HACER - Search

Interpret GWAS risk SNPs or eQTL variants by exploring enhancer function:

SNP (rsID): e.g.: rs614367

Type:

Active in Cell: e.g.: MCF7

Chromatin Interaction in Cell/Tissue: e.g.: MCF7

Explore enhancer function by gene:

Gene symbol: e.g.: MYC

Active in Cell: e.g.: HCT116

Chromatin Interaction in Cell/Tissue: e.g.: HCT116

Search enhancers by region:

Region: e.g.: chr8:128,706,791-128,748,266

Active in Cell: e.g.: GM12878

Chromatin Interaction in Cell/Tissue: e.g.: GM12878

Enter a set of coordinates.

Paste/type coordinates here in bed format: Example

or, upload a bed file:

Enter a set of target genes to limit query results (optional).

Paste/type gene names here (one gene per line): Example

or, upload a txt file (one gene per line):

Select cell(s) enhancer active in to limit query results (optional).

Cell: e.g.: MCF7