TMEM212 IMR90 Hi-C 24141950 FNDC3B 53752 527 chr3 172467893 172469524 172468810 N NA NCEH1,ECT2 NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 2774 528 chr3 174158465 174159695 174159064 N NA NA NAALADL2 IMR90 Hi-C 24141950 ECT2 1686167 529 chr3 177075218 177077474 177076369 Y TBL1XR1 NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 160170 530 chr3 177308552 177309996 177309327 Y NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 393504 531 chr3 17979231 17984380 17981113,17982629 N,N NA;NA NA NA NA NA NA LOC339862 70767 532 chr3 18023330 18026454 18024630 N NA LOC339862 NA NA NA NA LOC339862 28693 533 chr3 184404782 184405244 184404948 N NA MAGEF1 NA NA NA NA MAGEF1 24592 534 chr3 18483708 18488711 18486770,18485187 N,Y NA;NA SATB1 NA NA NA NA SATB1 3443 535 chr3 187491406 187492473 187491805 N NA BCL6 BCL6,LPP IMR90 Hi-C 24141950 BCL6 27893 536 chr3 188664017 188667891 188666384 N NA NA LPP,BCL6,LPP-AS2 IMR90 Hi-C 24141950 LPP-AS2 792141 537 chr3 193788062 193790223 193788773 N NA NA HES1,LOC647323,LOC100131551 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HES1 63708 538 chr3 194722860 194725103 194723952 N NA NA LOC100507391,LSG1,XXYLT1,FAM43A,APOD,PPP1R2 IMR90 Hi-C 24141950 XXYLT1 266792 539 chr3 194760144 194761914 194760971 N NA NA XXYLT1,LOC100507391 IMR90 Hi-C 24141950 XXYLT1 229981 540 chr3 195822917 195824502 195823534 N NA TFRC LOC401109,TFRC,PCYT1A,LRRC33 IMR90 Hi-C 24141950 TFRC 13885 541 chr3 196346842 196348588 196347175 Y PCYT1A,RNF168,SENP5,LRRC33 LRRC33 WDR53,FBXO45,SENP5,UBXN7,LRRC33 IMR90 Hi-C 24141950 LRRC33 18068 542 chr3 196349693 196353250 196352027 Y LRRC33 LRRC33 WDR53,FBXO45,SENP5,UBXN7,LRRC33,C3orf43,PAK2 IMR90 Hi-C 24141950 LRRC33 13406 543 chr3 196357666 196362275 196360387 N NA LRRC33 FBXO45,SENP5,C3orf43,PAK2,LRRC33,CEP19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC33 4381 544 chr3 197183049 197184591 197183616 N NA NA BDH1,DLG1,LOC100507086 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLG1 157602 545 chr3 27524594 27526585 27525240 N NA NA NEK10,SLC4A7 IMR90 Hi-C 24141950 CMC1 756539 546 chr3 41158551 41159482 41159238 Y NA NA ULK4 IMR90 Hi-C 24141950 CTNNB1 81460 547 chr3 42054449 42057276 42055398 N NA NA TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 75470 548 chr3 44551402 44553053 44552197 N NA ZNF445 ZNF445 K562 ChIA-PET 22265404 ZNF445 32240 549 chr3 4515211 4517314 4516676 Y NA SUMF1,ITPR1 SUMF1 MCF7,K562 ChIA-PET 22265404 SUMF1 6245 550 chr3 46263106 46263979 46263283 N NA CCR1 CCR1 IMR90 Hi-C 24141950 CCR1 13274 551 chr3 46331364 46332529 46332100 N NA NA CCR3 IMR90 Hi-C 24141950 CCR2 62706 552 chr3 46337787 46343495 46339936,46342538 N,N NA;NA NA CCR9,CCR3,CCR2,CCR5,CCRL2,SLC6A20,LOC100132146,FYCO1 IMR90 Hi-C 24141950 CCR2 51740 553 chr3 52219541 52220477 52220162 Y ALAS1,ALAS1 POC1A,ALAS1,TLR9 RPL29,DUSP7,POC1A,ALAS1,WDR82,PPM1M,DNAH1,BAP1 IMR90 Hi-C 24141950 ALAS1 11622 554 chr3 53176654 53177892 53177224 N NA RFT1,PRKCD RFT1,PRKCD,TKT IMR90 Hi-C 24141950 RFT1 12184 555 chr3 73159592 73160733 73159852 Y EBLN2 NA PDZRN3,CACNA1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 113473 556 chr3 75184811 75187157 75185549 N NA NA NA NA NA NA FAM86DP 297109 557 chr3 75228174 75230496 75229749 N NA NA NA NA NA NA FAM86DP 253770 558 chr4 115067985 115069187 115068614 N NA NA NA NA NA NA LARP7 1509865 559 chr4 123072609 123074308 123073788 N NA NA KIAA1109 K562 ChIA-PET 22265404 CCNA2 327521 560 chr4 129307643 129308730 129308243 N NA NA PGRMC2,PHF17,LARP1B,SCLT1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PGRMC2 97659 561 chr4 140096837 140100619 140099185 N NA NA ELF2,NAA15,C4orf49 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAA15 122057 562 chr4 141158530 141159950 141159038 N NA NA MAML3,MGST2,SCOC,LOC100129858 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ELMOD2 285362 563 chr4 141173760 141174331 141173916 N NA NA MGST2,MAML3,SCOC,LOC100129858 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ELMOD2 270981 564 chr4 1579471 1582273 1581735 N NA NA RNF212,TMED11P,KIAA1530,FAM53A,SLBP,CTBP1,C4orf42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM53A 103715 565 chr4 174336850 174338103 174337504 Y SAP30 NA HMGB2,GALNT7,SAP30 MCF7,K562 ChIA-PET 22265404 HMGB2 81255 566 chr4 180757206 180759085 180757646 N NA NA NA NA NA NA AGA 2393549 567 chr4 180977547 180981901 180979899 Y NA NA NA NA NA NA AGA 2613890 568 chr4 180991017 180995573 180992337 N NA NA NA NA NA NA AGA 2627360 569 chr4 181009490 181011811 181010062 N NA NA NA NA NA NA AGA 2645833 570 chr4 181019855 181024545 181022254 N NA NA NA NA NA NA AGA 2656198 571 chr4 184319326 184320320 184319752 N NA CDKN2AIP WWC2,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 45469 572 chr4 185457605 185459581 185458751 N NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 61879 573 chr4 26274584 26276671 26275323 Y RBPJ,RBPJ RBPJ NA NA NA NA RBPJ 44661 574 chr4 26858875 26860181 26859275 N NA NA NA NA NA NA RBPJ 537543 575 chr4 30718702 30719889 30719042 Y PCDH7,PCDH7 NA NA NA NA NA RBPJ 4397370 576 chr4 3291664 3297148 3294223 N NA NA RGS12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HTT 215256 577 chr4 38319879 38321183 38320853 Y NA NA FLJ13197,KLF3,TBC1D1,TLR10 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF3 344607 578 chr4 62065920 62069035 62067174 N NA NA NA NA NA NA IGFBP7 4089369 579 chr4 6754543 6755601 6755038 Y NA MRFAP1L1,CNO,KIAA0232 LOC100129931,TADA2B,KIAA0232,TBC1D14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KIAA0232 28858 580 chr4 84118229 84119915 84119401 Y THAP9,HPSE,HPSE,HPSE,COQ2,PLAC8 NA PLAC8,COPS4,COQ2 IMR90 Hi-C 24141950 PLAC8 82318 581 chr4 84158235 84163230 84161832 N NA COQ2 NA NA NA NA COQ2 42837 582 chr4 84291298 84292086 84291753 N NA NA NA NA NA NA HELQ 84939 583 chr4 9154007 9155928 9154880 Y NA NA NA NA NA NA METTL19 711475 584 chr5 1003830 1006933 1005028 N NA LOC100506688,NKD2 NA NA NA NA NKD2 2235 585 chr5 114192454 114195053 114193630 N NA NA NA NA NA NA PGGT1B 403516 586 chr5 134526642 134527582 134526920 N NA NA CATSPER3,PCBD2,H2AFY,PITX1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PITX1 156678 587 chr5 134745620 134748431 134746558 N NA H2AFY,C5orf20,TIFAB H2AFY,C5orf20,LOC340073,PITX1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H2AFY 10043 588 chr5 134790746 134794015 134792042 Y H2AFY C5orf20,TIFAB C5orf20,H2AFY K562 ChIA-PET 22265404 TIFAB 2657 589 chr5 134878810 134880549 134879638 Y NA CXCL14 NA NA NA NA CXCL14 34420 590 chr5 138867479 138868699 138868096 N NA TMEM173 DNAJC18,SPATA24,UBE2D2,SLC23A1,TMEM173 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 5136 591 chr5 138897198 138898383 138897619 Y MATR3,MATR3,DNAJC18,PSD2 TMEM173,UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 34855 592 chr5 139486360 139487928 139487373 N NA PURA,IGIP NRG2,CYSTM1 IMR90 Hi-C 24141950 PURA 5780 593 chr5 14011461 14012146 14011735 N NA NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIO 131683 594 chr5 142985039 142986215 142985299 N NA NA NR3C1,ARHGAP26,HMHB1 IMR90 Hi-C 24141950 YIPF5 564063 595 chr5 149865361 149866468 149866190 N NA RPS14 NDST1,RBM22,MYOZ3,SYNPO IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RPS14 36042 596 chr5 159894487 159896019 159894971 N NA SLU7,PTTG1 NA NA NA NA PTTG1 45622 597 chr5 179340677 179341582 179341310 N NA TBC1D9B TBC1D9B,RNF130 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TBC1D9B 5821 598 chr5 18744889 18746462 18745778 N NA NA NA NA NA NA BASP1 1527139 599 chr5 2013037 2014704 2013792 N NA NA NA NA NA NA NDUFS6 211541 600 chr5 36724810 36725570 36725228 N NA NA NIPBL,LOC646719 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC1A3 118353 601 chr5 40409688 40410561 40410185 Y PTGER4,PRKAA1 NA PTGER4 IMR90 Hi-C 24141950 PTGER4 269471 602 chr5 49740288 49742126 49741439 N NA EMB NA NA NA NA EMB 3054 603 chr5 49951860 49958013 49954083,49955153 N,N NA;NA PARP8 NA NA NA NA PARP8 3720 604 chr5 56059322 56060495 56059866 N NA NA MAP3K1 MCF7,IMR90,HELA ChIA-PET,Hi-C,5C 22265404,24141950,22955621 MAP3K1 50405 605 chr5 57839666 57840744 57840247 Y GAPT NA NA NA NA NA PLK2 83700 606 chr5 81146463 81149148 81147795 Y NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPS23 425087 607 chr5 95170582 95171923 95170868 Y GLRX,ELL2 GLRX RHOBTB3,GLRX,ARSK,RFESD,SPATA9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLRX 12005 608 chr6 106439760 106443795 106442586 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 90400 609 chr6 109557561 109559306 109558406 N NA NA CD164,CCDC162P K562 ChIA-PET 22265404 SESN1 141853 610 chr6 111179883 111181199 111180635 Y CDK19,SLC16A10,AMD1,AMD1 CDK19,AMD1 CDK19,AMD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMD1 14788 611 chr6 119255485 119256642 119256026 N NA ASF1A,MCM9 NA NA NA NA MCM9 2582 612 chr6 12008231 12009890 12009313 N NA NA ADTRP IMR90 Hi-C 24141950 TMEM170B 469720 613 chr6 135497105 135498810 135497932 N NA MYB AHI1,BCLAF1 IMR90 Hi-C 24141950 MYB 3643 614 chr6 138288877 138290283 138289358 Y TNFAIP3 NA NA NA NA NA TNFAIP3 100296 615 chr6 139854370 139855924 139855582 N NA NA LOC100132735,CITED2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CITED2 158585 616 chr6 139947122 139948598 139947997 Y NA NA CITED2 K562 ChIA-PET 22265404 CITED2 251337 617 chr6 14210712 14212022 14211415 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD83 93225 618 chr6 144536219 144538319 144537067 N NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 UTRN 74554 619 chr6 144605800 144608497 144606312 N NA UTRN UTRN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 UTRN 4376 620 chr6 14728549 14729788 14728964 Y NA NA DTNBP1,JARID2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 JARID2 516739 621 chr6 14910175 14912917 14911207 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 333610 622 chr6 14921390 14923932 14922390 Y JARID2 NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 322595 623 chr6 1554219 1556075 1555192 N NA NA MYLK4,LOC100508120,EXOC2,GMDS IMR90 Hi-C 24141950 LOC100508120 689912 624 chr6 157007717 157009473 157008500 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 89591 625 chr6 157039960 157041551 157040659 N NA NA ARID1B,MIR4466 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ARID1B 57513 626 chr6 158652449 158654768 158653187 N NA NA TULP4,TMEM181,DYNLT1,SYTL3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF2H5 63070 627 chr6 159290104 159291560 159290811 N NA EZR OSTCP1,C6orf99,EZR K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZR 49648 628 chr6 164132607 164135328 164133842 N NA NA NA NA NA NA QKI 296932 629 chr6 165595337 165597723 165596057 N NA NA NA NA NA NA SFT2D1 1158268 630 chr6 166649849 166651104 166650360 N NA NA NA NA NA NA SFT2D1 104887 631 chr6 166672299 166673515 166673028 N NA NA LOC100289495 IMR90 Hi-C 24141950 SFT2D1 82476 632 chr6 167506351 167508838 167508047 N NA NA NA NA NA NA FGFR1OP 93535 633 chr6 169512132 169514051 169512797 N NA NA WDR27,THBS2 IMR90 Hi-C 24141950 WDR27 588108 634 chr6 170403211 170405140 170404025 N NA NA NA NA NA NA FAM120B 210704 635 chr6 170476041 170478809 170477534 N NA NA NA NA NA NA FAM120B 137035 636 chr6 20320002 20320631 20320330 N NA NA E2F3 IMR90 Hi-C 24141950 E2F3 81506 637 chr6 21587107 21589878 21588332 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 4094 638 chr6 24743222 24744086 24743820 N NA C6orf62,GMNN GMNN,CMAHP,C6orf62 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C6orf62 23819 639 chr6 26304919 26305795 26305199 Y NA NA HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 59603 640 chr6 26577123 26578104 26577505 N NA HMGN4,ABT1 ABT1,HIST1H2BK,HIST1H4I,HIST1H2BG,HIST1H2AE,HCG11,HMGN4 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ABT1 19067 641 chr6 27144748 27147634 27145700 Y FKSG83,ZNF184,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH HIST1H2BK HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HIST1H2BK 30111 642 chr6 27486371 27487629 27487229 N NA ZNF184 LOC100131289,HIST1H2BJ,HIST1H4I,HIST1H2BK,HIST1H2AG,HIST1H2AH,MIR3143,PRSS16 IMR90 Hi-C 24141950 ZNF184 45474 643 chr6 28834082 28835181 28834394 N NA NA NA NA NA NA TRIM27 56587 644 chr6 30482648 30484845 30484244 N NA HLA-E,PRR3,GNL1 HLA-E,PPP1R10,MRPS18B,ABCF1,PRR3,GNL1 MCF7,K562 ChIA-PET 22265404 HLA-E 25465 645 chr6 3063861 3064912 3064342 N NA RIPK1 NQO2 K562 ChIA-PET 22265404 RIPK1 12146 646 chr6 3068208 3070309 3068886 N NA RIPK1 LOC100507194,WRNIP1 K562 ChIA-PET 22265404 RIPK1 6749 647 chr6 33791922 33792653 33792409 Y CUTA,C6orf1 LEMD2 IP6K3,GRM4,RPS10-NUDT3,C6orf106,LEMD2,LOC100507584,MIR1275 IMR90 Hi-C 24141950 LEMD2 35016 648 chr6 34191419 34192403 34191826 Y C6orf1,HMGA1 HMGA1,C6orf1 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 HMGA1 12174 649 chr6 35699078 35700621 35699785 N NA FKBP5 ARMC12 MCF7 ChIA-PET 22265404 FKBP5 2718 650 chr6 37018066 37020428 37018622 N NA FGD2 CPNE5,C6orf89,FGD2,PIM1,TMEM217,TBC1D22B IMR90 Hi-C 24141950 FGD2 44643 651 chr6 41338987 41339769 41339352 N NA NA NA NA NA NA FOXP4 174395 652 chr6 42748373 42752571 42751049 N NA TBCC,KIAA0240 KIAA0240,UBR2,RPL7L1,PTCRA,KLHDC3,MEA1,PPP2R5D,PRPH2,TBCC,ATP6V0CP3,C6orf226 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBCC 34489 653 chr6 44040787 44042700 44041200 N NA NA POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,MRPS18A,HSP90AB1,XPO5,C6orf223,CAPN11,TMEM63B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL14 52491 654 chr6 44585249 44587322 44586386 N NA NA CLIC5,RUNX2,SUPT3H IMR90 Hi-C 24141950 CDC5L 229998 655 chr6 44594186 44596783 44595038 Y AARS2 NA CLIC5,SUPT3H,RUNX2 IMR90 Hi-C 24141950 CDC5L 238935 656 chr6 5025778 5027142 5026662 N NA RPP40 LYRM4,RPP40,CDYL IMR90 Hi-C 24141950 RPP40 21507 657 chr6 53223478 53224871 53224315 Y NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 9501 658 chr6 64345431 64346665 64345941 N NA NA PHF3,EYS,PTP4A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PTP4A1 63511 659 chr6 6711476 6714643 6713331 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 LY86 122542 660 chr6 6722605 6726959 6726333,6724065 N,N NA;NA NA RREB1,CAGE1,DSP IMR90 Hi-C 24141950 LY86 133671 661 chr6 6749649 6750786 6750398 Y LY86,RREB1,RREB1 NA RREB1,SSR1 IMR90 Hi-C 24141950 LY86 160715 662 chr6 6798507 6800417 6799084 N NA NA RREB1 IMR90 Hi-C 24141950 LY86 209573 663 chr6 68596480 68598960 68598194 N NA NA NA NA NA NA C6orf57 2677665 664 chr6 6884888 6888640 6886103 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 219190 665 chr6 6915448 6917591 6916485 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 190239 666 chr6 6941908 6944056 6943265 N NA NA NA NA NA NA RREB1 163774 667 chr6 7016032 7017083 7016680 N NA NA NA NA NA NA RREB1 90747 668 chr6 7051372 7053219 7052349 N NA NA RREB1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RREB1 54611 669 chr6 710777 712134 711196 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 17668 670 chr6 89781763 89783841 89782858 N NA PNRC1 NA NA NA NA PNRC1 6588 671 chr7 100433604 100435378 100435111 N NA EPHB4,SLC12A9,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHB4 8461 672 chr7 100893793 100896347 100895606 N NA ZNHIT1,PLOD3,CLDN15,FIS1 NA NA NA NA FIS1 5422 673 chr7 101360615 101362673 101361310 Y CUX1,CUX1 NA CUX1,EMID2,SH2B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 96511 674 chr7 113691626 113693320 113692310 N NA FOXP2 NA NA NA NA FOXP2 33045 675 chr7 118464 120185 119464 Y NA NA FAM20C IMR90 Hi-C 24141950 FAM20C 72784 676 chr7 127761079 127763840 127761949 N NA NA SND1,MIR129-1 IMR90 Hi-C 24141950 MGC27345 183976 677 chr7 128170344 128173029 128171369,128171999 Y,N NA;NA NA IMPDH1,HILPDA,METTL2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 METTL2B 53561 678 chr7 154997959 154998551 154998256 N NA NA INSIG1,LOC202781,PAXIP1 K562 ChIA-PET 22265404 INSIG1 90935 679 chr7 155174018 155175876 155174757 N NA NA PAXIP1,LOC100132707 IMR90 Hi-C 24141950 INSIG1 84532 680 chr7 1552402 1555742 1553132 Y ZFAND2A,MAFK INTS1,MAFK MICALL2,INTS1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 INTS1 8384 681 chr7 155382329 155384604 155383676 N NA NA LMBR1,CNPY1,RBM33,LOC100132707 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM33 52599 682 chr7 157094590 157096025 157095058 N NA DNAJB6 UBE3C,DNAJB6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 33686 683 chr7 25895428 25898631 25896799 Y NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 293216 684 chr7 26140604 26142162 26141198 Y SNX10,SNX10,SNX10,HNRNPA2B1 NFE2L3 NA NA NA NA NFE2L3 49685 685 chr7 26437725 26439557 26438488 N NA NA LOC441204 MCF7,K562 ChIA-PET 22265404 SNX10 106210 686 chr7 35296865 35298111 35297316 N NA TBX20 NA NA NA NA TBX20 3154 687 chr7 38320351 38322317 38321731 N NA TARP NA NA NA NA TARP 7103 688 chr7 38333190 38346254 38341972,38339838,38344376 N,N,N NA;NA;NA TARP LOC100506776 IMR90 Hi-C 24141950 TARP 19942 689 chr7 38348659 38359768 38350678,38357283,38355049 N,N,Y NA;NA;TARP TARP LOC100506776,STARD3NL IMR90 Hi-C 24141950 TARP 35411 690 chr7 38374262 38376322 38375101 N NA NA LOC100506776 K562 ChIA-PET 22265404 TARP 61014 691 chr7 41498818 41500088 41499376 N NA NA C7orf10,INHBA,LOC285954 IMR90 Hi-C 24141950 C7orf11 1324567 692 chr7 41848323 41851579 41849811 N NA NA LOC285954,C7orf10 IMR90 Hi-C 24141950 C7orf25 1100110 693 chr7 41919718 41923908 41921396 Y INHBA NA LOC285954,C7orf10,INHBA IMR90 Hi-C 24141950 C7orf25 1027781 694 chr7 41925067 41926335 41925980 Y INHBA NA LOC285954,C7orf10,INHBA IMR90 Hi-C 24141950 C7orf25 1025354 695 chr7 47293106 47294471 47293732 N NA NA NA NA NA NA TNS3 327271 696 chr7 50307191 50309623 50308698 N NA IKZF1 NA NA NA NA IKZF1 34755 697 chr7 50313428 50314677 50314117 N NA IKZF1 IKZF1 IMR90 Hi-C 24141950 IKZF1 29701 698 chr7 50320737 50323889 50322659 N NA IKZF1 NA NA NA NA IKZF1 20489 699 chr7 5594004 5596913 5595851 Y CCZ1,ACTB FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 23772 700 chr7 55954447 55956086 55955262 N NA NA NA NA NA NA MRPS17 63525 701 chr7 5609049 5610474 5609562 Y SLC29A4,TNRC18,FBXL18,FSCN1 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FSCN1 21962 702 chr7 6120641 6121787 6121185 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 21781 703 chr7 63767274 63768439 63767783 N NA NA NA NA NA NA ZNF680 255066 704 chr7 64465947 64467406 64466864 N NA ZNF117,CCT6P3 ZNF117,CCT6P3 MCF7 ChIA-PET 22265404 ZNF117 14533 705 chr7 65956935 65959576 65958647 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 RABGEF1 246067 706 chr7 65970083 65971510 65971110 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 RABGEF1 234133 707 chr7 66056423 66058124 66057356 N NA NA KCTD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RABGEF1 147519 708 chr7 66144411 66148042 66147068 N NA NA KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 RABGEF1 57601 709 chr7 6768608 6770159 6769436 N NA ZNF12 ZNF12 K562 ChIA-PET 22265404 ZNF12 22042 710 chr7 73323402 73324560 73323775 Y NA NA NA NA NA NA ABHD11 170212 711 chr7 75795366 75797042 75795998 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 117973 712 chr7 75993269 75994486 75993831 Y NA YWHAG YWHAG MCF7 ChIA-PET 22265404 YWHAG 4927 713 chr7 90224780 90226299 90225647 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CLDN12 192132 714 chr8 101347857 101349471 101348672 N NA RNF19A NA NA NA NA RNF19A 25530 715 chr8 101449903 101450946 101450409 Y RNF19A NA SPAG1 IMR90 Hi-C 24141950 ANKRD46 121066 716 chr8 102138124 102139206 102138905 N NA NA YWHAZ,FLJ42969,ZNF706,PABPC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 78754 717 chr8 103612306 103613918 103613453 Y KLF10,KLF10 NA UBR5,KLF10,ODF1,AZIN1,RRM2B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 54065 718 chr8 103800825 103802227 103801606 Y NA NA KLF10,UBR5,ODF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AZIN1 74170 719 chr8 103806357 103808164 103807593 N NA NA KLF10,UBR5,ODF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AZIN1 68233 720 chr8 11735416 11736615 11736292 N NA CTSB CTSB,BLK,FDFT1,FAM167A,GATA4 IMR90 Hi-C 24141950 CTSB 9770 721 chr8 123618730 123619630 123619139 N NA NA HAS2,SNTB1 IMR90 Hi-C 24141950 ZHX2 174271 722 chr8 130547127 130549150 130548617 N NA NA PVT1,MYC IMR90 Hi-C 24141950 LOC728724 293641 723 chr8 130557117 130562793 130560167 Y NA NA NA NA NA NA LOC728724 303631 724 chr8 130565458 130568148 130566883 Y FAM49B NA NA NA NA NA LOC728724 311972 725 chr8 130593146 130596566 130594136 N NA NA NA NA NA NA LOC728724 339660 726 chr8 130605261 130606572 130606275 N NA NA NA NA NA NA LOC728724 351775 727 chr8 130677250 130679908 130678328 N NA NA PVT1 IMR90 Hi-C 24141950 FAM49B 348989 728 chr8 130691351 130696899 130694361,130696029,130691503 N,N,N NA;NA;NA NA PVT1,MYC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM49B 331998 729 chr8 135843138 135846086 135844694 N NA NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFAT 117846 730 chr8 141473473 141475295 141474728 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 TRAPPC9 4795 731 chr8 142093786 142097751 142096608,142094654 Y,N EIF2C2,SLC45A4,DENND3;NA DENND3 PTK2,DENND3,EIF2C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 40969 732 chr8 142098397 142101275 142099932 Y EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 37445 733 chr8 142103901 142105257 142104561 N NA DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 33463 734 chr8 142113540 142115944 142115074 N NA DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 22776 735 chr8 142129016 142132373 142131495,142129950 Y,Y EIF2C2,SLC45A4,DENND3;EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3,SLC45A4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 6347 736 chr8 142275272 142277314 142276335 N NA SLC45A4 PTK2,DENND3,SLC45A4 IMR90 Hi-C 24141950 SLC45A4 36599 737 chr8 142335862 142340123 142337199,142339611 N,N NA;NA GPR20 PTK2,DENND3 IMR90 Hi-C 24141950 GPR20 37242 738 chr8 142383372 142388900 142384769 N NA GPR20,PTP4A3 NA NA NA NA GPR20 6007 739 chr8 142400621 142401818 142400786 N NA GPR20,PTP4A3 FLJ43860,PTP4A3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR20 23256 740 chr8 143529637 143535658 143534458 Y LYNX1,LYNX1,TSNARE1,BAI1 TSNARE1 BAI1,TSNARE1 MCF7 ChIA-PET 22265404 TSNARE1 45094 741 chr8 144288167 144290579 144290048 N NA ZFP41 NA NA NA NA ZFP41 38530 742 chr8 20160954 20162405 20161527 N NA NA ATP6V1B2,LZTS1 IMR90 Hi-C 24141950 ATP6V1B2 106250 743 chr8 22831000 22832345 22831698 N NA NA BIN3,PEBP4,LOC254896,TNFRSF10B,RHOBTB2,C8orf58,KIAA1967 IMR90 Hi-C 24141950 LOC286059 93397 744 chr8 28257954 28260346 28259169 N NA ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 13977 745 chr8 29385802 29387712 29387182 N NA NA C8orf75,DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM66 552937 746 chr8 30768760 30770234 30769835 Y NA NA TEX15,WRN,PPP2CB,PURG IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP2CB 98408 747 chr8 38523497 38524697 38524118 N NA NA C8orf86,FGFR1,WHSC1L1,RNF5P1,PPAPDC1B IMR90 Hi-C 24141950 FGFR1 197145 748 chr8 49426104 49427847 49427222 Y SNAI2 NA SNAI2 IMR90 Hi-C 24141950 UBE2V2 505109 749 chr8 55181134 55182310 55181585 Y ATP6V1H,ATP6V1H NA NA NA NA NA MRPL15 133353 750 chr8 58359954 58361055 58360688 N NA NA NA NA NA NA IMPAD1 453524 751 chr8 59583945 59584538 59584500 N NA NSMAF NSMAF,SDCBP K562 ChIA-PET 22265404 NSMAF 11541 752 chr8 61563444 61565861 61564666 N NA CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 25463 753 chr8 61822230 61823472 61822956 N NA NA CHD7 IMR90 Hi-C 24141950 CHD7 230906 754 chr8 61824032 61824912 61824542 Y CHD7 NA CHD7 IMR90 Hi-C 24141950 CHD7 232708 755 chr8 66860006 66862219 66860996 N NA NA PDE7A MCF7 ChIA-PET 22265404 PDE7A 106037 756 chr8 66893529 66894855 66894249 Y PDE7A NA DNAJC5B IMR90 Hi-C 24141950 PDE7A 139560 757 chr8 72648977 72650575 72650011 N NA NA NA NA NA NA LACTB2 1067530 758 chr8 80695693 80696730 80696146 N NA NA MRPS28,HEY1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPS28 245776 759 chr9 103173057 103174621 103174077 Y NA NA C9orf30-TMEFF1,TEX10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TEX10 57798 760 chr9 103188842 103190029 103189477 N NA NA C9orf30-TMEFF1,NR4A3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TEX10 73583 761 chr9 107753582 107754531 107753821 N NA NA ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NIPSNAP3A 243613 762 chr9 107952691 107958122 107954099,107957269 Y,N FSD1L,FSD1L,ABCA1;NA SLC44A1 ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC44A1 48807 763 chr9 110522241 110524042 110523090 N NA NA KLF4 MCF7 ChIA-PET 22265404 KLF4 270194 764 chr9 123835427 123841849 123836677 N NA CNTRL CNTRL,TRAF1,MEGF9,FBXW2,C5,RAB14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CNTRL 8725 765 chr9 126958964 126960336 126959674 Y DENND1A NA NEK6,DENND1A IMR90 Hi-C 24141950 NEK6 59549 766 chr9 126977793 126981980 126981172 Y DENND1A,NEK6 NEK6 DENND1A,NEK6,PSMB7,LHX2 IMR90 Hi-C 24141950 NEK6 37905 767 chr9 127004314 127006054 127005072 N NA NEK6 NEK6,DENND1A IMR90 Hi-C 24141950 NEK6 13831 768 chr9 129485095 129487168 129485912 N NA NA NA NA NA NA ZBTB43 80117 769 chr9 130006985 130007941 130007513 N NA NA NA NA NA NA ZNF79 178712 770 chr9 132105659 132107120 132106379 N NA NA IER5L,C9orf106,LOC100506190,C9orf50,ASB6,METTL11A,PPP2R4 H1ESC,HELA,IMR90,MCF7 5C,Hi-C,ChIA-PET 22955621,24141950,22265404 LOC100506190 143819 771 chr9 132143047 132147484 132146065 Y FAM73B,C9orf106,USP20,USP20,TOR1B,C9orf78,ASB6 NA LOC100506190,C9orf50,METTL11A,C9orf106,SH3GLB2,PPP2R4,CRAT,IER5L,PTGES IMR90,K562,GM12878,HELA,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 LOC100506190 103455 772 chr9 132174466 132177486 132175867 N NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 73453 773 chr9 132221997 132223961 132222980 N NA LOC100506190 PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 26978 774 chr9 132243966 132245414 132245182 N NA LOC100506190 NA NA NA NA LOC100506190 5525 775 chr9 134247907 134250084 134248939 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 55393 776 chr9 134268619 134271529 134269537 N NA PRRC2B PRRC2B,NUP214,FAM78A,PPAPDC3 IMR90 Hi-C 24141950 PRRC2B 33948 777 chr9 137107100 137108990 137107825 N NA NA BRD3,RNU6ATAC,RXRA,COL5A1 IMR90 Hi-C 24141950 WDR5 105890 778 chr9 137117290 137119092 137118171 N NA NA RXRA MCF7 ChIA-PET 22265404 RXRA 99224 779 chr9 139481210 139483193 139481709 Y NA NOTCH1 MIR4674,NOTCH1,SEC16A,C9orf163,EGFL7,SNORA43,SNHG7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NOTCH1 40972 780 chr9 139507911 139523371 139512197,139514485,139518156 N,Y,N NA;CARD9,SEC16A,NOTCH1,UAP1L1,FUT7;NA NA MIR4674,NOTCH1,INPP5E,SEC16A,C9orf163,EGFL7,GPSM1,DNLZ IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 AGPAT2 58540 781 chr9 139538771 139539843 139539115 N NA AGPAT2 SEC16A,C9orf163 MCF7,K562 ChIA-PET 22265404 AGPAT2 42068 782 chr9 139591653 139593324 139592301 N NA AGPAT2,FAM69B,SNHG7 NA NA NA NA AGPAT2 9742 783 chr9 139595409 139596183 139595786 N NA AGPAT2,FAM69B,SNHG7 SNORA43,SNHG7 MCF7 ChIA-PET 22265404 FAM69B 10841 784 chr9 19229755 19232053 19230409 N NA NA DENND4C IMR90 Hi-C 24141950 PLIN2 102151 785 chr9 21081770 21082495 21082233 Y NA NA NA NA NA NA KLHL9 252934 786 chr9 2241807 2243222 2242514 N NA NA FLJ35024,VLDLR,KIAA0020,SMARCA2 IMR90 Hi-C 24141950 SMARCA2 226465 787 chr9 2286970 2289535 2288522 N NA NA NA NA NA NA SMARCA2 271628 788 chr9 2291063 2293595 2292296 N NA NA NA NA NA NA SMARCA2 275721 789 chr9 27588783 27590249 27589642 N NA C9orf72 NA NA NA NA C9orf72 14919 790 chr9 36485944 36489102 36487743 N NA NA RNF38 IMR90 Hi-C 24141950 MELK 83757 791 chr9 36765314 36766467 36766154 Y RNF38,RNF38 NA MELK IMR90 Hi-C 24141950 MELK 192455 792 chr9 66454538 66459407 66457766 N NA NA NA NA NA NA FXN 5191072 793 chr9 6680459 6683418 6681481 Y UHRF2,KDM4C NA KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 74223 794 chr9 73033309 73036638 73034510 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 3736 795 chr9 79188718 79190030 79189460 Y NA NA NA NA NA NA GNAQ 1456189 796 chr9 79190671 79191717 79191373 Y NA NA NA NA NA NA GNAQ 1454502 797 chr9 79194728 79195533 79195377 N NA NA NA NA NA NA GNAQ 1450686 798 chr9 90691092 90691910 90691487 N NA NA SPIN1,NXNL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDK20 101397 799 chr9 91392394 91393369 91392970 Y NA NA SHC3,MIR4289,LOC286238,S1PR3,NXNL2,CKS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 S1PR3 212993 800 chr9 91536619 91539806 91538687 Y SECISBP2,S1PR3,C9orf47 NA LOC286238,S1PR3,SHC3 IMR90 Hi-C 24141950 S1PR3 66556 801 chr9 93736265 93739648 93737749 N NA NA ROR2,LOC100129316,AUH,MIR3910-2,MIR3910-1 IMR90 Hi-C 24141950 SYK 172253 802 chr9 93924190 93925392 93925258 N NA NA AUH,LOC100129316,NFIL3 IMR90 Hi-C 24141950 AUH 198814 803 chr9 96720202 96721942 96721279 N NA BARX1 BARX1 MCF7 ChIA-PET 22265404 BARX1 2594 804 chr9 98900758 98902949 98901965 N NA NA FBP1,C9orf102,PTCH1,LOC158435,LOC158434,LINC00092,FANCC IMR90 Hi-C 24141950 LINC00476 262499 805 chr9 98908746 98910009 98909481 N NA NA FBP1,C9orf102,PTCH1,LOC158435,LOC158434,LINC00092,FANCC IMR90 Hi-C 24141950 LINC00476 270487 806 chrM 2409 16570 13137,6012 N,N NA;NA NA NA NA NA NA NA -1 807 chrX 102213798 102215871 102214414 N NA NA NA NA NA NA BEX1 103297 808 chrX 102239128 102241793 102240227 N NA NA NA NA NA NA BEX1 77375 809 chrX 129090163 129092408 129091346 N NA NA UTP14A K562 ChIA-PET 22265404 UTP14A 50066 810 chrX 12968644 12969900 12969082 Y TMSB4X,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 23326 811 chrX 12972616 12975203 12974141 Y ATXN3L,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 18023 812 chrX 13096615 13097942 13097186 Y TLR7,TLR8,TMSB4X NA NA NA NA NA TMSB4X 103389 813 chrX 13105988 13106722 13106349 Y TLR7,TLR8,TMSB4X NA FAM9C IMR90 Hi-C 24141950 TMSB4X 112762 814 chrX 13107663 13112152 13109082,13110662 Y,Y TLR8,TMSB4X;TLR7,TLR8,TMSB4X NA TMSB4X MCF7 ChIA-PET 22265404 TMSB4X 114437 815 chrX 135991080 135992527 135991862 N NA RBMX RBMX K562,MCF7 ChIA-PET 22265404 RBMX 28141 816 chrX 139014079 139016496 139015404 N NA NA MIR505,ATP11C MCF7 ChIA-PET 22265404 RBMX 3051140 817 chrX 152675838 152677451 152676895 N NA ZFP92,TREX2 NA NA NA NA ZFP92 6330 818 chrX 18692638 18693870 18693243 Y PHKA2,CDKL5 NA NA NA NA NA PHKA2 308610 819 chrX 30604562 30612486 30608123,30611483 N,N NA;NA CXorf21 NA NA NA NA CXorf21 8529 820 chrX 30614826 30617385 30616557 N NA CXorf21 NA NA NA NA CXorf21 18793 821 chrX 39867813 39868828 39868333 N NA NA BCOR MCF7 ChIA-PET 22265404 BCOR 167754 822 chrX 39871221 39874427 39872621 Y NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 162155 823 chrX 40125971 40126931 40126619 N NA NA BCOR K562 ChIA-PET 22265404 BCOR 89389 824 chrX 40869386 40870282 40869768 N NA NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 74606 825 chrX 45615220 45618831 45618266 N NA NA MIR221,MIR222 IMR90 Hi-C 24141950 LOC401588 786097 826 chrX 45624765 45630216 45629806 N NA NA MIR222,MIR221 IMR90 Hi-C 24141950 LOC401588 774712 827 chrX 48533224 48537098 48534888 N NA WAS,SUV39H1 NA NA NA NA WAS 5088 828 chrX 48594942 48596805 48595912 N NA SUV39H1 SUV39H1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUV39H1 39811 829 chrX 54665654 54667646 54666015 Y NA NA ITIH6,MAGED2 MCF7 ChIA-PET 22265404 GNL3L 109010 830 chrX 64820733 64822607 64821601 Y MSN NA MSN IMR90 Hi-C 24141950 MSN 64904 831 chrX 65205712 65208419 65207291 N NA NA NA NA NA NA MSN 318201 832 chrX 78513858 78515287 78514712 Y P2RY10,GPR174 NA NA NA NA NA TAF9B 1118679