chr1	839741	840250	839788	Y	NA	NA	NA	NA	NA	NA	NOC2L	52439	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	1005293	1005547	1005421	Y	HES4	RP11-465B22.3,C1orf159	NA	NA	NA	NA	RP11-465B22.3	12179	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	1283060	1283625	1283139	Y	NA	PUSL1,ACAP3,CPSF3L,GLTPD1,DVL1,MXRA8,AURKAIP1,CCNL2	NA	NA	NA	NA	DVL1	330	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	1840449	1840835	1840668	Y	SKI,ATAD3B,C1orf70,MIB2,MIB2,PRKCZ,GABRD	GNB1,TMEM52	NA	NA	NA	NA	TMEM52	7877	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	2162325	2162996	2162733	Y	TNFRSF14,SKI	C1orf86	NA	NA	NA	NA	C1orf86	20166	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	2380992	2381349	2381299	Y	NA	PEX10,PLCH2	PRDM16	IMR90	Hi-C	24141950	PLCH2	25573	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	3459907	3460197	3460078	Y	NA	NA	NA	NA	NA	NA	MEGF6	65862	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	6943772	6944262	6943813	Y	NA	NA	NA	NA	NA	NA	CAMTA1	100388	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	7764543	7764931	7764717	Y	PER3	NA	NA	NA	NA	NA	VAMP3	64398	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr1	8070132	8070398	8070299	Y	PER3,SLC45A1,ERRFI1	ERRFI1,RP11-431K24.1	NA	NA	NA	NA	ERRFI1	13970	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	8137301	8137521	8137361	Y	NA	NA	ERRFI1,PARK7,TNFRSF9,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-431K24.1	52503	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr1	8262223	8262541	8262360	Y	ERRFI1	RNU1-7P	ERRFI1,PARK7,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	2116	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	11559549	11559947	11559917	Y	NA	PTCHD2	NA	NA	NA	NA	PTCHD2	22326	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	11968510	11969143	11969021	Y	MTHFR,CLCN6,VPS13D,MIIP	KIAA2013,PLOD1	NA	NA	NA	NA	KIAA2013	15342	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	12674513	12674729	12674684	Y	NA	DHRS3	NA	NA	NA	NA	DHRS3	1008	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	15519488	15519688	15519655	Y	NA	TMEM51	NA	NA	NA	NA	TMEM51	42460	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	15664307	15664455	15664338	Y	NA	NA	EFHD2,CTRC,CELA2A,CELA2B	IMR90	Hi-C	24141950	EFHD2	69936	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	15738146	15738632	15738365	Y	SPEN,PLEKHM2,EFHD2,CASP9	EFHD2	NA	NA	NA	NA	EFHD2	3755	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	15738661	15738986	15738829	Y	SPEN,PLEKHM2,DDI2,EFHD2,CASP9,CASP9	EFHD2	NA	NA	NA	NA	EFHD2	4270	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	15743639	15744318	15744205	Y	NA	EFHD2	NA	NA	NA	NA	EFHD2	9248	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	16087189	16087372	16087266	Y	EPHA2,FBLIM1	RP11-169K16.4	NA	NA	NA	NA	RP11-169K16.4	12798	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	16125579	16125747	16125670	Y	FBLIM1,FBLIM1,FBLIM1,EPHA2	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.8	26977	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	16175691	16176294	16176100	Y	NA	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	3049	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	16212759	16213091	16212941	Y	EFHD2,PLEKHM2,ZBTB17,SPEN	SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	40117	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	16825333	16826291	16825792	Y	NA	NA	SPATA21,NECAP2,CROCCP3,NBPF1,CROCC	IMR90	Hi-C	24141950	NECAP2	60166	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	17231253	17231704	17231392	Y	PADI4,PADI2	RP11-108M9.4	CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-108M9.4	17109	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	17240188	17240783	17240515	Y	NA	RP11-108M9.4	CROCC	K562	ChIA-PET	22265404	RP11-108M9.4	26044	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	17578205	17578469	17578334	Y	NA	PADI3	NA	NA	NA	NA	PADI3	4612	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	17767804	17768710	17768126	Y	NA	RCC2	NA	NA	NA	NA	RCC2	3584	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr1	19333976	19334220	19334098	Y	NA	NA	UBR4,IFFO2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IFFO2	52796	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	21588176	21588724	21588522	Y	ECE1,ECE1	NA	NA	NA	NA	NA	ECE1	81273	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr1	21660622	21661187	21660789	Y	EIF4G3,EIF4G3,EIF4G3,ECE1,ECE1,ALPL,ECE1	ECE1	NA	NA	NA	NA	ECE1	8810	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	23429944	23430077	23430039	Y	NA	NA	NA	NA	NA	NA	LUZP1	72224	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	23523350	23523682	23523502	Y	LUZP1,HTR1D	LUZP1	NA	NA	NA	NA	LUZP1	21049	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	23881180	23881765	23881497	Y	NA	E2F2,ID3	E2F2	IMR90	Hi-C	24141950	ID3	2520	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr1	25051079	25051208	25051162	Y	NA	CLIC4	RUNX3,CLIC4,SRRM1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CLIC4	18640	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	25237083	25237520	25237460	Y	NA	NA	NA	NA	NA	NA	RUNX3	52092	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	25281668	25281921	25281754	Y	NA	RUNX3	NA	NA	NA	NA	RUNX3	7691	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr1	25559638	25560067	25559796	Y	RUNX3,SYF2,C1orf63	SYF2	NA	NA	NA	NA	SYF2	2645	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	26947342	26948198	26947481	Y	SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	72326	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	27024638	27025138	27024825	Y	SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV	ARID1A	NA	NA	NA	NA	ARID1A	4114	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	27527451	27527688	27527509	Y	NA	SLC9A1,WDTC1	WDTC1,SLC9A1,C1orf172	IMR90	Hi-C	24141950	WDTC1	31319	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	27691785	27692261	27692091	Y	TMEM222,MAP3K6	TMEM222,SYTL1,MAP3K6,GPR3	NA	NA	NA	NA	MAP3K6	402	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	28195628	28196024	28195738	Y	SESN2,PTAFR,PTAFR,MED18,EYA3,WASF2,FGR,FGR,FGR,XKR8,C1orf38	PPP1R8,SCARNA1,RPA2	NA	NA	NA	NA	SCARNA1	36716	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	28573636	28574084	28573917	Y	NA	DNAJC8,ATPIF1,SESN2	NA	NA	NA	NA	SESN2	9954	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr1	28618110	28618271	28618191	Y	ATPIF1	SESN2,MED18	NA	NA	NA	NA	SESN2	34072	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	29451057	29451462	29451431	Y	TMEM200B,TMEM200B	TMEM200B	NA	NA	NA	NA	TMEM200B	2610	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	31216468	31217229	31216636	Y	LAPTM5	LAPTM5	NA	NA	NA	NA	LAPTM5	11438	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	31627566	31627958	31627874	Y	SDC3,HCRTR1,NKAIN1	NA	SNRNP40,PUM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PUM1	90728	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	32180603	32180986	32180867	Y	PEF1,SPOCD1,COL16A1	BAI2	PEF1,COL16A1	IMR90	Hi-C	24141950	BAI2	47508	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	32420307	32420572	32420414	Y	TMEM234,PEF1,PTP4A2,PTP4A2	PTP4A2	KHDRBS1,SPOCD1,PTP4A2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTP4A2	11850	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	32421622	32422096	32421696	Y	MARCKSL1,PEF1,PTP4A2,PTP4A2,KHDRBS1	PTP4A2	KHDRBS1,SPOCD1,PTP4A2,TINAGL1,COL16A1,PEF1,BAI2,TMEM39B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTP4A2	13165	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	33077721	33078012	33077949	Y	FNDC5	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	36492	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	33515825	33516245	33515960	Y	RNF19B	AK2,ADC	AK2,S100PBP,RNF19B,TMEM54,FNDC5,HPCA,ADC	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AK2	28352	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	35935390	35935771	35935662	Y	NA	NA	NA	NA	NA	NA	NCDN	85303	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	36183411	36183689	36183588	Y	C1orf216	C1orf216,CLSPN	NA	NA	NA	NA	C1orf216	338	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	36616485	36616868	36616577	Y	STK40,SH3D21,CSF3R,EIF2C4,EIF2C1,EIF2C3,MAP7D1	TRAPPC3,MAP7D1	NA	NA	NA	NA	MAP7D1	2312	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	36814630	36815106	36814974	Y	EIF2C1,EIF2C3,MAP7D1,THRAP3,STK40,CSF3R,SH3D21	SH3D21,STK40,LSM10	NA	NA	NA	NA	STK40	34391	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	36839449	36839891	36839558	Y	EIF2C1,EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,LSM10,CSF3R	STK40,LSM10	NA	NA	NA	NA	STK40	9606	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	36840093	36840535	36840445	Y	EIF2C1,EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,LSM10,CSF3R	STK40,LSM10	NA	NA	NA	NA	STK40	8962	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr1	37932554	37932910	37932770	Y	NA	LINC01137,ZC3H12A,MEAF6	NA	NA	NA	NA	LINC01137	5102	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	37942874	37943354	37943027	Y	YRDC,SNIP1,MTF1,ZC3H12A	LINC01137,ZC3H12A,MEAF6	NA	NA	NA	NA	ZC3H12A	4721	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	41005233	41005440	41005262	Y	RLF	RP11-656D10.3,ZNF684	NA	NA	NA	NA	ZNF684	10000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	41962532	41962651	41962593	Y	NA	NA	NA	NA	NA	NA	FOXO6	136938	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	42127851	42128791	42128091	Y	NA	NA	NA	NA	NA	NA	FOXO6	302257	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	42385609	42385954	42385889	Y	FOXJ3,FOXJ3,FOXJ3	NA	NA	NA	NA	NA	HIVEP3	113642	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	43388597	43388971	43388887	Y	NA	SLC2A1	NA	NA	NA	NA	SLC2A1	33559	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	43389220	43390772	43390027	Y	NA	SLC2A1	NA	NA	NA	NA	SLC2A1	31758	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	43988888	43989038	43988936	Y	PTPRF	PTPRF	PTPRF	IMR90	Hi-C	24141950	PTPRF	30	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr1	44378405	44378587	44378508	Y	CCDC24,B4GALT2,ARTN	RP11-7O11.3,IPO13	NA	NA	NA	NA	RP11-7O11.3	31636	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	44452990	44453115	44453039	Y	NA	RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24,SLC6A9	NA	NA	NA	NA	CCDC24	1916	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	44689979	44690114	44690071	Y	NA	DMAP1	NA	NA	NA	NA	DMAP1	12852	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	45167170	45167180	45167175	Y	NA	TMEM53,RNU5F-1,KIF2C	NA	NA	NA	NA	RNU5F-1	18394	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	46111666	46112048	46111975	Y	NA	RP11-767N6.2,TMEM69,GPBP1L1	NA	NA	NA	NA	RP11-767N6.2	3450	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	46902512	46902655	46902542	Y	NA	NA	NA	NA	NA	NA	NSUN4	98663	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	47718105	47718425	47718265	Y	NA	TAL1	TAL1	IMR90	Hi-C	24141950	TAL1	22213	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	47800262	47800514	47800436	Y	NA	STIL,CMPK1	NA	NA	NA	NA	CMPK1	2793	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	50799292	50799453	50799422	Y	NA	NA	AGBL4	IMR90	Hi-C	24141950	FAF1	624482	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	51215461	51215472	51215465	Y	NA	NA	NA	NA	NA	NA	FAF1	208463	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	51245588	51245972	51245952	Y	NA	NA	NA	NA	NA	NA	FAF1	177963	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	51261727	51261870	51261800	Y	NA	NA	NA	NA	NA	NA	FAF1	162065	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	52885344	52885737	52885540	Y	ZCCHC11	ORC1,PRPF38A	NA	NA	NA	NA	PRPF38A	17108	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	53703343	53703361	53703351	Y	NA	CPT2,C1orf123,MAGOH	NA	NA	NA	NA	MAGOH	1061	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	54150852	54151742	54151620	Y	NA	NA	NA	NA	NA	NA	YIPF1	202665	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	54441729	54442008	54441915	Y	NA	HSPB11,LRRC42	NA	NA	NA	NA	LRRC42	31979	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	54953784	54954325	54954090	Y	SSBP3,SSBP3	NA	TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SSBP3	76632	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	59281873	59282217	59282125	Y	MYSM1,FGGY,JUN	JUN,LINC01135	NA	NA	NA	NA	LINC01135	33050	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	59369049	59370138	59369602	Y	FGGY	NA	NA	NA	NA	NA	LINC01135	120226	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	59616706	59617089	59616861	Y	NA	NA	HSD52,FGGY,JUN,LOC100131060,MIR4711	IMR90	Hi-C	24141950	FGGY	143221	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	59910700	59911009	59910820	Y	NA	NA	NA	NA	NA	NA	FGGY	150390	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	67029191	67029437	67029359	Y	NA	NA	NA	NA	NA	NA	WDR78	359133	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	67029939	67030347	67030122	Y	PDE4B	NA	NA	NA	NA	NA	WDR78	358223	CAGE	1C3IKEI	hg19	FANTOM5	13.7813056219909
chr1	68257383	68257657	68257565	Y	NA	GNG12	NA	NA	NA	NA	GNG12	39493	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	68647153	68647165	68647159	Y	NA	WLS	NA	NA	NA	NA	WLS	49638	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	70807938	70808237	70808103	Y	NA	ANKRD13C,HHLA3	NA	NA	NA	NA	ANKRD13C	10180	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	72749220	72749791	72749447	Y	NEGR1	NEGR1	NA	NA	NA	NA	NEGR1	2803	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	76250721	76250813	76250769	Y	ACADM,RABGGTB	RABGGTB,SNORD45A	NA	NA	NA	NA	SNORD45A	761	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	76581893	76581954	76581924	Y	NA	ST6GALNAC3	NA	NA	NA	NA	ST6GALNAC3	43489	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	76776213	76776609	76776411	Y	NA	NA	NA	NA	NA	NA	ST6GALNAC3	237809	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	78350506	78350835	78350671	Y	FAM73A	NA	NA	NA	NA	NA	FUBP1	91959	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	79215772	79216132	79215819	Y	NA	NA	NA	NA	NA	NA	IFI44	102291	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	79506230	79506516	79506373	Y	IFI44	NA	NA	NA	NA	NA	IFI44	392749	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	79518661	79518859	79518772	Y	NA	NA	NA	NA	NA	NA	IFI44	405180	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	84710038	84710507	84710127	Y	NA	NA	NA	NA	NA	NA	PRKACB	168293	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	84746838	84747079	84746959	Y	DNASE2B,DNASE2B	NA	SAMD13,UOX	IMR90	Hi-C	24141950	RPF1	195863	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	84896355	84896549	84896476	Y	NA	RPF1	NA	NA	NA	NA	RPF1	46393	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	85643319	85643587	85643547	Y	NA	SYDE2	MIR4423	IMR90	Hi-C	24141950	SYDE2	21142	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	86072885	86073441	86073156	Y	CYR61	DDAH1,CYR61	DDAH1,ZNHIT6,CYR61,COL24A1	IMR90	Hi-C	24141950	CYR61	28441	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	87800631	87801610	87800748	Y	NA	LMO4	NA	NA	NA	NA	LMO4	8480	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	90101821	90102213	90101853	Y	ZNF326,LRRC8D,GBP4,GBP5,LRRC8B,LRRC8B,LRRC8C	LRRC8C	NA	NA	NA	NA	LRRC8C	5190	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	90319744	90319959	90319950	Y	NA	LRRC8D	NA	NA	NA	NA	LRRC8D	35171	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	93634565	93634982	93634927	Y	MTF2	CCDC18,TMED5	NA	NA	NA	NA	CCDC18	8494	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94007993	94008357	94008092	Y	FNBP1L,BCAR3	NA	NA	NA	NA	NA	FNBP1L	96305	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	94023703	94024059	94023930	Y	NA	NA	NA	NA	NA	NA	FNBP1L	112015	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94084336	94084510	94084423	Y	NA	NA	NA	NA	NA	NA	RP11-488P3.1	154490	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94125861	94126246	94126059	Y	NA	NA	NA	NA	NA	NA	RP11-488P3.1	112754	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94127789	94128026	94127840	Y	GCLM,TMED5,DNTTIP2	NA	NA	NA	NA	NA	RP11-488P3.1	110974	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94145547	94146118	94145739	Y	NA	NA	NA	NA	NA	NA	RP11-488P3.1	92882	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	94158601	94159338	94158654	Y	GCLM,DNTTIP2,BCAR3	NA	BCAR3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488P3.1	79662	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr1	94244939	94245309	94245199	Y	ARHGAP29,FNBP1L,BCAR3	RP11-488P3.1	BCAR3,MIR760,FNBP1L	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488P3.1	5939	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94535371	94535770	94535449	Y	ARHGAP29	NA	NA	NA	NA	NA	GCLM	162405	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr1	94621912	94621923	94621919	Y	NA	NA	NA	NA	NA	NA	ARHGAP29	116701	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	94712395	94712617	94712502	Y	ARHGAP29	ARHGAP29	ABCA4,ARHGAP29,ABCD3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP29	26007	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	96828119	96828533	96828302	Y	NA	NA	PTBP2	IMR90	Hi-C	24141950	EEF1A1P11	81953	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	97549999	97550397	97550198	Y	NA	NA	NA	NA	NA	NA	PTBP2	364778	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	97994700	97995088	97995052	Y	NA	NA	NA	NA	NA	NA	DPYD	389517	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	98606055	98606462	98606113	Y	NA	NA	NA	NA	NA	NA	RP5-1070A16.1	67841	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	100858865	100858991	100858930	Y	SLC35A3,HIAT1,CDC14A	NA	NA	NA	NA	NA	CDC14A	50281	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	101685732	101686092	101685974	Y	NA	NA	NA	NA	NA	NA	DPH5	196088	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	109467804	109468470	109468110	Y	GPSM2,WDR47,SORT1,SORT1,PSRC1,CELSR2,CLCC1	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	35636	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	109499781	109500180	109500079	Y	NA	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	3926	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	109784080	109784425	109784202	Y	NA	SARS,CELSR2,PSRC1	CELSR2	IMR90	Hi-C	24141950	CELSR2	6216	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	110334849	110335164	110334977	Y	NA	NA	CSF1,FAM40A,GSTM4,AHCYL1,EPS8L3,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GSTM3	52465	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	110363861	110364229	110364029	Y	GNAI3,AMPD2	NA	CSF1,AHCYL1	IMR90	Hi-C	24141950	GSTM3	81477	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	110548379	110548612	110548408	Y	NA	AHCYL1	NA	NA	NA	NA	AHCYL1	23071	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	112276731	112276883	112276807	Y	C1orf162,RAP1A,C1orf183,C1orf183	DDX20,FAM212B	NA	NA	NA	NA	DDX20	18984	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	113072370	113072489	113072380	Y	NA	NA	NA	NA	NA	NA	CAPZA1	87306	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	113468568	113468671	113468620	Y	NA	SLC16A1-AS1,SLC16A1	NA	NA	NA	NA	SLC16A1-AS1	28366	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	114236415	114236760	114236542	Y	MAGI3	NA	NA	NA	NA	NA	PHTF1	63351	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	115605190	115605611	115605404	Y	BCAS2,SIKE1	TSPAN2	NA	NA	NA	NA	TSPAN2	24510	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	116088478	116088732	116088606	Y	NA	NA	NGF,VANGL1,SYCP1	IMR90	Hi-C	24141950	VANGL1	93842	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	116520279	116520650	116520380	Y	ATP1A1,ATP1A1,ATP1A1,SLC22A15	SLC22A15	NA	NA	NA	NA	SLC22A15	3160	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	116920378	116921129	116920740	Y	SLC22A15,ATP1A1,ATP1A1,CD58,ATP1A1	ATP1A1,ATP1A1OS	NA	NA	NA	NA	ATP1A1	7088	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	120188395	120188927	120188667	Y	NA	PHGDH	NA	NA	NA	NA	ZNF697	0	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	120275491	120275880	120275569	Y	ADAM30	NA	NA	NA	NA	NA	PHGDH	75070	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	121485082	121485212	121485187	Y	NA	NA	NA	NA	NA	NA	HIST2H2BA	581054	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	144009977	144010738	144010098	Y	NA	NA	NA	NA	NA	NA	NBPF8	134070	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	144927217	144927550	144927432	Y	PDE4DIP,SEC22B,PDE4DIP,NOTCH2NL,NBPF10	NA	NA	NA	NA	NA	NBPF9	117473	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	145396760	145397198	145397044	Y	NA	RP11-458D21.1,RNVU1-6	LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNVU1-6	16003	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	147010961	147011177	147011069	Y	NA	NA	ACP6	IMR90	Hi-C	24141950	ACP6	129441	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	147806841	147807184	147807140	Y	NA	RNU1-122P	NA	NA	NA	NA	RNU1-122P	1955	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	150577042	150577503	150577391	Y	CDC42SE1,PLEKHO1,PRPF3,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	22585	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	150949569	150950014	150949933	Y	ZNF687,TNFAIP8L2,SELENBP1,RFX5,POGZ,POGZ,PI4KB,PI4KB,CDC42SE1,MCL1,CTSS,ARNT,SETDB1,LASS2,PRUNE,FAM63A,FAM63A,FAM63A	CERS2,FAM63A,PRUNE	NA	NA	NA	NA	CERS2	4090	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	151184646	151184728	151184696	Y	NA	LYSMD1,VPS72,PIP5K1A,PSMD4	NA	NA	NA	NA	PIP5K1A	16221	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	151913815	151914271	151914054	Y	S100A10	THEM4	S100A10,CELF3,THEM4,RORC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	THEM4	33531	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	151952807	151953143	151952837	Y	NA	S100A10	NA	NA	NA	NA	S100A10	11723	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	151973450	151973865	151973747	Y	S100A10	S100A10,S100A11	THEM4,S100A10,S100A11,RORC	IMR90	Hi-C	24141950	S100A10	8584	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	153541018	153541368	153541269	Y	PGLYRP3,S100A7L2,S100A6,S100A2,S100A16,S100A14,S100A13,S100A13,S100A13	BX470102.3,S100A6,S100A4,S100A2,S100A16	NA	NA	NA	NA	S100A2	2652	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	153818420	153818667	153818544	Y	NA	NA	NA	NA	NA	NA	GATAD2B	74784	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	154154606	154155027	154154830	Y	SLC27A3,DENND4B,CRTC2,IL6R,ADAR,ADAR,UBAP2L,UBAP2L,TPM3	TPM3,UBAP2L,C1orf43	NA	NA	NA	NA	TPM3	10097	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	154832851	154833092	154832964	Y	RUSC1-AS1,RUSC1,RUSC1,CLK2,ADAR,KCNN3,PMVK,KCNN3	KCNN3	NA	NA	NA	NA	KCNN3	7664	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	155433776	155433971	155433878	Y	MTX1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,RIT1	NA	NA	NA	NA	NA	ASH1L-AS1	95850	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	155469100	155469412	155469293	Y	MTX1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,RIT1,ARHGEF2,ARHGEF2	NA	NA	NA	NA	NA	ASH1L-AS1	60409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	155945743	155946196	155946108	Y	C1orf182,ASH1L,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,SLC25A44,RIT1,KIAA0907,ARHGEF2,ARHGEF2	KIAA0907,ARHGEF2,SSR2	RXFP4,KIAA0907	K562	ChIA-PET	22265404	ARHGEF2	28665	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156095033	156095181	156095051	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,RIT1,ARHGEF2,ARHGEF2,LMNA	MEX3A,LMNA	NA	NA	NA	NA	LMNA	44669	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156118146	156118395	156118328	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,RIT1,ARHGEF2,ARHGEF2	SLC25A44	NA	NA	NA	NA	SLC25A44	43485	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156426931	156427503	156427197	Y	ARHGEF2,ARHGEF2,LMNA,SLC25A44,PMF1,C1orf182,SH2D2A,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	41117	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	156461502	156461819	156461755	Y	MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	6801	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156472693	156472952	156472780	Y	LMNA,C1orf182,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	4073	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156474686	156475018	156474923	Y	SLC25A44,PMF1,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	6066	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156629760	156630406	156629967	Y	PAQR6,PAQR6,C1orf182,CCT3,ISG20L2,GPATCH4,HAPLN2	RP11-284F21.7	NA	NA	NA	NA	RP11-284F21.7	544	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	156718467	156719136	156718868	Y	C1orf182,MEF2D,ETV3,ETV3,RRNAD1	RRNAD1,ISG20L2,MRPL24,PRCC,HDGF	NA	NA	NA	NA	PRCC	65	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	158146699	158147069	158146946	Y	NA	NA	NA	NA	NA	NA	KIRREL	185636	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	158147244	158147839	158147743	Y	NA	NA	NA	NA	NA	NA	KIRREL	186181	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	159851477	159851987	159851825	Y	SLAMF9,COPA,SLAMF8,TAGLN2	C1orf204,CCDC19,TAGLN2	NA	NA	NA	NA	CCDC19	15966	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	159859603	159860031	159859945	Y	SLAMF9,COPA,SLAMF8,TAGLN2	C1orf204,CCDC19,TAGLN2	C1orf204,SLAMF8	IMR90	Hi-C	24141950	CCDC19	7922	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr1	161369073	161369991	161369486	Y	NA	NA	ADAMTS4,NDUFS2,APOA2,TOMM40L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SDHC	87026	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	163005587	163006022	163005933	Y	UAP1,DDR2,RGS4,RGS4,RGS4,RGS4	RGS4	C1orf110	IMR90	Hi-C	24141950	RGS4	30543	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	163098384	163098482	163098454	Y	RGS5,RGS5	NA	NA	NA	NA	NA	RGS4	61819	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	163107964	163108181	163108073	Y	NA	NA	NA	NA	NA	NA	RGS4	71399	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	164580985	164581415	164581219	Y	NA	NA	NA	NA	NA	NA	PBX1	58164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	164681412	164681799	164681686	Y	NA	NA	NA	NA	NA	NA	PBX1	158591	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	167191021	167191933	167191618	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	2955	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	167192959	167193266	167193111	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	4893	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	167399403	167399506	167399433	Y	CD247	NA	NA	NA	NA	NA	CREG1	121498	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	167683554	167683813	167683605	Y	POU2F1,CREG1	MPZL1	NA	NA	NA	NA	MPZL1	4616	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	168338134	168338331	168338175	Y	NA	NA	NA	NA	NA	NA	TBX19	89856	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	172291507	172291926	172291559	Y	NA	NA	NA	NA	NA	NA	PIGC	119304	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	173164805	173165199	173165000	Y	TNFSF4	NA	NA	NA	NA	NA	PRDX6	279206	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	173328578	173328674	173328661	Y	NA	NA	NA	NA	NA	NA	PRDX6	115731	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	173447359	173447668	173447399	Y	PRDX6	PRDX6	NA	NA	NA	NA	PRDX6	2954	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	173816933	173817269	173817101	Y	NA	DARS2,CENPL,ZBTB37,GAS5	NA	NA	NA	NA	ZBTB37	17951	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	174365403	174365798	174365601	Y	NA	NA	NA	NA	NA	NA	RABGAP1L	238855	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	178207948	178208160	178207999	Y	NA	NA	NA	NA	NA	NA	RASAL2	147084	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	178379281	178379736	178379396	Y	NA	NA	NA	NA	NA	NA	C1orf220	130151	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	179098871	179099008	179098957	Y	NA	NA	NA	NA	NA	NA	TOR3A	50359	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	180250812	180250948	180250921	Y	NA	NA	NA	NA	NA	NA	QSOX1	128843	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	180371123	180371295	180371283	Y	NA	NA	NA	NA	NA	NA	ACBD6	98794	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	183133608	183133779	183133664	Y	LAMC2	LAMC2	NA	NA	NA	NA	LAMC2	19594	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	183149947	183150219	183150157	Y	LAMC2	LAMC2	NA	NA	NA	NA	LAMC2	3154	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	183178797	183178927	183178861	Y	NA	LAMC2	NA	NA	NA	NA	LAMC2	25424	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	184033703	184034036	184033838	Y	NA	TSEN15	NA	NA	NA	NA	TSEN15	14892	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	184773428	184773803	184773695	Y	SWT1,SWT1,RNF2,FAM129A,EDEM3	NA	NA	NA	NA	NA	EDEM3	51381	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	184794829	184794875	184794854	Y	NA	NA	NA	NA	NA	NA	EDEM3	72782	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	184810330	184810429	184810414	Y	NA	NA	NA	NA	NA	NA	EDEM3	88283	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	184820980	184820991	184820986	Y	NA	NA	NA	NA	NA	NA	EDEM3	98933	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	185109809	185110137	185110116	Y	IVNS1ABP	TRMT1L,SWT1	NA	NA	NA	NA	TRMT1L	14067	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	185344563	185345243	185344914	Y	FAM129A,RNF2,TRMT1L,SWT1,TRMT1L,SWT1,IVNS1ABP	NA	IVNS1ABP,LOC100288079	IMR90	Hi-C	24141950	IVNS1ABP	60102	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	186799738	186800031	186799804	Y	PTGS2,PLA2G4A	PLA2G4A	NA	NA	NA	NA	PLA2G4A	3653	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	187235320	187235513	187235392	Y	NA	NA	NA	NA	NA	NA	PLA2G4A	439235	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	187996792	187997117	187996893	Y	NA	NA	NA	NA	NA	NA	PLA2G4A	1200707	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	193726401	193726456	193726429	Y	NA	NA	NA	NA	NA	NA	CDC73	637254	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	200783735	200784105	200783920	Y	NA	NA	NA	NA	NA	NA	CAMSAP2	77049	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	200857233	200857815	200857711	Y	KIF21B	NA	NA	NA	NA	NA	KIF21B	133013	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	201244405	201244769	201244526	Y	PKP1	NA	PKP1,TMEM9,LAD1,TNNI1,IGFN1,TNNT2	IMR90	Hi-C	24141950	TMEM9	105703	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	201683757	201684240	201683949	Y	NA	NA	NA	NA	NA	NA	NAV1	93346	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	201768733	201769083	201768901	Y	NA	IPO9,IPO9-AS1	IPO9	IMR90	Hi-C	24141950	IPO9	27186	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	201864045	201864232	201864194	Y	NA	SHISA4,LMOD1	NA	NA	NA	NA	SHISA4	8237	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	202737599	202737762	202737681	Y	NA	RP11-480I12.2,KDM5B,PCAT6	NA	NA	NA	NA	RP11-480I12.2	3053	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	203296328	203297068	203296686	Y	LAX1,RABIF,TMEM183A,TMEM183B,BTG2	BTG2	NA	NA	NA	NA	BTG2	23709	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	203481982	203482534	203482093	Y	BTG2,ATP2B4	NA	NA	NA	NA	NA	ATP2B4	111155	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	203506114	203506504	203506389	Y	NA	NA	NA	NA	NA	NA	ATP2B4	87185	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	203643182	203643803	203643474	Y	BTG2,LAX1	ATP2B4	LAX1	IMR90	Hi-C	24141950	ATP2B4	49493	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	204053773	204053963	204053834	Y	NA	SOX13	NA	NA	NA	NA	SOX13	13530	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	204386444	204387188	204386898	Y	PPP1R15B	PPP1R15B	NA	NA	NA	NA	PPP1R15B	7525	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	205267691	205267999	205267801	Y	NA	NUAK2	NA	NA	NA	NA	NUAK2	20884	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	206861410	206861458	206861434	Y	NA	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	5121	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	208021631	208021781	208021738	Y	CR1,CD46,PLXNA2,CD34	C1orf132	CD34	IMR90	Hi-C	24141950	C1orf132	18714	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	208136912	208137268	208137107	Y	NA	NA	CD34,LOC148696,MIR29B2,MIR29C,PLXNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	C1orf132	96417	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	208388887	208389573	208389450	Y	NA	PLXNA2	NA	NA	NA	NA	PLXNA2	26092	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	210812063	210812447	210812256	Y	HHAT,HHAT,KCNH1	NA	NA	NA	NA	NA	RNU5A-8P	266452	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	211688648	211688771	211688711	Y	NA	NA	NEK2,RCOR3,TRAF5,LINC00467,RD3,SLC30A1,INTS7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC30A1	61313	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	212256975	212257253	212257095	Y	DTL,INTS7	RPL21P28	NA	NA	NA	NA	RPL21P28	33604	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	212808477	212808830	212808706	Y	RPS6KC1,ATF3,ATF3,ATF3	NA	NA	NA	NA	NA	BATF3	62497	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	212923712	212923837	212923822	Y	NA	NSL1,TATDN3	NA	NA	NA	NA	NSL1	39287	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	213160414	213160619	213160568	Y	VASH2	VASH2,ANGEL2	NA	NA	NA	NA	ANGEL2	26549	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	213500745	213500914	213500832	Y	RPS6KC1	NA	PROX1	IMR90	Hi-C	24141950	RPS6KC1	278156	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	214157858	214157941	214157900	Y	PROX1	PROX1	PROX1-AS1	IMR90	Hi-C	24141950	PROX1	3334	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	214648804	214649025	214648867	Y	NA	NA	NA	NA	NA	NA	PTPN14	74767	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	216774004	216774285	216774188	Y	ESRRG,ESRRG	NA	NA	NA	NA	NA	GPATCH2	1028139	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	219971715	219971862	219971811	Y	NA	NA	NA	NA	NA	NA	EPRS	246138	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	221916049	221916599	221916319	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	2531	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr1	222439708	222439874	222439791	Y	NA	NA	NA	NA	NA	NA	HHIPL2	279571	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	222461432	222461724	222461569	Y	NA	NA	DUSP10	IMR90	Hi-C	24141950	HHIPL2	257721	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	223901276	223901546	223901311	Y	TP53BP2,FBXO28,CAPN2	CAPN2	NA	NA	NA	NA	CAPN2	13981	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	223964690	223965055	223964731	Y	TP53BP2,FBXO28	NA	NA	NA	NA	NA	TP53BP2	66619	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	224014874	224015267	224015181	Y	CAPN2,FBXO28,TP53BP2	TP53BP2	NA	NA	NA	NA	TP53BP2	16407	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	224180261	224180516	224180350	Y	NA	NA	NA	NA	NA	NA	FBXO28	119273	CAGE	1C3IKEI	hg19	FANTOM5	21.437586523097
chr1	225721902	225722011	225721957	Y	NA	NA	NA	NA	NA	NA	LBR	107275	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	225954708	225954967	225954837	Y	NA	SRP9,EPHX1	ENAH	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SRP9	8564	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	226163769	226163979	226163848	Y	NA	NA	NA	NA	NA	NA	PYCR2	53791	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	226890865	226891416	226891300	Y	ITPKB	ITPKB	NA	NA	NA	NA	ITPKB	33608	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	228273480	228273740	228273633	Y	ARF1,ARF1	ARF1,C1orf35,MRPL55	NA	NA	NA	NA	ARF1	5119	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	228678228	228678435	228678266	Y	NA	HIST3H2A,HIST3H2BB,HIST3H2BA,RNF187	NA	NA	NA	NA	RNF187	5466	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	228783266	228783899	228783495	Y	C1orf35,TRIM11,HIST3H2A,RHOU	NA	NA	NA	NA	NA	RHOU	84925	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	229473732	229474385	229474330	Y	NA	NA	NA	NA	NA	NA	RAB4A	68910	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	230240540	230240902	230240735	Y	NA	GALNT2	NA	NA	NA	NA	GALNT2	49004	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	230561990	230562633	230562303	Y	NA	NA	NA	NA	NA	NA	COG2	213602	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	231531776	231531955	231531804	Y	NA	EGLN1	NA	NA	NA	NA	EGLN1	26835	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	232106545	232106680	232106599	Y	NA	NA	NA	NA	NA	NA	DISC1	345984	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	232735038	232735290	232735230	Y	NA	NA	TSNAX-DISC1	IMR90	Hi-C	24141950	RNU1-74P	230643	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr1	232765644	232766127	232765957	Y	NA	NA	TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2	IMR90	Hi-C	24141950	RNU1-74P	199806	CAGE	1C3IKEI	hg19	FANTOM5	4.90001977670789
chr1	233249275	233249581	233249334	Y	NA	NA	NA	NA	NA	NA	NTPCR	164924	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	234163168	234163347	234163228	Y	SLC35F3	NA	NA	NA	NA	NA	RP5-827C21.1	327540	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	234746093	234747674	234747395	Y	IRF2BP2	IRF2BP2	NA	NA	NA	NA	IRF2BP2	2822	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	234792654	234793437	234793098	Y	NA	IRF2BP2	IRF2BP2,TARBP1,LINC00184,LOC100506810	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IRF2BP2	49383	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	234908151	234908764	234908277	Y	IRF2BP2	NA	IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IRF2BP2	164880	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	235097868	235098070	235097979	Y	IRF2BP2,ARID4B,ARID4B	RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,TARBP1,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.3	16481	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	236080566	236081247	236080933	Y	LYST,GPR137B	LYST	B3GALNT2,LYST,NID1	IMR90	Hi-C	24141950	LYST	35626	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	240306890	240307603	240307416	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23852	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	240308546	240308862	240308776	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	22593	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	243893800	243893985	243893919	Y	NA	NA	NA	NA	NA	NA	AKT3	118396	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	246061196	246061440	246061372	Y	NA	NA	NA	NA	NA	NA	SMYD3	607174	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr1	246948292	246948613	246948340	Y	NA	NA	NA	NA	NA	NA	SCCPDH	62943	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	247038123	247038250	247038187	Y	NA	NA	NA	NA	NA	NA	AHCTF1	55030	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr1	247326566	247327229	247326989	Y	NA	NA	NA	NA	NA	NA	ZNF669	60892	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	361512	361916	361783	Y	NA	NA	NA	NA	NA	NA	ZMYND11	183107	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	3509617	3509911	3509759	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PITRM1	296614	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	3797195	3797502	3797389	Y	KLF6	KLF6	NA	NA	NA	NA	KLF6	27971	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr10	3808656	3808872	3808754	Y	KLF6	KLF6	NA	NA	NA	NA	KLF6	16601	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	3848037	3849536	3848891	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	22564	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	4396174	4396330	4396296	Y	NA	NA	LOC338588,LOC100216001,PITRM1,LOC100507034,KLF6	IMR90	Hi-C	24141950	LINC00704	322016	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	4705159	4705783	4705486	Y	NA	LINC00704	NA	NA	NA	NA	LINC00704	12563	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	4713647	4713873	4713697	Y	NA	LINC00704	NA	NA	NA	NA	LINC00704	4473	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	5333644	5334212	5333929	Y	NA	NA	AKR1E2,tAKR	IMR90	Hi-C	24141950	NET1	118302	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	5638863	5639270	5639216	Y	NET1,CALML3	RP13-463N16.6	NET1	K562,MCF7	ChIA-PET	22265404	RP13-463N16.6	2782	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr10	7153471	7153932	7153701	Y	NA	NA	LOC100507127	IMR90	Hi-C	24141950	PRKCQ	533208	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	13908290	13908478	13908416	Y	NA	NA	NA	NA	NA	NA	PRPF18	281363	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	13924181	13924825	13924574	Y	NA	NA	NA	NA	NA	NA	PRPF18	297254	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	14026617	14027027	14026853	Y	NA	NA	NA	NA	NA	NA	PRPF18	399690	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	14032375	14032782	14032539	Y	NA	NA	NA	NA	NA	NA	PRPF18	405448	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	17280857	17281170	17281014	Y	TRDMT1,VIM	TRDMT1,VIM,RP11-124N14.3	NA	NA	NA	NA	RP11-124N14.3	6025	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	21241912	21242237	21242078	Y	NA	NA	NA	NA	NA	NA	NEBL	218879	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	21386477	21386751	21386615	Y	NA	NA	NA	NA	NA	NA	NEBL	74365	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	21816029	21816444	21816223	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	4650	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	22725331	22726270	22725901	Y	NA	NA	NA	NA	NA	NA	BMI1	117191	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr10	27419520	27419901	27419745	Y	NA	ANKRD26,MASTL,YME1L1	NA	NA	NA	NA	MASTL	21852	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	27531769	27532240	27532024	Y	ABI1,ANKRD26,YME1L1,MASTL,ACBD5	ACBD5	NA	NA	NA	NA	ACBD5	2710	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr10	29887787	29888175	29887987	Y	NA	NA	NA	NA	NA	NA	SVIL	135535	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	29922205	29922549	29922392	Y	SVIL	NA	NA	NA	NA	NA	SVIL	101161	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	29980945	29980999	29980955	Y	NA	SVIL	NA	NA	NA	NA	SVIL	42711	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	30791299	30791558	30791362	Y	ZNF438,MAP3K8	NA	MAP3K8,LOC729668	IMR90	Hi-C	24141950	MAP3K8	70433	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	31422679	31422989	31422772	Y	ZNF438,ZNF438	NA	ARHGAP12,ZEB1,ZNF438,ZEB1-AS1	IMR90	Hi-C	24141950	ZNF438	103813	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	31986198	31986456	31986355	Y	NA	NA	ARHGAP12,ZEB1,ZNF438	IMR90	Hi-C	24141950	ARHGAP12	229286	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	32048872	32049424	32049213	Y	ZEB1,KIF5B	NA	ZNF438,ZEB1,ARHGAP12,LYZL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	166318	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	33562254	33562552	33562425	Y	ITGB1,ITGB1,NRP1	NA	NA	NA	NA	NA	NRP1	60638	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	36823544	36823839	36823735	Y	NA	NAMPTL	NA	NA	NA	NA	NAMPTL	12382	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	38264185	38264489	38264470	Y	ZNF37A,ZNF248,ZNF25	ZNF25,ZNF33A	NA	NA	NA	NA	ZNF25	624	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	43249248	43249682	43249506	Y	NA	BMS1	NA	NA	NA	NA	BMS1	26567	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	43249715	43249807	43249770	Y	NA	BMS1	NA	NA	NA	NA	BMS1	26442	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	43633157	43633403	43633253	Y	RASGEF1A	CSGALNACT2	NA	NA	NA	NA	CSGALNACT2	1223	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	47655672	47656071	47655889	Y	NA	NA	AGAP7	MCF7	ChIA-PET	22265404	RP11-463P17.1	674126	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	52079574	52079882	52079666	Y	NA	NA	NA	NA	NA	NA	DYNC1I2P1	56836	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	54329490	54329893	54329885	Y	NA	NA	LOC100506939,DKK1,PRKG1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-346D6.6	101197	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	54471417	54471775	54471523	Y	NA	NA	NA	NA	NA	NA	RP11-346D6.6	243124	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	63842469	63842743	63842551	Y	ARID5B	NA	NA	NA	NA	NA	ARID5B	183410	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	65016713	65017097	65017085	Y	NA	NA	NA	NA	NA	NA	NRBF2	125663	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	65078433	65078736	65078637	Y	NA	NA	NA	NA	NA	NA	PRELID1P3	106321	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	65389747	65390882	65390384	Y	NA	NA	NA	NA	NA	NA	REEP3	110624	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr10	65930110	65930546	65930307	Y	NA	NA	NA	NA	NA	NA	REEP3	650987	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	69609160	69609390	69609211	Y	NA	SIRT1	SIRT1	K562	ChIA-PET	22265404	SIRT1	33037	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr10	71693212	71693346	71693279	Y	NA	NA	NA	NA	NA	NA	H2AFY2	117206	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	71928097	71928630	71928606	Y	NA	AIFM2,TYSND1	TYSND1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SAR1A	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	71984000	71984297	71984282	Y	NA	PPA1	NA	NA	NA	NA	PPA1	7370	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	72435631	72435850	72435741	Y	ADAMTS14	ADAMTS14	NA	NA	NA	NA	ADAMTS14	5072	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	72973788	72974249	72973953	Y	UNC5B	UNC5B	NA	NA	NA	NA	UNC5B	3461	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74032298	74032943	74032475	Y	NA	DDIT4	NA	NA	NA	NA	DDIT4	620	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	74056833	74058104	74057179	Y	PSAP,DDIT4,DNAJB12	DDIT4	NA	NA	NA	NA	DDIT4	25155	CAGE	1C3IKEI	hg19	FANTOM5	3.98126606857516
chr10	74078612	74078870	74078849	Y	PSAP,DDIT4,CBARA1,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	34118	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	74079380	74080359	74079580	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	32629	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74080430	74080993	74080646	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	31995	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	74085147	74085316	74085305	Y	NA	DNAJB12	NA	NA	NA	NA	DNAJB12	27672	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74091361	74091474	74091418	Y	SPOCK2,DDIT4,DNAJB12	DNAJB12	NA	NA	NA	NA	DNAJB12	21514	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74271285	74271561	74271407	Y	DDIT4,DNAJB12,CBARA1	NA	NA	NA	NA	NA	MICU1	112338	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74289425	74289733	74289722	Y	NA	NA	NA	NA	NA	NA	MICU1	94166	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74436264	74436425	74436399	Y	CCDC109A,ASCC1,ASCC1	HMGN2P34,MCU	MICU1,OIT3,PLA2G12B,MCU	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MCU	13464	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	74990824	74990933	74990931	Y	NA	DNAJC9,MRPS16,RP11-152N13.5	NA	NA	NA	NA	DNAJC9	15687	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	75022023	75022098	75022060	Y	NA	DNAJC9,MRPS16,RP11-152N13.5	NA	NA	NA	NA	RP11-152N13.5	11474	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	75222632	75223003	75222818	Y	NA	RP11-345K20.2,RP11-137L10.6,PPP3CB	NA	NA	NA	NA	RP11-137L10.6	30280	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	75240023	75240096	75240089	Y	NA	RP11-137L10.6,PPP3CB	NA	NA	NA	NA	RP11-137L10.6	13187	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	75768391	75768772	75768419	Y	NA	VCL	NA	NA	NA	NA	VCL	12519	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	75887856	75888019	75887938	Y	NA	AP3M1,ADK	NA	NA	NA	NA	AP3M1	20802	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	76032929	76032942	76032936	Y	NA	NA	NA	NA	NA	NA	ADK	123969	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	76916394	76916800	76916595	Y	MYST4,SAMD8	NA	NA	NA	NA	NA	VDAC2	51112	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	76985148	76985510	76985329	Y	NA	VDAC2,COMTD1,HMGA1P5	NA	NA	NA	NA	COMTD1	8278	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	78698062	78698447	78698255	Y	NA	NA	NA	NA	NA	NA	KCNMA1	697906	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	78790288	78790415	78790352	Y	NA	NA	NA	NA	NA	NA	KCNMA1	605938	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	78792238	78792506	78792372	Y	NA	NA	NA	NA	NA	NA	KCNMA1	603847	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	78974815	78975138	78974939	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	421215	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	79006844	79007202	79006984	Y	NA	NA	NA	NA	NA	NA	KCNMA1	389151	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	79265772	79266169	79265902	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	130184	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	79291052	79291779	79291330	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	104574	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	79291885	79292096	79291976	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	104257	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	79314756	79315094	79314952	Y	NA	NA	NA	NA	NA	NA	KCNMA1	81259	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	79346819	79347304	79347005	Y	KCNMA1	KCNMA1	NA	NA	NA	NA	KCNMA1	49049	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	79636555	79636603	79636579	Y	NA	DLG5	NA	NA	NA	NA	DLG5	47775	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	80732492	80734123	80733460	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	92669	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	80734291	80734943	80734463	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	91849	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	80830818	80831199	80831077	Y	ZMIZ1	ZMIZ1	NA	NA	NA	NA	ZMIZ1	4026	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	80911539	80911799	80911619	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	84747	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr10	80912242	80912363	80912303	Y	NA	NA	NA	NA	NA	NA	ZMIZ1	85450	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	81028676	81029041	81028720	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	PPIF	76184	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	81077317	81078576	81077648	Y	ZMIZ1,PPIF	PPIF	NA	NA	NA	NA	PPIF	26649	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	81088418	81088982	81088641	Y	ZMIZ1,PPIF	PPIF	NA	NA	NA	NA	PPIF	16243	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	81091409	81091966	81091732	Y	ZMIZ1,PPIF	PPIF	NA	NA	NA	NA	PPIF	13259	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	81159335	81159579	81159503	Y	ZCCHC24	ZCCHC24	NA	NA	NA	NA	ZCCHC24	43804	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	81959510	81960003	81959818	Y	TSPAN14,SH2D4B,ANXA11	ANXA11,EIF5AP4	NA	NA	NA	NA	ANXA11	3325	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	82258642	82258780	82258737	Y	TSPAN14	TSPAN14	NA	NA	NA	NA	TSPAN14	46720	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	86104605	86104727	86104619	Y	NA	NA	NA	NA	NA	NA	CDHR1	152195	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	88470805	88471213	88471023	Y	NA	BMPR1A	NA	NA	NA	NA	BMPR1A	43194	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	92975258	92975295	92975277	Y	NA	PCGF5	NA	NA	NA	NA	PCGF5	2613	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	93373465	93373915	93373562	Y	PPP1R3C	PPP1R3C	NA	NA	NA	NA	PPP1R3C	16896	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr10	94351391	94351691	94351485	Y	CPEB3	IDE,KIF11	NA	NA	NA	NA	KIF11	348	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	95195782	95196689	95196040	Y	MYOF	MYOF	NA	NA	NA	NA	MYOF	43385	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	95218561	95218998	95218660	Y	MYOF	MYOF,CEP55	NA	NA	NA	NA	MYOF	21076	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	95225325	95225770	95225711	Y	MYOF	MYOF,CEP55	NA	NA	NA	NA	MYOF	14304	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	95228207	95228553	95228471	Y	MYOF,CEP55,CEP55	MYOF,CEP55	NA	NA	NA	NA	MYOF	11521	CAGE	1C3IKEI	hg19	FANTOM5	3.67501483253092
chr10	97308667	97309047	97308880	Y	NA	SORBS1	NA	NA	NA	NA	SORBS1	10124	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	97640254	97640658	97640438	Y	ENTPD1,ENTPD1	NA	NA	NA	NA	NA	RP11-248J23.5	117342	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	98308552	98308827	98308687	Y	LCOR,C10orf12,ZNF518A,PIK3AP1,TM9SF3	TM9SF3	NA	NA	NA	NA	TM9SF3	36382	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	99583674	99583743	99583710	Y	NA	GOLGA7B	NA	NA	NA	NA	GOLGA7B	42146	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	101765990	101766360	101766233	Y	NA	DNMBP	NA	NA	NA	NA	DNMBP	1316	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	102251433	102251647	102251567	Y	NA	HIF1AN,SEC31B,NDUFB8	NA	NA	NA	NA	HIF1AN	35182	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	102488726	102488983	102488821	Y	NA	NA	PAX2	IMR90	Hi-C	24141950	FAM178A	181343	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	103807032	103807259	103807146	Y	NA	C10orf76,HPS6	NA	NA	NA	NA	C10orf76	6691	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	104401686	104402330	104401988	Y	NA	NA	NA	NA	NA	NA	TRIM8	0	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr10	105001224	105001453	105001331	Y	C10orf32,NT5C2	NA	INA,PCGF6,NT5C2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NT5C2	50168	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	105456300	105456542	105456434	Y	NA	NA	NA	NA	NA	NA	OBFC1	219421	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	105650011	105650288	105650237	Y	GSTO2,GSTO1,MEIR5,MEIR5,COL17A1,SLK	OBFC1	SH3PXD2A	IMR90	Hi-C	24141950	OBFC1	25675	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	105667994	105668449	105668210	Y	GSTO1,GSTO1,SLK	OBFC1	NA	NA	NA	NA	OBFC1	7514	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	106209262	106209535	106209366	Y	NA	NA	NA	NA	NA	NA	ITPRIP	113100	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr10	111834173	111834352	111834276	Y	ADD3,SMNDC1,MXI1,MXI1	NA	NA	NA	NA	NA	ADD3	80047	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	112155518	112156031	112155808	Y	DUSP5	NA	SMC3,DUSP5	IMR90	Hi-C	24141950	SMNDC1	92809	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	112158460	112158738	112158533	Y	DUSP5	NA	SMC3,DUSP5	IMR90	Hi-C	24141950	SMNDC1	95751	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	112174147	112174523	112174256	Y	SMC3,DUSP5	NA	DUSP5,SMC3,SMNDC1	IMR90	Hi-C	24141950	DUSP5	81073	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	114531236	114531374	114531260	Y	NA	NA	NA	NA	NA	NA	TCF7L2	176635	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	121417930	121418047	121417978	Y	BAG3	RP11-179H18.5,BAG3	NA	NA	NA	NA	BAG3	9048	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	121829686	121829950	121829715	Y	NA	NA	NA	NA	NA	NA	SEC23IP	179463	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	123873239	123873409	123873290	Y	NA	NA	NA	NA	NA	NA	TACC2	126550	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr10	125754916	125755682	125755196	Y	CHST15	NA	NA	NA	NA	NA	CHST15	95524	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	127813462	127813834	127813648	Y	ADAM12	NA	FANK1	IMR90	Hi-C	24141950	FANK1	230354	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	127818825	127819054	127818951	Y	NA	NA	NA	NA	NA	NA	FANK1	235717	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	133763722	133764008	133763747	Y	NA	BNIP3	NA	NA	NA	NA	BNIP3	29427	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	133794080	133794414	133794353	Y	NA	BNIP3	PPP2R2D	IMR90	Hi-C	24141950	BNIP3	645	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr10	134260341	134260546	134260485	Y	C10orf91	C10orf91	NA	NA	NA	NA	C10orf91	4510	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr10	135092436	135092746	135092593	Y	ADAM8,TUBGCP2	ZNF511,TUBGCP2	NA	NA	NA	NA	ZNF511	27233	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	355877	356724	356385	Y	NA	IFITM1,IFITM3,B4GALNT4,PKP3	IFITM1,IFITM2,RIC8A,BET1L,ATHL1,PKP3	K562,MCF7	ChIA-PET	22265404	B4GALNT4	11072	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	926738	926879	926801	Y	BRSK2,CEND1,AP2A2	CHID1,AP2A2	NA	NA	NA	NA	AP2A2	3844	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	1073369	1073545	1073512	Y	DRD4,EFCAB4A	NA	NA	NA	NA	NA	MUC5AC	76035	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	1357863	1358286	1357997	Y	TOLLIP,BRSK2	TOLLIP	TOLLIP,LOC255512	K562	ChIA-PET	22265404	TOLLIP	28979	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	1404202	1404317	1404259	Y	IFITM10,DUSP8	BRSK2	TOLLIP,LOC255512,MUC5B,BRSK2,MOB2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BRSK2	4812	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	1879618	1879880	1879749	Y	NA	NA	NA	NA	NA	NA	AC068580.7	82000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	3742975	3743362	3743342	Y	NA	NA	NA	NA	NA	NA	PGAP2	73592	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr11	8723535	8723638	8723587	Y	STK33	RPL27A	NA	NA	NA	NA	RPL27A	21577	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	8756335	8756571	8756455	Y	ST5,ASCL3	NA	NA	NA	NA	NA	RPL27A	54377	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	9250767	9251109	9250945	Y	NA	DENND5A	NA	NA	NA	NA	DENND5A	33828	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	9385760	9386326	9386092	Y	ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7	IPO7	ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IPO7	17843	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	10003812	10004242	10004040	Y	ADM	NA	NA	NA	NA	NA	SBF2	309512	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	11998818	11999068	11999003	Y	MICALCL	DKK3	NA	NA	NA	NA	DKK3	30248	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	12309352	12309734	12309588	Y	TEAD1,DKK3,MICAL2,PARVA,MICALCL	NA	NA	NA	NA	NA	PARVA	86998	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	12824175	12824668	12824395	Y	TEAD1	NA	NA	NA	NA	NA	TEAD1	130206	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	13961618	13961770	13961694	Y	RRAS2	SPON1	SPON1	IMR90	Hi-C	24141950	SPON1	20144	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	14306265	14306627	14306419	Y	NA	NA	NA	NA	NA	NA	RRAS2	77425	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	14874249	14874576	14874405	Y	CYP2R1	CYP2R1	NA	NA	NA	NA	CYP2R1	37222	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	18404883	18405218	18405078	Y	LDHA	LDHA,LDHC	NA	NA	NA	NA	LDHA	8717	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	18444585	18444736	18444661	Y	SAAL1	LDHA,LDHC	NA	NA	NA	NA	LDHC	12731	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	20134058	20134420	20134284	Y	NA	NA	NA	NA	NA	NA	HTATIP2	248811	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	27683148	27683223	27683174	Y	NA	NA	NA	NA	NA	NA	BDNF	58382	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	27739901	27740316	27740092	Y	BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF	BDNF	NA	NA	NA	NA	BDNF	1289	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	28063321	28063497	28063482	Y	NA	NA	NA	NA	NA	NA	METTL15	64298	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	33181656	33182005	33181958	Y	NA	NA	NA	NA	NA	NA	CSTF3	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	33668919	33669067	33668993	Y	NA	NA	NA	NA	NA	NA	CD59	86924	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	34084271	34084310	34084291	Y	NA	CAPRIN1,NAT10	NA	NA	NA	NA	CAPRIN1	13041	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	34706877	34707176	34707110	Y	ABTB2,EHF	NA	NA	NA	NA	NA	PDHX	228200	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	35052236	35052689	35052493	Y	CD44	NA	SLC1A2,CD44,PDHX	IMR90	Hi-C	24141950	CD44	105728	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	35066599	35067152	35066916	Y	NA	NA	SLC1A2,CD44,PDHX	IMR90	Hi-C	24141950	CD44	91265	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	35103874	35105511	35104330	Y	CD44	NA	CD44,PDHX,APIP,SLC1A2	IMR90	Hi-C	24141950	CD44	52906	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr11	35180596	35180888	35180668	Y	CD44	CD44	NA	NA	NA	NA	CD44	22179	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	35188303	35189153	35188420	Y	CD44	CD44	NA	NA	NA	NA	CD44	29886	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	35204984	35205337	35205050	Y	CD44	CD44	NA	NA	NA	NA	CD44	46567	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	36171228	36171637	36171430	Y	TRAF6,COMMD9	NA	NA	NA	NA	NA	COMMD9	137362	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	43360196	43360553	43360375	Y	TTC17	API5,TTC17	NA	NA	NA	NA	TTC17	17929	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	45201958	45202605	45202216	Y	NA	NA	NA	NA	NA	NA	TP53I11	231118	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	46004522	46004898	46004712	Y	NA	NA	NA	NA	NA	NA	GYLTL1B	63350	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	46258702	46259233	46258865	Y	DGKZ	NA	PHF21A,DGKZ,CREB3L1,MDK	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	DGKZ	93222	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	46264726	46265198	46265009	Y	NA	NA	DGKZ,PHF21A,CREB3L1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	DGKZ	87257	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	46753121	46753488	46753304	Y	F2	ARHGAP1,ZNF408	NA	NA	NA	NA	ZNF408	32753	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	47573563	47574025	47573747	Y	NR1H3,SPI1,PTPRJ,CELF1,CELF1,CELF1	NDUFS3,PTPMT1,CELF1,KBTBD4	NA	NA	NA	NA	NDUFS3	10863	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr11	47789923	47790126	47789984	Y	NA	FNBP4	NA	NA	NA	NA	FNBP4	2928	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	48029262	48029517	48029420	Y	CELF1,CELF1,FNBP4,PTPRJ	PTPRJ	NA	NA	NA	NA	PTPRJ	29149	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	57546018	57546724	57546105	Y	MED19,C11orf31	C11orf31,CTNND1	NA	NA	NA	NA	CTNND1	27303	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	61523945	61524112	61524089	Y	INCENP,DAK,C11orf9	FEN1,TMEM258,FADS2	NA	NA	NA	NA	FEN1	33997	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	62211626	62212261	62212170	Y	FTH1,STX5,SLC3A2,NXF1,EML3,AHNAK	NA	NA	NA	NA	NA	ASRGL1	108706	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	62264935	62265137	62265063	Y	WDR74,STX5,SLC3A2,NXF1,EML3	NA	NA	NA	NA	NA	AHNAK	56570	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	62320979	62321244	62321106	Y	NA	AHNAK,EEF1G,MIR3654,TUT1,MTA2	NA	NA	NA	NA	AHNAK	463	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	63858567	63858836	63858756	Y	NA	NA	NA	NA	NA	NA	MACROD1	72742	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr11	64102702	64102834	64102750	Y	NA	ESRRA,TRMT112,PRDX5,RPS6KA4	NA	NA	NA	NA	PRDX5	19142	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	64636604	64637051	64636910	Y	CDC42EP2,SF1,SF1,FAU,EHD1	EHD1,ATG2A,PPP2R5B	NA	NA	NA	NA	EHD1	16717	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	65151984	65152145	65152131	Y	NA	TIGD3,NEAT1	NA	NA	NA	NA	FRMD8	0	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr11	65185589	65187086	65186338	Y	NA	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	1159	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	65187297	65188198	65187553	Y	BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	47	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	65244638	65245303	65245021	Y	BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1,SCYL1	SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MALAT1	17930	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr11	65264635	65265953	65265057	Y	NA	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	1402	CAGE	1C3IKEI	hg19	FANTOM5	7.96253213715032
chr11	65323331	65323567	65323509	Y	FOSL1	SCYL1,LTBP3,SSSCA1,FAM89B,EHBP1L1	NA	NA	NA	NA	LTBP3	834	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	65420425	65420654	65420491	Y	TIGD3,SLC25A45,MAP3K11,SNX32,PACS1,GAL3ST3,CTSW,SIPA1,SIPA1,KAT5	MAP3K11,PCNXL3,SIPA1,RELA	NA	NA	NA	NA	RELA	7911	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	65666492	65667203	65666864	Y	RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B	MUS81,CFL1,EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1	NA	NA	NA	NA	FOSL1	448	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr11	65678943	65679154	65679019	Y	RIN1,BRMS1,SCYL1,SSSCA1,CFL1,FIBP,CCDC85B,YIF1A,SF3B2,RAB1B,KLC2,FOSL1,SART1,DRAP1,C11orf68,BANF1	EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1	NA	NA	NA	NA	C11orf68	5434	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr11	65683105	65683625	65683322	Y	NA	EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1	NA	NA	NA	NA	C11orf68	963	CAGE	1C3IKEI	hg19	FANTOM5	24.5000988835395
chr11	65782974	65783337	65783107	Y	FOSL1	BANF1,EIF1AD,CATSPER1,SF3B2	NA	NA	NA	NA	CATSPER1	8651	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr11	67139742	67140272	67140082	Y	NA	POLD4,AP003419.11,RAD9A,PPP1CA	NA	NA	NA	NA	AP003419.11	687	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	68140094	68140551	68140382	Y	NA	NA	NA	NA	NA	NA	LRP5	62017	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	68147876	68148306	68148095	Y	NA	NA	NA	NA	NA	NA	LRP5	69799	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr11	69182957	69183170	69183095	Y	ORAOV1,CCND1,MYEOV	NA	CCND1,MYEOV	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	MYEOV	123352	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	69453520	69454472	69453912	Y	NA	ORAOV1	NA	NA	NA	NA	CCND1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	69795546	69795838	69795683	Y	ANO1	NA	ANO1,ORAOV1,FGF4,FADD	IMR90	Hi-C	24141950	FADD	251431	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	70245269	70246141	70245676	Y	ANO1,FADD,PPFIA1,CTTN	CTTN,AP000487.5	NA	NA	NA	NA	AP000487.5	2675	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	71702677	71703050	71702869	Y	FOLR3,IL18BP,IL18BP	NA	NA	NA	NA	NA	RNF121	64930	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	73490470	73490918	73490608	Y	UCP2	RAB6A,MRPL48	MRPL48,CHCHD8,PAAF1,RAB6A	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MRPL48	5443	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	74465903	74466299	74466070	Y	POLD3,RNF169	CHRDL2,RP11-864N7.2,RNF169	XRRA1	IMR90	Hi-C	24141950	RNF169	7990	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	74534779	74535147	74534795	Y	XRRA1,RNF169	NA	NA	NA	NA	NA	RNF169	76866	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr11	76480789	76480971	76480905	Y	NA	TSKU,RP11-21L23.3	B3GNT6,TSKU,GUCY2E,ACER3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TSKU	10324	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr11	76802149	76802401	76802277	Y	NA	CAPN5	NA	NA	NA	NA	CAPN5	26170	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	81877588	81877688	81877592	Y	NA	NA	NA	NA	NA	NA	RP11-742N3.1	520883	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	83278002	83278167	83278160	Y	NA	NA	NA	NA	NA	NA	CCDC90B	282552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	83448603	83448921	83448762	Y	NA	NA	NA	NA	NA	NA	CCDC90B	453153	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	85521123	85521272	85521226	Y	SYTL2,SYTL2	SYTL2	NA	NA	NA	NA	SYTL2	939	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	86178922	86179317	86178974	Y	NA	NA	NA	NA	NA	NA	C11orf73	167669	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	86222200	86222363	86222315	Y	NA	NA	NA	NA	NA	NA	ME3	159315	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	86381936	86382132	86382071	Y	NA	ME3	NA	NA	NA	NA	ME3	258	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	86430919	86431170	86431045	Y	PRSS23	ME3	PRSS23,ME3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ME3	49241	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	86454484	86454767	86454607	Y	NA	PRSS23	PRSS23,ME3,CCDC81	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PRSS23	45334	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	87043104	87043447	87043253	Y	NA	NA	NA	NA	NA	NA	TMEM135	296218	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	96040167	96040456	96040282	Y	MAML2	MAML2	NA	NA	NA	NA	MAML2	33888	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	102631066	102631384	102631342	Y	BIRC2	MMP1	NA	NA	NA	NA	MMP1	35507	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	105090888	105091203	105091058	Y	CASP4,CASP4,CASP5,CARD16,CARD17	NA	NA	NA	NA	NA	CASP4	252725	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	108600247	108600616	108600285	Y	NA	NA	NA	NA	NA	NA	DDX10	66495	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	113828537	113828676	113828607	Y	NA	NA	NA	NA	NA	NA	USP28	84245	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	113945404	113945849	113945581	Y	ZBTB16,ZBTB16	NA	NA	NA	NA	NA	NNMT	180660	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	115092334	115092489	115092415	Y	NA	NA	NA	NA	NA	NA	CADM1	281186	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	115360673	115361056	115361024	Y	CADM1	CADM1	NA	NA	NA	NA	CADM1	12619	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	117016262	117016599	117016456	Y	NA	SIK3,PAFAH1B2,SIDT2	NA	NA	NA	NA	PAFAH1B2	3279	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	118481750	118482023	118481896	Y	PHLDB1	ARCN1,IFT46,PHLDB1	NA	NA	NA	NA	PHLDB1	6595	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	118490168	118490609	118490335	Y	PHLDB1	ARCN1,IFT46,PHLDB1	NA	NA	NA	NA	PHLDB1	15013	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	118663387	118663780	118663691	Y	NA	DDX6	NA	NA	NA	NA	DDX6	3529	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	118782911	118783378	118783221	Y	SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84	MIR4492,BCL9L	NA	NA	NA	NA	MIR4492	3494	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr11	118791529	118792348	118792152	Y	PHLDB1,BCL9L	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	1969	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	119465443	119465711	119465599	Y	CBL	KRT8P7	LOC100499227,USP2,PVRL1,TRIM29,GRIK4	IMR90	Hi-C	24141950	KRT8P7	7307	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	121199399	121199704	121199552	Y	NA	NA	NA	NA	NA	NA	SORL1	121208	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	122586167	122586342	122586202	Y	NA	NA	NA	NA	NA	NA	UBASH3B	61784	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	122936469	122936659	122936561	Y	NA	RPL34P23,HSPA8	NA	NA	NA	NA	HSPA8	4531	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	123335007	123335161	123335084	Y	NA	AP000783.1,LINC01059	CLMP,HSPA8,MIR4493	IMR90	Hi-C	24141950	LINC01059	11901	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	123381868	123382248	123382089	Y	SCN3B,GRAMD1B	NA	GRAMD1B	IMR90	Hi-C	24141950	LINC01059	58762	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	124514246	124514548	124514258	Y	OR8G1,OR8D1,OR8D2,OR8B4,OR8B8,OR8B12,OR8A1	TBRG1,SPA17,SIAE	NA	NA	NA	NA	TBRG1	23514	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	125033403	125033516	125033451	Y	NA	PKNOX2	NA	NA	NA	NA	PKNOX2	820	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	128339730	128340284	128340256	Y	FLI1,FLI1,ETS1	NA	NA	NA	NA	NA	ETS1	115169	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	128352415	128352744	128352497	Y	FLI1,FLI1,ETS1	NA	NA	NA	NA	NA	ETS1	102709	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	128376891	128377234	128377096	Y	ETS1	NA	NA	NA	NA	NA	ETS1	78219	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	128377315	128377487	128377422	Y	FLI1,FLI1,ETS1	NA	NA	NA	NA	NA	ETS1	77966	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr11	128579282	128579748	128579400	Y	FLI1,FLI1	FLI1	NA	NA	NA	NA	FLI1	24852	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	128589113	128589189	128589151	Y	NA	FLI1	NA	NA	NA	NA	FLI1	34683	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	128605969	128606121	128606047	Y	ETS1,FLI1,FLI1	NA	NA	NA	NA	NA	FLI1	51539	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	131469236	131469635	131469288	Y	NA	NA	NA	NA	NA	NA	SNX19	684832	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr11	134708086	134708460	134708277	Y	NA	NA	LOC283177	IMR90	Hi-C	24141950	B3GAT1	428274	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	574296	574697	574406	Y	B4GALNT3	B4GALNT3	NA	NA	NA	NA	B4GALNT3	6766	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	1925056	1925234	1925157	Y	NA	NA	NA	NA	NA	NA	RPS4XP14	59879	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	2862367	2862509	2862453	Y	NA	FKBP4	NA	NA	NA	NA	FKBP4	39610	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	6432315	6432644	6432443	Y	NA	TNFRSF1A,LTBR	NA	NA	NA	NA	TNFRSF1A	16636	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	6445143	6445640	6445507	Y	VAMP1,TAPBPL,CHD4,CD4,CD4,TNFRSF1A	TNFRSF1A,LTBR	NA	NA	NA	NA	TNFRSF1A	3640	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	7034730	7034838	7034794	Y	ACSM4,PTMS,PHB2,PHB2,EMG1,USP5,USP5,SPSB2,SPSB2,ATN1	SPSB2,ENO2,ATN1,C12orf57,RNU7-1,EMG1,SCARNA12,PHB2	NA	NA	NA	NA	ATN1	3104	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	8123169	8123746	8123395	Y	CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3	SLC2A3	SLC2A3,FOXJ2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC2A3	36298	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	12016846	12017194	12017120	Y	ETV6,BCL2L14	NA	NA	NA	NA	NA	ETV6	216058	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	13025126	13025347	13025203	Y	NA	RPL13AP20,GPRC5A,MIR614	NA	NA	NA	NA	RPL13AP20	1086	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr12	13229599	13229845	13229722	Y	NA	KIAA1467	NA	NA	NA	NA	KIAA1467	34381	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	13253893	13254547	13254171	Y	CDKN1B,EMP1	NA	NA	NA	NA	NA	KIAA1467	58675	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	13255105	13255488	13255167	Y	EMP1	NA	NA	NA	NA	NA	KIAA1467	59887	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	13359236	13359687	13359415	Y	EMP1	EMP1	NA	NA	NA	NA	EMP1	11586	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr12	22654594	22654831	22654713	Y	NA	NA	NA	NA	NA	NA	ETNK1	121178	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	25539082	25539407	25539207	Y	NA	RNU4-67P	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNU4-67P	15955	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr12	26130090	26130317	26130202	Y	NA	RASSF8,RASSF8-AS1	NA	NA	NA	NA	RASSF8-AS1	19392	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	26267263	26267811	26267415	Y	NA	SSPN,BHLHE41,RP11-283G6.3	NA	NA	NA	NA	SSPN	5113	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	27613510	27613909	27613776	Y	NA	NA	NA	NA	NA	NA	PPFIBP1	60455	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr12	27678444	27678624	27678473	Y	PPFIBP1	PPFIBP1	NA	NA	NA	NA	PPFIBP1	4080	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr12	28119724	28120118	28120115	Y	MANSC4,PTHLH,PTHLH	NA	NA	NA	NA	NA	CCDC91	164064	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	28221546	28221662	28221604	Y	NA	NA	NA	NA	NA	NA	CCDC91	62520	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	29473475	29473492	29473484	Y	NA	NA	NA	NA	NA	NA	ERGIC2	58630	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	29487594	29487680	29487637	Y	NA	ERGIC2	NA	NA	NA	NA	ERGIC2	44442	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	31523933	31524084	31523973	Y	DDX11,METTL20,FAM60A,FAM60A	FAM60A	NA	NA	NA	NA	FAM60A	45941	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	31789524	31789538	31789533	Y	NA	DENND5B-AS1,DENND5B,METTL20	DENND5B,METTL20	IMR90	Hi-C	24141950	METTL20	8556	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	31902136	31902566	31902240	Y	C12orf35,AMN1,H3F3C	AMN1,H3F3C	AMN1	K562	ChIA-PET	22265404	AMN1	22028	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	42825856	42826146	42826103	Y	YAF2,YAF2,YAF2	NA	NA	NA	NA	NA	ZCRB1	107936	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	45627812	45628672	45628351	Y	ANO6,ANO6	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	19988	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	45654086	45654401	45654190	Y	NA	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	46262	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	46571353	46571525	46571439	Y	NA	NA	NA	NA	NA	NA	SLC38A1	90275	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	46786554	46786766	46786571	Y	NA	SLC38A2,RP11-96H19.1	NA	NA	NA	NA	RP11-96H19.1	11092	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	46824163	46824471	46824386	Y	NA	RP11-96H19.1	SLC38A2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	48701	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	46866769	46866797	46866784	Y	NA	NA	SLC38A2,SLC38A4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	91307	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	46888080	46888552	46888358	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	112618	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	46917975	46918280	46918143	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1,AMIGO2	IMR90	Hi-C	24141950	RP11-96H19.1	142513	CAGE	1C3IKEI	hg19	FANTOM5	3.67501483253092
chr12	46956686	46956942	46956800	Y	SLC38A2	NA	SLC38A2	IMR90	Hi-C	24141950	RP11-96H19.1	181224	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	47074564	47074850	47074707	Y	NA	NA	SLC38A1,SLC38A2,SLC38A4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	299102	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	47474423	47475249	47474825	Y	NA	AMIGO2	NA	NA	NA	NA	AMIGO2	2689	CAGE	1C3IKEI	hg19	FANTOM5	10.10629078946
chr12	47701468	47701752	47701723	Y	NA	NA	AMIGO2,MIR4698,LOC100233209,FAM113B	IMR90	Hi-C	24141950	AMIGO2	229734	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	48431282	48431505	48431439	Y	NA	NA	NA	NA	NA	NA	PFKM	65417	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	49678404	49678529	49678467	Y	NA	TROAP	NA	NA	NA	NA	TROAP	36490	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	49801773	49801917	49801846	Y	NA	SPATS2	NA	NA	NA	NA	SPATS2	43406	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	50019907	50020190	50020017	Y	NA	NA	NA	NA	NA	NA	PRPF40B	59906	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	50056796	50057319	50056974	Y	TMBIM6,NCKAP5L,FMNL3	TMBIM6,FMNL3	NA	NA	NA	NA	TMBIM6	42189	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	50460197	50460562	50460363	Y	NA	RACGAP1,SMARCD1	NA	NA	NA	NA	SMARCD1	16193	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	50902358	50902765	50902415	Y	NA	DIP2B	NA	NA	NA	NA	DIP2B	5590	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	51787794	51788248	51788116	Y	SLC11A2,SLC11A2,SLC11A2,CSRNP2,DAZAP2,GALNT6	SLC4A8,GALNT6	NA	NA	NA	NA	GALNT6	3143	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	52184760	52184919	52184839	Y	NA	NA	NA	NA	NA	NA	ACVR1B	158532	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	52241760	52242326	52241842	Y	SLC4A8,FIGNL2	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	101125	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	52419301	52419935	52419633	Y	NR4A1,GRASP,NR4A1	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	4685	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	52540237	52540565	52540533	Y	NA	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	43219	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	52540964	52541526	52541224	Y	KRT80,KRT7,KRT6A,KRT5,NR4A1,C12orf44	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	42258	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr12	52557711	52558022	52557822	Y	NA	KRT80	NA	NA	NA	NA	KRT80	25762	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	52582905	52583052	52582979	Y	ACVR1B,NR4A1	KRT80,KRT7	NA	NA	NA	NA	KRT80	732	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	52674043	52674518	52674247	Y	NR4A1,C12orf44,KRT84,KRT6A,KRT5,KRT80	KRT7,KRT86,KRT81	NA	NA	NA	NA	KRT81	8800	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	53267781	53268340	53268093	Y	PFDN5	NA	KRT18,KRT8,LOC283403,EIF4B,KRT80,LOC283404	MCF7	ChIA-PET	22265404	KRT18	72315	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	53284889	53285178	53285173	Y	ZNF740,SP1,KRT8,KRT18,KRT18	NA	NA	NA	NA	NA	KRT18	55477	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	53615195	53615822	53615501	Y	CSAD,SP1,PRR13,PFDN5	ZNF740,CSAD,RARG,MFSD5,ESPL1	NA	NA	NA	NA	RARG	8942	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	53765037	53765535	53765115	Y	CSAD,ITGB7,PFDN5,SP1,SP1,PRR13	AAAS,SP1	SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SP1	6425	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	54411861	54412590	54411908	Y	COPZ1,ATP5G2,HOXC10,HOXC9,HOXC8,HOXC4,HOXC6,HOXC5,HOXC4	HOXC10,HOXC6,HOXC9,HOXC-AS1,HOXC8,HOXC5,HOXC4	NA	NA	NA	NA	HOXC8	11029	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	54413878	54414161	54414065	Y	HOXC9,HOXC8,HOXC4,HOXC6,HOXC5	HOXC10,HOXC6,HOXC9,HOXC-AS1,HOXC8,HOXC5,HOXC4	NA	NA	NA	NA	HOXC5	10476	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	54563652	54563918	54563802	Y	NA	SMUG1	NA	NA	NA	NA	SMUG1	16860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	54752671	54753884	54753119	Y	NCKAP1L,ITGA5,ZNF385A,GPR84	NA	NA	NA	NA	NA	ITGA5	57360	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	56150085	56150369	56150213	Y	OR6C6,IKZF4	BLOC1S1,RP11-644F5.11,CD63,GDF11	NA	NA	NA	NA	GDF11	15021	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	56856452	56856620	56856542	Y	NA	TIMELESS,SPRYD4,RP11-153M3.1	MIP,TIMELESS	MCF7	ChIA-PET	22265404	SPRYD4	3681	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	57028610	57029302	57028864	Y	NA	BAZ2A,ATP5B	NA	NA	NA	NA	BAZ2A	10	CAGE	1C3IKEI	hg19	FANTOM5	6.12502472088487
chr12	57079143	57079532	57079338	Y	NA	ATP5B,PTGES3,NACA	NA	NA	NA	NA	PTGES3	627	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	57473637	57473855	57473746	Y	NA	TMEM194A,NAB2,LRP1	NA	NA	NA	NA	TMEM194A	5991	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	59300729	59300915	59300862	Y	LRIG3,LRIG3	LRIG3	NA	NA	NA	NA	LRIG3	11388	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	63096618	63097002	63096657	Y	NA	NA	NA	NA	NA	NA	C12orf61	101404	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	63118880	63119001	63118911	Y	NA	NA	NA	NA	NA	NA	C12orf61	123666	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64311746	64312216	64311964	Y	NA	NA	NA	NA	NA	NA	SRGAP1	75673	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64336767	64336917	64336914	Y	NA	NA	NA	NA	NA	NA	SRGAP1	100694	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64386107	64386411	64386216	Y	NA	NA	NA	NA	NA	NA	SRGAP1	150034	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64482177	64482504	64482346	Y	SRGAP1,TBK1,C12orf66	NA	NA	NA	NA	NA	C12orf66	131572	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64544712	64545066	64544890	Y	SRGAP1	NA	NA	NA	NA	NA	C12orf66	69010	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64718599	64718738	64718727	Y	NA	NA	NA	NA	NA	NA	C12orf56	64234	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	64855437	64855720	64855602	Y	C12orf66,TBK1	TBK1	NA	NA	NA	NA	TBK1	11777	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	65019058	65019979	65019210	Y	TBK1,RASSF3,GNS	RASSF3	NA	NA	NA	NA	RASSF3	16765	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	66048868	66049228	66049091	Y	NA	NA	RPSAP52,HMGA2,MSRB3	IMR90	Hi-C	24141950	RP11-221N13.3	54219	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	66135126	66135637	66135353	Y	HMGA2	NA	NA	NA	NA	NA	HMGA2	80274	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr12	66136008	66136292	66136116	Y	HMGA2	NA	NA	NA	NA	NA	HMGA2	79619	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	66286698	66286979	66286899	Y	IRAK3	NA	NA	NA	NA	NA	RP11-366L20.3	53280	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	66292016	66292293	66292025	Y	NA	RP11-366L20.3	NA	NA	NA	NA	RP11-366L20.3	47966	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	66311039	66311339	66311117	Y	HMGA2	RP11-366L20.3	NA	NA	NA	NA	RP11-366L20.3	28920	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	66319590	66319707	66319630	Y	IRAK3	RP11-366L20.3	NA	NA	NA	NA	RP11-366L20.3	20552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	68758917	68759565	68759229	Y	IFNG,RAP1B	MDM1	RAP1B,NUP107,LOC100507250	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MDM1	34756	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	69036661	69037118	69036873	Y	NA	RAP1B,RP11-254B13.3,NUP107	NA	NA	NA	NA	RP11-254B13.3	1888	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr12	69686526	69686874	69686654	Y	NA	NA	NA	NA	NA	NA	CPSF6	55209	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	70633612	70633702	70633681	Y	NA	CNOT2,RP11-611E13.2	NA	NA	NA	NA	CNOT2	1072	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	70634012	70634396	70634290	Y	RAB3IP,KCNMB4,CNOT2,CNOT2,CNOT2	CNOT2,RP11-611E13.2	NA	NA	NA	NA	CNOT2	378	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	76375899	76376264	76376114	Y	NA	RP11-114H23.1,PHLDA1	PHLDA1,KRR1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-114H23.1	104	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	76414369	76415079	76414685	Y	NA	RP11-114H23.1,PHLDA1	NA	NA	NA	NA	PHLDA1	10633	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	77377580	77377874	77377727	Y	NA	NA	ZDHHC17	IMR90	Hi-C	24141950	E2F7	79486	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	77456593	77456922	77456786	Y	E2F7	E2F7	NA	NA	NA	NA	E2F7	438	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	78238066	78238311	78238190	Y	NA	NAV3	NA	NA	NA	NA	NAV3	15381	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	78398192	78398473	78398333	Y	NA	NA	NA	NA	NA	NA	NAV3	175507	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	78398581	78398785	78398710	Y	NA	NA	NA	NA	NA	NA	NAV3	175896	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	79943391	79943637	79943513	Y	NA	NA	SYT1,PPP1R12A,PAWR	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PAWR	139240	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	83134280	83134513	83134356	Y	NA	NA	NA	NA	NA	NA	TMTC2	55621	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	88968059	88968366	88968242	Y	NA	KITLG	NA	NA	NA	NA	KITLG	4262	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	89458658	89458863	89458774	Y	DUSP6	NA	POC1B,DUSP6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DUSP6	286185	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	90484866	90485476	90485213	Y	ATP2B1	NA	NA	NA	NA	NA	ATP2B1	383789	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	90500380	90500398	90500381	Y	NA	NA	C12orf37,ATP2B1,POC1B	IMR90	Hi-C	24141950	ATP2B1	399303	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	92517978	92518398	92518142	Y	BTG1	RP11-796E2.4,BTG1	NA	NA	NA	NA	RP11-796E2.4	18951	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	94179016	94179409	94179114	Y	NA	NA	NA	NA	NA	NA	CRADD	109865	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	94954640	94954945	94954835	Y	NA	NA	NA	NA	NA	NA	TMCC3	87393	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	95680646	95681018	95680718	Y	NA	NA	NA	NA	NA	NA	VEZT	71124	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	96027120	96027372	96027186	Y	LTA4H	NA	NTN4	IMR90	Hi-C	24141950	USP44	83854	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	96047992	96048216	96048102	Y	METAP2,LTA4H	NA	NA	NA	NA	NA	USP44	104726	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	96589359	96589977	96589479	Y	LTA4H,ELK3	ELK3	NA	NA	NA	NA	ELK3	3199	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	96627063	96627293	96627178	Y	NA	ELK3	NA	NA	NA	NA	ELK3	40903	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	96649758	96650321	96650168	Y	ELK3,CDK17	NA	NA	NA	NA	NA	ELK3	63598	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	96659033	96659395	96659303	Y	NA	NA	NA	NA	NA	NA	ELK3	72873	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	102734344	102734692	102734517	Y	NA	NA	IGF1	IMR90	Hi-C	24141950	NUP37	222442	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	105020354	105020448	105020373	Y	NA	NA	NA	NA	NA	NA	CHST11	173281	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	107363542	107363991	107363752	Y	NA	C12orf23,MTERFD3	NA	NA	NA	NA	MTERFD3	14953	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	107377522	107377900	107377585	Y	RFX4,RIC8B,MTERFD3	C12orf23,MTERFD3	NA	NA	NA	NA	MTERFD3	1044	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	108297283	108297694	108297638	Y	NA	NA	NA	NA	NA	NA	PRDM4	144234	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr12	108699402	108699607	108699511	Y	CORO1C,SELPLG	CMKLR1	NA	NA	NA	NA	CMKLR1	31511	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	109010746	109010939	109010889	Y	USP30,SSH1,CMKLR1,SELPLG,SELPLG	NA	NA	NA	NA	NA	ISCU	56388	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	109088465	109088864	109088838	Y	SSH1,CORO1C	CORO1C	NA	NA	NA	NA	CORO1C	34508	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	109209396	109209677	109209591	Y	NA	SSH1	NA	NA	NA	NA	SSH1	39689	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	109248007	109248657	109248411	Y	SELPLG,CORO1C,SSH1	SSH1	NA	NA	NA	NA	SSH1	709	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	110707461	110707714	110707625	Y	NA	ATP2A2	ANKRD13A,ATP2A2,C12orf76,GIT2,IFT81	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ATP2A2	8847	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	110867136	110867499	110867318	Y	NA	ANAPC7,HMGA1P3,ARPC3,GPN3	NA	NA	NA	NA	HMGA1P3	1049	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	111043428	111043840	111043517	Y	ARPC3,PPTC7,HVCN1,HVCN1	PPTC7,TCTN1	GPN3,FAM216A,RAD9B,PPTC7,C12orf76,TCTN1,ARPC3,VPS29,HVCN1,PPP1CC	IMR90	Hi-C	24141950	TCTN1	5992	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	111842634	111842962	111842759	Y	NA	FAM109A,SH2B3	NA	NA	NA	NA	SH2B3	882	CAGE	1C3IKEI	hg19	FANTOM5	4.90001977670789
chr12	111847615	111848064	111847953	Y	ALDH2,FAM109A,SH2B3	FAM109A,SH2B3	NA	NA	NA	NA	SH2B3	5863	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	112341708	112342051	112341878	Y	ATXN2,BRAP,MAPKAPK5,NAA25,C12orf51,TMEM116	NA	NA	NA	NA	NA	MAPKAPK5	63926	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	112464061	112464211	112464136	Y	NA	TMEM116,ERP29	NA	NA	NA	NA	ERP29	14941	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	112545862	112545946	112545885	Y	NA	NAA25,TRAFD1	NA	NA	NA	NA	NAA25	1036	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	113630509	113630869	113630677	Y	NA	DDX54,TPCN1,IQCD	NA	NA	NA	NA	DDX54	9225	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	115105863	115106455	115106375	Y	TBX3	TBX3	NA	NA	NA	NA	TBX3	13514	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	115138813	115139195	115139097	Y	TBX3	TBX3	TBX3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBX3	18844	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	116362516	116362609	116362584	Y	MED13L	NA	NA	NA	NA	NA	MED13L	350534	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	116661909	116662288	116662266	Y	NA	NA	NA	NA	NA	NA	MED13L	50855	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	118745418	118745709	118745623	Y	NA	NA	NA	NA	NA	NA	TAOK3	63041	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	120668258	120668871	120668569	Y	RAB35,DYNLL1,GCN1L1,RPLP0,PXN	GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1	NA	NA	NA	NA	PXN-AS1	31164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	120956227	120956384	120956265	Y	COQ5	RNF10,COQ5	NA	NA	NA	NA	RNF10	12899	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	121460857	121460983	121460961	Y	NA	C12orf43,OASL	NA	NA	NA	NA	C12orf43	8552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	121497390	121497638	121497514	Y	OASL	C12orf43,OASL	SPPL3,UNC119B,ACADS,C12orf43,HNF1A,OASL,LOC100506668,DYNLL1,MLEC,P2RX7,P2RX4,CAMKK2	IMR90	Hi-C	24141950	OASL	22345	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	121714857	121715111	121714996	Y	OASL,P2RX7,P2RX4,CAMKK2	CAMKK2	NA	NA	NA	NA	CAMKK2	19000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	121839154	121839422	121839290	Y	C12orf43,RHOF,KDM2B,RNF34	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	3310	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	122028609	122028883	122028798	Y	RNF34,KDM2B,SETD1B,RHOF,ORAI1	RP13-941N14.1,KDM2B,ORAI1	KDM2B	K562	ChIA-PET	22265404	KDM2B	11689	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	122067749	122067897	122067832	Y	ORAI1	ORAI1,MORN3	NA	NA	NA	NA	ORAI1	5294	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	122124782	122125118	122124936	Y	P2RX4,CAMKK2,WDR66,WDR66,HPD,MORN3	MORN3,TMEM120B	MORN3,LOC338799,SETD1B	K562,MCF7	ChIA-PET	22265404	MORN3	16245	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	122908043	122908483	122908329	Y	ZCCHC8,DENR,CLIP1	CLIP1	NA	NA	NA	NA	CLIP1	2864	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr12	124907545	124908050	124907792	Y	NA	NA	NA	NA	NA	NA	NCOR2	142085	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr12	124937911	124938596	124938282	Y	UBC,NCOR2	NA	NA	NA	NA	NA	NCOR2	111539	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	125027797	125027993	125027883	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	22142	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	125030582	125031087	125030838	Y	NA	NCOR2	NA	NA	NA	NA	NCOR2	19048	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	125050856	125051375	125051213	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	721	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr12	125110878	125111184	125111029	Y	UBC,NCOR2	NA	NCOR2,ZNF664-FAM101A	IMR90	Hi-C	24141950	NCOR2	60743	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	125204801	125205082	125204928	Y	UBC	NA	NCOR2,ZNF664-FAM101A	IMR90	Hi-C	24141950	NCOR2	154666	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	125221717	125221873	125221796	Y	NCOR2,UBC	NA	NCOR2	IMR90	Hi-C	24141950	SCARB1	143341	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	132232542	132232780	132232661	Y	DDX51	SFSWAP	NA	NA	NA	NA	SFSWAP	38916	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	132345340	132345736	132345589	Y	SFSWAP,ULK1	MMP17,ULK1	NA	NA	NA	NA	ULK1	31460	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr12	132368164	132368433	132368235	Y	NA	ULK1,PUS1	SFSWAP,ULK1,EP400,PUS1	IMR90	Hi-C	24141950	ULK1	8763	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	132647278	132647407	132647355	Y	SFSWAP,ULK1,FBRSL1	DDX51,NOC4L,RP13-977J11.2	NA	NA	NA	NA	NOC4L	20285	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	132970087	132970237	132970177	Y	CHFR,ANKLE2,FBRSL1	NA	GALNT9,LOC100130238,P2RX2,POLE,DDX51,NOC4L,LOC100507055,FBRSL1,EP400NL	IMR90	Hi-C	24141950	GALNT9	66152	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr12	133021534	133022956	133022670	Y	POLE,DDX51,FBRSL1	FBRSL1	LOC100507055,FBRSL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FBRSL1	41181	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr12	133065143	133065512	133065289	Y	NA	FBRSL1	NA	NA	NA	NA	FBRSL1	1006	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr12	133688468	133688629	133688567	Y	NA	ZNF140,ZNF891,ZNF10,ZNF268	NA	NA	NA	NA	ZNF891	16430	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	21405905	21405971	21405953	Y	NA	NA	NA	NA	NA	NA	N6AMT2	59808	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	21517643	21517924	21517794	Y	LATS2	XPO4	CRYL1,SKA3,MRP63,LATS2,SAP18	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	XPO4	42456	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	21607254	21607660	21607524	Y	NA	RNU4-9P,LATS2	NA	NA	NA	NA	RNU4-9P	3146	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	21893563	21893874	21893643	Y	NA	MIPEPP3	ZDHHC20	IMR90	Hi-C	24141950	MIPEPP3	23285	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	22135396	22135683	22135678	Y	EFHA1	NA	NA	NA	NA	NA	RPS7P10	65471	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	24062649	24062979	24062814	Y	NA	NA	NA	NA	NA	NA	SACS	56808	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	24289001	24289462	24289192	Y	PCOTH	NA	NA	NA	NA	NA	TNFRSF19	146492	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	25485313	25485583	25485398	Y	PARP4,PABPC3,NUPL1,MTMR6	CENPJ	NA	NA	NA	NA	CENPJ	9435	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	27728821	27729155	27728988	Y	USP12	USP12	NA	NA	NA	NA	USP12	14878	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	28006253	28006341	28006297	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	GTF3A	9572	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	28025291	28025563	28025486	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	MTIF3	2552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	28167075	28167372	28167253	Y	NA	LNX2,POLR1D	NA	NA	NA	NA	LNX2	25169	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	29148829	29149214	29148994	Y	POMP	EIF4A1P7	FLT1	IMR90	Hi-C	24141950	EIF4A1P7	21756	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	29290769	29291025	29290846	Y	POMP	SLC46A3	NA	NA	NA	NA	SLC46A3	82	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr13	30812389	30812594	30812492	Y	NA	NA	NA	NA	NA	NA	KATNAL1	67027	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	31371316	31371638	31371482	Y	NA	NA	ALOX5AP,USPL1,KATNAL1,HMGB1,UBL3,TEX26-AS1,C13orf33,TEX26	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	USPL1	181486	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	34253090	34253722	34253494	Y	NA	NA	NA	NA	NA	NA	RFC3	136464	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	36918283	36918673	36918579	Y	NA	CCDC169,CCDC169-SOHLH2,SOHLH2,SPG20	NA	NA	NA	NA	SPG20	23644	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	37881013	37881265	37881086	Y	POSTN	NA	LINC00547	IMR90	Hi-C	24141950	ALG5	308615	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	38244184	38244266	38244225	Y	NA	NA	NA	NA	NA	NA	ALG5	671786	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	41560539	41560879	41560717	Y	NA	NA	NA	NA	NA	NA	SUGT1P3	66629	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	42162855	42163294	42163201	Y	C13orf15,DGKH	NA	NA	NA	NA	NA	NAA16	279514	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	43378134	43378246	43378162	Y	NA	NA	NA	NA	NA	NA	EPSTI1	186161	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	43570775	43570983	43570833	Y	EPSTI1	EPSTI1,DNAJC15	EPSTI1,ENOX1	IMR90	Hi-C	24141950	EPSTI1	6368	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr13	43632661	43632965	43632672	Y	NA	DNAJC15	NA	NA	NA	NA	DNAJC15	37322	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr13	44329047	44329228	44329222	Y	NA	ENOX1	NA	NA	NA	NA	ENOX1	29816	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	44765408	44765809	44765737	Y	NA	NA	SERP2,TSC22D1,LINC00284	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CCDC122	313581	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	44880536	44881091	44880742	Y	C13orf31,CCDC122,C13orf31	NA	TSC22D1,LACC1,SERP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TSC22D1	268192	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	44884974	44885381	44885134	Y	CCDC122,TSC22D1	NA	TSC22D1,LACC1,SERP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TSC22D1	263902	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	44887042	44887399	44887172	Y	C13orf31,CCDC122,C13orf31	NA	TSC22D1,SERP2	IMR90	Hi-C	24141950	TSC22D1	261884	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	45492137	45492940	45492235	Y	TSC22D1	NA	NA	NA	NA	NA	NUFIP1	68678	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	45745052	45745233	45745142	Y	NA	NA	NA	NA	NA	NA	GTF2F2	52402	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	48464437	48464519	48464469	Y	NA	NA	HTR2A	IMR90	Hi-C	24141950	NAP1L4P3	128842	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	48893198	48893248	48893225	Y	NA	LINC00441,RB1	NA	NA	NA	NA	RB1	17311	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	52303239	52303556	52303323	Y	WDFY2	NA	NA	NA	NA	NA	DHRS12	72737	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	52769647	52769861	52769811	Y	NA	NEK3	NA	NA	NA	NA	NEK3	37651	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr13	55208577	55208909	55208656	Y	NA	NA	NA	NA	NA	NA	SUGT1	1983733	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	72419778	72420070	72419973	Y	DACH1	DACH1	NA	NA	NA	NA	DACH1	19260	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	74708897	74709334	74709161	Y	KLF12	KLF12	NA	NA	NA	NA	KLF12	2503	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	76138851	76139260	76139031	Y	NA	COMMD6,UCHL3	NA	NA	NA	NA	UCHL3	17232	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	77898193	77898346	77898226	Y	NA	MYCBP2	NA	NA	NA	NA	MYCBP2	839	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	80122895	80122985	80122937	Y	NA	NA	NA	NA	NA	NA	NDFIP2	69608	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	96262046	96262201	96262124	Y	DZIP1	DZIP1	NA	NA	NA	NA	DZIP1	32756	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	96427402	96427645	96427445	Y	NA	NA	NA	NA	NA	NA	DNAJC3	100009	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	96498991	96499334	96499248	Y	NA	NA	NA	NA	NA	NA	DNAJC3	171598	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	97912286	97912462	97912389	Y	NA	MBNL2	NA	NA	NA	NA	MBNL2	40598	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	99123285	99123381	99123333	Y	NA	NA	NA	NA	NA	NA	STK24	104813	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	99128143	99128552	99128498	Y	STK24	NA	NA	NA	NA	NA	STK24	99642	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr13	99128638	99129073	99128919	Y	STK24	NA	NA	NA	NA	NA	STK24	99121	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr13	100314131	100314374	100314299	Y	NA	NA	NA	NA	NA	NA	CLYBL	57212	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	100523777	100524089	100523900	Y	NA	NA	NA	NA	NA	NA	ZIC5	98074	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	101075706	101076016	101075848	Y	NA	NA	NA	NA	NA	NA	TMTC4	249331	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	107070030	107070366	107070265	Y	NA	LINC00460	EFNB2	IMR90	Hi-C	24141950	LINC00460	43119	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	107173594	107173915	107173796	Y	NA	ARGLU1	NA	NA	NA	NA	ARGLU1	44597	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	107188808	107188962	107188940	Y	NA	ARGLU1	NA	NA	NA	NA	ARGLU1	29550	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	108520131	108520835	108520801	Y	LIG4,FAM155A	FAM155A	NA	NA	NA	NA	FAM155A	3048	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	108919755	108919960	108919910	Y	TNFSF13B,LIG4,ABHD13	NA	NA	NA	NA	NA	ABHD13	51028	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	109568044	109568430	109568179	Y	NA	NA	NA	NA	NA	NA	ABHD13	699317	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	110669788	110670084	110669997	Y	NA	NA	MYO16	IMR90	Hi-C	24141950	IRS2	232873	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	110932842	110933175	110933069	Y	NA	COL4A2,COL4A1	NA	NA	NA	NA	COL4A2	22984	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	111016537	111016818	111016564	Y	NA	NA	NA	NA	NA	NA	COL4A1	59041	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	111278486	111278706	111278495	Y	NA	CARKD	NA	NA	NA	NA	CARKD	12605	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	111526935	111527249	111527195	Y	RAB20	LINC00346,ANKRD10	NA	NA	NA	NA	LINC00346	6773	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	111881085	111881388	111881198	Y	NA	NA	NA	NA	NA	NA	ARHGEF7	116179	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	113588902	113588931	113588917	Y	NA	MCF2L-AS1	MCF2L,MCF2L-AS1,F10,F7,CUL4A	H1ESC,HELA,K562,IMR90	5C,Hi-C	22955621,24141950	MCF2L-AS1	32207	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	114147699	114148153	114147800	Y	F7,F10,PROZ,GRTP1	DCUN1D2,TMCO3	NA	NA	NA	NA	TMCO3	4389	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr13	114770181	114770639	114770503	Y	NA	NA	NA	NA	NA	NA	RASA3	125447	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	114809032	114809271	114809129	Y	NA	NA	NA	NA	NA	NA	RASA3	86815	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	114810103	114810577	114810313	Y	NA	NA	NA	NA	NA	NA	RASA3	85509	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr13	114830489	114831626	114831334	Y	RASA3	NA	NA	NA	NA	NA	RASA3	64460	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr13	114834440	114834743	114834634	Y	RASA3	NA	NA	NA	NA	NA	RASA3	61343	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr13	114881275	114881557	114881414	Y	NA	RASA3	NA	NA	NA	NA	RASA3	14529	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr13	114884280	114884926	114884814	Y	NA	RASA3	NA	NA	NA	NA	RASA3	11160	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	21150605	21151121	21150987	Y	TEP1,TMEM55B,PNP,ZNF219,ARHGEF40	RNASE4,ANG	NA	NA	NA	NA	ANG	269	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	21151333	21151694	21151411	Y	NA	RNASE4,ANG	NA	NA	NA	NA	ANG	997	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr14	21684818	21685080	21685024	Y	OR10G2,OR4E2,OR10G3,RNASE8,OR5AU1	NA	NA	NA	NA	NA	HNRNPC	50573	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	23358205	23358555	23358381	Y	NA	LRP10,RBM23,PRMT5,RP11-298I3.1	NA	NA	NA	NA	LRP10	19383	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	23449151	23449315	23449234	Y	MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB	HAUS4,AJUBA,C14orf93	NA	NA	NA	NA	AJUBA	536	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	23449757	23450231	23450060	Y	MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB,JUB	HAUS4,C14orf93	NA	NA	NA	NA	AJUBA	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	32477016	32477383	32477087	Y	NA	NA	NUBPL	IMR90	Hi-C	24141950	ARHGAP5	65937	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	32597823	32598061	32597946	Y	NUBPL	NA	NA	NA	NA	NA	ARHGAP5-AS1	53824	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	32953597	32954289	32954012	Y	ARHGAP5,AKAP6,NPAS3	NA	NA	NA	NA	NA	ARHGAP5-AS1	409598	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	35084533	35084797	35084665	Y	EAPP	SNX6	NA	NA	NA	NA	SNX6	12592	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	35628271	35628433	35628369	Y	NA	PPP2R3C,KIAA0391	NA	NA	NA	NA	KIAA0391	38516	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	35675118	35675537	35675232	Y	NFKBIA	NA	NA	NA	NA	NA	PSMA6	70302	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	36277376	36277519	36277444	Y	NFKBIA,RALGAPA1	RALGAPA1,NUTF2P2,BRMS1L	NA	NA	NA	NA	RALGAPA1	866	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	39559553	39559840	39559693	Y	NA	SEC23A,GEMIN2	NA	NA	NA	NA	SEC23A	17010	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	39958924	39958943	39958934	Y	NA	NA	NA	NA	NA	NA	FBXO33	59220	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	42075138	42075996	42075609	Y	LRFN5	NA	NA	NA	NA	NA	FBXO33	2175434	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	45505148	45505421	45505276	Y	NA	KLHL28,PRPF39	NA	NA	NA	NA	KLHL28	4104	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	49375724	49376075	49375898	Y	NA	NA	NA	NA	NA	NA	RPS29	687333	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	50328432	50328642	50328440	Y	METTL21D,ARF6,RPL36AL,DNAAF2	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	10511	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	50329576	50329987	50329651	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	11655	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr14	50334846	50335244	50334992	Y	RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6	NEMF,ARF6	SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	16925	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr14	50467375	50468846	50468075	Y	RPS29,RPL36AL,ARF6,L2HGDH,ATP5S,METTL21D	NA	NA	NA	NA	NA	ARF6	109565	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	50528497	50528810	50528555	Y	NA	NA	NA	NA	NA	NA	SOS2	167466	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	50799629	50799645	50799635	Y	NA	ATP5S,L2HGDH	NA	NA	NA	NA	L2HGDH	22363	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	50926261	50926342	50926322	Y	MAP4K5,ATL1,ATL1,CDKL1	CDKL1	NA	NA	NA	NA	CDKL1	45082	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	52119936	52120349	52120008	Y	FRMD6	NA	NA	NA	NA	NA	FRMD6	166118	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	52584121	52584359	52584179	Y	NA	NA	NID2,C14orf166	IMR90	Hi-C	24141950	NID2	50409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	52622606	52622722	52622664	Y	NA	NA	C14orf166,NID2,PTGDR	IMR90	Hi-C	24141950	NID2	88894	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	53385393	53385542	53385402	Y	DDHD1	FERMT2	NA	NA	NA	NA	FERMT2	31611	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	55116749	55117607	55117330	Y	NA	NA	NA	NA	NA	NA	SAMD4A	84934	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	55439267	55439511	55439438	Y	NA	NA	NA	NA	NA	NA	WDHD1	52312	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	55569733	55570176	55570087	Y	LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L	LGALS3	LGALS3,DLGAP5,MAPK1IP1L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	LGALS3	18652	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr14	55596570	55597156	55596587	Y	NA	LGALS3	NA	NA	NA	NA	LGALS3	7742	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	55921336	55921695	55921412	Y	NA	ATG14	NA	NA	NA	NA	ATG14	44760	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	61980898	61981080	61981008	Y	NA	NA	NA	NA	NA	NA	HIF1A	179151	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	63829601	63829975	63829789	Y	WDR89,PPP2R5E,KCNH5,GPHB5	NA	NA	NA	NA	NA	PPP2R5E	178117	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	64185455	64185764	64185678	Y	PPP2R5E,SYNE2,WDR89,WDR89,SGPP1	SGPP1	NA	NA	NA	NA	SGPP1	6993	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr14	64912318	64912487	64912430	Y	ESR2,ZBTB25,ZBTB1,AKAP5	AKAP5	NA	NA	NA	NA	AKAP5	17730	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	66126309	66126626	66126333	Y	NA	NA	NA	NA	NA	NA	FUT8	250999	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	66856568	66856818	66856763	Y	GPHN	NA	NA	NA	NA	NA	GPHN	115307	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	66912712	66912753	66912717	Y	NA	NA	NA	NA	NA	NA	GPHN	59372	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	67537409	67537555	67537482	Y	NA	NA	NA	NA	NA	NA	MPP5	168271	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	67774949	67775062	67775003	Y	PLEKHH1	EIF2S1,ATP6V1D	NA	NA	NA	NA	EIF2S1	49652	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	68161499	68161767	68161616	Y	PLEK2	VTI1B,RDH11	NA	NA	NA	NA	RDH11	968	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	68431145	68431760	68431180	Y	NA	NA	NA	NA	NA	NA	RAD51B	146649	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	68555905	68556402	68556038	Y	PIGH	NA	NA	NA	NA	NA	RAD51B	271409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	68943032	68943562	68943135	Y	NA	NA	NA	NA	NA	NA	ZFP36L1	317628	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	69417780	69418181	69417964	Y	NA	ACTN1	NA	NA	NA	NA	ACTN1	25976	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr14	69516483	69516670	69516577	Y	NA	NA	NA	NA	NA	NA	ACTN1	72326	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	69913588	69913836	69913761	Y	NA	NA	NA	NA	NA	NA	ERH	50244	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	70464665	70464959	70464731	Y	NA	NA	NA	NA	NA	NA	SMOC1	145817	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	73131912	73132517	73132075	Y	NA	NA	NA	NA	NA	NA	DPF3	226292	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr14	74220862	74221204	74221002	Y	NUMB,ZNF410,C14orf43,C14orf43	PNMA1,RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	30859	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	75033495	75033781	75033700	Y	NA	CTD-2207P18.2	NA	NA	NA	NA	CTD-2207P18.2	47569	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	75084188	75084360	75084254	Y	PGF,EIF2B2	CTD-2207P18.2	LTBP2,KIAA0317,FCF1,YLPM1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CTD-2207P18.2	2838	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	75086409	75086922	75086553	Y	PGF	CTD-2207P18.2	LTBP2,KIAA0317,FCF1,YLPM1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CTD-2207P18.2	5059	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	75087327	75087770	75087539	Y	PGF,EIF2B2,LTBP2	CTD-2207P18.2	YLPM1,NPC2,ISCA2,LTBP2,KIAA0317,FCF1	IMR90	Hi-C	24141950	CTD-2207P18.2	5977	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	75491919	75492089	75492033	Y	NA	EIF2B2,MLH3,ACYP1	NA	NA	NA	NA	MLH3	24146	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	76334268	76334588	76334390	Y	NA	IFT43	NA	NA	NA	NA	IFT43	31891	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr14	76513976	76514095	76514005	Y	NA	NA	NA	NA	NA	NA	IFT43	147497	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	77499482	77500543	77500476	Y	VASH1,C14orf166B,IRF2BPL	IRF2BPL	KIAA1737,POMT2,GSTZ1	MCF7	ChIA-PET	22265404	IRF2BPL	6448	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr14	77639599	77639692	77639653	Y	NA	ZDHHC22	C14orf166B,ZDHHC22,POMT2,GSTZ1,KIAA1737,TMEM63C,NGB,MIR1260A,TMED8	IMR90	Hi-C	24141950	ZDHHC22	32522	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	81685513	81686063	81685724	Y	GTF2A1,GTF2A1	DYNLL1P1	NA	NA	NA	NA	GTF2A1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	86073952	86074255	86074109	Y	NA	NA	NA	NA	NA	NA	GALC	2383754	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	90083771	90084428	90084236	Y	TDP1,FOXN3	FOXN3	NA	NA	NA	NA	FOXN3	278	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	90761350	90761506	90761428	Y	NA	PSMC1	NA	NA	NA	NA	PSMC1	40511	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	91102939	91103218	91103079	Y	NA	NA	NA	NA	NA	NA	TTC7B	177605	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	91406372	91406636	91406631	Y	NA	NA	NA	NA	NA	NA	CTD-3035D6.2	113900	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	91423143	91423331	91423289	Y	RPS6KA5,CCDC88C	NA	NA	NA	NA	NA	C14orf159	101346	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	91696123	91696361	91696283	Y	RPS6KA5,C14orf159,SMEK1,CCDC88C,GPR68,GPR68	GPR68	NA	NA	NA	NA	GPR68	21908	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	92070183	92070310	92070247	Y	NA	NA	NA	NA	NA	NA	SMEK1	95285	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	92970203	92970533	92970302	Y	ATXN3,SLC24A4,SLC24A4,RIN3	RIN3	NA	NA	NA	NA	RIN3	7585	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	93030823	93030949	93030917	Y	ATXN3,LGMN	NA	NA	NA	NA	NA	RIN3	52705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	93569992	93570233	93570210	Y	KIAA1409,C14orf109,C14orf109	ITPK1	NA	NA	NA	NA	ITPK1	10432	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	93697718	93697880	93697787	Y	ITPK1,MOAP1	MOAP1,RP11-371E8.4,UBR7,C14orf142	NA	NA	NA	NA	C14orf142	26279	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	95731733	95732288	95732036	Y	DICER1,CLMN	NA	NA	NA	NA	NA	CLMN	51955	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	96012218	96012367	96012292	Y	GLRX5	GLRX5,SCARNA13,SNHG10	NA	NA	NA	NA	SNHG10	13009	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr14	99439262	99439638	99439565	Y	NA	NA	NA	NA	NA	NA	SETD3	505578	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	99735950	99736476	99736276	Y	BCL11B	NA	NA	NA	NA	NA	SETD3	208740	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	100504494	100504745	100504607	Y	NA	NA	EVL,DEGS2,EML1	IMR90	Hi-C	24141950	YY1	197890	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	101151381	101151698	101151540	Y	RTL1,DLK1	DLK1	NA	NA	NA	NA	DLK1	38344	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	101159258	101159870	101159708	Y	NA	DLK1	NA	NA	NA	NA	DLK1	30172	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	102188292	102188876	102188640	Y	WDR20,PPP2R5C,PPP2R5C	RP11-1029J19.5,PPP2R5C	LINC00239	K562	ChIA-PET	22265404	RP11-1029J19.5	6569	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	102288392	102288845	102288491	Y	NA	NA	NA	NA	NA	NA	PPP2R5C	62257	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	102414226	102414964	102414565	Y	NA	DYNC1H1	NA	NA	NA	NA	DYNC1H1	13901	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr14	103266656	103267057	103266785	Y	NA	TRAF3	CDC42BPB,AMN	IMR90	Hi-C	24141950	TRAF3	24843	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	103557952	103558007	103557980	Y	NA	CDC42BPB,RP11-736N17.8,TNFAIP2	CDC42BPB,EXOC3L4,TNFAIP2,EIF5,LOC100131366,MARK3	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-736N17.8	1053	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	103929089	103929460	103929098	Y	NA	NA	NA	NA	NA	NA	CKB	57988	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	104228992	104229118	104229080	Y	NA	XRCC3,ZFYVE21	NA	NA	NA	NA	ZFYVE21	48925	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	105143455	105143754	105143546	Y	GPR132	RP11-982M15.6,INF2,ADSSL1	NA	NA	NA	NA	RP11-982M15.6	1729	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	105144100	105144955	105144117	Y	GPR132,AKT1	RP11-982M15.6,INF2,ADSSL1	NA	NA	NA	NA	RP11-982M15.6	528	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	105439556	105439771	105439692	Y	INF2,KIAA0284,C14orf79,AHNAK2	AHNAK2,C14orf79,CDCA4	PLD4	MCF7	ChIA-PET	22265404	AHNAK2	2923	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr14	105491233	105491512	105491453	Y	NA	AHNAK2,C14orf79,CDCA4	NA	NA	NA	NA	CDCA4	5748	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr14	105948139	105949025	105948432	Y	NA	CRIP2,CRIP1,C14orf80,TMEM121	NA	NA	NA	NA	CRIP1	2511	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr14	107252931	107253417	107253022	Y	NA	NA	NA	NA	NA	NA	TMEM121	1261991	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr15	21905791	21906130	21906013	Y	NA	NA	NA	NA	NA	NA	TUBGCP5	925265	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	25564293	25564526	25564383	Y	SNRPN,SNURF,SNRPN,UBE3A,UBE3A	NA	NA	NA	NA	NA	UBE3A	117602	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	25597069	25597306	25597188	Y	SNRPN,SNURF,SNRPN	NA	NA	NA	NA	NA	UBE3A	84822	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	25604152	25604594	25604190	Y	SNURF,SNRPN,UBE3A	NA	NA	NA	NA	NA	UBE3A	77534	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	25614491	25614606	25614563	Y	NA	NA	NA	NA	NA	NA	UBE3A	67522	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	25646289	25646668	25646556	Y	SNURF,SNRPN,UBE3A	UBE3A	NA	NA	NA	NA	UBE3A	35460	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	27300157	27300177	27300166	Y	NA	NA	NA	NA	NA	NA	GABRB3	117471	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	33124594	33124991	33124793	Y	NA	NA	NA	NA	NA	NA	GREM1	116419	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	33418806	33419006	33418854	Y	NA	NA	FMN1,SCG5,ARHGAP11A,GREM1	IMR90	Hi-C	24141950	FMN1	65891	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	36502579	36502898	36502738	Y	NA	NA	NA	NA	NA	NA	C15orf41	366914	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	36720333	36720777	36720654	Y	NA	NA	ATPBD4,LOC100507466	IMR90	Hi-C	24141950	C15orf41	149035	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	38751078	38751316	38751209	Y	NA	FAM98B	NA	NA	NA	NA	FAM98B	6750	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	39055505	39055677	39055593	Y	RASGRP1,C15orf53	NA	FSIP1,THBS1	IMR90	Hi-C	24141950	RASGRP1	199729	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	40373777	40374114	40374053	Y	FSIP1,BAHD1,BMF,BMF,BMF	SRP14,BMF	NA	NA	NA	NA	BMF	24979	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	40391032	40391342	40391133	Y	PLCB2,C15orf57,BMF,BMF,BMF	BMF	NA	NA	NA	NA	BMF	7751	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr15	42226071	42226526	42226165	Y	EHD4	EHD4	NA	NA	NA	NA	EHD4	36250	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	44838663	44839045	44838853	Y	NA	EIF3J-AS1,EIF3J	NA	NA	NA	NA	EIF3J	11408	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	45746745	45747578	45747238	Y	SPATA5L1,C15orf48,SQRDL,PLDN	C15orf48,RP11-519G16.3	NA	NA	NA	NA	RP11-519G16.3	8120	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	45748469	45749175	45748989	Y	SPATA5L1,C15orf48,SQRDL,PLDN	C15orf48,RP11-519G16.3	NA	NA	NA	NA	RP11-519G16.3	9844	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr15	48104672	48105061	48104769	Y	NA	NA	SEMA6D	IMR90	Hi-C	24141950	CTD-2270N23.1	83540	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	52349753	52350120	52349937	Y	NA	CTD-2184D3.5	NA	NA	NA	NA	CTD-2184D3.5	40600	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	52851602	52851989	52851853	Y	NA	MYO5A,ARPP19	NA	NA	NA	NA	ARPP19	8091	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	56332751	56332969	56332911	Y	NA	NEDD4	NEDD4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NEDD4	48807	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	57302684	57303020	57302852	Y	NA	NA	NA	NA	NA	NA	TCF12	93863	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	59158498	59158653	59158597	Y	ADAM10,RNF111,SLTM	RNF111	NA	NA	NA	NA	RNF111	3124	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	59576201	59576407	59576333	Y	GCNT3,MYO1E	NA	NA	NA	NA	NA	FAM81A	86485	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	61159819	61160079	61159949	Y	NA	NA	NA	NA	NA	NA	RORA	359439	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	61329284	61329972	61329593	Y	NA	NA	NA	NA	NA	NA	RORA	189546	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	61340586	61340641	61340614	Y	NA	NA	NA	NA	NA	NA	RORA	178877	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	61520020	61520614	61520340	Y	RORA	RORA	NA	NA	NA	NA	RORA	502	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	63041385	63041512	63041449	Y	NA	NA	NA	NA	NA	NA	RP11-244F12.1	201860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	63439577	63439949	63439764	Y	NA	LACTB,RPS27L,RAB8B	NA	NA	NA	NA	RPS27L	8271	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	63795379	63795825	63795543	Y	NA	USP3	NA	NA	NA	NA	USP3	586	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr15	64722485	64722825	64722650	Y	NA	KIAA0101,TRIP4,ZNF609	NA	NA	NA	NA	ZNF609	28116	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	64755596	64755800	64755698	Y	NA	ZNF609	NA	NA	NA	NA	ZNF609	4655	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	64960104	64960464	64960341	Y	NA	OAZ2	NA	NA	NA	NA	OAZ2	33016	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	65174333	65174776	65174649	Y	OAZ2,PLEKHO2,SPG21,SPG21	PLEKHO2,ANKDD1A	NA	NA	NA	NA	ANKDD1A	27325	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	65176143	65176677	65176391	Y	ZNF609,OAZ2,PLEKHO2,SPG21,SPG21	PLEKHO2,ANKDD1A	NA	NA	NA	NA	ANKDD1A	25424	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	65244919	65245418	65244949	Y	ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16,ANKDD1A	ANKDD1A,SPG21	NA	NA	NA	NA	SPG21	35230	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	65245420	65245827	65245459	Y	ZNF609,OAZ2,PLEKHO2,PARP16	ANKDD1A,SPG21	NA	NA	NA	NA	SPG21	34821	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	65951559	65951691	65951625	Y	NA	SLC24A1	NA	NA	NA	NA	SLC24A1	49855	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	66993287	66993569	66993487	Y	MAP2K1,SMAD6	SMAD6	NA	NA	NA	NA	SMAD6	721	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	67134448	67134928	67134631	Y	NA	NA	SMAD6,SNAPC5	IMR90	Hi-C	24141950	SMAD6	141882	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr15	67359902	67360303	67360058	Y	NA	SMAD3	NA	NA	NA	NA	SMAD3	5801	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr15	67399103	67399775	67399548	Y	SMAD3	SMAD3	NA	NA	NA	NA	SMAD3	45002	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	67426476	67426864	67426547	Y	SMAD3	NA	NA	NA	NA	NA	SMAD3	72375	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	67440675	67441024	67440815	Y	SMAD3	NA	NA	NA	NA	NA	SMAD3	86574	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	67442347	67443164	67443030	Y	SMAD3	NA	NA	NA	NA	NA	SMAD3	88246	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	67488498	67488886	67488594	Y	SMAD3	NA	NA	NA	NA	NA	IQCH	56252	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	67490281	67490446	67490307	Y	SMAD3	NA	NA	NA	NA	NA	IQCH	54692	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr15	67926783	67927143	67926830	Y	NA	NA	NA	NA	NA	NA	MAP2K5	93736	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	68878617	68878894	68878756	Y	CORO2B	CORO2B	NA	NA	NA	NA	CORO2B	9309	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	70391851	70392235	70392005	Y	TLE3	TLE3	NA	NA	NA	NA	TLE3	3336	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	70785060	70785587	70785260	Y	TLE3	NA	KIF23,LOC145837,TLE3,C15orf50,UACA	IMR90	Hi-C	24141950	UACA	268345	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	70800143	70800820	70800577	Y	NA	NA	KIF23,RPLP1,TLE3	IMR90	Hi-C	24141950	UACA	253112	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	71409431	71409745	71409525	Y	NA	NA	NA	NA	NA	NA	THAP10	226307	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	71571390	71571701	71571551	Y	NA	NA	NA	NA	NA	NA	THAP10	388266	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	71615809	71616164	71615988	Y	NA	NA	NA	NA	NA	NA	THAP10	432685	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	71677897	71678187	71678028	Y	NA	NA	NA	NA	NA	NA	THAP10	494773	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	72003894	72004173	72003980	Y	NA	NA	NA	NA	NA	NA	SENP8	400426	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr15	72897243	72897463	72897311	Y	SENP8,SENP8,MYO9A,TMEM202	NA	NA	NA	NA	NA	BBS4	79064	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	74249257	74249448	74249278	Y	NA	LOXL1,STOML1,PML	NA	NA	NA	NA	LOXL1	32927	CAGE	1C3IKEI	hg19	FANTOM5	6.12502472088487
chr15	74492868	74493054	74492979	Y	NA	STRA6	NA	NA	NA	NA	RP11-60L3.1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	74536866	74536980	74536923	Y	NA	RP11-60L3.1,STRA6	NA	NA	NA	NA	STRA6	34258	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	75018665	75019349	75018947	Y	SCAMP2,C15orf39,CYP1A1	EDC3,CYP1A1	NA	NA	NA	NA	CYP1A1	2714	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr15	75744907	75745094	75744993	Y	C15orf39,ODF3L1,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1089	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	75746315	75746749	75746512	Y	PPCDC,C15orf39,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	132	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	75747348	75747533	75747407	Y	RPP25,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1165	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	75939210	75939595	75939262	Y	NA	SNUPN,SNX33,IMP3	NA	NA	NA	NA	IMP3	163	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	75959061	75959441	75959310	Y	SNX33	SNUPN,SNX33,IMP3	NA	NA	NA	NA	IMP3	20014	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	76050803	76051078	76050853	Y	NA	DNM1P35	NA	NA	NA	NA	DNM1P35	21839	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	76658083	76658321	76658202	Y	NA	ISL2	NA	NA	NA	NA	ISL2	31018	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	78342105	78342280	78342151	Y	TBC1D2B	TBC1D2B	NA	NA	NA	NA	TBC1D2B	25786	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	78754081	78754185	78754133	Y	ACSBG1	IREB2	NA	NA	NA	NA	IREB2	26308	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	80816171	80816419	80816261	Y	ARNT2,KIAA1199	NA	NA	NA	NA	NA	ARNT2	121479	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	82202578	82202690	82202619	Y	NA	NA	MEX3B	IMR90	Hi-C	24141950	MEX3B	133792	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	83329401	83329783	83329629	Y	AP3B2,CPEB1,CPEB1	RP11-752G15.4,AP3B2	NA	NA	NA	NA	RP11-752G15.4	29327	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	83680959	83681167	83681099	Y	NA	HOMER2,FAM103A1,C15orf40	NA	NA	NA	NA	C15orf40	2566	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	83730539	83730760	83730650	Y	NA	BTBD1,TM6SF1	NA	NA	NA	NA	BTBD1	3346	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	83777211	83777631	83777545	Y	NA	BTBD1,TM6SF1	NA	NA	NA	NA	TM6SF1	3052	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr15	83857860	83858021	83857985	Y	NA	HDGFRP3	NA	NA	NA	NA	HDGFRP3	16749	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	85455479	85455863	85455740	Y	SLC28A1	NA	NA	NA	NA	NA	PDE8A	65808	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	85458286	85458507	85458420	Y	NA	NA	NA	NA	NA	NA	PDE8A	63164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	85645018	85645768	85645040	Y	NA	NA	NA	NA	NA	NA	PDE8A	123347	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	85662697	85662918	85662803	Y	PDE8A	NA	NA	NA	NA	NA	PDE8A	141026	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	85956762	85957097	85956878	Y	AKAP13,PDE8A	AKAP13	NA	NA	NA	NA	AKAP13	34960	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr15	86130202	86130404	86130208	Y	AKAP13,AKAP13	NA	NA	NA	NA	NA	KLHL25	205857	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	86233947	86234070	86233985	Y	NA	NA	NA	NA	NA	NA	KLHL25	102191	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	86285642	86285870	86285715	Y	NA	NA	NA	NA	NA	NA	KLHL25	50391	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	89664635	89664981	89664666	Y	NA	ABHD2	NA	NA	NA	NA	ABHD2	35945	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	90363996	90364798	90364610	Y	POLG,ZNF710,CIB1,ANPEP,AP3S2	ANPEP	NA	NA	NA	NA	ANPEP	7363	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	90365179	90365539	90365285	Y	POLG,ZNF710,SEMA4B,CIB1,ANPEP,AP3S2	ANPEP	NA	NA	NA	NA	ANPEP	8546	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	90547918	90548344	90548145	Y	NA	NA	NA	NA	NA	NA	C15orf38	93730	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	90754464	90755447	90755260	Y	SEMA4B,SEMA4B,CIB1	CIB1,TTLL13	NA	NA	NA	NA	CIB1	19832	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr15	90945502	90945781	90945680	Y	FES,FES,FES,ZNF710,CIB1,IQGAP1	IQGAP1	NA	NA	NA	NA	IQGAP1	16052	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	92400967	92401402	92401150	Y	SLCO3A1	SLCO3A1	NA	NA	NA	NA	SLCO3A1	6042	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	92409805	92409861	92409833	Y	NA	SLCO3A1	NA	NA	NA	NA	SLCO3A1	14880	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	92481402	92481730	92481524	Y	SLCO3A1	NA	NA	NA	NA	NA	SLCO3A1	86477	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	92509194	92509613	92509420	Y	NA	NA	NA	NA	NA	NA	SLCO3A1	114269	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	93363497	93364154	93363735	Y	ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2	FAM174B	ASB9P1,CHD2,LOC100507217	IMR90	Hi-C	24141950	FAM174B	12383	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	93520042	93520437	93520098	Y	CHD2	NA	NA	NA	NA	NA	MIR3175	74413	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	96884042	96884481	96884402	Y	NA	NR2F2,NR2F2-AS1	NA	NA	NA	NA	NR2F2-AS1	15452	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	99416036	99416369	99416103	Y	IGF1R	NA	NA	NA	NA	NA	SYNM	220051	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	99864304	99864757	99864539	Y	NA	NA	NA	NA	NA	NA	HSP90B2P	68467	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	100243855	100244145	100244036	Y	NA	LYSMD4	NA	NA	NA	NA	LYSMD4	27621	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	100651295	100651582	100651483	Y	NA	NA	NA	NA	NA	NA	ADAMTS17	228628	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	101499118	101499600	101499493	Y	LRRK1	LRRK1	NA	NA	NA	NA	LRRK1	41698	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr15	101834172	101834455	101834316	Y	TM2D3,TARSL2,SNRPA1	CHSY1,SNRPA1	NA	NA	NA	NA	SNRPA1	685	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr15	102202329	102202647	102202484	Y	OR4F15	TM2D3	NA	NA	NA	NA	TM2D3	11735	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr16	121563	121849	121614	Y	TMEM8A,PIGQ,PIGQ,NME4,MRPL28,ITFG3,DECR2,RHBDF1,MPG,MPG	SNRNP25,POLR3K,RHBDF1,MPG	NA	NA	NA	NA	RHBDF1	2505	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	575519	575832	575766	Y	NHLRC4	PIGQ,NHLRC4	NA	NA	NA	NA	PIGQ	39163	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	578748	579156	578911	Y	LUC7L	PIGQ,NHLRC4	NA	NA	NA	NA	PIGQ	35839	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr16	2057818	2059084	2058234	Y	TRAF7,ECI1,HN1L,EME2,ZNF598	RPS2,SNHG9,TBL3,GFER,SYNGR3,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	ZNF598	0	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr16	2209355	2209786	2209516	Y	NPW	RAB26,SNORD60,TRAF7,CASKIN1,MLST8	NA	NA	NA	NA	TRAF7	5656	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	2478608	2478672	2478640	Y	RPS2,RNF151,TBL3,GFER,NTHL1,TSC2,TRAF7,MLST8,MLST8,DNASE1L2,ECI1,TCEB2,FLYWCH2	CCNF,C16orf59,TBC1D24	NA	NA	NA	NA	CCNF	1213	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	2845811	2846048	2845884	Y	OR1F1,ZNF200,ZNF200,ZNF200,MEFV,ATP6V0C,ATP6V0C,PDPK1,SRRM2	SRRM2,TCEB2,PRSS21	NA	NA	NA	NA	PRSS21	19116	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	2885761	2886144	2885824	Y	NA	PRSS21,FLYWCH2	NA	NA	NA	NA	PRSS21	20597	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	2917931	2918273	2918246	Y	NA	FLYWCH2,FLYWCH1	PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	FLYWCH2	12914	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	3156518	3156937	3156694	Y	PAQR4,CLUAP1,ZNF205	IL32,ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	3624	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	3200393	3200919	3200597	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	22615	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	3202363	3202472	3202417	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	24585	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	3285972	3286117	3286070	Y	PRSS22,ZSCAN10,ZNF200,ZNF200,ZNF200,ZNF75A,ZNF263	ZNF200,ZNF263	NA	NA	NA	NA	ZNF200	1751	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	4233647	4234082	4234013	Y	NA	NA	NA	NA	NA	NA	TFAP4	86994	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr16	4321625	4322178	4321908	Y	ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4	TFAP4	NA	NA	NA	NA	TFAP4	549	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	4427155	4427449	4427262	Y	NA	PAM16,VASN,CORO7,DNAJA3	NA	NA	NA	NA	VASN	7306	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	4666118	4666710	4666381	Y	NA	MGRN1	NA	NA	NA	NA	MGRN1	1624	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	4818680	4818913	4818758	Y	C16orf5,C16orf5,SEC14L5,ROGDI	C16orf71,ANKS3,ZNF500,ROGDI	NA	NA	NA	NA	ZNF500	3055	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	4900331	4900638	4900507	Y	MGRN1,UBN1,UBN1	ROGDI,UBN1,GLYR1	NA	NA	NA	NA	GLYR1	4988	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr16	8159340	8159643	8159579	Y	NA	NA	NA	NA	NA	NA	METTL22	553897	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	11058771	11058999	11058871	Y	CIITA,SOCS1,CLEC16A	DEXI,CLEC16A	NA	NA	NA	NA	CLEC16A	22426	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	12008398	12008797	12008598	Y	NA	GSPT1	NA	NA	NA	NA	GSPT1	459	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	14379572	14379808	14379698	Y	NA	NA	NA	NA	NA	NA	MKL2	216394	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	15583408	15583655	15583541	Y	NDE1,C16orf45	NA	KIAA0430	IMR90	Hi-C	24141950	C16orf45	57256	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	15766632	15767024	15766843	Y	KIAA0430,NDE1,NDE1	KIAA0430,NDE1	NA	NA	NA	NA	NDE1	31508	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr16	19103583	19103758	19103655	Y	NA	COQ7,ITPRIPL2	NA	NA	NA	NA	ITPRIPL2	19496	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr16	19714468	19714843	19714656	Y	NA	IQCK	NA	NA	NA	NA	IQCK	10935	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	21295163	21295477	21295440	Y	NA	CRYM-AS1	NA	NA	NA	NA	CRYM-AS1	14693	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	22031141	22031181	22031161	Y	NA	C16orf52	VWA3A	IMR90	Hi-C	24141950	C16orf52	14182	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	22202596	22202946	22202679	Y	POLR3E,CDR2	EEF2K	UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	12657	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	23518606	23518950	23518778	Y	GGA2	GGA2,UBFD1,EARS2	NA	NA	NA	NA	GGA2	12366	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	27254406	27254878	27254778	Y	IL4R	NSMCE1	NA	NA	NA	NA	NSMCE1	23237	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	27533512	27533805	27533694	Y	JMJD5,JMJD5,IL21R,KIAA0556,GTF3C1	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	25429	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	27546889	27546978	27546937	Y	NA	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	12256	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	28108728	28108802	28108745	Y	APOBR,XPO6	NA	NA	NA	NA	NA	XPO6	112439	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	28871082	28871475	28871117	Y	NA	ATXN2L,TUFM,SH2B1	NA	NA	NA	NA	SH2B1	15161	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	30645556	30645885	30645776	Y	CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14	ZNF689,PRR14,FBRS	PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF689	12223	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr16	30885980	30886229	30886174	Y	ZNF689,PHKG2,RNF40,C16orf93,ZNF668	MIR4519,BCL7C,CTF1,FBXL19,FBXL19-AS1	NA	NA	NA	NA	MIR4519	1336	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	31223480	31223547	31223514	Y	ZNF629	FUS,PYCARD	NA	NA	NA	NA	PYCARD	10709	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	33509690	33509798	33509723	Y	NA	NA	NA	NA	NA	NA	ZNF267	1626611	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr16	34979653	34980053	34979874	Y	NA	NA	NA	NA	NA	NA	ZNF267	3096574	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	48417730	48418013	48418003	Y	N4BP1,SIAH1,SIAH1	NA	NA	NA	NA	NA	SIAH1	62300	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	50376082	50376389	50376371	Y	NA	BRD7	NA	NA	NA	NA	BRD7	24456	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	51670868	51671078	51670973	Y	NA	HNRNPA1P48	NA	NA	NA	NA	HNRNPA1P48	6589	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr16	56641054	56641530	56641359	Y	MT2A,MT1E	MT2A,MT1L,MT1E,MT1M,MT1A	NA	NA	NA	NA	MT2A	943	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	57680678	57681373	57680764	Y	NA	GPR56	NA	NA	NA	NA	GPR56	38114	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	57825562	57825816	57825638	Y	NA	NA	NA	NA	NA	NA	KATNB1	57920	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	57841964	57842337	57842236	Y	NA	NA	NA	NA	NA	NA	KIFC3	52620	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	57927623	57928192	57928041	Y	GPR97,ZNF319	KIFC3	NA	NA	NA	NA	KIFC3	32666	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	66508767	66508904	66508846	Y	NA	BEAN1	NA	NA	NA	NA	BEAN1	49567	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	66719308	66719396	66719350	Y	NA	CMTM4	NA	NA	NA	NA	CMTM4	9214	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	66906996	66907469	66907329	Y	SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2	NAE1,PDP2	NA	NA	NA	NA	NAE1	1837	CAGE	1C3IKEI	hg19	FANTOM5	5.20627101275214
chr16	67451571	67451866	67451736	Y	RRAD,CBFB,FHOD1,PLEKHG4,FAM65A	ZDHHC1	NA	NA	NA	NA	ZDHHC1	2835	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	68271348	68271876	68271591	Y	TSNAXIP1,SLC12A4,ESRP2	PLA2G15,SLC7A6	NA	NA	NA	NA	PLA2G15	5331	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr16	68320188	68320357	68320233	Y	RANBP10,THAP11,EDC4,PSMB10,DPEP2,NFATC3,ZFP90,SLC7A6,SLC7A6OS,PRMT7	PLA2G15,SLC7A6,SLC7A6OS,PRMT7,RNU4-30P	NA	NA	NA	NA	SLC7A6OS	22492	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	68433458	68433594	68433558	Y	NA	NA	NA	NA	NA	NA	RNU4-30P	72026	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	69432325	69432475	69432421	Y	TERF2	TERF2,CYB5B	NFAT5,MIR1538,VPS4A,COG8,TERF2,NOB1,CYB5B,NQO1,WWP2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	TERF2	7999	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	69477830	69478460	69477879	Y	NA	TERF2,CYB5B	NA	NA	NA	NA	CYB5B	21402	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	69751128	69751528	69751345	Y	PDF,TERF2,NQO1	NQO1,NOB1,WWP2	NA	NA	NA	NA	NQO1	7326	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	69790577	69791500	69790768	Y	PDF,NIP7,NOB1	NQO1,NOB1,WWP2	NA	NA	NA	NA	WWP2	2709	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	70461908	70462625	70462132	Y	ST3GAL2	ST3GAL2,FUK	NA	NA	NA	NA	ST3GAL2	8515	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	70464772	70465160	70465031	Y	ST3GAL2	ST3GAL2,FUK	NA	NA	NA	NA	ST3GAL2	5980	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	70470997	70471281	70471214	Y	NA	FUK	NA	NA	NA	NA	ST3GAL2	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	70771415	70771759	70771684	Y	EXOSC6	NA	NA	NA	NA	NA	MTSS1L	53446	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	71580921	71580983	71580949	Y	NA	ZNF19	NA	NA	NA	NA	ZNF19	16009	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	75278988	75279894	75279594	Y	CHST6,FA2H,BCAR1,BCAR1,BCAR1,BCAR1,BCAR1	BCAR1	NA	NA	NA	NA	BCAR1	20057	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	75411958	75412267	75412159	Y	NA	NA	NA	NA	NA	NA	CFDP1	53116	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	85028506	85028759	85028547	Y	COTL1,CRISPLD2,ZDHHC7,KIAA0513	ZDHHC7,KIAA0513	NA	NA	NA	NA	ZDHHC7	14382	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	85185210	85185759	85185517	Y	NA	NA	NA	NA	NA	NA	KIAA0513	125835	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	85202555	85203049	85202710	Y	NA	NA	NA	NA	NA	NA	KIAA0513	143180	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr16	85497347	85497685	85497518	Y	KIAA0182,GINS2	NA	KIAA0182,LOC727710,C16orf74,LINC00311,ZDHHC7,LOC400548	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	223994	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	85586938	85587370	85587020	Y	NA	NA	LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	134309	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	85604470	85605423	85604746	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	116256	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	85751381	85751721	85751674	Y	NA	GINS2,C16orf74	NA	NA	NA	NA	GINS2	29702	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	86609499	86609840	86609550	Y	FOXC2	MTHFSD,FOXC2,FOXL1	NA	NA	NA	NA	FOXL1	1525	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr16	86653031	86653193	86653112	Y	NA	FOXL1	FOXL1,FOXC2	IMR90	Hi-C	24141950	FOXL1	45057	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	86698129	86698417	86698281	Y	NA	NA	FOXL1,FLJ30679,MTHFSD,FOXC2,C16orf95,FBXO31	IMR90	Hi-C	24141950	FOXL1	90155	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	86698644	86698785	86698699	Y	FOXL1	NA	FOXL1,C16orf95,MTHFSD,FLJ30679,FOXC2	IMR90	Hi-C	24141950	FOXL1	90670	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	86775121	86775409	86775225	Y	NA	NA	FOXC2,FOXL1	IMR90	Hi-C	24141950	FOXL1	167147	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	86985410	86985767	86985608	Y	FOXC2,FOXL1	NA	FOXL1,FOXC2,MTHFSD,FLJ30679,C16orf95	IMR90	Hi-C	24141950	C16orf95	363255	CAGE	1C3IKEI	hg19	FANTOM5	9.80003955341578
chr16	87378207	87378359	87378234	Y	FBXO31	C16orf95,MAP1LC3B,FBXO31	NA	NA	NA	NA	C16orf95	29185	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	87498995	87499259	87499135	Y	BANP,BANP,MAP1LC3B,ZCCHC14	NA	NA	NA	NA	NA	FBXO31	75247	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	87812654	87813065	87812978	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	15056	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	87889826	87890140	87890011	Y	MAP1LC3B,ZCCHC14,BANP,BANP,BANP	SLC7A5	NA	NA	NA	NA	SLC7A5	10954	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	88365536	88366092	88365805	Y	ZNF469	NA	BANP	IMR90	Hi-C	24141950	ZFPM1	151633	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	88366840	88367234	88367013	Y	BANP,BANP,ZC3H18,CYBA	NA	BANP	IMR90	Hi-C	24141950	ZFPM1	150491	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	88835950	88836275	88836191	Y	NA	PIEZO1,CDT1,APRT	RNF166,CTU2	K562	ChIA-PET	22265404	PIEZO1	13344	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	88837093	88837695	88837443	Y	NA	PIEZO1,CDT1,APRT	NA	NA	NA	NA	PIEZO1	11924	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89268043	89268411	89268231	Y	NA	CDH15,ZNF778	NA	NA	NA	NA	ZNF778	13707	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr16	89382240	89382290	89382256	Y	ZNF276,ZNF276,SPATA2L,ANKRD11,ZNF778	NA	NA	NA	NA	NA	ZNF778	100122	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89382399	89382987	89382651	Y	ZNF276,ZNF276,SPATA2L,C16orf7,ANKRD11	NA	NA	NA	NA	NA	ZNF778	100281	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89388621	89389157	89388908	Y	ZNF276,C16orf7	NA	NA	NA	NA	NA	ZNF778	106503	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89423849	89423969	89423923	Y	CBFA2T3,ZNF276,SPATA2L,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	131000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89451016	89451317	89451295	Y	CBFA2T3,ACSF3,ZNF778,ZNF276,ZNF276,TCF25,SPG7,SPATA2L,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	103652	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89488709	89489334	89489046	Y	ZNF276,TCF25,SPATA2L,C16orf7,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	65635	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89555521	89555997	89555713	Y	ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,C16orf7,ANKRD11	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	196	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	89573610	89573931	89573734	Y	NA	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	18285	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr16	90087429	90087721	90087595	Y	TUBB3,DBNDD1,PRDM7	GAS8,DBNDD1	NA	NA	NA	NA	DBNDD1	2893	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr16	90143699	90144065	90143926	Y	C16orf55,SPATA2L,ZNF276,C16orf7,ZNF276,TCF25	NA	LOC100130015,GAS8	MCF7	ChIA-PET	22265404	DBNDD1	59163	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	576455	576740	576580	Y	NA	RPS4XP17,VPS53	NA	NA	NA	NA	RPS4XP17	17668	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	1014015	1014933	1014151	Y	PITPNA,CRK,ABR	NA	NA	NA	NA	NA	ABR	115382	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	1391218	1391783	1391434	Y	NA	CRK,MYO1C,INPP5K,PITPNA-AS1	NA	NA	NA	NA	MYO1C	2323	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	1953067	1954207	1953327	Y	TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1	RTN4RL1,DPH1,OVCA2,HIC1	NA	NA	NA	NA	HIC1	1241	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	2300026	2300553	2300288	Y	RAP1GAP2,PAFAH1B1,MNT	MNT	NA	NA	NA	NA	MNT	1859	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	2302778	2303366	2303033	Y	SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT	MNT	NA	NA	NA	NA	MNT	366	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	2863545	2863659	2863602	Y	OR3A2,OR1G1	NA	NA	NA	NA	NA	PAFAH1B1	369041	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	4205148	4205753	4205440	Y	P2RX1,ATP2A3,ZZEF1,ZMYND15,ZMYND15,SMTNL2,SMTNL2,ARRB2,UBE2G1	ANKFY1	NA	NA	NA	NA	ANKFY1	39874	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	5430157	5430402	5430333	Y	NLRP1	MIS12,DERL2	NA	NA	NA	NA	DERL2	42026	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	6655808	6656203	6655969	Y	RNASEK,GABARAP,XAF1	XAF1	XAF1,MIR4520A,ALOX15P1,MIR4520B,MED31,C17orf100,FBXO39,TEKT1	IMR90	Hi-C	24141950	XAF1	563	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	7737438	7738736	7737971	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	20328	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	7738822	7740614	7739046	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	18450	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr17	7745337	7745870	7745591	Y	NA	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	13194	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr17	7745915	7746944	7746139	Y	NA	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	12120	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr17	7746991	7747556	7747325	Y	POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	11508	CAGE	1C3IKEI	hg19	FANTOM5	6.73752719297335
chr17	7790181	7790340	7790322	Y	POLR2A,WRAP53,PER1,CTC1,KDM6B,CHD3,CHD3	CYB5D1,CHD3,LSMD1,AC025335.1,CNTROB,TRAPPC1	NA	NA	NA	NA	LSMD1	3625	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	8029634	8030116	8029995	Y	NA	HES7,PER1,VAMP2,SNORD118,TMEM107	NA	NA	NA	NA	HES7	4224	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr17	8057335	8058055	8057702	Y	KDM6B,NDEL1,CTC1,PER1,VAMP2,C17orf59	HES7,VAMP2,SNORD118,TMEM107,C17orf59	NA	NA	NA	NA	PER1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	8090795	8091158	8090849	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	406	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	8095551	8095762	8095658	Y	KDM6B,KCNAB3,CTC1,VAMP2	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	3987	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	8532647	8532776	8532657	Y	KRBA2	MYH10	NA	NA	NA	NA	MYH10	568	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	8843294	8843654	8843356	Y	NA	NA	NA	NA	NA	NA	NTN1	79205	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	15849102	15849709	15849209	Y	ZSWIM7,TTC19,ADORA2B	ADORA2B	NA	NA	NA	NA	ADORA2B	2871	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	15959345	15959465	15959410	Y	FAM18B2,ZNF286A,NCOR1,PIGL,NCOR1,C17orf76,TTC19,ZSWIM7	NA	NA	NA	NA	NA	ZSWIM7	58314	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	16189250	16189597	16189494	Y	NCOR1,TRPV2	NA	NA	NA	NA	NA	CENPV	65373	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	16300155	16300296	16300226	Y	NA	CENPV,UBB,TRPV2	NA	NA	NA	NA	TRPV2	16560	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	16355497	16355695	16355534	Y	TTC19,PIGL	TRPV2,FAM211A	NA	NA	NA	NA	FAM211A	37772	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	16438910	16439232	16439111	Y	NA	FAM211A,ZNF287	NA	NA	NA	NA	ZNF287	31288	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr17	17484274	17484547	17484424	Y	NA	PEMT	NA	NA	NA	NA	PEMT	8475	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr17	17743258	17743857	17743527	Y	SMCR8	SREBF1	NA	NA	NA	NA	SREBF1	4933	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	17817256	17817562	17817444	Y	SREBF1	NA	NA	NA	NA	NA	TOM1L2	56174	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	19141562	19141875	19141665	Y	RNF112,EPN2	NA	NA	NA	NA	NA	SNORD3D	127613	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	19147768	19147949	19147793	Y	PRPSAP2,RNF112	NA	NA	NA	NA	NA	MAPK7	131085	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	19967569	19967807	19967644	Y	NA	NA	NA	NA	NA	NA	SPECC1	56912	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	21179100	21179414	21179208	Y	CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3	C17orf103,MAP2K3	MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAP2K3	6570	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	21189600	21190105	21189864	Y	MAP2K3,MAP2K3	C17orf103,MAP2K3	NA	NA	NA	NA	MAP2K3	3616	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	21314266	21314623	21314560	Y	NA	NA	NA	NA	NA	NA	MAP2K3	128282	CAGE	1C3IKEI	hg19	FANTOM5	15.3125618022122
chr17	25409900	25410125	25410078	Y	NA	NA	NA	NA	NA	NA	WSB1	208977	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	25416172	25416581	25416426	Y	NA	NA	NA	NA	NA	NA	WSB1	202521	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	25680632	25681097	25680982	Y	NA	NA	KSR1,WSB1,MIR4522	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WSB1	61530	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	27100910	27101180	27101019	Y	NA	TLCD1,TRAF4	NA	NA	NA	NA	TRAF4	31908	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	27429797	27430178	27430111	Y	NA	NA	NA	NA	NA	NA	MYO18A	75252	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	27506307	27506816	27506504	Y	TLCD1,TLCD1,TRAF4,GIT1,MYO18A	MYO18A	NA	NA	NA	NA	MYO18A	877	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	27966112	27966641	27966332	Y	NA	GIT1,CORO6	NA	NA	NA	NA	CORO6	18187	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	29115484	29115559	29115508	Y	NA	CRLF3,CTD-2349P21.1,ATAD5	NA	NA	NA	NA	CRLF3	34235	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	29876692	29877391	29877039	Y	NA	NA	NA	NA	NA	NA	EVI2A	229790	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	30335785	30336145	30335965	Y	NA	NA	NA	NA	NA	NA	SUZ12	73748	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	30778136	30778420	30778202	Y	ZNF207	PSMD11,CDK5R1	NA	NA	NA	NA	PSMD11	8857	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	32049616	32049940	32049779	Y	NA	NA	NA	NA	NA	NA	CCL2	530364	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	33572314	33572864	33572356	Y	NA	SLFN5	NA	NA	NA	NA	SLFN5	4259	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	35292129	35292558	35292512	Y	ACACA,LHX1,AATF	RP11-445F12.1,AATF	NA	NA	NA	NA	RP11-445F12.1	169	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	35492690	35492856	35492817	Y	NA	NA	NA	NA	NA	NA	AATF	188515	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	36585417	36585600	36585486	Y	ARHGAP23	ARHGAP23	NA	NA	NA	NA	ARHGAP23	2755	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	37558786	37559227	37559071	Y	NA	FBXL20,MED1	NA	NA	NA	NA	FBXL20	2010	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	38226807	38227182	38226872	Y	NA	THRA,MED24,NR1D1,MSL1	NA	NA	NA	NA	MED24	11339	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	38603509	38603888	38603710	Y	IGFBP4	TOP2A,IGFBP4	NA	NA	NA	NA	IGFBP4	5807	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	38655848	38656036	38655907	Y	GJD3,IGFBP4,TNS4	NA	NA	NA	NA	NA	TNS4	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	38674878	38675250	38674921	Y	TMEM99,TMEM99,TMEM99,CDC6,TOP2A,TNS4	TNS4	IGFBP4,KRT42P,CCR7,RARA,GJD3,TOP2A,TNS4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNS4	19029	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	39949116	39949497	39949168	Y	KRT14,JUP	JUP,LEPREL4,FKBP10	NA	NA	NA	NA	JUP	7933	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	41162878	41163074	41162972	Y	TUBG1,CNTD1,NBR1,NBR1,ETV4	AARSD1,RUNDC1,RPL27,IFI35,VAT1	NA	NA	NA	NA	IFI35	6136	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	41173099	41173334	41173293	Y	NAGLU,VAT1	RUNDC1,RPL27,IFI35,VAT1	NA	NA	NA	NA	VAT1	1806	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	41409196	41409569	41409556	Y	TMEM106A	NA	IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARL4D	64758	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	41827198	41827473	41827372	Y	NA	DUSP3	NA	NA	NA	NA	DUSP3	26883	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	42173050	42173151	42173101	Y	TMEM101,G6PC3	LSM12,G6PC3,HDAC5,C17orf53	NA	NA	NA	NA	HDAC5	25919	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	42173326	42173627	42173470	Y	NA	LSM12,G6PC3,HDAC5,C17orf53	NA	NA	NA	NA	HDAC5	25443	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	42276572	42276897	42276785	Y	TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3	TMUB2,ATXN7L3,UBTF	NA	NA	NA	NA	ATXN7L3	1091	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr17	42634020	42634172	42634095	Y	TMUB2,TMUB2,GRN,FZD2	FZD2	NA	NA	NA	NA	FZD2	1095	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	42797981	42798248	42798116	Y	CCDC43	CCDC43,DBF4B,RP11-1072C15.1,ADAM11	NA	NA	NA	NA	RP11-1072C15.1	2016	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr17	43302645	43302970	43302880	Y	NA	FMNL1	NA	NA	NA	NA	FMNL1	5834	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	43305165	43306978	43306453	Y	PLEKHM1,ARHGAP27,FMNL1	FMNL1	NA	NA	NA	NA	FMNL1	8354	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr17	43398309	43398621	43398414	Y	NA	MAP3K14	LOC100133991,FMNL1,MAP3K14,TEX34,ARHGAP27	IMR90	Hi-C	24141950	MAP3K14	5895	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	44113965	44114105	44114069	Y	KIAA1267,KIAA1267	NA	NA	NA	NA	NA	MAPT	144217	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	44344171	44344471	44344293	Y	NA	NA	KANSL1-AS1,KANSL1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MAPT	374423	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	44847625	44847956	44847902	Y	WNT3	NA	NA	NA	NA	NA	RPS7P11	50092	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	44848812	44849347	44849259	Y	NA	NA	NA	NA	NA	NA	RPS7P11	51279	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	45515544	45515843	45515768	Y	NA	NA	NA	NA	NA	NA	NPEPPS	82465	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	45609469	45609601	45609554	Y	NA	NPEPPS	NA	NA	NA	NA	NPEPPS	11161	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	45725037	45725352	45725118	Y	SP2	KPNB1	NA	NA	NA	NA	KPNB1	195	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	45814083	45814467	45814294	Y	NA	TBX21	OSBPL7,MRPL10,SCRN2,LRRC46	IMR90	Hi-C	24141950	TBX21	5473	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	45983662	45984115	45983847	Y	CDK5RAP3	SP2,AC003665.1,PNPO	PNPO	IMR90	Hi-C	24141950	SP2	12146	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	46217226	46217562	46217317	Y	CDK5RAP3,SKAP1	CBX1,SNX11	NA	NA	NA	NA	SNX11	38507	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	46662684	46663231	46662943	Y	HOXB2,HOXB3,HOXB4,HOXB9,HOXB8,HOXB7,HOXB6,HOXB5	HOXB6,HOXB8,HOXB9,HOXB7	NA	NA	NA	NA	HOXB6	17123	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	46702579	46702749	46702606	Y	HOXB2,HOXB3,SNF8,HOXB5,HOXB6,HOXB7,HOXB8,HOXB9	HOXB6,HOXB8,HOXB9,HOXB7	NA	NA	NA	NA	HOXB9	740	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	47270202	47270509	47270359	Y	CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3	NA	NA	NA	NA	NA	ZNF652	167326	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	48139711	48140314	48140012	Y	XYLT2,LRRC59,EPN3,ITGA3	ITGA3,PDK2	NA	NA	NA	NA	ITGA3	8379	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr17	48255388	48256117	48255676	Y	NA	PPP1R9B	NA	NA	NA	NA	PPP1R9B	29397	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	48367346	48367814	48367643	Y	PPP1R9B	NA	NA	NA	NA	NA	XYLT2	53639	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr17	48716257	48716537	48716480	Y	NA	ABCC3	NA	NA	NA	NA	ABCC3	6119	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr17	53017345	53017570	53017451	Y	TOM1L1	TOM1L1,STXBP4,COX11	NA	NA	NA	NA	STXBP4	26518	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	53497797	53498268	53498065	Y	NA	MMD	NA	NA	NA	NA	MMD	444	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	54669912	54670125	54669969	Y	NA	NOG	NA	NA	NA	NA	NOG	852	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	54987224	54987877	54987630	Y	SCPEP1,TRIM25	TRIM25,COIL	NA	NA	NA	NA	TRIM25	1522	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	54993018	54993544	54993286	Y	SCPEP1,TRIM25	TRIM25,COIL	DGKE	MCF7	ChIA-PET	22265404	TRIM25	3619	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	55523126	55523573	55523446	Y	NA	NA	NA	NA	NA	NA	MSI2	191914	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	56012688	56013140	56012704	Y	NA	CUEDC1	VEZF1,SRSF1,CUEDC1	IMR90	Hi-C	24141950	CUEDC1	17544	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	56013342	56013699	56013370	Y	NA	CUEDC1,VEZF1	VEZF1,CUEDC1,SRSF1	IMR90	Hi-C	24141950	CUEDC1	16985	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	56161643	56161969	56161895	Y	VEZF1,MTMR4	DYNLL2	NA	NA	NA	NA	DYNLL2	2867	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	56419503	56419633	56419507	Y	OR4D2	SUPT4H1	NA	NA	NA	NA	SUPT4H1	8821	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	57409690	57409997	57409875	Y	YPEL2	YPEL2	NA	NA	NA	NA	YPEL2	2640	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	57841314	57841767	57841379	Y	NA	NA	NA	NA	NA	NA	PTRH2	58327	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	57853705	57854627	57854148	Y	NA	NA	NA	NA	NA	NA	MIR21	62000	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	57905350	57905555	57905420	Y	NA	MIR21	NA	NA	NA	NA	MIR21	11072	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	57925185	57925429	57925290	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	8558	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	57930626	57931026	57930760	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	13999	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	57962596	57962816	57962625	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	TUBD1	5488	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	58212242	58212405	58212344	Y	NA	NA	C17orf64,HEATR6,LOC645638,USP32,APPBP2,LOC653653	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HEATR6	57950	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	60729712	60730300	60729931	Y	NA	MRC2	NA	NA	NA	NA	MRC2	26950	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	60745829	60746119	60745974	Y	TLK2	MRC2	NA	NA	NA	NA	MRC2	43067	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	60868052	60868313	60868162	Y	NA	NA	NA	NA	NA	NA	MRC2	165290	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	61370802	61371122	61370929	Y	MAP3K3,LIMD2	NA	MIR548W	IMR90	Hi-C	24141950	CYB561	150617	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	62159440	62159790	62159613	Y	MAP3K3,LIMD2,ICAM2,PECAM1,DDX5,CEP95,ERN1	ERN1	NA	NA	NA	NA	ERN1	46389	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	62526246	62526643	62526459	Y	NA	POLG2,CEP95,DDX5	NA	NA	NA	NA	DDX5	23929	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	62773066	62773435	62773116	Y	NA	NA	NA	NA	NA	NA	PLEKHM1P	57837	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	62981858	62982486	62982198	Y	DDX5,CEP95,GNA13	AMZ2P1	AMZ2P1,GNA13	K562,MCF7	ChIA-PET	22265404	AMZ2P1	12164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	63639930	63640399	63640359	Y	NA	NA	NA	NA	NA	NA	CEP112	545803	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	64194072	64194322	64194164	Y	NA	CEP112	NA	NA	NA	NA	CEP112	7870	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	64544411	64544774	64544437	Y	NA	NA	NA	NA	NA	NA	PRKCA	247657	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	65389377	65389540	65389482	Y	HELZ,BPTF,PITPNC1	PSMD12,PITPNC1	NA	NA	NA	NA	PITPNC1	17802	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66016045	66016315	66016119	Y	NA	C17orf58,KPNA2	BPTF,C17orf58,KPNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KPNA2	13320	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66041204	66041633	66041268	Y	NA	KPNA2	NA	NA	NA	NA	KPNA2	11569	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66374808	66375131	66375016	Y	SLC16A6	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	76523	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66376984	66377775	66377396	Y	NA	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	73879	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66379549	66379922	66379702	Y	SLC16A6,WIPI1	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	71732	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66434083	66434422	66434387	Y	NA	WIPI1	NA	NA	NA	NA	WIPI1	17232	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	66694330	66694724	66694542	Y	NA	NA	NA	NA	NA	NA	PRKAR1A	188409	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	66818173	66818316	66818245	Y	NA	NA	ABCA8	IMR90	Hi-C	24141950	PRKAR1A	312252	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	70398105	70398184	70398145	Y	NA	NA	NA	NA	NA	NA	RPL32P33	223186	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	70403681	70403886	70403813	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	217484	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	70417215	70417683	70417549	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	203687	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	70680022	70680249	70680147	Y	NA	LINC00511	NA	NA	NA	NA	LINC00511	45411	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	70706379	70706638	70706553	Y	NA	NA	NA	NA	NA	NA	LINC00511	71768	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	71227425	71227646	71227536	Y	NA	COG1,C17orf80,FAM104A	NA	NA	NA	NA	C17orf80	1053	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	72565404	72566131	72565833	Y	TTYH2,TTYH2,CD300A,TMEM104,CD300LF,CD300E,CD300LB,CD300C,CD300LD	NA	NA	NA	NA	NA	RAB37	98586	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	72734256	72734824	72734605	Y	DNAI2,CD300A,CD300LB,SLC9A3R1,CD300LF,RAB37,RAB37	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	SLC9A3R1	7967	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	72745955	72746124	72746086	Y	NA	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	SLC9A3R1	3164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	72978355	72978661	72978434	Y	KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L	CDR2L,ICT1,KCTD2	CDR2L,ICT1,C17orf28,HN1	MCF7,K562	ChIA-PET	22265404	CDR2L	3066	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	73087456	73087829	73087515	Y	NA	ATP5H,SLC16A5,ARMC7,NT5C	NA	NA	NA	NA	SLC16A5	5634	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	73120387	73120767	73120528	Y	GRB2,GRB2,CD300LF,HN1,HN1,SLC16A5,NT5C	SLC16A5,ARMC7,NT5C,HN1	NA	NA	NA	NA	NT5C	5123	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	73333353	73333637	73333600	Y	H3F3B,GRB2,GRB2,GGA3	SLC25A19	NA	NA	NA	NA	SLC25A19	49762	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	73689850	73690283	73690148	Y	KIAA0195,CASKIN2,WBP2	SAP30BP,RECQL5,ITGB4	NA	NA	NA	NA	ITGB4	25125	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	73718198	73718514	73718306	Y	NA	ITGB4,GALK1	NA	NA	NA	NA	ITGB4	2790	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr17	73719261	73719909	73719549	Y	MRPS7,LLGL2,LOC100130933,EVPL,ITGB4,ITGB4	ITGB4,GALK1	NA	NA	NA	NA	ITGB4	3853	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr17	73992927	73993207	73992957	Y	NA	TEN1,ACOX1,CDK3,EVPL	NA	NA	NA	NA	CDK3	1780	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	74341579	74341976	74341749	Y	NA	SPHK1,PRPSAP1	NA	NA	NA	NA	SPHK1	28689	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr17	75120383	75120864	75120582	Y	JMJD6,SEC14L1,SEC14L1,SEPT9,SEPT9,SEC14L1,SEC14L1	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	39585	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	75278845	75279720	75279369	Y	NA	NA	NA	NA	NA	NA	LINC00338,SEC14L1	198047	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	75281811	75282557	75281917	Y	SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	201013	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr17	75282703	75283463	75282995	Y	SEPT9,SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	201905	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	75284936	75285118	75285041	Y	NA	NA	NA	NA	NA	NA	LINC00338,SEC14L1	204138	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	75319028	75319523	75319372	Y	SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	238230	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	75319670	75320031	75319742	Y	MGAT5B,SEPT9,SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	238872	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	75321712	75322201	75321955	Y	SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	240914	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	75387909	75388384	75388205	Y	SEPT9,SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	307111	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	75421302	75421687	75421325	Y	SEPT9,SEPT9,SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	340504	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	75422359	75422648	75422577	Y	SEPT9,SEPT9,SEPT9,SEPT9	NA	NA	NA	NA	NA	LINC00338,SEC14L1	341561	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	75954393	75954796	75954614	Y	NA	NA	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TMC8	170055	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr17	76125814	76126042	76125869	Y	TNRC6C,PGS1,TMC6,TMC8,TMC6	TMC8,TMC6,SYNGR2	NA	NA	NA	NA	TMC6	446	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	76291015	76291144	76291081	Y	NA	NA	DNAH17,CYTH1,PGS1,SOCS3	IMR90	Hi-C	24141950	SOCS3	63014	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr17	76337607	76338208	76338068	Y	USP36,CYTH1,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	15950	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	76338337	76338836	76338651	Y	USP36,CYTH1,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	15322	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	76529146	76529333	76529216	Y	USP36,CYTH1,SOCS3,PGS1	RN7SL454P	NA	NA	NA	NA	RN7SL454P	2009	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	76588219	76588768	76588537	Y	NA	NA	DNAH17,CYTH1,USP36	IMR90	Hi-C	24141950	RN7SL454P	61082	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	76669540	76669658	76669599	Y	NA	NA	NA	NA	NA	NA	CYTH1	106721	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	77025234	77025427	77025328	Y	NA	CANT1,C1QTNF1,ENGASE	NA	NA	NA	NA	C1QTNF1	8338	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	77803693	77803802	77803748	Y	NA	CBX8,CBX4	NA	NA	NA	NA	CBX4	7426	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	77961931	77962339	77962251	Y	NA	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	45308	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	77967532	77967765	77967641	Y	CBX8,CBX4,RNF213,GAA,EIF4A3	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	39882	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr17	78228476	78228940	78228764	Y	GAA,EIF4A3,SGSH,RNF213	SLC26A11,SGSH,RNF213	NA	NA	NA	NA	RNF213	3725	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	78428203	78429274	78428566	Y	NA	ENDOV,NPTX1	NA	NA	NA	NA	NPTX1	20369	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	78800697	78801105	78800867	Y	NA	NA	NA	NA	NA	NA	CHMP6	162293	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	78806684	78807307	78807121	Y	C17orf56	NA	NA	NA	NA	NA	CHMP6	156091	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	79316253	79317268	79317090	Y	NA	SLC38A10	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,C17orf56,C17orf89,LINC00482,MIR3186,C17orf70,FSCN2,NPLOC4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	48906	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	79319325	79319648	79319507	Y	FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	51978	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr17	79319812	79320225	79320116	Y	FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	52465	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	79369574	79370687	79370597	Y	NA	NA	NA	NA	NA	NA	SLC38A10	102227	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	79397073	79397461	79397298	Y	MAFG,MAFG,NPLOC4,HGS	NA	NA	NA	NA	NA	RP13-766D20.1	80628	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	79451287	79451558	79451462	Y	AATK,AZI1,BAHCC1	RP13-766D20.1,ACTG1	NA	NA	NA	NA	RP13-766D20.1	26531	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	80056613	80056910	80056718	Y	C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN	RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	2405	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr17	80216124	80216440	80216314	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	13167	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	80255299	80255755	80255478	Y	SIRT7,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,C17orf62,C17orf62,CSNK1D,SECTM1,CD7	CSNK1D,CD7	NA	NA	NA	NA	CD7	17723	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	80255798	80256475	80256187	Y	SIRT7,MAFG,MAFG,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,HEXDC,C17orf62,C17orf62,CSNK1D,SECTM1,CD7	CSNK1D,CD7	NA	NA	NA	NA	CD7	17003	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr17	80454894	80455238	80455175	Y	LRRC45,CCDC57,FN3KRP,NARF	C17orf62,NARF,FOXK2	NA	NA	NA	NA	FOXK2	20351	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr17	80712796	80713169	80712899	Y	ZNF750,TBCD	FN3KRP,FN3K,TBCD	NA	NA	NA	NA	TBCD	4856	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	235900	236290	236249	Y	NA	THOC1	NA	NA	NA	NA	THOC1	29760	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	394915	395311	395219	Y	NA	NA	NA	NA	NA	NA	COLEC12	103411	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	666183	666708	666437	Y	THOC1,YES1,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	9843	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr18	667633	668016	667981	Y	THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11293	CAGE	1C3IKEI	hg19	FANTOM5	4.28751730461941
chr18	679559	679568	679564	Y	NA	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	23219	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	813044	813594	813404	Y	YES1	YES1	NA	NA	NA	NA	YES1	2497	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	2031840	2031857	2031849	Y	NA	NA	NA	NA	NA	NA	METTL4	537651	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	2516331	2516615	2516492	Y	NA	NA	NA	NA	NA	NA	METTL4	52893	CAGE	1C3IKEI	hg19	FANTOM5	3.67501483253092
chr18	3015219	3015501	3015351	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,METTL4,EMILIN2	LPIN2	LPIN2	K562	ChIA-PET	22265404	LPIN2	3906	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	3623872	3624258	3624140	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	214266	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr18	3624841	3625119	3625035	Y	MYL12A,MYL12B,MYL12B,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	215235	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr18	5629750	5630120	5629929	Y	NA	NA	NA	NA	NA	NA	L3MBTL4	783116	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	8643425	8643722	8643508	Y	ANKRD12,ANKRD12,RAB12	RAB12	NA	NA	NA	NA	RAB12	35982	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	8801229	8801479	8801315	Y	CCDC165	NA	NA	NA	NA	NA	RAB12	193786	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	9604214	9604566	9604459	Y	NA	PPP4R1	NA	NA	NA	NA	PPP4R1	8672	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	9742137	9742641	9742378	Y	NA	RAB31	TXNDC2	IMR90	Hi-C	24141950	RAB31	35975	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	9914998	9915501	9915128	Y	PPP4R1,RAB31,VAPA	VAPA	NA	NA	NA	NA	VAPA	2999	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr18	11005597	11005922	11005792	Y	NA	NA	NA	NA	NA	NA	NAPG	481695	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	11859926	11860218	11860181	Y	CHMP1B	CHMP1B,MPPE1	NA	NA	NA	NA	CHMP1B	10531	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr18	11947272	11947721	11947412	Y	CHMP1B	MPPE1,IMPA2	IMPA2,GNAL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IMPA2	31303	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr18	12993260	12993605	12993433	Y	NA	SEH1L,CEP192	NA	NA	NA	NA	CEP192	3899	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	13217020	13217525	13217240	Y	NA	NA	NA	NA	NA	NA	CEP192	227659	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	20855209	20855599	20855401	Y	NA	NA	NA	NA	NA	NA	CABLES1	142681	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	21228672	21228807	21228737	Y	LAMA3,ANKRD29	ANKRD29,LAMA3	NA	NA	NA	NA	ANKRD29	12042	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	23657156	23657540	23657507	Y	NA	SS18	NA	NA	NA	NA	SS18	11641	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	23836366	23836416	23836389	Y	TAF4B	TAF4B	NA	NA	NA	NA	TAF4B	32466	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	26744101	26744374	26744185	Y	NA	NA	NA	NA	NA	NA	CDH2	988691	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr18	28786845	28787168	28787084	Y	DSC3,DSC2,DSG3,DSG2,DSG1,DSC1	NA	DSC2	MCF7	ChIA-PET	22265404	DSG2	288838	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	29092491	29092685	29092630	Y	DSC3,DSC2,DSG1,DSG2	DSG2	NA	NA	NA	NA	DSG2	16485	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	32906658	32906918	32906743	Y	NA	ZSCAN30,ZNF271,ZNF24,ZNF396	NA	NA	NA	NA	ZNF24	16528	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	33876540	33877026	33876703	Y	NA	FHOD3	NA	NA	NA	NA	FHOD3	863	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	34052267	34052344	34052306	Y	NA	NA	NA	NA	NA	NA	FHOD3	176590	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	45688048	45688324	45688110	Y	NA	NA	NA	NA	NA	NA	SMAD2	232533	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr18	46066779	46067121	46067052	Y	CTIF	CTIF	NA	NA	NA	NA	CTIF	3362	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	46449093	46449527	46449211	Y	SMAD7	NA	NA	NA	NA	NA	CTIF	385676	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	46478230	46479206	46479122	Y	SMAD7,SMAD7	NA	NA	NA	NA	NA	CTIF	414813	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	46579464	46579684	46579624	Y	DYM	NA	NA	NA	NA	NA	DYM	406033	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	51883843	51884006	51883925	Y	NA	NA	NA	NA	NA	NA	POLI	90069	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	55267032	55267261	55267214	Y	NEDD4L	FECH,NARS	NA	NA	NA	NA	FECH	15028	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	65027496	65027665	65027594	Y	NA	NA	NA	NA	NA	NA	DSEL	154552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	65434285	65434424	65434346	Y	NA	NA	NA	NA	NA	NA	DSEL	252068	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	67957012	67957306	67957264	Y	NA	SOCS6	NA	NA	NA	NA	SOCS6	2875	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	72782580	72783607	72783115	Y	ZNF407,ZADH2,TSHZ1	NA	NA	NA	NA	NA	ZADH2	135696	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	74775208	74775557	74775363	Y	MBP	NA	NA	NA	NA	NA	ZNF236	242645	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	77153646	77154504	77153944	Y	ATP9B,NFATC1,NFATC1	NA	NA	NA	NA	NA	NFATC1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr18	77245359	77245518	77245445	Y	NA	NA	NA	NA	NA	NA	NFATC1	91503	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	289700	289869	289784	Y	C2CD4C,C19orf21,PPAP2C,PPAP2C	PPAP2C	NA	NA	NA	NA	PPAP2C	307	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	573434	573573	573481	Y	ODF3L2,C19orf22,CDC34,BSG	CDC34,GZMM,BSG,HCN2	NA	NA	NA	NA	BSG	4137	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	752652	753043	752777	Y	PPAP2C,PPAP2C,FSTL3,C19orf21	PALM,PTBP1	NA	NA	NA	NA	PTBP1	42032	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	778993	779222	779048	Y	GPX4,BSG,CNN2	PTBP1,MIR3187	NA	NA	NA	NA	PTBP1	15853	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr19	782330	783005	782707	Y	NA	PTBP1,MIR3187	NA	NA	NA	NA	PTBP1	12070	CAGE	1C3IKEI	hg19	FANTOM5	6.43127595692911
chr19	863983	864016	863999	Y	NA	CFD,MED16,R3HDM4	NA	NA	NA	NA	CFD	6530	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	867005	867400	867203	Y	GPX4,GPX4,C19orf24,ATP5D,ODF3L2,C19orf20,BSG,POLRMT,CNN2,CFD	CFD,MED16,R3HDM4	NA	NA	NA	NA	CFD	9552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	1101850	1102062	1101942	Y	C19orf6,MIDN,HMHA1,SBNO2,SBNO2	HMHA1,POLR2E	NA	NA	NA	NA	GPX4	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	1133542	1133865	1133752	Y	C19orf22,ARID3A,C19orf6,ABCA7,MIDN,CIRBP,HMHA1,SBNO2,SBNO2	POLR2E,GPX4,SBNO2	NA	NA	NA	NA	GPX4	31606	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	1169743	1170349	1170015	Y	NA	SBNO2,STK11	NA	NA	NA	NA	SBNO2	1933	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr19	1266359	1266798	1266589	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	C19orf24	6228	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	1855247	1855761	1855485	Y	SPPL2B,SF3A2,PLEKHJ1,LSM7,C19orf35,NDUFS7,C19orf25,TCF3,ATP8B3,ATP8B3,MOBKL2A,BTBD2,REXO1,SCAMP4,KLF16,CSNK1G2,ADAT3	ATP8B3,REXO1,KLF16,SCAMP4,ADAT3	NA	NA	NA	NA	KLF16	5806	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	1942393	1942508	1942451	Y	OAZ1,DOT1L,C19orf35,MOBKL2A,MKNK2,REXO1,KLF16,CSNK1G2	SCAMP4,ADAT3,CSNK1G2	NA	NA	NA	NA	CSNK1G2	3205	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	2059605	2060167	2060113	Y	REXO1,FAM108A1,SCAMP4,ADAT3,BTBD2	BTBD2,MKNK2,MOB3A	NA	NA	NA	NA	MKNK2	10362	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	2540691	2541097	2540881	Y	TIMM13	NA	NA	NA	NA	NA	GADD45B	66571	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	3035530	3035851	3035686	Y	NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2	TLE2,AES	NA	NA	NA	NA	TLE2	9782	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	3387730	3388119	3388011	Y	NA	NFIC	NA	NA	NA	NA	NFIC	30169	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	3397236	3397600	3397594	Y	NA	NFIC	NA	NA	NA	NA	NFIC	39675	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	3428769	3429112	3428821	Y	TLE2,NFIC	NA	NA	NA	NA	NA	DOHH	69826	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	3552794	3553085	3553017	Y	GNA15,C19orf28	FZR1,HMG20B,MFSD12	NA	NA	NA	NA	HMG20B	17690	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	4052414	4052757	4052628	Y	CCDC94,ZBTB7A	PIAS4,ZBTB7A	NA	NA	NA	NA	ZBTB7A	12186	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	4057405	4058198	4058044	Y	CCDC94,ZBTB7A	ZBTB7A	NA	NA	NA	NA	ZBTB7A	6745	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	4061318	4061457	4061400	Y	SEMA6B,PLIN5,ZBTB7A	ZBTB7A	NA	NA	NA	NA	ZBTB7A	3486	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	4064475	4064868	4064603	Y	SEMA6B,CCDC94,ZBTB7A,SIRT6	ZBTB7A	NA	NA	NA	NA	ZBTB7A	75	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	4567148	4567365	4567215	Y	TICAM1,SEMA6B	LRG1	NA	NA	NA	NA	LRG1	28662	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	4567864	4568201	4568091	Y	CCDC94,TICAM1,KDM4B,SEMA6B	LRG1	NA	NA	NA	NA	LRG1	29378	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	5287522	5287818	5287647	Y	NA	RPL32P34	NA	NA	NA	NA	RPL32P34	11777	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	6076501	6076965	6076757	Y	NA	NA	NA	NA	NA	NA	RANBP3	100348	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	6108978	6109271	6109224	Y	NA	NA	NA	NA	NA	NA	RFX2	88312	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	7437354	7437833	7437574	Y	ZNF557,STXBP2,PNPLA6,PEX11G,LOC100131801,EVI5L,ARHGEF18	ARHGEF18	INSR,ARHGEF18,C19orf45,PEX11G,CLEC4G,CLEC4M,CD209,CLEC4GP1	IMR90	Hi-C	24141950	ARHGEF18	20166	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	8607140	8607451	8607227	Y	RAB11B,PRAM1,MYO1F	ZNF414	NA	NA	NA	NA	ZNF414	30092	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	8674150	8674979	8674636	Y	ADAMTS10	ADAMTS10	NA	NA	NA	NA	ADAMTS10	530	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	9757386	9757713	9757550	Y	NA	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	26063	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	9783821	9783976	9783959	Y	NA	ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	45	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	9896233	9896620	9896495	Y	ZNF266,COL5A3,ZNF846	FBXL12,UBL5,PIN1	NA	NA	NA	NA	FBXL12	39872	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	10925932	10926095	10926043	Y	ICAM3,TYK2,PDE4A,PDE4A,S1PR5,S1PR5,ATG4D,CDKN2D,CDKN2D,DNM2,C19orf38	TMED1	NA	NA	NA	NA	TMED1	18899	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	10949257	10949551	10949405	Y	CDC37,KEAP1,KRI1,ILF3,QTRT1,DNM2,SPC24,SMARCA4,SMARCA4	TMED1,CARM1	NA	NA	NA	NA	TMED1	4263	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	11202963	11203178	11203054	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	4925	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	11205696	11206011	11205901	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	7658	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	11253991	11254271	11254206	Y	PRKCSH,ECSIT,TMED1,CARM1,YIPF2,DOCK6	SPC24	NA	NA	NA	NA	SPC24	10213	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	11404382	11404791	11404593	Y	ACP5,ACP5,C19orf38,LPPR2,CCDC159	DOCK6,CCDC159	NA	NA	NA	NA	DOCK6	33225	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	11592904	11593323	11593025	Y	ZNF491,ZNF441,CCDC151,ELAVL3,ZNF653	PRKCSH,CTC-398G3.2,ECSIT	NA	NA	NA	NA	CTC-398G3.2	38928	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	11878639	11879058	11878901	Y	NA	ZNF823,ZNF441,ZNF491,ZNF440	NA	NA	NA	NA	ZNF441	2824	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	12888910	12889352	12889266	Y	NA	C19orf43,ASNA1,JUNB,RNASEH2A	NA	NA	NA	NA	JUNB	10958	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr19	12899457	12901460	12900777	Y	NA	RNASEH2A,MAST1	NA	NA	NA	NA	JUNB	0	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	13024998	13025376	13025029	Y	NA	HOOK2,DNASE2,GCDH,FARSA,CALR,RAD23A,GADD45GIP1	NA	NA	NA	NA	FARSA	17475	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	13095998	13096573	13096246	Y	ZNF490,ZNF791,TNPO2,TNPO2,MAST1	CALR,RAD23A,GADD45GIP1,NFIX	NA	NA	NA	NA	NFIX	7849	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	13262107	13262928	13262695	Y	MAN2B1,C19orf43,JUNB	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	2878	CAGE	1C3IKEI	hg19	FANTOM5	3.98126606857516
chr19	13266326	13267156	13266576	Y	MAN2B1,C19orf43,JUNB,DNASE2,LYL1,STX10	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	7097	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr19	13274586	13275096	13274696	Y	GADD45GIP1,NACC1	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	15357	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	13907523	13907866	13907763	Y	NA	MRI1,C19orf53,ZSWIM4	NA	NA	NA	NA	ZSWIM4	3249	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	14276845	14277176	14277145	Y	NA	PRKACA,ASF1B,LPHN1	NA	NA	NA	NA	ASF1B	31077	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	14545712	14545849	14545765	Y	NDUFB7,PKN1	DDX39A,PKN1	NA	NA	NA	NA	PKN1	3847	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	14545997	14546246	14546106	Y	NA	DDX39A,PKN1	NA	NA	NA	NA	PKN1	4132	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	14616908	14617174	14617017	Y	GIPC1	GIPC1,TECR,DNAJB1	GIPC1	MCF7	ChIA-PET	22265404	TECR	8723	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	14789611	14789897	14789753	Y	OR7A17,OR1I1,SLC1A6	ZNF333	NA	NA	NA	NA	ZNF333	8716	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	15321082	15321623	15321224	Y	RASAL3	NOTCH3	NA	NA	NA	NA	NOTCH3	11290	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	16449243	16449463	16449304	Y	RAB8A,KLF2	KLF2	NA	NA	NA	NA	KLF2	15615	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	16477143	16477842	16477298	Y	MED26,KLF2	KLF2	NA	NA	NA	NA	KLF2	43515	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	17218539	17219391	17218963	Y	MED26,HAUS8,MYO9B	HAUS8,MYO9B	NA	NA	NA	NA	MYO9B	33948	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	18131070	18131394	18131314	Y	FCHO1,PDE4C,ARRDC2,MAST3	ARRDC2	NA	NA	NA	NA	ARRDC2	21129	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	18133045	18133309	18133130	Y	FAM129C,MAP1S,FCHO1,FCHO1,LRRC25,IFI30,ELL,ARRDC2,ARRDC2	ARRDC2	NA	NA	NA	NA	ARRDC2	23104	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr19	18485152	18485556	18485412	Y	ARRDC2,ARRDC2,IFI30,ELL,LRRC25	PGPEP1,GDF15,SSBP4	NA	NA	NA	NA	GDF15	1611	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	18497624	18497977	18497708	Y	PDE4C,GDF15	PGPEP1,GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	GDF15	14083	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	18526337	18526644	18526408	Y	CCDC124,IFI30,KLHL26,CRLF1,C19orf60,C19orf50,SSBP4	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	1030	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	18527231	18527472	18527362	Y	LSM4,SSBP4,ISYNA1,ISYNA1	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	202	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	18527701	18528040	18527800	Y	KCNN1,ARRDC2,ARRDC2,IL12RB1,IFI30,JUND,PGPEP1,LRRC25,SSBP4	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	27	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	18528263	18528792	18528577	Y	UPF1,ARRDC2,ARRDC2,IFI30,PGPEP1,UBA52,C19orf60,LRRC25,SSBP4	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	589	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	19143307	19143510	19143378	Y	DDX49,SUGP1,NR2C2AP,SUGP2,ARMC6	ARMC6,SUGP2,SLC25A42	NA	NA	NA	NA	SUGP2	475	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	19600012	19600395	19600260	Y	RFXANK,MAU2,GATAD2A,PBX4,GMIP	NDUFA13,TSSK6,YJEFN3	NA	NA	NA	NA	NDUFA13	24150	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	28265126	28266155	28265940	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1436293	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	30447917	30448294	30448014	Y	NA	URI1	NA	NA	NA	NA	URI1	35366	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	34301645	34301872	34301668	Y	NA	KCTD15	NA	NA	NA	NA	KCTD15	16807	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	35809679	35810380	35810036	Y	GRAMD1A,FXYD5,FXYD5,FXYD5,USF2,FFAR2,U2AF1L4,IGFLR1,FFAR3	NA	NA	NA	NA	NA	USF2	51798	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	36720266	36720641	36720459	Y	ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF382,ZNF260,ZFP14,ZNF565,ZNF565	ZNF146,ZNF565	NA	NA	NA	NA	ZNF565	14518	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	37322216	37322466	37322299	Y	ZFP14,ZFP82,ZNF566,ZNF566,ZNF529,ZNF529,ZNF382,ZNF461,ZNF829,ZNF829,ZNF585B,ZNF568,ZNF420,ZNF383,ZNF790,ZNF345,ZNF345,ZNF345	ZNF345,ZNF790	NA	NA	NA	NA	ZNF345	16797	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	37830170	37830469	37830239	Y	NA	HKR1,ZNF527	ZNF527	IMR90	Hi-C	24141950	HKR1	28431	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	37953316	37953327	37953324	Y	NA	ZNF570,ZNF569	NA	NA	NA	NA	ZNF570	3160	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	38490005	38490506	38490269	Y	YIF1B,YIF1B,SPRED3,PSMD8,SIPA1L3	NA	NA	NA	NA	NA	SIPA1L3	94137	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	38491114	38491333	38491222	Y	PPP1R14A	NA	NA	NA	NA	NA	SIPA1L3	95246	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39150238	39150530	39150365	Y	NA	EIF3K,ACTN4	NA	NA	NA	NA	ACTN4	13949	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39167742	39168127	39167771	Y	NA	ACTN4	NA	NA	NA	NA	ACTN4	31453	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39175000	39175365	39175141	Y	NFKBIB,HNRNPL,EIF3K	ACTN4	NA	NA	NA	NA	ACTN4	38711	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39177340	39177518	39177421	Y	RASGRP4,NFKBIB,HNRNPL	ACTN4	NA	NA	NA	NA	ACTN4	41051	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39182594	39182977	39182723	Y	PAK4,ACTN4	ACTN4	NA	NA	NA	NA	ACTN4	46305	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr19	39184148	39184440	39184342	Y	C19orf33,PSMD8,PAK4,MRPS12,MRPS12,FBXO27,ACTN4	ACTN4	NA	NA	NA	NA	ACTN4	47859	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr19	39564346	39564568	39564426	Y	ZFP36,HNRNPL,NFKBIB	FBXO27,PAK4	PAPL,SAMD4B,GMFG,LRFN1	IMR90	Hi-C	24141950	FBXO27	42921	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39621407	39621638	39621523	Y	NA	PAK4	NA	NA	NA	NA	PAK4	6997	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39627416	39627544	39627474	Y	NA	PAK4	NA	NA	NA	NA	PAK4	13006	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39849240	39849632	39849436	Y	NA	GMFG,SAMD4B,PAF1,MED29,ZFP36,MIR4530	MED29,PAF1	IMR90	Hi-C	24141950	SAMD4B	18204	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	39894353	39894945	39894613	Y	GMFG,SAMD4B,PAF1,MED29,ZFP36,SUPT5H,SUPT5H,PLEKHG2	PAF1,MED29,ZFP36,MIR4530,PLEKHG2,RPS16,SUPT5H	NA	NA	NA	NA	ZFP36	508	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	40315090	40315548	40315357	Y	NA	DYRK1B,FBL	NA	NA	NA	NA	DYRK1B	7293	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	40441593	40441941	40441767	Y	NA	CTC-471F3.4,PSMC4,ZNF546	NA	NA	NA	NA	CTC-471F3.4	5693	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	40543471	40543758	40543711	Y	SPTBN4,ZNF546,ZNF780B	ZNF780B	NA	NA	NA	NA	ZNF780B	16358	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	41814398	41814719	41814610	Y	HNRNPUL1,TMEM91,TGFB1,CCDC97,B9D2	HNRNPUL1,CCDC97,TMEM91,TGFB1	NA	NA	NA	NA	CCDC97	304	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42028325	42028365	42028354	Y	NA	NA	CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21	IMR90	Hi-C	24141950	ATP5SL	83703	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42037922	42038313	42037990	Y	CCDC97,TGFB1,B9D2,TMEM91,CEACAM4,CEACAM21,ARHGEF1	NA	LOC100505495	IMR90	Hi-C	24141950	ATP5SL	93300	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42430880	42431141	42430883	Y	NA	ARHGEF1,RABAC1	NA	NA	NA	NA	RABAC1	30401	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42772295	42772768	42772477	Y	NA	ZNF526,GSK3A,ERF,CIC,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	1606	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	42772804	42773312	42773020	Y	CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE	GSK3A,ERF,CIC,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	2115	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42774379	42774759	42774668	Y	CEACAM8,CEACAM3,ARHGEF1,ZNF574,POU2F2,DEDD2,ERF,CIC	GSK3A,ERF,CIC,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	3690	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42775992	42776735	42776352	Y	NA	GSK3A,ERF,CIC,PAFAH1B3,TMEM145	NA	NA	NA	NA	CIC	5303	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42784087	42784212	42784170	Y	CEACAM8,CEACAM3,DEDD2	GSK3A,ERF,CIC,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13398	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	42784527	42784991	42784716	Y	ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8	GSK3A,ERF,CIC,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13838	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	44269192	44269953	44269534	Y	IRGQ,ZNF222,PLAUR,C19orf61,KCNN4	SMG9,KCNN4	NA	NA	NA	NA	SMG9	12050	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	45248499	45249479	45248793	Y	NA	NA	NA	NA	NA	NA	BCL3	0	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr19	45350775	45351289	45350997	Y	BCL3,PVRL2,RELB	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	3343	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	45393623	45393866	45393750	Y	ZNF285,ZNF180,GEMIN7,GEMIN7,CLASRP,TOMM40	PVRL2,TOMM40,APOE	NA	NA	NA	NA	TOMM40	1797	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	45945937	45946679	45946251	Y	GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N	ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2	K562,MCF7	ChIA-PET	22265404	FOSB	22574	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	45946690	45947113	45946759	Y	GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N	ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2	K562,MCF7	ChIA-PET	22265404	FOSB	22140	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	45953764	45954783	45954182	Y	NA	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	14470	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr19	45980345	45980732	45980359	Y	GIPR,FBXO46,RELB,CLASRP,TRAPPC6A,FOSB,PPM1N	FOSB,ERCC1,PPM1N,RTN2,VASP	NA	NA	NA	NA	ERCC1	259	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	47662714	47662828	47662771	Y	NA	SAE1,ZC3H4	NA	NA	NA	NA	ZC3H4	47705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	47746329	47746738	47746506	Y	SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24	BBC3,CCDC9,PRR24,C5AR1	NA	NA	NA	NA	CCDC9	10499	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr19	47776748	47776969	47776841	Y	GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1	BBC3,CCDC9,PRR24,C5AR1	NA	NA	NA	NA	PRR24	606	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr19	47792934	47793257	47793053	Y	NA	CCDC9,PRR24,C5AR1	NA	NA	NA	NA	C5AR1	1654	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	47814150	47814595	47814332	Y	ZC3H4,NAPA,DHX34,CCDC9,C5AR1,GPR77	PRR24,C5AR1,DHX34	NA	NA	NA	NA	C5AR1	22870	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	48102180	48102576	48102418	Y	NA	NA	SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NAPA	85683	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	48103581	48103982	48103689	Y	GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1	NA	GLTSCR1,NAPA	MCF7	ChIA-PET	22265404	NAPA	87084	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	48996099	48996379	48996219	Y	NA	GRWD1,CYTH2	NA	NA	NA	NA	CYTH2	25810	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	49092091	49092636	49092297	Y	BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11	SPHK2,RPL18,DBP	NA	NA	NA	NA	SPHK2	27912	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	49465555	49466264	49465736	Y	IZUMO1,PPP1R15A,CD37,FTL	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	294	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	49466802	49467527	49467169	Y	IZUMO1,PPP1R15A,CD37,FTL	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	244	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	49495555	49495708	49495609	Y	SPHK2,SPHK2,BCAT2,NUCB1,TRPM4	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	RUVBL2	850	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	50116585	50116794	50116665	Y	NA	NOSIP,PRR12,RRAS,SCAF1	NA	NA	NA	NA	PRR12	23685	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr19	51287900	51288107	51288100	Y	NA	C19orf48	NA	NA	NA	NA	C19orf48	18079	CAGE	1C3IKEI	hg19	FANTOM5	4.59376854066365
chr19	52192085	52192767	52192400	Y	ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577	MIRLET7E	NA	NA	NA	NA	MIRLET7E	1272	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr19	52697339	52697517	52697506	Y	ZNF350,ZNF432,ZNF836,ZNF83,ZNF808,ZNF766	ZNF836,PPP2R1A	NA	NA	NA	NA	PPP2R1A	6047	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	53237186	53237523	53237297	Y	ZNF665,ZNF415,ZNF415,ZNF160,ZNF610,ZNF528,ZNF808,ZNF83,ZNF611,ZNF611	ZNF83,ZNF611	NA	NA	NA	NA	ZNF611	860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	53727403	53727861	53727738	Y	NA	ZNF677	NA	NA	NA	NA	ZNF677	28290	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr19	54048513	54048640	54048574	Y	NA	ZNF331	NA	NA	NA	NA	ZNF331	26278	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	54373735	54373974	54373935	Y	VSTM1,TFPT,OSCAR,MBOAT7,LILRB3,LILRB2,LILRA6,LILRA5,LILRA3,LILRA3,CNOT3,ZNF765,ZNF761,ZNF813,NLRP12,NLRP12,MYADM,MYADM,MYADM	MYADM,PRKCG,CACNG7	NA	NA	NA	NA	MYADM	6258	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	55699968	55700281	55700219	Y	NA	SYT5	NA	NA	NA	NA	SYT5	10159	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	56061327	56061704	56061673	Y	NA	ZNF579,ZNF524,FIZ1	SGK110	K562	ChIA-PET	22265404	ZNF579	28507	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	56116208	56117068	56116734	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,U2AF2	NA	NA	NA	NA	FIZ1	4872	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr19	56224436	56224703	56224570	Y	TMEM150B	EPN1	NA	NA	NA	NA	EPN1	39844	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	58237757	58238155	58237774	Y	NA	ZNF551,ZNF776,ZNF586	ZNF154	IMR90	Hi-C	24141950	ZNF776	18009	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr19	58912594	58912944	58912773	Y	ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324	A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF324B	NA	NA	NA	NA	ZNF584	1723	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr2	314323	314661	314512	Y	NA	NA	SNTG2	IMR90	Hi-C	24141950	ACP1	52183	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	1608919	1609202	1609060	Y	PXDN	NA	NA	NA	NA	NA	SNTG2	664365	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	1725652	1725860	1725698	Y	NA	NA	NA	NA	NA	NA	SNTG2	781098	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	3340825	3341028	3341010	Y	NA	TSSC1,TRAPPC12	NA	NA	NA	NA	TSSC1	38625	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	9374844	9375591	9375054	Y	YWHAQ,ASAP2	ASAP2	NA	NA	NA	NA	ASAP2	29950	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	9391833	9392063	9392058	Y	NA	ASAP2	NA	NA	NA	NA	ASAP2	46939	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	9427801	9428115	9428020	Y	YWHAQ,ITGB1BP1,ASAP2	NA	NA	NA	NA	NA	ASAP2	82907	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	9678248	9678641	9678477	Y	ADAM17	ADAM17	NA	NA	NA	NA	ADAM17	15280	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	9686288	9686554	9686518	Y	NA	ADAM17	NA	NA	NA	NA	ADAM17	7367	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	9688603	9688902	9688848	Y	ADAM17	ADAM17	NA	NA	NA	NA	ADAM17	5019	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	9941222	9941554	9941329	Y	ADAM17,KLF11,KLF11	TAF1B	YWHAQ,KLF11,CYS1,ADAM17,ODC1,RRM2,GRHL1,TAF1B,HPCAL1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TAF1B	39929	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	10075100	10075410	10075131	Y	TAF1B	GRHL1	GRHL1	IMR90	Hi-C	24141950	GRHL1	7931	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	10425680	10425925	10425803	Y	HPCAL1	HPCAL1	HPCAL1,RRM2,C2orf48,MIR4261	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HPCAL1	15090	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	10441145	10441558	10441458	Y	KLF11	HPCAL1	ODC1	IMR90	Hi-C	24141950	HPCAL1	130	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr2	10489892	10489997	10489924	Y	HPCAL1	HPCAL1	NA	NA	NA	NA	HPCAL1	48877	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	10501440	10501782	10501611	Y	C2orf48	NA	NA	NA	NA	NA	HPCAL1	60425	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	10550434	10550795	10550555	Y	HPCAL1,HPCAL1	ODC1	ODC1	IMR90	Hi-C	24141950	ODC1	35835	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr2	11270081	11270242	11270156	Y	KCNF1,C2orf50	PQLC3	NA	NA	NA	NA	PQLC3	23082	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	11352501	11352895	11352887	Y	NA	NA	NA	NA	NA	NA	PQLC3	59177	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	11483029	11483376	11483266	Y	NA	ROCK2	NA	NA	NA	NA	ROCK2	3080	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	12856062	12856442	12856137	Y	NA	TRIB2	NA	NA	NA	NA	TRIB2	1047	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	15464031	15464396	15464252	Y	NA	NA	NA	NA	NA	NA	NBAS	235058	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	15561739	15562014	15561765	Y	NA	NA	NA	NA	NA	NA	NBAS	137440	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	15603966	15604351	15604182	Y	NA	NA	NA	NA	NA	NA	NBAS	95103	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	15629690	15629929	15629800	Y	NA	NA	NA	NA	NA	NA	NBAS	69525	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	16463079	16463421	16463153	Y	NA	NA	NA	NA	NA	NA	RP11-120J4.1	455016	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	17967823	17967867	17967845	Y	MSGN1	GEN1,SMC6	NA	NA	NA	NA	SMC6	11642	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	20385260	20385778	20385600	Y	TTC32,HS1BP3	SDC1	NA	NA	NA	NA	SDC1	37416	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	20624612	20624982	20624777	Y	HS1BP3	RHOB	HS1BP3,RHOB,PUM2	IMR90	Hi-C	24141950	RHOB	19853	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	20793103	20793496	20793437	Y	APOB	NA	HS1BP3,RHOB,PUM2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HS1BP3	55353	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	20795868	20796230	20795893	Y	RHOB,HS1BP3	NA	HS1BP3,RHOB,PUM2	IMR90	Hi-C	24141950	HS1BP3	52619	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	20965440	20965780	20965672	Y	NA	NA	NA	NA	NA	NA	C2orf43	55102	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	23923305	23923445	23923375	Y	NA	NA	NA	NA	NA	NA	ATAD2B	224539	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	26946934	26947339	26946998	Y	C2orf28,C2orf28,HADHA,HADHB,C2orf18	AC015977.5,CENPA	NA	NA	NA	NA	CENPA	37818	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr2	28021914	28022357	28022176	Y	RBKS	MRPL33	NA	NA	NA	NA	MRPL33	29330	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	28083143	28083293	28083218	Y	RBKS	BRE,RBKS	NA	NA	NA	NA	BRE	27515	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	28134368	28134411	28134390	Y	NA	BRE,RBKS	NA	NA	NA	NA	RBKS	22403	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	28383730	28384110	28383893	Y	NA	NA	NA	NA	NA	NA	FOSL2	229205	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	28492228	28492339	28492284	Y	NA	NA	NA	NA	NA	NA	FOSL2	120976	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	28519223	28519459	28519305	Y	RBKS,PPP1CB,PPP1CB,FOSL2	NA	NA	NA	NA	NA	FOSL2	93856	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	29009696	29009902	29009742	Y	FOSL2,PPP1CB,PPP1CB	PPP1CB	NA	NA	NA	NA	PPP1CB	37190	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	29075660	29075992	29075826	Y	TRMT61B	TRMT61B,WDR43	NA	NA	NA	NA	TRMT61B	15175	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	30807812	30808169	30807846	Y	NA	NA	NA	NA	NA	NA	LCLAT1	139720	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	32166229	32166498	32166237	Y	NA	NA	NA	NA	NA	NA	MEMO1	67801	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	33805444	33805464	33805454	Y	RASGRP3	FAM98A	NA	NA	NA	NA	FAM98A	16985	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	36712578	36712925	36712822	Y	CRIM1,FEZ2	NA	NA	NA	NA	NA	CRIM1	131509	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	36790074	36790520	36790216	Y	NA	NA	NA	NA	NA	NA	FEZ2	80710	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	36791809	36792197	36792002	Y	CRIM1	NA	NA	NA	NA	NA	FEZ2	79033	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	37116938	37117262	37117216	Y	NA	NA	NA	NA	NA	NA	STRN	74353	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	37763462	37763512	37763507	Y	FAM82A1,CDC42EP3	NA	NA	NA	NA	NA	QPCT	193745	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	37789550	37789826	37789587	Y	EIF2AK2,CDC42EP3	NA	CDC42EP3,QPCT	IMR90	Hi-C	24141950	CDC42EP3	173785	CAGE	1C3IKEI	hg19	FANTOM5	7.0437784290176
chr2	37811087	37811457	37811150	Y	NA	NA	CDC42EP3	IMR90	Hi-C	24141950	CDC42EP3	152154	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	37852383	37852553	37852466	Y	EIF2AK2,EIF2AK2,QPCT,CYP1B1,CDC42EP3	NA	NA	NA	NA	NA	CDC42EP3	111058	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	37880894	37881162	37881056	Y	EIF2AK2,QPCT,CYP1B1,CDC42EP3	NA	NA	NA	NA	NA	CDC42EP3	82449	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	39390817	39391081	39390949	Y	CDKL4	SOS1	NA	NA	NA	NA	SOS1	41331	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	40484262	40484526	40484482	Y	NA	NA	NA	NA	NA	NA	SLC8A1	351667	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	40628782	40629514	40629399	Y	NA	NA	NA	NA	NA	NA	SLC8A1	206679	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	42360195	42360705	42360352	Y	EML4	EML4	EML4,COX7A2L,LOC388942	IMR90	Hi-C	24141950	EML4	33785	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	43037224	43037999	43037611	Y	NA	NA	THADA,ZFP36L2,LOC100129726,HAAO	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	AC025750.7	278642	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	46303554	46303874	46303714	Y	NA	NA	NA	NA	NA	NA	EPAS1	214932	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	46825586	46825695	46825639	Y	NA	CRIPT,PIGF	NA	NA	NA	NA	CRIPT	15860	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	47195176	47195614	47195246	Y	RHOQ,TTC7A,MCFD2	MCFD2	NA	NA	NA	NA	MCFD2	28182	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	47270774	47271231	47270943	Y	NA	NA	NA	NA	NA	NA	MCFD2	103780	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	54787503	54787764	54787623	Y	RTN4,SPTBN1	NA	NA	NA	NA	NA	SPTBN1	106081	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr2	55248216	55248544	55248355	Y	NA	NA	NA	NA	NA	NA	RTN4	89213	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	55320625	55320761	55320684	Y	RTN4	RTN4	C2orf63,EML6,RTN4	IMR90	Hi-C	24141950	RTN4	16996	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	55450545	55450658	55450592	Y	CCDC88A,EML6,RTN4	RPS27A,MTIF2	NA	NA	NA	NA	RPS27A	6381	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	56267618	56267636	56267627	Y	NA	NA	NA	NA	NA	NA	PNPT1	348573	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	58271974	58272513	58272036	Y	NA	NA	NA	NA	NA	NA	VRK2	139188	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	61580039	61580318	61580309	Y	NA	NA	NA	NA	NA	NA	USP34	115586	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	61991278	61991660	61991557	Y	NA	NA	XPO1,FAM161A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM161A	87618	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr2	64978173	64978610	64978385	Y	CEP68	SERTAD2	SERTAD2,LOC339807,AFTPH	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	2034	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	64994926	64995226	64995021	Y	SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2	SERTAD2	SERTAD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	18787	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	65326595	65326952	65326834	Y	NA	CEP68,RAB1A	NA	NA	NA	NA	RAB1A	28288	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	67625110	67625487	67625291	Y	ETAA1	ETAA1	NA	NA	NA	NA	ETAA1	2659	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	68263709	68263719	68263714	Y	NA	NA	NA	NA	NA	NA	C1D	72361	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	68472906	68473226	68473141	Y	PPP3R1	PPP3R1	NA	NA	NA	NA	PPP3R1	8143	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	68511997	68512372	68512184	Y	NA	PPP3R1,CNRIP1	NA	NA	NA	NA	PPP3R1	30628	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	69250610	69250802	69250769	Y	NA	ANTXR1	NA	NA	NA	NA	ANTXR1	12300	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	69309666	69309994	69309927	Y	NA	NA	NA	NA	NA	NA	ANTXR1	71356	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	69424670	69425029	69424849	Y	NA	NA	NA	NA	NA	NA	ANTXR1	186360	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	70141198	70141461	70141241	Y	NA	SNRNP27,MXD1,ASPRV1	NA	NA	NA	NA	MXD1	18378	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	72748040	72748317	72748179	Y	NA	NA	NA	NA	NA	NA	EXOC6B	302853	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	74446656	74447054	74446868	Y	NA	MOB1A,MTHFD2	NA	NA	NA	NA	MTHFD2	22967	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	75798121	75798484	75798332	Y	NA	NA	NA	NA	NA	NA	MRPL19	73425	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	85362106	85362578	85362371	Y	NA	LSM3P3,TCF7L1	NA	NA	NA	NA	TCF7L1	3573	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	85764802	85765239	85764815	Y	SH2D6,USP39	MAT2A,GGCX,VAMP8,VAMP5	NA	NA	NA	NA	MAT2A	514	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	86113603	86114063	86113862	Y	CAPG,GNLY,ST3GAL5	ST3GAL5,AC105053.4	LOC284950	IMR90	Hi-C	24141950	ST3GAL5	74	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr2	86121717	86122002	86121863	Y	NA	ST3GAL5,AC105053.4	ST3GAL5,POLR1A	IMR90	Hi-C	24141950	AC105053.4	7314	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	86151754	86152089	86151850	Y	NA	ST3GAL5,AC105053.4	POLR1A,ST3GAL5,GNLY,ATOH8,LOC284950,LOC90784	IMR90	Hi-C	24141950	AC105053.4	37351	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	86163596	86163679	86163638	Y	NA	ST3GAL5,AC105053.4	POLR1A,ST3GAL5,ATOH8,LOC90784,LOC284950	IMR90	Hi-C	24141950	AC105053.4	49193	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	86299445	86299644	86299569	Y	NA	POLR1A,PTCD3	NA	NA	NA	NA	POLR1A	31634	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	86722974	86723324	86723287	Y	NA	NA	NA	NA	NA	NA	KDM3A	57204	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	90485310	90485405	90485339	Y	NA	NA	NA	NA	NA	NA	RPIA	1496148	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	96871048	96871111	96871053	Y	ASTL,DUSP2,KIAA1310,ARID5A,TMEM127	STARD7	NA	NA	NA	NA	STARD7	1452	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	98367978	98368166	98368128	Y	TMEM131,ANKRD36B,ZAP70,ZAP70	NA	NA	NA	NA	NA	ACTR1B	89408	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	98465985	98466159	98466067	Y	NA	NA	NA	NA	NA	NA	TMEM131	144229	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	100082054	100082282	100082201	Y	NA	REV1	NA	NA	NA	NA	REV1	22215	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	100484034	100484497	100484368	Y	NA	NA	NA	NA	NA	NA	REV1	379537	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	101435496	101435968	101435616	Y	NPAS2	NPAS2	NA	NA	NA	NA	NPAS2	882	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	101680419	101680493	101680454	Y	NA	NA	NA	NA	NA	NA	RPL31	64242	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	102353138	102353817	102353456	Y	IL1R1,RNF149,MAP4K4,MAP4K4	MAP4K4	NA	NA	NA	NA	MAP4K4	41826	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	105664202	105664255	105664229	Y	NA	MRPS9	NA	NA	NA	NA	MRPS9	11761	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	106008939	106009297	106009286	Y	NA	FHL2	NA	NA	NA	NA	FHL2	43673	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	109514642	109514975	109514799	Y	NA	NA	NA	NA	NA	NA	CCDC138	113429	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	109855106	109855410	109855221	Y	NA	NA	NA	NA	NA	NA	CCDC138	453893	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	110871797	110872011	110872000	Y	MALL	MALL	NA	NA	NA	NA	MALL	132	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr2	113058633	113059002	113058901	Y	NA	ZC3H8,ZC3H6	NA	NA	NA	NA	ZC3H6	27462	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	113388786	113388926	113388836	Y	NA	CHCHD5,AC079922.2,SLC20A1	NA	NA	NA	NA	AC079922.2	11042	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	113448603	113448987	113448785	Y	IL36B,IL36G,IL1RN,IL1B,IL1A	SLC20A1	POLR1B,CHCHD5,SLC20A1,CKAP2L,FLJ42351	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC20A1	47169	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	113450039	113450435	113450231	Y	IL36B,IL36G,PSD4,IL1RN,IL1B,IL1A	SLC20A1	SLC20A1,FLJ42351	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC20A1	48605	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	121624920	121625080	121625001	Y	NA	NA	NA	NA	NA	NA	GLI2	133721	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	122226715	122226882	122226860	Y	NA	NA	NA	NA	NA	NA	RNU4ATAC	59575	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	124260647	124260891	124260797	Y	NA	NA	NA	NA	NA	NA	TSN	1767968	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	127863441	127863795	127863513	Y	NA	BIN1	NA	NA	NA	NA	BIN1	510	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	127975624	127975823	127975720	Y	NA	NA	NA	NA	NA	NA	CYP27C1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	128598749	128599093	128599053	Y	IWS1,SFT2D3,AMMECR1L	WDR33,POLR2D	NA	NA	NA	NA	POLR2D	14638	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	130201021	130201117	130201085	Y	NA	NA	NA	NA	NA	NA	MZT2B	736193	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	131148815	131149203	131148908	Y	FAM123C,FAM123C,FAM123C,CCDC115,PTPN18	PTPN18	NA	NA	NA	NA	PTPN18	37235	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	131485043	131485533	131485339	Y	NA	NA	NA	NA	NA	NA	FAM168B	363500	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	131555592	131555820	131555689	Y	CCDC115	NA	PLEKHB2,FAM168B	K562,MCF7	ChIA-PET	22265404	FAM168B	293213	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	133011418	133011623	133011538	Y	NA	NA	NA	NA	NA	NA	GPR39	160524	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	136268329	136268541	136268430	Y	NA	ZRANB3,R3HDM1	NA	NA	NA	NA	ZRANB3	18265	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	142222584	142223129	142223081	Y	NA	NA	NA	NA	NA	NA	LRP1B	664141	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	143630782	143631707	143631171	Y	KYNU	NA	NA	NA	NA	NA	LRP1B	743512	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	151022837	151023057	151022971	Y	NA	NA	RND3	MCF7	ChIA-PET	22265404	RND3	370468	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr2	153275296	153275683	153275311	Y	FMNL2	NA	NA	NA	NA	NA	FMNL2	85545	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	153277978	153278373	153278235	Y	NA	NA	NA	NA	NA	NA	FMNL2	88227	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	153311931	153312064	153312029	Y	FMNL2	NA	NA	NA	NA	NA	FMNL2	122180	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	153318771	153319092	153318943	Y	NA	NA	NA	NA	NA	NA	FMNL2	129020	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	153599082	153599296	153599189	Y	NA	ARL6IP6,PRPF40A	NA	NA	NA	NA	PRPF40A	26571	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	157190328	157191531	157191235	Y	GPD2,NR4A2	NR4A2	GPD2	IMR90	Hi-C	24141950	NR4A2	5329	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	158084243	158084386	158084315	Y	NA	NA	GALNT5	IMR90	Hi-C	24141950	ACVR1	645988	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	160100045	160100277	160100255	Y	NA	WDSUB1	NA	NA	NA	NA	WDSUB1	41033	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	160646880	160647090	160646985	Y	NA	CD302	NA	NA	NA	NA	CD302	5663	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	160858239	160858486	160858430	Y	NA	NA	NA	NA	NA	NA	PLA2R1	58635	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	161098241	161098623	161098428	Y	ITGB6	NA	TANK,ITGB6,RBMS1	IMR90	Hi-C	24141950	MIR4785	163770	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	161208357	161208687	161208675	Y	NA	NA	NA	NA	NA	NA	MIR4785	53706	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	161244338	161244737	161244615	Y	NA	MIR4785	NA	NA	NA	NA	MIR4785	17656	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	162197345	162197490	162197464	Y	NA	PSMD14,AC009299.5	NA	NA	NA	NA	AC009299.5	1508	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	165430240	165430431	165430256	Y	NA	NA	NA	NA	NA	NA	COBLL1	267758	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	166734901	166734996	166734949	Y	NA	NA	NA	NA	NA	NA	TTC21B	73357	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	170777121	170777463	170777246	Y	NA	NA	NA	NA	NA	NA	UBR3	95153	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	172957811	172957994	172957904	Y	DYNC1I2,DLX1,DLX2	DLX1,DLX2	NA	NA	NA	NA	DLX2	7634	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	172960097	172960530	172960322	Y	DLX1,DLX2	DLX1,DLX2	NA	NA	NA	NA	DLX2	5098	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	172962291	172962684	172962615	Y	NA	DLX1,DLX2	NA	NA	NA	NA	DLX2	2944	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	173544545	173544661	173544603	Y	NA	NA	PDK1,RAPGEF4	IMR90	Hi-C	24141950	AC093818.1	125221	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	173876038	173876102	173876070	Y	NA	NA	NA	NA	NA	NA	MLK7-AS1	268662	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	175762241	175762347	175762322	Y	NA	NA	NA	NA	NA	NA	H3F3AP4	179736	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	176969861	176970296	176970124	Y	HOXD13,HOXD9,HOXD8,HOXD8,HOXD3,HOXD11,HOXD10	HOXD11	NA	NA	NA	NA	HOXD11	2917	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	178104644	178105169	178104872	Y	NFE2L2,NFE2L2,HNRNPA3	HNRNPA3,MIR3128	NA	NA	NA	NA	MIR3128	13569	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	186616540	186616923	186616825	Y	NA	FSIP2	NA	NA	NA	NA	FSIP2	15185	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	186832070	186832214	186832142	Y	NA	NA	NA	NA	NA	NA	FSIP2	230715	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	187263813	187264095	187263899	Y	NA	NA	NA	NA	NA	NA	ZC3H15	84788	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	187390995	187391341	187391159	Y	NA	ZC3H15	NA	NA	NA	NA	ZC3H15	42112	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	188404228	188404596	188404560	Y	TFPI	TFPI	NA	NA	NA	NA	TFPI	23891	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	188464486	188464724	188464607	Y	NA	TFPI	GULP1	IMR90	Hi-C	24141950	TFPI	35999	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	191814146	191814507	191814301	Y	STAT1	AC067945.3	NA	NA	NA	NA	AC067945.3	41786	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	194142383	194142416	194142400	Y	NA	NA	NA	NA	NA	NA	SDPR	1432402	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	197195800	197196140	197196081	Y	NA	NA	NA	NA	NA	NA	STK17B	156573	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	201172384	201172536	201172446	Y	NA	SPATS2L	NA	NA	NA	NA	SPATS2L	3780	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	202100663	202100910	202100770	Y	NA	CASP8	NA	NA	NA	NA	CASP8	4497	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	202209480	202209837	202209779	Y	NA	STRADB	NA	NA	NA	NA	STRADB	40744	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	202522160	202522705	202522330	Y	NA	TMEM237,MPP4	NA	NA	NA	NA	TMEM237	15867	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	202898182	202898685	202898353	Y	TMEM237,FZD7	NA	NA	NA	NA	NA	PSMA2P3	143335	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	204373438	204373815	204373626	Y	NA	RAPH1	NA	NA	NA	NA	RAPH1	24318	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	207669258	207669658	207669463	Y	NA	FASTKD2,MDH1B	NA	NA	NA	NA	MDH1B	40987	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	208016492	208017045	208016857	Y	CREB1	KLF7	NA	NA	NA	NA	KLF7	12946	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	211404935	211405006	211404955	Y	CPS1	NA	NA	NA	NA	NA	LANCL1	64559	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	216223263	216223304	216223303	Y	NA	ATIC	NA	NA	NA	NA	ATIC	48723	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	218088198	218088590	218088283	Y	NA	NA	DIRC3,IGFBP5,IGFBP2	IMR90	Hi-C	24141950	IGFBP5	529950	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	219434664	219435146	219434778	Y	USP37	USP37,RQCD1,PLCD4	NA	NA	NA	NA	RQCD1	3361	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	219773515	219774011	219773826	Y	USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A	CDK5R2	NA	NA	NA	NA	CDK5R2	48366	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	222826690	222827411	222827014	Y	NA	NA	EPHA4	IMR90	Hi-C	24141950	EPHA4	389768	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	223447202	223447309	223447256	Y	NA	NA	NA	NA	NA	NA	FARSB	71747	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	223462160	223462364	223462326	Y	NA	NA	NA	NA	NA	NA	FARSB	56692	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr2	224413942	224414282	224414142	Y	NA	NA	NA	NA	NA	NA	SCG2	50939	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr2	224428219	224428432	224428353	Y	NA	SCG2	SCG2	IMR90	Hi-C	24141950	SCG2	36789	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	224569350	224569680	224569515	Y	NA	NA	AP1S3	IMR90	Hi-C	24141950	SCG2	104129	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	224774056	224774145	224774098	Y	WDFY1	WDFY1,MRPL44	NA	NA	NA	NA	WDFY1	33959	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	224871549	224871941	224871745	Y	NA	SERPINE2	NA	NA	NA	NA	SERPINE2	30095	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	224951199	224951592	224951399	Y	NA	SERPINE2	NA	NA	NA	NA	SERPINE2	49163	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	227517160	227517436	227517301	Y	IRS1	NA	IRS1,LOC646736	IMR90	Hi-C	24141950	IRS1	145039	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr2	227526564	227526855	227526789	Y	IRS1	NA	IRS1,LOC646736	IMR90	Hi-C	24141950	IRS1	135620	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	228576764	228576787	228576777	Y	NA	SLC19A3	NA	NA	NA	NA	SLC19A3	3941	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	230309727	230309993	230309861	Y	TRIP12,PID1	NA	NA	NA	NA	NA	PID1	175726	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	230736228	230736612	230736477	Y	SP110	FBXO36,TRIP12	NA	NA	NA	NA	FBXO36	48406	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr2	231658746	231658958	231658902	Y	SP140L,SP100,SP100	NA	NA	NA	NA	NA	ITM2C	68396	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	231922388	231922877	231922602	Y	NA	C2orf72,PSMD1	NA	NA	NA	NA	PSMD1	2810	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	232468888	232470128	232469532	Y	DIS3L2,PTMA,NMUR1	NA	NA	NA	NA	NA	LINC00471	91838	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	232478879	232479328	232479053	Y	NA	NA	NA	NA	NA	NA	PTMA	90277	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr2	232507409	232507767	232507481	Y	NA	NA	PDE6D	IMR90	Hi-C	24141950	PTMA	61838	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	233766797	233767190	233766879	Y	NA	C2orf82	NA	NA	NA	NA	C2orf82	46817	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr2	234074569	234074943	234074824	Y	NA	ATG16L1	NA	NA	NA	NA	ATG16L1	41754	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	235748055	235748426	235748121	Y	NA	NA	TRPM8,SH3BP4	IMR90	Hi-C	24141950	SH3BP4	110191	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	237073092	237073409	237073337	Y	NA	AC079135.1,GBX2	NA	NA	NA	NA	AC079135.1	681	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	237482983	237483115	237483021	Y	NA	NA	NA	NA	NA	NA	GBX2	407971	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	237614069	237614267	237614165	Y	NA	NA	IQCA1,CXCR7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	COPS8	377688	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	237784498	237784842	237784604	Y	NA	NA	NA	NA	NA	NA	COPS8	207113	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238065108	238065400	238065254	Y	COL6A3	NA	COL6A3,COPS8,MLPH,LRRFIP1	IMR90	Hi-C	24141950	AC105760.2	72648	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238191599	238191938	238191660	Y	NA	NA	COL6A3,COPS8,MLPH,RAB17,LRRFIP1	IMR90	Hi-C	24141950	COL6A3	129080	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238374283	238374521	238374346	Y	COL6A3	AC112721.2,MLPH	LRRFIP1,MLPH,PRLH,COL6A3,RAB17	IMR90	Hi-C	24141950	MLPH	17550	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238383141	238383356	238383272	Y	NA	AC112721.2,MLPH	LRRFIP1,MLPH,COL6A3,RAB17,COPS8,PRLH	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MLPH	8715	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238391204	238391436	238391383	Y	LRRFIP1,MLPH	AC112721.2,MLPH	NA	NA	NA	NA	MLPH	635	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238396973	238397455	238397139	Y	NA	MLPH	NA	NA	NA	NA	MLPH	4902	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238585897	238586071	238585979	Y	UBE2F,LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	51678	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238596328	238596696	238596497	Y	LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	62109	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	238611190	238611575	238611206	Y	LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	76971	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	239347857	239348510	239348285	Y	ASB1	ASB1	NA	NA	NA	NA	ASB1	14474	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr2	240196255	240196671	240196554	Y	HDAC4	NA	NA	NA	NA	NA	HDAC4	124677	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	240196933	240197336	240197049	Y	HDAC4	NA	NA	NA	NA	NA	HDAC4	124012	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr2	240201720	240202445	240202126	Y	NA	NA	NA	NA	NA	NA	HDAC4	118903	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	240302695	240302977	240302812	Y	HDAC4	HDAC4	NA	NA	NA	NA	HDAC4	18371	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	240867818	240868062	240867906	Y	NA	NA	NA	NA	NA	NA	NDUFA10	94757	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	240884529	240884700	240884591	Y	NA	NA	NA	NA	NA	NA	NDUFA10	78119	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	241313615	241314182	241313884	Y	NA	NA	GPC1	IMR90	Hi-C	24141950	GPC1	58906	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	242262018	242262304	242262161	Y	NA	SEPT2,HDLBP,FARP2	NA	NA	NA	NA	HDLBP	7542	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	242304310	242304654	242304483	Y	FARP2	HDLBP,FARP2	NA	NA	NA	NA	FARP2	10652	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	242484648	242485001	242484705	Y	NA	STK25,BOK	NA	NA	NA	NA	BOK	11135	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr2	242703403	242703714	242703570	Y	ATG4B,D2HGDH	D2HGDH	NA	NA	NA	NA	D2HGDH	31409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	247683	247718	247701	Y	NA	C20orf96,ZCCHC3,AL034548.1	NA	NA	NA	NA	C20orf96	21672	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	352488	352859	352625	Y	SRXN1,FAM110A,RBCK1	SOX12,NRSN2,RP5-1103G7.4,TRIB3,RBCK1	NA	NA	NA	NA	TRIB3	6402	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	382514	382753	382693	Y	CSNK2A1,ZCCHC3,TRIB3,RBCK1	TRIB3,RBCK1	NA	NA	NA	NA	RBCK1	3389	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	623135	623319	623297	Y	NA	TCF15,SRXN1	NA	NA	NA	NA	SRXN1	8695	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	1332285	1332772	1332374	Y	C20orf46,SDCBP2	FKBP1A	NA	NA	NA	NA	FKBP1A	39034	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	3472887	3473113	3473000	Y	NA	ATRN	NA	NA	NA	NA	ATRN	23200	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	3909447	3909819	3909642	Y	RNF24,RNF24,PANK2	PANK2	NA	NA	NA	NA	PANK2	41961	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	3932717	3933076	3932937	Y	NA	NA	MIR103B2,PANK2	IMR90	Hi-C	24141950	RNF24	61153	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	4116351	4116485	4116423	Y	PANK2,PANK2,SMOX	SMOX	ADRA1D,SMOX	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SMOX	16724	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	4203123	4203484	4203336	Y	NA	ADRA1D	NA	NA	NA	NA	ADRA1D	24237	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	4493607	4493844	4493709	Y	NA	NA	ADRA1D	IMR90	Hi-C	24141950	RPS4XP2	115021	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	4674724	4674919	4674762	Y	NA	PRNP	NA	NA	NA	NA	PRNP	9842	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	5512444	5512652	5512587	Y	CDS2,TRMT6,CHGB,GPCPD1	NA	NA	NA	NA	NA	GPCPD1	77020	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr20	5900000	5900262	5900165	Y	GPCPD1,TRMT6	CHGB,TRMT6,MCM8	NA	NA	NA	NA	CHGB	9924	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	10455990	10456132	10456072	Y	NA	MKKS	NA	NA	NA	NA	MKKS	43120	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	10492212	10492484	10492413	Y	NA	NA	NA	NA	NA	NA	MKKS	79342	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	10652083	10652420	10652292	Y	JAG1	JAG1	NA	NA	NA	NA	JAG1	27069	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	17946136	17946538	17946496	Y	SNX5,SNX5	SNORD17,SNX5	NA	NA	NA	NA	SNX5	1085	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	18276093	18276447	18276109	Y	CSRP2BP	ZNF133	NA	NA	NA	NA	ZNF133	8972	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	19967147	19967464	19967305	Y	NA	NAA20	NA	NA	NA	NA	NAA20	28296	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	22842612	22842915	22842803	Y	NA	NA	NA	NA	NA	NA	FOXA2	278519	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	25214082	25214352	25214216	Y	ENTPD6,PYGB	ENTPD6,PYGB	NA	NA	NA	NA	PYGB	12353	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	25218471	25218756	25218634	Y	NA	ENTPD6,PYGB	NA	NA	NA	NA	PYGB	7949	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr20	25227906	25228088	25227908	Y	NA	PYGB	NA	NA	NA	NA	PYGB	1201	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	30182515	30183026	30182914	Y	NA	ID1	HM13	MCF7	ChIA-PET	22265404	ID1	8060	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr20	30260311	30260679	30260495	Y	NA	BCL2L1	NA	NA	NA	NA	BCL2L1	49113	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	30263216	30263335	30263276	Y	NA	BCL2L1	NA	NA	NA	NA	BCL2L1	46457	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	30300504	30300973	30300648	Y	NA	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	8819	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	30301047	30301377	30301326	Y	NA	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	8415	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	30307720	30308274	30308104	Y	POFUT1	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	1518	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	31063072	31063625	31063366	Y	NA	NA	ASXL1	IMR90	Hi-C	24141950	C20orf112	107251	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr20	32142835	32143155	32142948	Y	C20orf186,CDK5RAP1,CHMP4B	NA	NA	NA	NA	NA	CBFA2T2	66954	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	32803456	32803920	32803688	Y	NA	NA	ITCH,DYNLRB1,ASIP	IMR90	Hi-C	24141950	AHCY	93688	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	33861234	33861630	33861491	Y	NA	EDEM2,EIF6	NA	NA	NA	NA	EDEM2	2298	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	33908268	33908438	33908376	Y	NA	EDEM2,EIF6	FAM83C,EIF6	HELA	5C	22955621	EIF6	37480	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	34463368	34463773	34463624	Y	NFS1	RNU4-40P	NA	NA	NA	NA	RNU4-40P	9808	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	35234952	35235695	35235080	Y	NA	RP5-977B1.7,TGIF2,C20orf24	NA	NA	NA	NA	C20orf24	2815	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	36154671	36154957	36154793	Y	BLCAP,BLCAP,BLCAP	BLCAP	NA	NA	NA	NA	BLCAP	338	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	36693519	36693713	36693616	Y	RPRD1B	TTI1,RPRD1B	NA	NA	NA	NA	RPRD1B	33571	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	36772576	36772945	36772677	Y	RPRD1B,BPI	TGM2	NA	NA	NA	NA	TGM2	20035	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	36780859	36781241	36781066	Y	RPRD1B,RALGAPB,BPI	TGM2	NA	NA	NA	NA	TGM2	11739	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	36899646	36899868	36899757	Y	BPI	NA	NA	NA	NA	NA	TGM2	106666	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	39661985	39662084	39662008	Y	NA	RNU2-52P,TOP1	NA	NA	NA	NA	TOP1	6527	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	40321359	40321668	40321514	Y	NA	NA	CHD6	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHD6	76226	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	41789903	41790270	41790087	Y	NA	NA	NA	NA	NA	NA	SRSF6	294298	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	42286061	42286420	42286177	Y	SRSF6,L3MBTL1,MYBL2	RPL27AP,MYBL2	MYBL2	IMR90	Hi-C	24141950	RPL27AP	6898	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr20	42554497	42554746	42554685	Y	IFT52,TOX2	TOX2	NA	NA	NA	NA	TOX2	12993	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	43123975	43124199	43124088	Y	C20orf111,STK4,ADA,SERINC3	RPL37AP1,TTPAL,SERINC3,PKIG	NA	NA	NA	NA	TTPAL	21449	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	43517782	43518230	43517943	Y	NA	YWHAB,PABPC1L	PABPC1L	IMR90	Hi-C	24141950	YWHAB	5465	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	43582253	43582415	43582335	Y	NA	PABPC1L,TOMM34,STK4	NA	NA	NA	NA	TOMM34	4712	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	43689990	43690348	43690045	Y	NA	NA	NA	NA	NA	NA	STK4	96875	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	43972131	43972359	43972259	Y	NA	SDC4,SYS1,SYS1-DBNDD2	NA	NA	NA	NA	SDC4	2705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	44136889	44137182	44137082	Y	NA	NA	NA	NA	NA	NA	PIGT	94172	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	44410242	44410504	44410445	Y	NA	DNTTIP1,UBE2C,SNX21	NA	NA	NA	NA	DNTTIP1	8072	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	45870109	45870518	45870490	Y	ZMYND8,NCOA3	NA	NA	NA	NA	NA	ZMYND8	113049	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	45946049	45946481	45946179	Y	NA	ZMYND8	NA	NA	NA	NA	ZMYND8	37086	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr20	45960088	45960376	45960270	Y	ZMYND8	ZMYND8	NA	NA	NA	NA	ZMYND8	23191	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	46299616	46300006	46299878	Y	NCOA3,SULF2,SULF2	NA	NA	NA	NA	NA	SULF2	113354	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	47391442	47391734	47391549	Y	STAU1,PREX1	NA	NA	NA	NA	NA	PREX1	50686	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	47405213	47405452	47405443	Y	ZNFX1,PREX1	PREX1	NA	NA	NA	NA	PREX1	36968	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	47544338	47544681	47544534	Y	DDX27	ARFGEF2	NA	NA	NA	NA	ARFGEF2	7911	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	47547466	47547777	47547635	Y	ZNFX1,ARFGEF2	ARFGEF2	NA	NA	NA	NA	ARFGEF2	11039	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48165703	48166239	48166052	Y	PTGIS	PTGIS	NA	NA	NA	NA	PTGIS	16444	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48207635	48208270	48207977	Y	PTGIS	PTGIS	ZNFX1-AS1,ZNFX1,SLC9A8,KCNB1,PTGIS,B4GALT5,SPATA2	IMR90	Hi-C	24141950	PTGIS	24952	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48311078	48311758	48311363	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,CEBPB,B4GALT5	B4GALT5	NA	NA	NA	NA	B4GALT5	16657	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48391675	48392320	48391995	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,CEBPB,SLC9A8	SLC9A8	B4GALT5,SLC9A8,KCNB1,SPATA2	IMR90	Hi-C	24141950	SLC9A8	34930	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48646361	48646933	48646559	Y	NA	SNAI1	TMEM189-UBE2V1,UBE2V1,SNAI1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SNAI1	48825	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48717588	48717974	48717858	Y	NA	UBE2V1	NA	NA	NA	NA	UBE2V1	12522	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48770876	48771106	48770991	Y	NA	UBE2V1,TMEM189-UBE2V1,TMEM189,CEBPB	NA	NA	NA	NA	TMEM189	2541	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48838079	48838414	48838219	Y	SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB	CEBPB	PTPN1,CEBPB,LOC284751,FAM65C,MIR645	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CEBPB	32703	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48868757	48869061	48868987	Y	NA	NA	PTPN1,FAM65C,MIR645,CEBPB,LOC284751,PARD6B	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CEBPB	63381	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48900220	48901229	48900600	Y	SLC9A8,RNF114,SNAI1,TMEM189,CEBPB,PTPN1	NA	PTPN1,LOC284751,PARD6B,FAM65C,MIR645,CEBPB,TMEM189-UBE2V1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CEBPB	94844	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	48924890	48925591	48925260	Y	SLC9A8,RNF114,SNAI1,TMEM189,CEBPB,PTPN1	NA	NA	NA	NA	NA	CEBPB	119514	CAGE	1C3IKEI	hg19	FANTOM5	5.81877348484062
chr20	49032230	49032497	49032297	Y	NA	NA	LOC284751,CEBPB,TMEM189-UBE2V1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTPN1	92394	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	49055532	49055924	49055757	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTPN1	68967	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	49067387	49067853	49067497	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C,MIR645,PARD6B	IMR90	Hi-C	24141950	PTPN1	57038	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	49838536	49838841	49838768	Y	NA	NA	KCNG1	IMR90	Hi-C	24141950	KCNG1	200870	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	49982609	49983533	49983215	Y	KCNG1	NA	NA	NA	NA	NA	KCNG1	344943	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	50063853	50064072	50063963	Y	NA	NA	NA	NA	NA	NA	RP5-827A12.2	285000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	50178083	50178314	50178273	Y	NA	NA	NA	NA	NA	NA	RP5-827A12.2	170758	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	50180369	50180507	50180463	Y	NFATC2	NA	NA	NA	NA	NA	RP5-827A12.2	168565	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	50366772	50367203	50366881	Y	ZFP64,ATP9A	RP5-827A12.2,ATP9A	NA	NA	NA	NA	ATP9A	15970	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr20	50383575	50384083	50383723	Y	ATP9A	RP5-827A12.2,ATP9A	NA	NA	NA	NA	ATP9A	402	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr20	52195908	52196455	52196142	Y	ZNF217	ZNF217	NA	NA	NA	NA	ZNF217	27991	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	52201463	52201802	52201714	Y	ZNF217	ZNF217	NA	NA	NA	NA	ZNF217	22644	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	52355086	52355238	52355182	Y	NA	NA	ZNF217,BCAS1	IMR90	Hi-C	24141950	ZNF217	130640	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr20	52391089	52391563	52391364	Y	NA	NA	ZNF217,BCAS1,SUMO1P1	IMR90	Hi-C	24141950	ZNF217	166643	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	52565886	52566139	52565988	Y	ZNF217	NA	NA	NA	NA	NA	PFDN4	256247	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	55362710	55362938	55362792	Y	AURKA,TFAP2C	NA	TFAP2C	MCF7	ChIA-PET	22265404	TFAP2C	160352	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr20	56293544	56293843	56293665	Y	NA	PMEPA1	NA	NA	NA	NA	PMEPA1	8952	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr20	56592800	56593208	56592856	Y	NA	NA	ZBP1,PMEPA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PPP4R1L	289287	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr20	57018014	57018479	57018179	Y	STX16	NA	NA	NA	NA	NA	VAPB	55836	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	57198784	57199334	57199089	Y	NA	STX16,STX16-NPEPL1	NA	NA	NA	NA	STX16	24994	CAGE	1C3IKEI	hg19	FANTOM5	5.51252224879638
chr20	60719468	60719634	60719593	Y	SS18L1,GTPBP5	LSM14B,PSMA7,SS18L1	NA	NA	NA	NA	SS18L1	2646	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	60924549	60924827	60924688	Y	TAF4,SS18L1,SLCO4A1,C20orf151,LAMA5	ADRM1,LAMA5,RPS21	NA	NA	NA	NA	LAMA5	15541	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	60933408	60933760	60933692	Y	NA	LAMA5,RPS21,CABLES2	ADRM1	K562	ChIA-PET	22265404	LAMA5	6608	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	60934143	60934390	60934309	Y	TAF4,PSMA7,SS18L1,RPS21,NTSR1,CABLES2,C20orf20,C20orf151,ADRM1,LAMA5	LAMA5,RPS21,CABLES2	ADRM1	K562	ChIA-PET	22265404	LAMA5	5978	CAGE	1C3IKEI	hg19	FANTOM5	10.4125420255043
chr20	60939635	60939778	60939673	Y	SLCO4A1,NTSR1,LAMA5	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	LAMA5	590	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr20	60940876	60941209	60940968	Y	PSMA7,SLCO4A1,RPS21,NTSR1,C20orf20,C20orf151,ADRM1,LAMA5	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	LAMA5	508	CAGE	1C3IKEI	hg19	FANTOM5	6.73752719297335
chr20	60956313	60956720	60956445	Y	NA	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	RPS21	3452	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	60956743	60957219	60956871	Y	NA	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	RPS21	2953	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	61076779	61077313	61077048	Y	DPH3P1,OGFR,DIDO1	NA	NA	NA	NA	NA	CABLES2	96438	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	61506279	61506510	61506352	Y	BHLHE23,TCFL5,DIDO1,C20orf11	TCFL5	TCFL5	MCF7,K562	ChIA-PET	22265404	TCFL5	15164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	62494990	62495823	62495679	Y	NA	ZBTB46,TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	TPD52L2	394	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr20	62527317	62528264	62527831	Y	PRIC285,PRIC285,GMEB2,ZGPAT,ZGPAT,LIME1,TPD52L2,RGS19,RGS19,OPRL1,DNAJC5	TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	DNAJC5	2799	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	62545436	62545544	62545492	Y	NA	DNAJC5,RNU1-134P,UCKL1	NA	NA	NA	NA	RNU1-134P	7128	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	62683158	62683348	62683288	Y	NA	ZNF512B,SOX18,TCEA2,RGS19	NA	NA	NA	NA	TCEA2	3969	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr20	62887659	62888425	62887862	Y	SAMD10,PCMTD2	PCMTD2	NA	NA	NA	NA	PCMTD2	2565	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	15442714	15442952	15442833	Y	NA	NA	NA	NA	NA	NA	RBM11	143499	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	16596629	16597038	16596898	Y	NRIP1	NA	NRIP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NRIP1	161308	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	17960667	17961305	17960883	Y	NA	NA	NA	NA	NA	NA	USP25	860323	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	19156522	19156877	19156578	Y	BTG3,C21orf91	C21orf91	NA	NA	NA	NA	C21orf91	32826	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	27370700	27370785	27370725	Y	NA	NA	NA	NA	NA	NA	APP	170661	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	28319364	28319698	28319531	Y	CYYR1	ADAMTS5	NA	NA	NA	NA	ADAMTS5	17134	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	29186148	29186441	29186404	Y	NA	NA	LINC00161	IMR90	Hi-C	24141950	ADAMTS5	849316	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	30374865	30375265	30375125	Y	C21orf7,N6AMT1,LTN1,USP16	LTN1,RPL23P2,RWDD2B,USP16	LTN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL23P2	6511	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr21	30684361	30684712	30684409	Y	NA	NA	NA	NA	NA	NA	BACH1	119969	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr21	32926891	32927175	32926925	Y	NA	TIAM1	NA	NA	NA	NA	TIAM1	3115	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	33870747	33870982	33870865	Y	NA	NA	NA	NA	NA	NA	C21orf119	107308	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	34755296	34756154	34755534	Y	IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2	IFNGR2	IFNGR2	MCF7	ChIA-PET	22265404	IFNGR2	17048	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	34773380	34773606	34773471	Y	OLIG2,OLIG1,IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2	IFNGR2	NA	NA	NA	NA	IFNGR2	178	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	35925582	35925949	35925790	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	59492	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	36143971	36144119	36144107	Y	NA	NA	NA	NA	NA	NA	RCAN1	158530	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	36179679	36180279	36179996	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	194238	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	36185927	36186112	36186038	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	200486	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	36208387	36209191	36208566	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	222946	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	36234553	36234896	36234857	Y	NA	NA	NA	NA	NA	NA	RCAN1	249112	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	38072912	38073314	38073050	Y	SIM2	SIM2	HLCS	IMR90	Hi-C	24141950	SIM2	3479	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	38074425	38074708	38074699	Y	NA	SIM2	HLCS	IMR90	Hi-C	24141950	SIM2	4992	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	38189032	38189251	38189142	Y	NA	NA	NA	NA	NA	NA	SIM2	119599	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	38935728	38936411	38936235	Y	TTC3,DYRK1A,DYRK1A	NA	DSCR3,DSCR9,DYRK1A,KCNJ6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DYRK1A	199636	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	43188787	43189188	43188843	Y	RIPK4	RIPK4	NA	NA	NA	NA	RIPK4	3521	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	44395482	44395891	44395810	Y	NA	PKNOX1	NA	NA	NA	NA	PKNOX1	2862	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	44395922	44396228	44396080	Y	WDR4,U2AF1,CBS	PKNOX1	NA	NA	NA	NA	PKNOX1	3302	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	44614192	44614410	44614235	Y	NA	NA	HSF2BP,LINC00313,SIK1	IMR90	Hi-C	24141950	U2AF1	88495	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	44753292	44753457	44753456	Y	NA	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	91551	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	44758836	44759116	44758976	Y	NA	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	85892	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	44760713	44760913	44760830	Y	NA	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	84095	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	44816664	44817004	44816885	Y	NA	SIK1	NA	NA	NA	NA	SIK1	28004	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr21	44914466	44914931	44914660	Y	PDXK,U2AF1,SIK1	NA	CRYAA,SIK1,HSF2BP,RRP1B,LINC00313	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	69458	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	44918002	44918401	44918083	Y	NA	NA	CRYAA,SIK1,HSF2BP,RRP1B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	72994	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	45020604	45020960	45020754	Y	NA	NA	NA	NA	NA	NA	HSF2BP	56414	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	45187861	45188442	45188176	Y	ICOSLG,PDXK,CSTB	CSTB,RRP1	NA	NA	NA	NA	CSTB	5884	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	45198694	45199238	45199184	Y	NA	CSTB,RRP1	NA	NA	NA	NA	CSTB	4368	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	45358133	45358224	45358178	Y	NA	NA	NA	NA	NA	NA	TRAPPC10	71976	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	45566076	45566451	45566257	Y	TRAPPC10,ICOSLG,C21orf2	PWP2,C21orf33	NA	NA	NA	NA	C21orf33	14589	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	45573018	45573302	45573138	Y	PDXK,CSTB,TRPM2,ICOSLG	PWP2,C21orf33	NA	NA	NA	NA	C21orf33	21531	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	45627966	45628150	45628090	Y	NA	ICOSLG	NA	NA	NA	NA	ICOSLG	30699	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	46737459	46737695	46737585	Y	COL18A1	POFUT2	COL18A1	MCF7	ChIA-PET	22265404	POFUT2	31646	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	46738832	46739011	46738964	Y	COL18A1	POFUT2	COL18A1	MCF7	ChIA-PET	22265404	POFUT2	33019	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	46783934	46784395	46784118	Y	NA	COL18A1	ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	COL18A1	38657	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr21	46832879	46833080	46832948	Y	NA	COL18A1	NA	NA	NA	NA	COL18A1	9827	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	46894520	46894647	46894596	Y	COL18A1	NA	SLC19A1	IMR90	Hi-C	24141950	SLC19A1	67678	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	47010467	47010705	47010586	Y	NA	SLC19A1	PCBP3,LOC100129027,SLC19A1,COL18A1,POFUT2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC19A1	48142	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	47167832	47168236	47167895	Y	NA	NA	PCBP3,LOC100129027	IMR90	Hi-C	24141950	PCBP3	106224	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	47312098	47312312	47312190	Y	SLC19A1,SLC19A1	NA	NA	NA	NA	NA	COL6A1	87339	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	47394030	47394545	47394409	Y	LSS,COL6A2,C21orf56,COL6A1	COL6A1	COL6A1	K562	ChIA-PET	22265404	COL6A1	5106	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr21	47394721	47394936	47394787	Y	NA	COL6A1	COL6A1	K562	ChIA-PET	22265404	COL6A1	4715	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	47395087	47395227	47395108	Y	COL6A2,COL6A1	COL6A1	COL6A1	K562	ChIA-PET	22265404	COL6A1	4424	CAGE	1C3IKEI	hg19	FANTOM5	4.90001977670789
chr21	47480637	47481027	47480832	Y	COL6A1,COL6A2	COL6A2	COL6A2,FTCD,C21orf56,MCM3AP-AS1,MCM3AP,COL6A1,LSS	IMR90	Hi-C	24141950	COL6A2	34984	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr21	47554885	47555152	47555043	Y	FTCD	COL6A2	NA	NA	NA	NA	COL6A2	38874	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	17652206	17652871	17652785	Y	NA	CECR5-AS1,CECR5,AC005300.5	NA	NA	NA	NA	CECR5	8029	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	18264435	18264847	18264620	Y	CECR2,ATP6V1E1,BCL2L13,USP18,BID,BID	BID	NA	NA	NA	NA	BID	8899	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	18404666	18404945	18404902	Y	NA	NA	NA	NA	NA	NA	MICAL3	100380	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	19159081	19159242	19159165	Y	NA	DGCR14,SLC25A1	NA	NA	NA	NA	SLC25A1	5101	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr22	20068627	20068902	20068750	Y	COMT,DGCR8	DGCR8,RANBP1,TRMT2A,ZDHHC8	NA	NA	NA	NA	DGCR8	2872	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	20287043	20287283	20287165	Y	NA	DGCR6L	NA	NA	NA	NA	DGCR6L	18320	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	22170870	22171333	22171102	Y	HIC2,PPM1F,MAPK1	MAPK1	NA	NA	NA	NA	MAPK1	48637	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	23624437	23624690	23624563	Y	BCR	NA	NA	NA	NA	NA	BCR	104546	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	24153288	24153648	24153392	Y	RGL4,LOC391322	CHCHD10,SMARCB1,SLC2A11	DERL3	IMR90	Hi-C	24141950	SMARCB1	26138	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	24255997	24256450	24256302	Y	C22orf43,CABIN1,CABIN1	MIF	NA	NA	NA	NA	MIF	21806	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	24639681	24640084	24639778	Y	GGT1	SPECC1L	NA	NA	NA	NA	SPECC1L	24702	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	24752898	24753006	24752951	Y	UPB1	NA	NA	NA	NA	NA	ADORA2A	58841	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	25348731	25349104	25348989	Y	NA	NA	SGSM1,KIAA1671,TMEM211	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM211B	361556	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	25349333	25349980	25349695	Y	NA	NA	SGSM1,KIAA1671,TMEM211	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM211B	362158	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	25354945	25355076	25355012	Y	NA	NA	KIAA1671,SGSM1,TMEM211	IMR90	Hi-C	24141950	FAM211B	367770	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	25381840	25382180	25381995	Y	NA	NA	KIAA1671	IMR90	Hi-C	24141950	FAM211B	394665	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	25463741	25463900	25463813	Y	NA	NA	NA	NA	NA	NA	LRP5L	335444	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	27054967	27055259	27055032	Y	SEZ6L,ASPHD2	CTA-211A9.5	NA	NA	NA	NA	CTA-211A9.5	11471	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	27501495	27502092	27501824	Y	NA	NA	PITPNB,MIAT	IMR90	Hi-C	24141950	RP5-1172A22.1	116596	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	27872779	27873029	27872871	Y	NA	NA	PITPNB,TTC28,TTC28-AS1,MN1,MIAT	IMR90	Hi-C	24141950	RP5-1172A22.1	254091	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	28122669	28123242	28122949	Y	PITPNB,MN1	NA	NA	NA	NA	NA	MN1	72244	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	28304832	28305219	28305193	Y	NA	TTC28-AS1,PITPNB	NA	NA	NA	NA	TTC28-AS1	8145	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	29132423	29132599	29132510	Y	NA	HSCB,CHEK2,CCDC117	NA	NA	NA	NA	HSCB	3420	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	30096148	30096264	30096206	Y	NA	NA	NA	NA	NA	NA	ZMAT5	64736	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	30279863	30280214	30279898	Y	NA	ASCC2,MTMR3	NA	NA	NA	NA	MTMR3	2719	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	30601535	30602099	30601994	Y	MTMR3,SLC35E4,SF3A1,DUSP18,CCDC157,OSM,LIF	LIF	HORMAD2,LIF,GATSL3	IMR90	Hi-C	24141950	LIF	38741	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	30620211	30620567	30620379	Y	NA	LIF	NA	NA	NA	NA	LIF	20273	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	30644816	30645407	30645321	Y	NA	LIF,GATSL3	NA	NA	NA	NA	LIF	3976	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr22	30646485	30646883	30646861	Y	SEC14L2,RNF215,LIF	LIF,GATSL3	NA	NA	NA	NA	LIF	5645	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	30648392	30648767	30648580	Y	SF3A1	LIF,GATSL3	NA	NA	NA	NA	LIF	7552	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	30649196	30649657	30649496	Y	MTMR3,TBC1D10A,SF3A1,DUSP18,LIF,OSM	LIF,GATSL3	NA	NA	NA	NA	LIF	8356	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr22	30651841	30652045	30651989	Y	RNF215	LIF,GATSL3	LIF	IMR90	Hi-C	24141950	LIF	11001	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr22	30653574	30654311	30654075	Y	RNF215,GAL3ST1	LIF,GATSL3	LIF	IMR90	Hi-C	24141950	LIF	12734	CAGE	1C3IKEI	hg19	FANTOM5	10.10629078946
chr22	31639861	31640267	31640177	Y	NA	LIMK2,PIK3IP1	NA	NA	NA	NA	LIMK2	33636	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	32806612	32806674	32806643	Y	RFPL2,RFPL3,TIMP3	NA	NA	NA	NA	NA	FBXO7	61989	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	35702518	35702966	35702671	Y	APOL6,TOM1,TOM1	TOM1	NA	NA	NA	NA	TOM1	9250	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	35708559	35708961	35708654	Y	APOL6,TOM1,TOM1,HMOX1	TOM1	NA	NA	NA	NA	TOM1	15291	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	35983528	35983815	35983759	Y	NA	RASD2	NA	NA	NA	NA	RASD2	48613	CAGE	1C3IKEI	hg19	FANTOM5	21.7438377591413
chr22	36149671	36149849	36149827	Y	NA	NA	APOL5	IMR90	Hi-C	24141950	APOL6	107229	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	36727482	36728450	36727733	Y	APOL3	NA	NA	NA	NA	NA	MYH9	53613	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	36728624	36729163	36728912	Y	IFT27	NA	NA	NA	NA	NA	MYH9	52900	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	36746983	36747265	36747123	Y	NA	MYH9	NA	NA	NA	NA	MYH9	34798	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	36753062	36753318	36753212	Y	APOL3,APOL3,APOL2,APOL2	MYH9	NA	NA	NA	NA	MYH9	28745	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	36765300	36765605	36765487	Y	APOL3,NCF4,MYH9	MYH9	NA	NA	NA	NA	MYH9	16458	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr22	36766615	36766810	36766723	Y	NCF4,MYH9	MYH9	NA	NA	NA	NA	MYH9	15253	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr22	37428831	37429188	37428927	Y	CARD10,TMPRSS6,TST,MPST	MPST,TST,KCTD17	KCTD17,TMPRSS6	IMR90	Hi-C	24141950	TST	15150	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	37624836	37624960	37624904	Y	SH3BP1,NOL12,MFNG,MFNG,GGA1,GGA1,NCF4,CSF2RB,IL2RB,RAC2,CYTH4	C1QTNF6,Z82188.1,RAC2	NA	NA	NA	NA	Z82188.1	4801	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	37638328	37638951	37638750	Y	SH3BP1,NOL12,MFNG,MFNG,LGALS2,GGA1,GGA1,NCF4,CSF2RB,RAC2,CYTH4	C1QTNF6,Z82188.1,CYTH4	NA	NA	NA	NA	RAC2	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	37703985	37704250	37704217	Y	SH3BP1,MFNG,MFNG,GGA1,GGA1,NCF4,CSF2RB,IL2RB,RAC2,CYTH4	CYTH4	NA	NA	NA	NA	CYTH4	27917	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	38143248	38143734	38143618	Y	LGALS1,TRIOBP,POLR2F	NA	NA	NA	NA	NA	TRIOBP	52237	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr22	38148564	38148886	38148725	Y	CDC42EP1	NA	NA	NA	NA	NA	H1F0	50228	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	38413617	38413853	38413758	Y	SOX10	PICK1	SOX10,POLR2F,PICK1,MAFF	IMR90	Hi-C	24141950	PICK1	36465	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	38614588	38614867	38614785	Y	MICALL1,TMEM184B,TMEM184B,CSNK1E,MAFF,MAFF	MAFF,PLA2G6	NA	NA	NA	NA	PLA2G6	14891	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	39462078	39462341	39462224	Y	NA	APOBEC3F,APOBEC3G,APOBEC3H	NA	NA	NA	NA	APOBEC3G	27154	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	39541576	39542088	39541730	Y	JOSD1,GTPBP1,SUN2,SUN2,APOBEC3G,CBX7	CBX7	NA	NA	NA	NA	CBX7	4591	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	39649567	39649736	39649595	Y	SUN2,APOBEC3A,PDGFB	PDGFB	CBX7,RNU86,RPL3,SNORD83A,PDGFB	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PDGFB	10811	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	39693596	39693744	39693670	Y	MGAT3	RPL3	NA	NA	NA	NA	RPL3	20650	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	39784774	39784929	39784841	Y	APOBEC3D,APOBEC3G,CBX7	SYNGR1,TAB1	NA	NA	NA	NA	TAB1	8817	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	39923809	39924011	39923907	Y	NA	ATF4,RPS19BP1	NA	NA	NA	NA	RPS19BP1	2849	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	40958851	40958976	40958969	Y	NA	NA	NA	NA	NA	NA	MKL1	71730	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	41048065	41048352	41048232	Y	EP300,MKL1	MKL1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17359	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	41418482	41418837	41418726	Y	MKL1,EP300	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	39219	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	41684313	41684541	41684479	Y	PPPDE2,RANGAP1	RANGAP1,ZC3H7B	NA	NA	NA	NA	RANGAP1	4058	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr22	41776948	41777130	41776981	Y	NA	TEF	NA	NA	NA	NA	TEF	15611	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	41809427	41810696	41809981	Y	CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF	TEF,TOB2	NA	NA	NA	NA	TOB2	30331	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr22	41839332	41839605	41839469	Y	TOB2	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	1422	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	41840300	41840792	41840564	Y	NA	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	235	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	42327988	42328313	42328152	Y	NA	SHISA8,CENPM,SEPT3	TNFRSF13C	MCF7	ChIA-PET	22265404	CENPM	12855	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	42835802	42836124	42835869	Y	POLDIP3,ARFGAP3,NFAM1	NA	MEI1,LOC100132273,TCF20,LOC388906,NFAM1	IMR90	Hi-C	24141950	Z83851.1	72560	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	43333511	43333722	43333661	Y	POLDIP3,ARFGAP3,PACSIN2,PACSIN2	NA	NA	NA	NA	NA	PACSIN2	75429	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	45944996	45945587	45945178	Y	NA	FBLN1	NA	NA	NA	NA	FBLN1	48878	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr22	46374166	46374684	46374539	Y	NA	NA	NA	NA	NA	NA	RP6-109B7.3	72901	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	46467914	46468476	46468052	Y	NA	RP6-109B7.3,C22orf26,MIR4763	NA	NA	NA	NA	C22orf26	19890	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	46472616	46472825	46472697	Y	NA	RP6-109B7.3,C22orf26,MIR4763	NA	NA	NA	NA	C22orf26	24592	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	46474643	46475112	46474791	Y	C22orf26	RP6-109B7.3,C22orf26,MIR4763	NA	NA	NA	NA	C22orf26	26619	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	46480881	46481264	46481017	Y	NA	RP6-109B7.3,C22orf26,MIR4763	NA	NA	NA	NA	MIR4763	26182	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	46483894	46484294	46483949	Y	C22orf26	RP6-109B7.3,C22orf26,MIR4763	NA	NA	NA	NA	MIR4763	23152	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	46924162	46924396	46924177	Y	NA	CELSR1,GRAMD4	NA	NA	NA	NA	CELSR1	6671	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	46934777	46935027	46934877	Y	NA	CELSR1,GRAMD4	NA	NA	NA	NA	CELSR1	3710	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	50248429	50248807	50248623	Y	TUBGCP6,TRABD,SELO,PIM3,MOV10L1,HDAC10,BRD1,ZBED4	BRD1,ZBED4	NA	NA	NA	NA	ZBED4	2939	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	50324610	50324932	50324739	Y	NA	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	14504	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	50329443	50330313	50330025	Y	TUBGCP6,TRABD,PIM3,PANX2,HDAC10,BRD1	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	19337	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	50364350	50364715	50364589	Y	NA	PIM3	NA	NA	NA	NA	PIM3	12189	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr22	50741799	50742849	50742615	Y	PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2	MAPK12,MAPK11,PLXNB2,PPP6R2	NA	NA	NA	NA	PLXNB2	1207	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr22	50743986	50744741	50744427	Y	PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2	MAPK12,MAPK11,PPP6R2	NA	NA	NA	NA	PLXNB2	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	3177157	3177268	3177188	Y	CRBN	TRNT1,CRBN	NA	NA	NA	NA	TRNT1	10557	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	4908577	4908896	4908639	Y	BHLHE40	AC018816.3	NA	NA	NA	NA	AC018816.3	18081	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	8781836	8782151	8782020	Y	NA	NA	NA	NA	NA	NA	RAD18	221306	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	8978841	8979048	8978945	Y	NA	RAD18	NA	NA	NA	NA	RAD18	24409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	9721492	9721576	9721535	Y	IL17RC,IL17RC,CIDEC,CIDEC	MTMR14,BRPF1	NA	NA	NA	NA	MTMR14	32375	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	10157932	10158133	10158106	Y	NA	BRK1,VHL,IRAK2	NA	NA	NA	NA	BRK1	2656	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	10233695	10234220	10233931	Y	VHL,IRAK2,TATDN2	IRAK2	NA	NA	NA	NA	IRAK2	29146	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	10402355	10402452	10402401	Y	FANCD2	SEC13	NA	NA	NA	NA	SEC13	41493	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	12234951	12235397	12235194	Y	RAF1,PPARG,PPARG	NA	NA	NA	NA	NA	PPARG	91470	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	12350153	12350305	12350183	Y	NA	PPARG	NA	NA	NA	NA	PPARG	23286	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	13325256	13325344	13325300	Y	NA	NA	NUP210,LOC285375	IMR90	Hi-C	24141950	NUP210	134465	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	13493281	13493606	13493395	Y	NA	NUP210,HDAC11	IQSEC1,NUP210	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HDAC11	25618	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	13936849	13937176	13936976	Y	NA	WNT7A	C3orf19,TMEM43,CHCHD4,XPC,LSM3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	WNT7A	17231	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	14167210	14167731	14167391	Y	TMEM43,XPC	CHCHD4,TMEM43	NA	NA	NA	NA	TMEM43	2770	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr3	15678965	15679290	15679049	Y	NA	BTD,HACL1	NA	NA	NA	NA	HACL1	37627	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	15780032	15780074	15780052	Y	SH3BP5,EAF1	NA	BTD	IMR90	Hi-C	24141950	ANKRD28	119204	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	15901875	15902313	15902310	Y	METTL6,ANKRD28	ANKRD28	NA	NA	NA	NA	ANKRD28	2597	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	16324333	16324353	16324342	Y	NA	DPH3,OXNAD1	NA	NA	NA	NA	OXNAD1	19627	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	16351640	16351656	16351648	Y	RFTN1,OXNAD1	DPH3,OXNAD1	NA	NA	NA	NA	OXNAD1	46934	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	16373323	16373612	16373405	Y	ANKRD28,OXNAD1	NA	NA	NA	NA	NA	OXNAD1	68617	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	17378312	17378639	17378476	Y	NA	NA	NA	NA	NA	NA	RFTN1	824779	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	18580242	18580387	18580280	Y	NA	RAD23BP1	NA	NA	NA	NA	RAD23BP1	2077	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	23641244	23641540	23641467	Y	NA	NA	NA	NA	NA	NA	UBE2E1	203854	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	23898490	23898770	23898565	Y	NA	NA	NKIRAS1,RPL15	IMR90	Hi-C	24141950	UBE2E1	53096	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	25790563	25790933	25790768	Y	NA	OXSM,NGLY1	NA	NA	NA	NA	OXSM	31475	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	25796078	25796406	25796226	Y	NGLY1	OXSM,NGLY1	NA	NA	NA	NA	OXSM	26002	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	27448460	27448581	27448568	Y	NA	NA	NEK10	IMR90	Hi-C	24141950	SLC4A7	75330	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	27719100	27719312	27719216	Y	NA	AC098614.2,EOMES	NEK10,SLC4A7	IMR90	Hi-C	24141950	EOMES	42894	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	29365730	29366225	29365913	Y	NA	RBMS3	NA	NA	NA	NA	RBMS3	45257	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	29983920	29984245	29984164	Y	NA	NA	NA	NA	NA	NA	TGFBR2	661749	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	31690891	31691368	31691073	Y	ZNF860,OSBPL10	NA	NA	NA	NA	NA	STT3B	118761	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	32526070	32526309	32526138	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	16591	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	33002804	33002999	33002866	Y	NA	NA	NA	NA	NA	NA	SEC13P1	70356	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	33837400	33837658	33837523	Y	CLASP2,PDCD6IP	PDCD6IP	NA	NA	NA	NA	PDCD6IP	186	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	37901883	37902306	37902042	Y	CTDSPL	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	432	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	39192381	39192719	39192586	Y	WDR48,CSRNP1	TTC21A,GORASP1,CSRNP1	NA	NA	NA	NA	CSRNP1	1334	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	42062353	42062651	42062504	Y	NA	TRAK1	TRAK1,ULK4	IMR90	Hi-C	24141950	TRAK1	9059	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	42220925	42221235	42221114	Y	TRAK1	NA	NA	NA	NA	NA	TRAK1	167631	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	42531634	42531985	42531932	Y	NA	RP11-219I21.1,VIPR1	NA	NA	NA	NA	VIPR1	2843	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	44040259	44040834	44040651	Y	NA	NA	ANO10	IMR90	Hi-C	24141950	ANO10	309173	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	44925504	44925895	44925674	Y	NA	TMEM42,MIR564	NA	NA	NA	NA	MIR564	24124	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	45138887	45139080	45139004	Y	NA	CDCP1	NA	NA	NA	NA	CDCP1	46834	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	45142532	45142787	45142664	Y	NA	CDCP1	NA	NA	NA	NA	CDCP1	43127	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	45146738	45147081	45147019	Y	TMEM158,CDCP1	CDCP1	NA	NA	NA	NA	CDCP1	38833	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	45147419	45147607	45147508	Y	TMEM158,CDCP1	CDCP1	NA	NA	NA	NA	CDCP1	38307	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	45157727	45158120	45157925	Y	CDCP1	CDCP1,RPS24P8	NA	NA	NA	NA	CDCP1	27794	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	45164613	45164770	45164669	Y	NA	CDCP1,RPS24P8	NA	NA	NA	NA	CDCP1	21144	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	47002825	47003246	47003204	Y	NA	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	15927	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	47078393	47078462	47078449	Y	NA	NA	NA	NA	NA	NA	CCDC12	56893	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	47420724	47420876	47420775	Y	NA	PTPN23	NA	NA	NA	NA	PTPN23	223	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	47704557	47705253	47705047	Y	SETD2	NA	NA	NA	NA	NA	CSPG5	84275	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	47879431	47879730	47879653	Y	SPINK8	DHX30	NA	NA	NA	NA	DHX30	37032	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	47991974	47992099	47992083	Y	CCDC51,ATRIP,SMARCC1,CDC25A	NA	NA	NA	NA	NA	MAP4	136670	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	48128782	48129302	48129029	Y	NA	MAP4	NA	NA	NA	NA	MAP4	13	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	48967045	48967316	48967140	Y	NA	SLC25A20,ARIH2	NA	NA	NA	NA	ARIH2	12791	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	49123301	49123671	49123633	Y	NA	QRICH1,QARS,USP19,LAMB2	NA	NA	NA	NA	QRICH1	6125	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	49696171	49696492	49696217	Y	NA	APEH,RNF123,MST1	APEH,MST1,RNF123	IMR90	Hi-C	24141950	APEH	12943	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	50354393	50354598	50354449	Y	MST1R	IFRD2,NAT6,HYAL3,HYAL2,TUSC2,RASSF1,CYB561D2,NPRL2,TMEM115	NA	NA	NA	NA	HYAL2	3739	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	50664800	50665228	50664999	Y	GNAI2,MAPKAPK3	MAPKAPK3,CISH,MIR4787,DOCK3	NA	NA	NA	NA	CISH	17538	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr3	52278175	52278351	52278252	Y	PBRM1,PBRM1,WDR82,GLYCTK,TWF2,PPM1M,PPM1M	ALAS1,RP5-1157M23.2,TWF2,PPM1M,GLYCTK,WDR82	NA	NA	NA	NA	PPM1M	334	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	52590623	52590962	52590793	Y	NA	NT5DC2	NA	NA	NA	NA	NT5DC2	23553	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	52652258	52652629	52652403	Y	GLYCTK,MUSTN1,GLT8D1	NA	NA	NA	NA	NA	GNL3	60543	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	53288705	53289353	53289077	Y	NA	TKT	NA	NA	NA	NA	TKT	637	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	55178043	55178603	55178498	Y	NA	NA	WNT5A,CACNA2D3	IMR90	Hi-C	24141950	CACNA2D3	1023469	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr3	56642253	56642384	56642319	Y	NA	NA	NA	NA	NA	NA	CCDC66	53064	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	56769464	56769764	56769614	Y	CCDC66	NA	NA	NA	NA	NA	FAM208A	54199	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	57562103	57562255	57562188	Y	SLMAP,FAM116A,APPL1,PDE12	PDE12,ARF4	NA	NA	NA	NA	ARF4	19692	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	57572232	57572342	57572306	Y	NA	PDE12,ARF4	NA	NA	NA	NA	ARF4	9605	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	57664290	57664400	57664342	Y	NA	NA	NA	NA	NA	NA	SLMAP	74777	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	57874517	57874643	57874579	Y	NA	NA	NA	NA	NA	NA	FLNB	117484	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	57960548	57960842	57960815	Y	FLNB	FLNB	ARF4,FLNB	IMR90	Hi-C	24141950	FLNB	31285	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	57963451	57963815	57963633	Y	NA	FLNB	ARF4,FLNB	IMR90	Hi-C	24141950	FLNB	28312	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	57969350	57969849	57969627	Y	PDE12,PXK	FLNB	ARF4,FLNB	IMR90	Hi-C	24141950	FLNB	22278	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	58029786	58030054	58029903	Y	NA	FLNB	NA	NA	NA	NA	FLNB	37659	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	58035006	58035314	58035102	Y	FLNB	FLNB	NA	NA	NA	NA	FLNB	42879	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	58038147	58038335	58038213	Y	FLNB	FLNB	NA	NA	NA	NA	FLNB	46020	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	58159699	58160034	58159862	Y	NA	NA	NA	NA	NA	NA	ABHD6	61199	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	58163548	58163776	58163593	Y	NA	NA	NA	NA	NA	NA	ABHD6	57457	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr3	61828479	61828865	61828501	Y	PTPRG	NA	NA	NA	NA	NA	RPL10AP6	101699	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	62926615	62926793	62926705	Y	CADPS	NA	NA	NA	NA	NA	PTPRG-AS1	573610	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	66491612	66491762	66491706	Y	NA	NA	NA	NA	NA	NA	LRIG1	57925	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	70898973	70899254	70899114	Y	NA	NA	NA	NA	NA	NA	FOXP1	731886	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	72388262	72388804	72388511	Y	RYBP	NA	SHQ1,GXYLT2,RYBP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RYBP	105265	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	72445751	72445968	72445860	Y	NA	RYBP	NA	NA	NA	NA	RYBP	48101	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	72977666	72978074	72977791	Y	RYBP	GXYLT2,FTH1P23	NA	NA	NA	NA	FTH1P23	1471	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	88151728	88152092	88151734	Y	NA	C3orf38,CGGBP1	NA	NA	NA	NA	C3orf38	44801	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	96336052	96336669	96336607	Y	NA	NA	NA	NA	NA	NA	EPHA6	194756	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr3	97200440	97200579	97200496	Y	EPHA6	NA	NA	NA	NA	NA	ARL6	280786	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	98504725	98505044	98504856	Y	OR5K4,ST3GAL6	NA	NA	NA	NA	NA	DCBLD2	113489	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	99584293	99584813	99584482	Y	NA	NA	NA	NA	NA	NA	TBC1D23	393031	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	99587238	99587483	99587373	Y	NA	NA	NA	NA	NA	NA	TBC1D23	390361	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	99600050	99600430	99600273	Y	FILIP1L,C3orf26	NA	NA	NA	NA	NA	TBC1D23	377414	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	99761045	99761306	99761215	Y	TMEM45A	NA	TMEM30C	IMR90	Hi-C	24141950	TBC1D23	216538	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	99909937	99910189	99910085	Y	NA	NA	NA	NA	NA	NA	TBC1D23	67655	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	100054250	100054545	100054496	Y	NA	NIT2	NA	NA	NA	NA	NIT2	2705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	103522825	103523125	103522973	Y	NA	NA	NA	NA	NA	NA	ALCAM	1560628	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	103861090	103861239	103861165	Y	NA	NA	NA	NA	NA	NA	ALCAM	1222514	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	105087492	105087848	105087688	Y	NA	ALCAM	NA	NA	NA	NA	ALCAM	3739	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	111721363	111721636	111721520	Y	NA	ABHD10	NA	NA	NA	NA	ABHD10	25506	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	112966345	112966604	112966475	Y	NA	BOC	NA	NA	NA	NA	BOC	38495	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	115545713	115545826	115545800	Y	NA	NA	NA	NA	NA	NA	PTMAP8	1197719	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	119071062	119071469	119071190	Y	ARHGAP31,COX17,ADPRH	NA	NA	NA	NA	NA	ARHGAP31	59842	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	123407272	123407514	123407399	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	104883	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	124419861	124420177	124419915	Y	KALRN	UMPS	NA	NA	NA	NA	UMPS	27036	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	124553626	124554125	124554004	Y	KALRN	NA	NA	NA	NA	NA	ITGB5	64140	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	124605050	124605342	124605178	Y	ITGB5	ITGB5	NA	NA	NA	NA	ITGB5	12923	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr3	126108107	126108472	126108304	Y	NA	NA	KLF15,CCDC37,ALDH1L1	IMR90	Hi-C	24141950	ZXDC	84290	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	126630341	126630598	126630469	Y	ZXDC	NA	NA	NA	NA	NA	CHCHD6	209278	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr3	126701397	126702091	126701497	Y	PLXNA1	NA	CHCHD6,PLXNA1	MCF7,K562	ChIA-PET	22265404	CHCHD6	280334	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr3	128312973	128313336	128313155	Y	NA	NA	EEFSEC,GATA2,LOC90246	IMR90	Hi-C	24141950	RPN1	84582	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	128745839	128746109	128746044	Y	NA	NA	NA	NA	NA	NA	RAB43	93535	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	128947996	128948470	128948199	Y	MBD4,KIAA1257,RAB43,RAB43,RAB43,RAB43,ISY1,CNBP	CNBP	KIAA1257,CCDC48,ISY1-RAB43,CNBP,COPG1,GP9,C3orf37	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CNBP	47231	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	128952340	128952748	128952739	Y	NA	NA	ISY1-RAB43,CNBP,CCDC48,GP9,KIAA1257,COPG1,C3orf37	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CNBP	51575	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	128957834	128958071	128957930	Y	NA	NA	KIAA1257,CCDC48,GP9,ISY1-RAB43,CNBP,COPG1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CNBP	57069	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	131854898	131855187	131855050	Y	NA	NA	CPNE4	IMR90	Hi-C	24141950	RPL7P16	105922	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	136153802	136154197	136154172	Y	NA	NA	NA	NA	NA	NA	PCCB	186654	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	141319185	141319480	141319327	Y	RASA2	NA	NA	NA	NA	NA	RASA2	115296	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	144134299	144134312	144134306	Y	NA	NA	NA	NA	NA	NA	C3orf58	445659	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	145785304	145785639	145785521	Y	NA	NA	NA	NA	NA	NA	PLOD2	93801	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	146955604	146955955	146955778	Y	NA	NA	NA	NA	NA	NA	PLSCR1	694953	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	148704982	148705163	148705084	Y	NA	GYG1	HLTF,GYG1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GYG1	1965	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	149104739	149105065	149104981	Y	COMMD2,TM4SF1	TM4SF1	GYG1,TM4SF18,TM4SF1,TM4SF4,WWTR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TM4SF1	11087	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	149297469	149297617	149297606	Y	NA	NA	NA	NA	NA	NA	RP11-278L15.6	87022	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	149330317	149330600	149330464	Y	WWTR1,WWTR1,WWTR1	NA	NA	NA	NA	NA	RP11-278L15.6	119870	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	149356424	149356747	149356622	Y	NA	NA	NA	NA	NA	NA	WWTR1	95754	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	149657313	149657850	149657694	Y	TSC22D2,RNF13	ANKUB1	NA	NA	NA	NA	ANKUB1	26322	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	149665014	149665210	149665089	Y	NA	ANKUB1	NA	NA	NA	NA	ANKUB1	18962	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	149666531	149666918	149666689	Y	NA	ANKUB1	NA	NA	NA	NA	ANKUB1	17254	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	151066126	151066377	151066226	Y	MED12L,GPR87,P2RY12	NA	NA	NA	NA	NA	MED12L	264642	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	151974707	151975007	151974858	Y	NA	MBNL1,MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	10337	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	152026905	152027295	152026911	Y	NA	MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	41561	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	152848416	152848799	152848521	Y	RAP2B	RAP2B	NA	NA	NA	NA	RAP2B	29230	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	156402848	156403019	156402937	Y	LEKR1,LEKR1,CCNL1,TIPARP,TIPARP,TIPARP	TIPARP,TIPARP-AS1	NA	NA	NA	NA	TIPARP-AS1	12681	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	156442773	156442811	156442792	Y	TIPARP,TIPARP,TIPARP	NA	NA	NA	NA	NA	TIPARP-AS1	52606	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	156453441	156453522	156453482	Y	CCNL1,TIPARP,TIPARP,TIPARP	NA	NA	NA	NA	NA	TIPARP-AS1	63274	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	156491591	156491826	156491709	Y	NA	PA2G4P4,LINC00886,LEKR1	NA	NA	NA	NA	PA2G4P4	34695	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	156852547	156853124	156852850	Y	NA	CCNL1,RP11-550I24.2	NA	NA	NA	NA	CCNL1	23425	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	158440805	158440990	158440882	Y	MFSD1	MFSD1	NA	NA	NA	NA	MFSD1	6997	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	159514645	159514911	159514780	Y	NA	NA	NA	NA	NA	NA	SMC4	600151	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	160195722	160195964	160195820	Y	NA	TRIM59,SCARNA7	NA	NA	NA	NA	TRIM59	5597	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	170966636	170966947	170966845	Y	NA	NA	NA	NA	NA	NA	TNIK	209250	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	171820468	171820770	171820540	Y	NA	NA	NA	NA	NA	NA	FNDC3B	65050	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	171859893	171860698	171860535	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	104475	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	171870963	171871593	171871291	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	115545	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	172038895	172038985	172038971	Y	FNDC3B	NA	NA	NA	NA	NA	FNDC3B	283477	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	172086059	172086253	172086084	Y	NA	NA	NA	NA	NA	NA	FNDC3B	330641	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	176776147	176776153	176776150	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	137108	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	177542015	177542147	177542058	Y	NA	NA	TBL1XR1	IMR90	Hi-C	24141950	TBL1XR1	628754	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	178231751	178231896	178231824	Y	NA	NA	KCNMB2	IMR90	Hi-C	24141950	ZMAT3	556171	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	178978348	178978737	178978528	Y	PIK3CA,MFN1,GNB4	LRRFIP1P1	NA	NA	NA	NA	LRRFIP1P1	1287	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr3	180040639	180040822	180040650	Y	NA	NA	PEX5L	IMR90	Hi-C	24141950	TTC14	277096	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	182645862	182646115	182645990	Y	MCF2L2,MCCC1	NA	NA	NA	NA	NA	DCUN1D1	55626	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	182973593	182973879	182973736	Y	ATP11B,KLHL6,KLHL24,B3GNT5	B3GNT5	NA	NA	NA	NA	B3GNT5	4561	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	183003579	183004143	183003750	Y	ATP11B,B3GNT5,KLHL6,KLHL24	B3GNT5	NA	NA	NA	NA	B3GNT5	34547	CAGE	1C3IKEI	hg19	FANTOM5	7.96253213715032
chr3	185374091	185374577	185374335	Y	NA	NA	NA	NA	NA	NA	C3orf65	53739	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	185450719	185450896	185450815	Y	NA	C3orf65	NA	NA	NA	NA	C3orf65	22403	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	185482318	185482647	185482554	Y	NA	NA	NA	NA	NA	NA	C3orf65	54002	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	185533882	185534105	185533994	Y	NA	IGF2BP2	SENP2	IMR90	Hi-C	24141950	IGF2BP2	6739	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	185825302	185825582	185825395	Y	NA	ETV5	NA	NA	NA	NA	ETV5	525	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr3	187529493	187529917	187529708	Y	RTP4,BCL6	NA	LPP,BCL6,LPP-AS2	IMR90	Hi-C	24141950	BCL6	67978	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	187904912	187905263	187905013	Y	BCL6,BCL6	LPP,LPP-AS2	NA	NA	NA	NA	LPP-AS2	35067	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	190062904	190063381	190063085	Y	LEPREL1,CLDN1,CLDN16	CLDN1	LEPREL1,CLDN1,CLDN16	IMR90	Hi-C	24141950	CLDN1	24640	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	193859199	193859624	193859359	Y	TMEM44	HES1	NA	NA	NA	NA	HES1	7265	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr3	193876735	193877026	193876899	Y	NA	HES1	NA	NA	NA	NA	HES1	24801	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	194210438	194211060	194210799	Y	HES1,ATP13A3	ATP13A3	NA	NA	NA	NA	ATP13A3	6033	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	194247870	194248550	194248205	Y	HES1,ATP13A3	ATP13A3	ATP13A3,GP5,TMEM44,FLJ34208	IMR90	Hi-C	24141950	ATP13A3	30777	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr3	194561866	194562021	194561957	Y	FAM43A	NA	LOC100507391,XXYLT1,ACAP2	IMR90	Hi-C	24141950	FAM43A	157244	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	195073897	195074088	195073990	Y	NA	NA	NA	NA	NA	NA	XXYLT1	84001	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	196377844	196378239	196377963	Y	NA	LINC01063,PIGX	NA	NA	NA	NA	PIGX	13198	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr3	196635737	196635948	196635847	Y	UBXN7,RNF168,CEP19,PIGX,PAK2,SENP5	SENP5,NCBP2	NA	NA	NA	NA	NCBP2	31520	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr3	197478210	197478491	197478305	Y	IQCG,KIAA0226,FYTTD1,FYTTD1,LRCH3	FYTTD1,KIAA0226,LRCH3	NA	NA	NA	NA	KIAA0226	3612	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	257243	257573	257339	Y	PDE6B	NA	NA	NA	NA	NA	ZNF876P	52844	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	683740	684022	683889	Y	GAK,MYL5,MFSD7,PCGF3	MYL5,ATP5I,PCGF3	NA	NA	NA	NA	PCGF3	13515	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	924714	925388	925028	Y	MAEA,KIAA1530,MFSD7,PCGF3,IDUA,GAK	GAK,TMEM175	NA	NA	NA	NA	TMEM175	539	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr4	1036795	1036974	1036954	Y	CRIPAK,SLC26A1	FGFRL1	NA	NA	NA	NA	FGFRL1	35071	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	1037465	1037841	1037534	Y	MAEA,KIAA1530,MFSD7,PCGF3,GAK,IDUA	FGFRL1	NA	NA	NA	NA	FGFRL1	35741	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	2414575	2415364	2414914	Y	HAUS3,TNIP2,TNIP2,SH3BP2,SH3BP2,SH3BP2,ZFYVE28,RNF4,RNF4,LOC402160	ZFYVE28,RNF4	NA	NA	NA	NA	ZFYVE28	3026	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	2574508	2574529	2574516	Y	NA	NA	POLN,MXD4,LOC402160,RNF4,FAM193A,TNIP2,ADD1	IMR90	Hi-C	24141950	RNF4	112561	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	2801486	2801785	2801636	Y	SH3BP2	TNIP2,SH3BP2,ADD1	NA	NA	NA	NA	SH3BP2	8736	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	3293872	3294174	3294028	Y	NA	RGS12	RGS12	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RGS12	1117	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	3323359	3323797	3323570	Y	NA	RGS12	NA	NA	NA	NA	RGS12	30604	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	4272259	4272533	4272507	Y	ZBTB49	TMEM128,LYAR,ZBTB49	NA	NA	NA	NA	LYAR	17363	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	7649791	7650390	7650086	Y	NA	NA	NA	NA	NA	NA	AFAP1	289263	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	7833117	7833393	7833178	Y	AFAP1	NA	NA	NA	NA	NA	AFAP1	106260	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	7834057	7834311	7834184	Y	AFAP1	NA	NA	NA	NA	NA	AFAP1	105342	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	7877911	7878253	7878055	Y	NA	NA	NA	NA	NA	NA	AFAP1	61400	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	7962509	7962775	7962724	Y	NA	AFAP1	NA	NA	NA	NA	AFAP1	22856	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	7969878	7969938	7969908	Y	SH3TC1	AFAP1	NA	NA	NA	NA	AFAP1	30225	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	8546577	8546699	8546638	Y	LOC650293,GPR78	NA	ACOX3,METTL19,GPR78,CPZ	IMR90	Hi-C	24141950	ACOX3	106127	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	9154755	9155069	9154900	Y	NA	FAM86KP	NA	NA	NA	NA	FAM86KP	1733	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	17829390	17829398	17829394	Y	CLRN2,NCAPG	DCAF16,NCAPG	NA	NA	NA	NA	NCAPG	18865	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	24660007	24660225	24660117	Y	NA	NA	CCDC149,MIR573	IMR90	Hi-C	24141950	DHX15	75834	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	26090058	26090547	26090383	Y	RBPJ,RBPJ	NA	RBPJ,TBC1D19	IMR90	Hi-C	24141950	RBPJ	72530	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	30718904	30719447	30718947	Y	PCDH7,PCDH7	PCDH7	NA	NA	NA	NA	PCDH7	590	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	30719661	30720023	30719741	Y	PCDH7,PCDH7	PCDH7	NA	NA	NA	NA	PCDH7	14	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	37581972	37582372	37582240	Y	NA	NA	NA	NA	NA	NA	RELL1	103626	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	38668617	38669179	38668850	Y	KLF3	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	4113	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	38697805	38697826	38697816	Y	NA	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	33301	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	38821118	38821520	38821242	Y	NA	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	TLR1,TLR6	34918	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	38859134	38859762	38859410	Y	KLF3,KLHL5,TLR1,TLR6	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	TLR1,TLR6	2696	CAGE	1C3IKEI	hg19	FANTOM5	6.73752719297335
chr4	41162074	41162440	41162321	Y	APBB2	NA	NA	NA	NA	NA	APBB2	54291	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	41880927	41881193	41881022	Y	PHOX2B	NA	PHOX2B,LIMCH1	IMR90	Hi-C	24141950	TMEM33	53944	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	41936193	41936441	41936268	Y	TMEM33	TMEM33	NA	NA	NA	NA	TMEM33	1056	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr4	53725752	53726074	53725904	Y	NA	NA	NA	NA	NA	NA	ERVMER34-1	109945	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	53985720	53986039	53985931	Y	NA	NA	NA	NA	NA	NA	SCFD2	244203	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	54825725	54826062	54825894	Y	GSX2	NA	RPL21P44,SCFD2,LNX1,FIP1L1,CHIC2,GSX2,PDGFRA	IMR90	Hi-C	24141950	CHIC2	102795	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	75409847	75410209	75409849	Y	NA	NA	EREG	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EREG	180987	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	75557908	75558335	75558035	Y	EREG,AREG	NA	EREG,MTHFD2L	IMR90	Hi-C	24141950	PARM1	297970	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	77674311	77674688	77674546	Y	SEPT11	NA	NA	NA	NA	NA	SEPT11	194168	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	77923148	77923272	77923214	Y	CCNI	NA	NA	NA	NA	NA	SEPT11	54292	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	81048415	81048773	81048660	Y	ANTXR2,PRDM8	ANTXR2	PAQR3,ANTXR2,PRDM8,FGF5	IMR90	Hi-C	24141950	ANTXR2	3807	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	84398625	84398990	84398638	Y	NA	HELQ,MRPS18C,FAM175A	NA	NA	NA	NA	MRPS18C	23540	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	84469544	84469879	84469660	Y	PLAC8,COQ2,HPSE,HPSE,HPSE,HELQ,AGPAT9	FAM175A,AGPAT9	NA	NA	NA	NA	AGPAT9	14477	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	85420434	85420908	85420714	Y	NA	NA	NA	NA	NA	NA	WDFY3-AS2	464630	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	87835479	87835856	87835675	Y	NA	AFF1,TECRP1	NA	NA	NA	NA	AFF1	18298	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	89454373	89454723	89454658	Y	NA	HERC3,PIGY	NA	NA	NA	NA	PIGY	13433	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	89747458	89747948	89747469	Y	NA	NA	NA	NA	NA	NA	NAP1L5	130072	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	99845137	99845196	99845164	Y	NA	AC019131.1,EIF4E	NA	NA	NA	NA	AC019131.1	3942	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	106064596	106064807	106064750	Y	NA	TET2	TET2	K562	ChIA-PET	22265404	TET2	225	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	113004366	113004696	113004523	Y	NA	NA	NA	NA	NA	NA	C4orf32	59857	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	114355245	114355627	114355568	Y	NA	RNU1-138P	NA	NA	NA	NA	RNU1-138P	15766	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr4	114382932	114383313	114383209	Y	NA	RNU1-138P	NA	NA	NA	NA	RNU1-138P	43453	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	119756174	119756657	119756269	Y	NA	SEC24D	NA	NA	NA	NA	SEC24D	1181	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	120432594	120432728	120432661	Y	PDE5A,PDE5A	NA	NA	NA	NA	NA	RP11-33B1.1	58648	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	121010657	121011025	121010845	Y	NA	RP11-679C8.2,MAD2L1	NDNF	IMR90	Hi-C	24141950	MAD2L1	24428	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	122609803	122610189	122610094	Y	ANXA5	ANXA5	NA	NA	NA	NA	ANXA5	6079	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	122610538	122611647	122611314	Y	ANXA5	ANXA5	NA	NA	NA	NA	ANXA5	4621	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	129244135	129244496	129244419	Y	NA	PGRMC2,RP11-420A23.1	PGRMC2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-420A23.1	32229	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	139067903	139068306	139067999	Y	NA	NA	NA	NA	NA	NA	SLC7A11	93197	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	139960222	139960706	139960403	Y	CCRN4L	CCRN4L	NA	NA	NA	NA	CCRN4L	25279	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	140035787	140036142	140035958	Y	NA	NA	NA	NA	NA	NA	ELF2	60230	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	140897225	140897350	140897279	Y	MAML3	NA	NA	NA	NA	NA	MAML3	175988	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	141020500	141020888	141020694	Y	NA	NA	NA	NA	NA	NA	MAML3	52450	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	144271294	144271615	144271412	Y	NA	GAB1	NA	NA	NA	NA	GAB1	15379	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	144277775	144277945	144277866	Y	NA	GAB1	NA	NA	NA	NA	GAB1	21860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	145956046	145956369	145956259	Y	NA	NA	NA	NA	NA	NA	ABCE1	60715	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	146729401	146729770	146729628	Y	NA	NA	NA	NA	NA	NA	ZNF827	128017	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	148374725	148374999	148374823	Y	TMEM184C	EDNRA	TMEM184C	IMR90	Hi-C	24141950	EDNRA	25070	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	149364278	149364693	149364534	Y	NR3C2	NR3C2	NA	NA	NA	NA	NR3C2	428	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	151564216	151564527	151564372	Y	NA	NA	NA	NA	NA	NA	LRBA	370352	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	152090134	152090652	152090546	Y	SH3D19	NA	NA	NA	NA	NA	RPS3A	71409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	153412522	153412921	153412842	Y	NA	MIR4453	NA	NA	NA	NA	MIR4453	42495	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	153717992	153718074	153718038	Y	NA	TIGD4,ARFIP1	NA	NA	NA	NA	ARFIP1	18903	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	157863056	157863372	157863345	Y	PDGFC	PDGFC	NA	NA	NA	NA	PDGFC	27174	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	160191202	160191310	160191258	Y	RAPGEF2	NA	NA	NA	NA	NA	FNIP2	502912	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	160195976	160196239	160196029	Y	RAPGEF2	NA	NA	NA	NA	NA	FNIP2	507686	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	170026437	170026753	170026620	Y	NA	NA	NA	NA	NA	NA	CBR4	97011	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	170096424	170096523	170096474	Y	NA	NA	NA	NA	NA	NA	SH3RF1	93733	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	173920202	173920438	173920320	Y	NA	NA	NA	NA	NA	NA	GALNT7	167466	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	177710943	177711419	177711262	Y	VEGFC	VEGFC	NA	NA	NA	NA	VEGFC	462	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	184208528	184208558	184208557	Y	NA	NA	NA	NA	NA	NA	CDKN2AIP	155186	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	185186820	185187542	185187472	Y	IRF2,CASP3	NA	IRF2,CASP3,LOC728175,CCDC111	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IRF2	206192	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	185304654	185305034	185304819	Y	ACSL1,IRF2	NA	NA	NA	NA	NA	IRF2	88700	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	185573558	185573933	185573744	Y	NA	CASP3	NA	NA	NA	NA	CASP3	4895	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	186495067	186495245	186495187	Y	NA	PDLIM3	NA	NA	NA	NA	PDLIM3	40301	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr4	187614690	187615080	187614853	Y	NA	FAT1	NA	NA	NA	NA	FAT1	30796	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr4	190942271	190942591	190942322	Y	NA	NA	NA	NA	NA	NA	FRG1	82328	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	53990	54174	54063	Y	PLEKHG4B,C5orf55	NA	LRRC14B,CCDC127,PLEKHG4B,SDHA	IMR90	Hi-C	24141950	CCDC127	162156	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr5	373695	374160	373984	Y	EXOC3	NA	NA	NA	NA	NA	C5orf55	67098	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr5	378611	379250	378849	Y	EXOC3	NA	NA	NA	NA	NA	C5orf55	62008	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	392668	393182	392808	Y	EXOC3	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	48076	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	399875	400445	400189	Y	EXOC3	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	40813	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	426647	427011	426980	Y	NA	C5orf55,EXOC3,CTD-2228K2.5	NA	NA	NA	NA	C5orf55	14247	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	672861	673336	673024	Y	NA	TPPP	NA	NA	NA	NA	TPPP	18174	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	784651	785023	784908	Y	ZDHHC11,TPPP	NA	NA	NA	NA	NA	TPPP	93141	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr5	1080709	1080898	1080802	Y	NA	SLC12A7	NA	NA	NA	NA	SLC12A7	29252	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	5376440	5376820	5376639	Y	NA	KIAA0947	NA	NA	NA	NA	KIAA0947	41957	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	6712873	6713977	6713364	Y	NA	NA	NA	NA	NA	NA	SRD5A1	81417	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr5	10743646	10743952	10743932	Y	NA	DAP	NA	NA	NA	NA	DAP	15432	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	14142803	14143164	14142969	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	992	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	14154284	14154671	14154327	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	12473	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	14185691	14186191	14185984	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	43880	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	14264855	14265210	14264930	Y	TRIO	NA	NA	NA	NA	NA	TRIO	123044	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	14268390	14268821	14268476	Y	NA	NA	NA	NA	NA	NA	TRIO	126579	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr5	14676546	14676758	14676685	Y	FAM105B	EEF1A1P13,FAM105B	NA	NA	NA	NA	FAM105B	13773	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	14937373	14937729	14937572	Y	FAM105A	NA	ANKH,FAM105B	IMR90	Hi-C	24141950	ANKH	67486	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	16715199	16715528	16715435	Y	NA	NA	NA	NA	NA	NA	FAM134B	100032	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	16735791	16735955	16735874	Y	NA	NA	NA	NA	NA	NA	FAM134B	120624	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	17224986	17225514	17225115	Y	BASP1	NA	NA	NA	NA	NA	RN7SKP133	118211	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	26847119	26847280	26847167	Y	NA	NA	NA	NA	NA	NA	RP11-549K20.1	1658354	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr5	29758752	29759069	29758903	Y	NA	NA	NA	NA	NA	NA	CDH6	1432788	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	33442170	33442454	33442303	Y	NA	CTD-2203K17.1,TARS	NA	NA	NA	NA	TARS	3368	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	34587608	34588326	34587915	Y	NA	NA	RAI14	IMR90	Hi-C	24141950	RAI14	66016	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	36174356	36174616	36174412	Y	SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	24265	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	37776965	37777327	37776998	Y	NA	NA	NA	NA	NA	NA	WDR70	399651	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	40405418	40405726	40405516	Y	PTGER4,CARD6	NA	NA	NA	NA	NA	PTGER4	271874	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	40688188	40688473	40688414	Y	PRKAA1,PTGER4	PTGER4	NA	NA	NA	NA	PTGER4	10588	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	42949793	42950117	42950048	Y	ZNF131,C5orf39	NA	LOC648987,LOC153684	IMR90	Hi-C	24141950	SEPP1	64299	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	42994649	42995346	42995172	Y	NA	AC025171.1	NA	NA	NA	NA	AC025171.1	44331	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	43034859	43034967	43034962	Y	NA	AC025171.1,ZNF131,CTD-2201E18.3	LOC648987	MCF7	ChIA-PET	22265404	AC025171.1	4710	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr5	45793437	45793825	45793631	Y	NA	NA	NA	NA	NA	NA	HCN1	99184	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	51211467	51211491	51211480	Y	NA	NA	NA	NA	NA	NA	ISL1	534546	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	52332019	52332357	52332083	Y	FST,ITGA2	ITGA2	NA	NA	NA	NA	ITGA2	48863	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	52333334	52333832	52333660	Y	NA	NA	NA	NA	NA	NA	ITGA2	50178	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	53317506	53317866	53317808	Y	NA	NA	NA	NA	NA	NA	ARL15	286546	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	54729958	54730125	54730050	Y	SKIV2L2,DDX4	NA	NA	NA	NA	NA	RNF138P1	94404	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	54897039	54897427	54897238	Y	IL6ST,PPAP2A	NA	NA	NA	NA	NA	PPAP2A	68161	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	55287334	55287994	55287973	Y	NA	IL6ST,CTD-2031P19.3	NA	NA	NA	NA	IL6ST	827	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	55288370	55289209	55288952	Y	IL6ST	NA	NA	NA	NA	NA	IL6ST,CTD-2031P19.3	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	58375824	58376057	58376052	Y	NA	NA	NA	NA	NA	NA	RAB3C	499776	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	58423311	58423752	58423511	Y	NA	NA	NA	NA	NA	NA	RAB3C	547263	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	58952543	58952885	58952791	Y	NA	NA	NA	NA	NA	NA	PDE4D	863062	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	59086263	59086677	59086406	Y	PDE4D	NA	NA	NA	NA	NA	PDE4D	729270	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	64331292	64332267	64331637	Y	NA	NA	NA	NA	NA	NA	CWC27	268535	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	64398874	64399506	64398924	Y	NA	NA	ADAMTS6,CWC27,PPWD1,CENPK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CWC27	336117	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	65220429	65221204	65220462	Y	NA	ERBB2IP	NA	NA	NA	NA	ERBB2IP	126	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	66145750	66145926	66145797	Y	NA	NA	CD180	IMR90	Hi-C	24141950	MAST4	255574	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	66505092	66505330	66505143	Y	NA	NA	MAST4,PIK3R1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAST4	614916	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	71404360	71404518	71404455	Y	MAP1B	MAP1B	NA	NA	NA	NA	MAP1B	3299	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	71462643	71462861	71462688	Y	NA	NA	NA	NA	NA	NA	MAP1B	61582	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	71505945	71506221	71506083	Y	NA	NA	NA	NA	NA	NA	MAP1B	104884	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	71800012	71800268	71800102	Y	ZNF366	NA	NA	NA	NA	NA	MRPS27	185539	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	72512311	72512636	72512493	Y	FOXD1	NA	FOXD1,FCHO2,TMEM171,BTF3	IMR90	Hi-C	24141950	TMEM171	98192	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	72934554	72934908	72934667	Y	RGNEF	NA	NA	NA	NA	NA	ANKRA2	75043	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	74861939	74862072	74862007	Y	NA	NA	NA	NA	NA	NA	COL4A3BP	55976	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	74862624	74863010	74862882	Y	ANKRD31,COL4A3BP,POLK,COL4A3BP,POC5	NA	NA	NA	NA	NA	COL4A3BP	56661	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	78411121	78411135	78411130	Y	NA	NA	NA	NA	NA	NA	DMGDH	118726	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	78993167	78993488	78993350	Y	THBS4,CMYA5	NA	NA	NA	NA	NA	PAPD4	87224	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	81653126	81653457	81653257	Y	RPS23	NA	ATP6AP1L,XRCC4,VCAN	IMR90	Hi-C	24141950	RPS23	80730	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	81655341	81655441	81655346	Y	NA	NA	VCAN,ATP6AP1L,XRCC4	IMR90	Hi-C	24141950	RPS23	82945	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	81702078	81702394	81702360	Y	NA	NA	VCAN	IMR90	Hi-C	24141950	RPS23	129682	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	82339174	82339396	82339285	Y	NA	XRCC4,TMEM167A	NA	NA	NA	NA	XRCC4	31921	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	82521420	82521438	82521429	Y	NA	NA	NA	NA	NA	NA	TMEM167A	149738	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	86417910	86418259	86418047	Y	NA	NA	MIR4280	K562	ChIA-PET	22265404	RASA1	143446	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	86619148	86619498	86619336	Y	NA	NA	NA	NA	NA	NA	RASA1	57443	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	92593669	92593984	92593827	Y	NA	NA	FLJ42709	IMR90	Hi-C	24141950	NR2F1	323059	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	95170754	95171173	95170855	Y	GLRX,ELL2	GLRX,AC008592.5	RHOBTB3,GLRX,ARSK,RFESD,SPATA9	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GLRX	14045	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	95483654	95483899	95483777	Y	NA	NA	ELL2	IMR90	Hi-C	24141950	ELL2	187879	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	98253335	98253735	98253703	Y	CHD1	CTD-2007H13.3	NA	NA	NA	NA	CTD-2007H13.3	9140	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	108137615	108137706	108137661	Y	NA	NA	NA	NA	NA	NA	FER	56092	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	112219334	112219897	112219506	Y	NA	SRP19,REEP5	NA	NA	NA	NA	SRP19	24415	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	112857514	112857856	112857617	Y	NA	MCC,YTHDC2	NA	NA	NA	NA	YTHDC2	10134	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	114750887	114751289	114751050	Y	NA	NA	FEM1C	IMR90	Hi-C	24141950	CCDC112	120359	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	114847596	114847935	114847760	Y	NA	FEM1C	NA	NA	NA	NA	FEM1C	30656	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	119016321	119016356	119016339	Y	NA	CTC-507E12.1	NA	NA	NA	NA	CTC-507E12.1	2429	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	122177778	122177931	122177816	Y	NA	SNX24	NA	NA	NA	NA	SNX24	644	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	122322384	122322589	122322416	Y	NA	PPIC	NA	NA	NA	NA	PPIC	47847	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	123987356	123987539	123987440	Y	ZNF608	NA	NA	NA	NA	NA	ZNF608	94961	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	126217588	126217612	126217598	Y	NA	NA	NA	NA	NA	NA	LMNB1	107273	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	126478879	126479210	126479043	Y	NA	NA	NA	NA	NA	NA	MARCH3	114379	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	126847905	126848122	126848004	Y	NA	PRRC1	PRRC1	K562,MCF7	ChIA-PET	22265404	PRRC1	3179	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	131430055	131430830	131430575	Y	RAPGEF6,FNIP1,SLC22A4,IRF1	CSF2	NA	NA	NA	NA	CSF2	22572	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	131595834	131595951	131595900	Y	KIF3A,PDLIM4	PDLIM4,SLC22A4,P4HA2	NA	NA	NA	NA	PDLIM4	4470	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	131629178	131629624	131629352	Y	FNIP1,IRF1,SLC22A4	PDLIM4,SLC22A4,P4HA2	NA	NA	NA	NA	P4HA2	170	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr5	132576270	132576709	132576388	Y	AFF4,ZCCHC10	NA	NA	NA	NA	NA	HSPA4	190616	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	133465161	133465539	133465291	Y	UBE2B,PHF15,CDKL3,TCF7,TCF7	TCF7,SKP1	NA	NA	NA	NA	TCF7	16759	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	133801466	133801754	133801589	Y	NA	NA	PHF15,SKP1,CDKN2AIPNL,UBE2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CDKN2AIPNL	55877	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	134259128	134259903	134259220	Y	NA	PCBD2,MTND6P4,MTND5P11,MTND4P12	NA	NA	NA	NA	MTND5P11	246	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr5	135352622	135352730	135352676	Y	NA	TGFBI	VTRNA2-1,TGFBI	IMR90	Hi-C	24141950	TGFBI	9854	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	137799770	137800154	137799916	Y	FAM13B,FAM53C,KDM3B,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	591	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	137800317	137800564	137800421	Y	FAM13B,FAM53C,KDM3B,ETF1,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	1138	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr5	138277949	138278244	138278038	Y	NA	NA	NA	NA	NA	NA	MATR3	329197	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	139017086	139017541	139017145	Y	CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	7343	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	139017934	139018665	139018227	Y	MZB1,CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	6219	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	139040519	139041115	139040855	Y	PAIP2	CXXC5	NA	NA	NA	NA	CXXC5	15635	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	139631101	139631601	139631302	Y	SRA1,SLC35A4,HBEGF,CD14,CD14,APBB3,ANKHD1	PFDN1	NA	NA	NA	NA	PFDN1	49105	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	140090601	140091006	140090806	Y	NA	WDR55,HARS2,HARS,ZMAT2,VTRNA1-3	NA	NA	NA	NA	VTRNA1-3	12737	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	141201064	141201327	141201197	Y	PCDH1	NA	PCDH1,LOC729080,FCHSD1,ARAP3,KIAA0141,PCDH12,RNF14	IMR90	Hi-C	24141950	PCDH1	55484	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	141311332	141311399	141311366	Y	NA	KIAA0141,RNF14	NA	NA	NA	NA	KIAA0141	9959	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	141404371	141404781	141404694	Y	DIAPH1,FCHSD1	GNPDA1	GNPDA1,NDFIP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GNPDA1	13765	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	141736379	141736797	141736670	Y	ARHGAP26	AC005592.2,SPRY4	NDFIP1,FGF1,SPRY4,GNPDA1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SPRY4	32359	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	141825669	141826086	141825870	Y	SPRY4	NA	NDFIP1,SPRY4,FGF1	IMR90	Hi-C	24141950	SPRY4	121649	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr5	142315332	142315934	142315386	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	167383	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	142339728	142340345	142340014	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	191779	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	142623562	142623962	142623719	Y	NA	NA	NA	NA	NA	NA	RPL7P21	86208	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	143300463	143300651	143300509	Y	NA	NA	ARHGAP26,NR3C1	IMR90	Hi-C	24141950	YIPF5	247627	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	144920892	144921143	144921082	Y	NA	NA	KCTD16	IMR90	Hi-C	24141950	PRELID2	291789	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	145498086	145498488	145498483	Y	NA	NA	NA	NA	NA	NA	LARS	61735	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	147580878	147580957	147580917	Y	JAKMIP2,FBXO38	NA	NA	NA	NA	NA	RP11-373N22.3	180389	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	148869266	148869383	148869317	Y	NA	NA	NA	NA	NA	NA	CSNK1A1	59624	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	149318595	149318961	149318771	Y	CSNK1A1,CD74,CD74,SLC26A2,HMGXB3	SLC26A2	NA	NA	NA	NA	SLC26A2	19339	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	149522462	149523132	149522666	Y	NA	NA	NA	NA	NA	NA	TIGD6	143732	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	149852669	149852742	149852704	Y	NA	RPS14,NDST1,CTC-367J11.1	SYNPO,MYOZ3,C5orf62,RPS14,NDST1,DCTN4,RBM22	IMR90	Hi-C	24141950	NDST1	10639	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	149945724	149945760	149945742	Y	SYNPO,ZNF300	SYNPO	NA	NA	NA	NA	SYNPO	32882	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	150086779	150087134	150086956	Y	RBM22,DCTN4,DCTN4	RBM22,DCTN4	MYOZ3,RBM22	IMR90	Hi-C	24141950	RBM22	8110	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	151119916	151120243	151119990	Y	NA	RP11-54C4.1,G3BP1,ATOX1	SPARC	IMR90	Hi-C	24141950	RP11-54C4.1	23696	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	151213355	151213633	151213423	Y	NA	NA	NA	NA	NA	NA	ATOX1	63262	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	152494885	152495216	152495051	Y	NA	NA	NA	NA	NA	NA	MFAP3	921250	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	154871450	154872048	154871744	Y	KIF4B	NA	NA	NA	NA	NA	MRPL22	552820	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	156623203	156623385	156623294	Y	CYFIP2,CYFIP2,ITK	NA	NA	NA	NA	NA	HAVCR2	55323	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	158876999	158877252	158877089	Y	NA	NA	NA	NA	NA	NA	UBLCP1	188910	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	159837617	159837836	159837727	Y	NA	C5orf54,SLU7,PTTG1	NA	NA	NA	NA	SLU7	8882	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	167126470	167126930	167126675	Y	NA	NA	NA	NA	NA	NA	WWC1	589726	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	167961977	167962275	167962126	Y	NA	FBLL1,PANK3	PANK3,MIR103B1	IMR90	Hi-C	24141950	FBLL1	7856	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	169398141	169398453	169398335	Y	NA	FAM196B	NA	NA	NA	NA	FAM196B	7291	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	169754818	169755156	169755019	Y	LCP2,KCNMB1	NA	KCNIP1,LCP2,LOC257358	IMR90	Hi-C	24141950	FAM196B	349074	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	170662332	170662346	170662338	Y	NA	NA	NA	NA	NA	NA	NPM1	149774	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	171298269	171298393	171298371	Y	NA	NA	NA	NA	NA	NA	FBXW11	133484	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	171326428	171326478	171326475	Y	NA	NA	NA	NA	NA	NA	FBXW11	105399	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	171431879	171432256	171432181	Y	UBTD2,STK10	FBXW11	NA	NA	NA	NA	FBXW11	2	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	171498342	171498743	171498483	Y	NA	NA	NA	NA	NA	NA	FBXW11	66465	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	171602273	171602685	171602548	Y	STK10	STK10	NA	NA	NA	NA	STK10	10705	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr5	172160417	172160946	172160788	Y	ATP6V0E1	DUSP1	ERGIC1,ATP6V0E1,C5orf41,DUSP1,NEURL1B,BNIP1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DUSP1	35252	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	172205264	172205447	172205353	Y	UBTD2,C5orf41,DUSP1	DUSP1	DUSP1,ERGIC1,LOC100268168,ATP6V0E1,RPL26L1	IMR90	Hi-C	24141950	DUSP1	9066	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	172327024	172327318	172327167	Y	NA	NA	NA	NA	NA	NA	RPL26L1	56414	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	173193377	173193650	173193560	Y	NA	NA	CPEB4	IMR90	Hi-C	24141950	CPEB4	119633	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr5	173237626	173237876	173237751	Y	NA	NA	BOD1	IMR90	Hi-C	24141950	CPEB4	75407	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	173586705	173586920	173586830	Y	NA	NA	NA	NA	NA	NA	CPEB4	273422	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	173909800	173909986	173909867	Y	NA	NA	MIR4634,MSX2	IMR90	Hi-C	24141950	MSX2	239550	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	176422952	176423155	176423071	Y	HK3,UIMC1,UIMC1,UIMC1,RAB24,GRK6	UIMC1,ZNF346	NA	NA	NA	NA	UIMC1	24479	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	177042588	177043196	177042926	Y	NSD1,FAM193B	TMED9,B4GALT7	NA	NA	NA	NA	B4GALT7	17487	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	177645267	177645446	177645363	Y	N4BP3,CLK4,AGXT2L2	HNRNPAB	NA	NA	NA	NA	HNRNPAB	15759	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	177645477	177646261	177645593	Y	NA	HNRNPAB	NA	NA	NA	NA	HNRNPAB	15969	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	178698075	178698460	178698284	Y	NA	NA	NA	NA	NA	NA	ADAMTS2	71971	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	179453285	179453637	179453562	Y	RUFY1,HNRNPH1,MAML1,SQSTM1,RNF130	RNF130	NA	NA	NA	NA	RNF130	43481	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	180615864	180616079	180615972	Y	NA	CTC-338M12.5,TRIM7,TRIM41,MIR4638	NA	NA	NA	NA	CTC-338M12.5	845	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr5	180616521	180617006	180616799	Y	ZFP62,TRIM52,TRIM41	TRIM7,TRIM41,MIR4638	NA	NA	NA	NA	CTC-338M12.5	0	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr5	180634441	180634803	180634658	Y	NA	CTC-338M12.5,TRIM7,TRIM41,MIR4638,CTC-338M12.4,GNB2L1	NA	NA	NA	NA	TRIM7	4148	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	711154	711526	711478	Y	DUSP22,EXOC2	EXOC2	NA	NA	NA	NA	EXOC2	20037	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	2853307	2853467	2853442	Y	SERPINB9,RIPK1,NQO2,SERPINB1	SERPINB1	NA	NA	NA	NA	SERPINB1	13067	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	2874865	2875144	2874975	Y	SERPINB9,RIPK1,NQO2,SERPINB1	SERPINB1	NA	NA	NA	NA	SERPINB1	34625	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	3259939	3260435	3260206	Y	NA	PSMG4	NA	NA	NA	NA	PSMG4	30302	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	5157743	5158129	5157936	Y	NA	NA	NA	NA	NA	NA	LYRM4	101043	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	6687140	6687567	6687361	Y	NA	NA	RREB1,SSR1,SNRNP48	IMR90	Hi-C	24141950	F13A1	367894	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	7058764	7058925	7058840	Y	DSP	RREB1	RREB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RREB1	46905	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	7526939	7527338	7526953	Y	NA	DSP	CAGE1,RIOK1,DSP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DSP	12470	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	9645896	9646138	9645974	Y	NA	NA	NA	NA	NA	NA	TFAP2A	771754	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	10441526	10441791	10441655	Y	TMEM14C,TMEM14B,PAK1IP1,GCNT2,TFAP2A,TFAP2A,TFAP2A	TFAP2A,GCNT2	NA	NA	NA	NA	TFAP2A	23634	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	10970926	10971179	10971053	Y	NA	NA	NA	NA	NA	NA	SYCP2L	224899	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	12113688	12114092	12113700	Y	NA	NA	NA	NA	NA	NA	HIVEP1	106693	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	12472967	12473281	12473124	Y	NA	NA	NA	NA	NA	NA	EDN1	184371	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	13391107	13391478	13391293	Y	NA	NA	NA	NA	NA	NA	TBC1D7	64292	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	16244335	16244343	16244339	Y	NA	GMPR	NA	NA	NA	NA	GMPR	7524	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	16422379	16422759	16422608	Y	NA	NA	NA	NA	NA	NA	GMPR	185568	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	16439523	16439703	16439580	Y	MYLIP,ATXN1	NA	NA	NA	NA	NA	GMPR	202712	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	16669504	16669854	16669679	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	89515	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	16684658	16685097	16684682	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	74272	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	16699529	16700051	16699938	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	59318	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	17715315	17715544	17715493	Y	NUP153	NUP153	NUP153,KIF13A	IMR90	Hi-C	24141950	NUP153	10659	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	21098770	21098791	21098780	Y	NA	NA	NA	NA	NA	NA	SOX4	493181	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	24228927	24229160	24229097	Y	NA	NA	NA	NA	NA	NA	MRS2	171993	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	24686171	24686408	24686290	Y	DCDC2	KIAA0319,TDP2,ACOT13,C6orf62	NA	NA	NA	NA	ACOT13	20908	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	25992254	25993073	25992840	Y	NA	TRIM38,HIST1H3A,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2	NA	NA	NA	NA	HIST1H3A	25645	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr6	27145585	27145720	27145705	Y	FKSG83,ZNF184,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH	HIST1H2BJ,HIST1H2AG,HIST1H2BK,HIST1H2AH	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HIST1H2AH	32724	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	27300679	27301026	27300902	Y	NA	ZNF204P,ZNF391	NA	NA	NA	NA	ZNF204P	36278	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr6	27513313	27513537	27513433	Y	NA	NA	HIST1H2AH,HIST1H2BK,MIR3143,HIST1H2AM,HIST1H3J,HIST1H2BO	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF184	74416	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	27655687	27656083	27655918	Y	NA	NA	LOC100507173	MCF7,K562	ChIA-PET	22265404	HIST1H2BL	117626	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	27706104	27706357	27706299	Y	NA	NA	NA	NA	NA	NA	HIST1H2BL	67352	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	28102608	28102781	28102677	Y	ZSCAN16	ZSCAN16,ZNF192P1	NA	NA	NA	NA	ZSCAN16	12270	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	28180543	28180884	28180590	Y	NA	ZKSCAN4	NA	NA	NA	NA	ZKSCAN4	44127	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	28457225	28458028	28457315	Y	NA	ZSCAN23	NA	NA	NA	NA	ZSCAN23	47946	CAGE	1C3IKEI	hg19	FANTOM5	3.36876359648668
chr6	28601930	28602271	28602104	Y	NA	SCAND3	NA	NA	NA	NA	SCAND3	19941	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	28710805	28711035	28710922	Y	NA	NA	NA	NA	NA	NA	XXbac-BPG308K3.5	93748	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	30716597	30717062	30716912	Y	IER3	MDC1,TUBB,FLOT1,IER3	PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1	IMR90	Hi-C	24141950	IER3	6266	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	31789672	31790268	31789876	Y	NA	VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48	NA	NA	NA	NA	HSPA1B	3244	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr6	31942054	31942322	31942254	Y	NA	SKIV2L,STK19	NA	NA	NA	NA	STK19	5186	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	32956037	32956271	32956088	Y	NA	BRD2,HLA-DMA,BRD2-IT1	NA	NA	NA	NA	BRD2-IT1	20028	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	33018722	33018782	33018752	Y	HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,HLA-DPB1,HLA-DPA1,HLA-DOA	HLA-DPA1	NA	NA	NA	NA	HLA-DPA1	27770	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	33392796	33393285	33393082	Y	SYNGAP1	KIFC1,PHF1,CUTA,ZBTB9	NA	NA	NA	NA	CUTA	8702	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	33581625	33581918	33581825	Y	NA	BAK1,ITPR3	NA	NA	NA	NA	ITPR3	4224	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	33590898	33591125	33590902	Y	ITPR3	BAK1,ITPR3	NA	NA	NA	NA	ITPR3	4756	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	34191726	34192136	34191830	Y	C6orf1,HMGA1	CYCSP55,HMGA1,C6orf1,RPL35P2	RPS10-NUDT3,NUDT3,C6orf1	MCF7	ChIA-PET	22265404	CYCSP55	6510	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	34631608	34631780	34631736	Y	HMGA1	C6orf106	NA	NA	NA	NA	C6orf106	30856	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	35185451	35185811	35185631	Y	NA	ZNF76	NA	NA	NA	NA	ZNF76	38875	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	37093441	37093739	37093580	Y	NA	PIM1	PIM1,PPIL1,FGD2,C6orf89,TMEM217,CPNE5,MTCH1,TBC1D22B,CDKN1A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	42240	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	37104908	37105418	37105405	Y	NA	PIM1	PIM1,CPNE5,TMEM217,PPIL1,C6orf89,FGD2,TBC1D22B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	30561	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	37523438	37523883	37523533	Y	NA	NA	NA	NA	NA	NA	CCDC167	57740	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	40463742	40464103	40464095	Y	NA	NA	NA	NA	NA	NA	RP1-278E11.3	539170	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	42372266	42372455	42372353	Y	NA	TRERF1	NA	NA	NA	NA	TRERF1	45334	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	42515407	42515543	42515467	Y	NA	UBR2	TRERF1,GUCA1A,TAF8,GUCA1B,CCND3,C6orf132,MRPS10,UBR2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UBR2	14257	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	43878497	43878687	43878563	Y	GTPBP2,MRPS18A	NA	NA	NA	NA	NA	C6orf223	87630	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	43978439	43978901	43978686	Y	NFKBIE	C6orf223	NA	NA	NA	NA	C6orf223	12122	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	44002049	44002379	44002368	Y	NFKBIE,GTPBP2	C6orf223	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	C6orf223	35732	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	44011946	44012485	44012109	Y	NA	C6orf223	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	C6orf223	45629	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	44396303	44396427	44396307	Y	NA	CDC5L	NA	NA	NA	NA	CDC5L	43041	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	45301191	45301441	45301316	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	42249	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	45390987	45391259	45391097	Y	RUNX2	SUPT3H	NA	NA	NA	NA	SUPT3H	47297	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	45392235	45392572	45392528	Y	RUNX2	SUPT3H	NA	NA	NA	NA	SUPT3H	48545	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	52217307	52217701	52217502	Y	NA	PAQR8	PAQR8,MCM3,EFHC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PAQR8	6518	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	53224045	53224723	53224315	Y	NA	ELOVL5	ELOVL5	K562	ChIA-PET	22265404	ELOVL5	12098	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	53678166	53678361	53678262	Y	NA	LRRC1	NA	NA	NA	NA	LRRC1	20871	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	56811664	56812033	56811848	Y	NA	DST	BEND6,KIAA1586,ZNF451,PRIM2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	DST	5393	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	58777244	58778438	58777771	Y	NA	NA	NA	NA	NA	NA	GUSBP4	522675	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	64151294	64151779	64151706	Y	NA	NA	NA	NA	NA	NA	PTP4A1	77887	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	65390704	65390953	65390803	Y	NA	NA	NA	NA	NA	NA	RP11-59D5__B.2	875975	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	72010402	72010735	72010435	Y	NA	OGFRL1	NA	NA	NA	NA	OGFRL1	13896	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	74289769	74290568	74290415	Y	MB21D1,SLC17A5,CD109,CD109,EEF1A1	NA	NA	NA	NA	NA	EEF1A1	58249	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	75325664	75325910	75325787	Y	NA	NA	CD109,COL12A1	IMR90	Hi-C	24141950	COL12A1	587857	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	83521076	83521456	83521266	Y	NA	NA	NA	NA	NA	NA	DOPEY1	253929	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	83893224	83893469	83893362	Y	RWDD2A,PGM3,PGM3	RWDD2A,PGM3	NA	NA	NA	NA	RWDD2A	7629	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	86113432	86113601	86113525	Y	NT5E	NT5E	NT5E,SNX14	IMR90	Hi-C	24141950	NT5E	44208	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	86114496	86114829	86114663	Y	NT5E	NT5E	NT5E,SNX14	IMR90	Hi-C	24141950	NT5E	42980	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr6	86174491	86174911	86174693	Y	NA	NT5E	NA	NA	NA	NA	NT5E	16682	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	88401154	88401337	88401278	Y	NA	AKIRIN2	NA	NA	NA	NA	AKIRIN2	8590	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	89315918	89316052	89315985	Y	NA	NA	NA	NA	NA	NA	ACTBP8	331210	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	89796215	89796534	89796231	Y	NA	PNRC1	NA	NA	NA	NA	PNRC1	7745	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	93802046	93802077	93802062	Y	NA	NA	NA	NA	NA	NA	EPHA7	325188	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	100007525	100007878	100007702	Y	LOC100130890	USP45,CCNC,PRDM13	NA	NA	NA	NA	CCNC	6971	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	101149750	101149957	101149936	Y	NA	NA	NA	NA	NA	NA	RP1-121G13.3	173598	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	106049296	106049799	106049571	Y	PRDM1	NA	PRDM1,ATG5	IMR90	Hi-C	24141950	PREP	200337	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	106616078	106616322	106616199	Y	NA	NA	NA	NA	NA	NA	ATG5	155344	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	108455044	108455377	108455332	Y	NA	OSTM1	LACE1,ARMC2,NR2E1	IMR90	Hi-C	24141950	OSTM1	29681	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	108486129	108486518	108486197	Y	NA	OSTM1	NA	NA	NA	NA	OSTM1	1071	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	108879521	108879931	108879808	Y	SESN1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	483	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	108883670	108884545	108884024	Y	OSTM1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	4632	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr6	108895400	108895781	108895496	Y	NA	FOXO3	NA	NA	NA	NA	FOXO3	16362	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	109852596	109852917	109852757	Y	NA	NA	NA	NA	NA	NA	ZBTB24	50156	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	111666861	111666999	111666959	Y	REV3L,FYN	NA	NA	NA	NA	NA	KIAA1919	88310	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	114056297	114056582	114056455	Y	MARCKS	NA	MARCKS	IMR90	Hi-C	24141950	MARCKS	119959	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	121530032	121530291	121530288	Y	NA	NA	NA	NA	NA	NA	GJA1	224547	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	126241150	126241321	126241235	Y	NCOA7	HINT3	NA	NA	NA	NA	HINT3	34606	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	127778453	127778833	127778741	Y	NA	RP3-403A15.1	NA	NA	NA	NA	RP3-403A15.1	23672	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	127892310	127892704	127892511	Y	NA	NA	NA	NA	NA	NA	RP3-403A15.1	137529	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	128617083	128617221	128617152	Y	NA	NA	NA	NA	NA	NA	PTPRK	222649	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	128830157	128830356	128830243	Y	NA	PTPRK	NA	NA	NA	NA	PTPRK	9514	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	129855341	129855708	129855581	Y	ARHGAP18	NA	NA	NA	NA	NA	ARHGAP18	173662	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	129994496	129994751	129994657	Y	ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	34619	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	133070302	133070479	133070392	Y	STX7,VNN2,VNN2,VNN2	NA	NA	NA	NA	NA	RPS12	63101	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	133890779	133890909	133890844	Y	NA	NA	MGC34034,TBPL1,SLC2A12,TCF21	IMR90	Hi-C	24141950	EYA4	331043	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	135344059	135344242	135344151	Y	NA	NA	NA	NA	NA	NA	HBS1L	77952	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	136278220	136278515	136278405	Y	NA	NA	NA	NA	NA	NA	PDE7B	107386	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	136316549	136316741	136316613	Y	NA	NA	NA	NA	NA	NA	PDE7B	145715	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	137242009	137242335	137242164	Y	IL20RA,SLC35D3	NA	NA	NA	NA	NA	PEX7	100292	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	138890859	138891324	138891176	Y	PBOV1,NHSL1	NA	NA	NA	NA	NA	HEBP2	168191	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	138914342	138914559	138914540	Y	NA	NA	HEBP2,NHSL1,LOC100507462,PERP,CCDC28A,ECT2L,FLJ46906	IMR90	Hi-C	24141950	CCDC28A	178098	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	139350632	139351255	139350885	Y	NA	REPS1	NA	NA	NA	NA	REPS1	43234	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	143123144	143123510	143123441	Y	NA	NA	NA	NA	NA	NA	HIVEP2	140828	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	143206296	143206927	143206703	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	57411	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr6	143221710	143222285	143222093	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	42053	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	143281299	143281549	143281510	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	16961	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	143770817	143770943	143770879	Y	ADAT2	ADAT2,PEX3	NA	NA	NA	NA	PEX3	873	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	144279957	144280354	144280096	Y	NA	NA	NA	NA	NA	NA	PLAGL1	103381	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	144283965	144283971	144283968	Y	NA	NA	NA	NA	NA	NA	PLAGL1	99764	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	144931961	144932452	144932213	Y	NA	NA	NA	NA	NA	NA	UTRN	327124	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	148688472	148688811	148688673	Y	SASH1	NA	NA	NA	NA	NA	SASH1	97032	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	151325792	151326084	151325926	Y	NA	NA	NA	NA	NA	NA	RP1-292B18.1	92581	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	151647622	151647708	151647665	Y	NA	NA	ZBTB2	IMR90	Hi-C	24141950	ZBTB2	62975	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	151701197	151701769	151701451	Y	C6orf97,ZBTB2	ZBTB2	NA	NA	NA	NA	ZBTB2	8914	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	151730569	151730753	151730690	Y	NA	ZBTB2,RMND1,C6orf211	NA	NA	NA	NA	ZBTB2	19886	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	152606341	152606739	152606594	Y	NA	NA	NA	NA	NA	NA	SYNE1	350197	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	154753926	154754309	154754118	Y	CNKSR3	NA	NA	NA	NA	NA	CNKSR3	75484	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	155181312	155181660	155181451	Y	TIAM2,TIAM2	TIAM2	TIAM2	IMR90	Hi-C	24141950	TIAM2	29481	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	157542479	157542718	157542566	Y	NA	NA	NA	NA	NA	NA	TMEM242	199915	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	158254729	158255396	158255020	Y	NA	SNX9	NA	NA	NA	NA	SNX9	12433	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	158478416	158478907	158478642	Y	NA	NA	NA	NA	NA	NA	SYNJ2	77528	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr6	158981403	158981866	158981661	Y	NA	NA	NA	NA	NA	NA	DYNLT1	81905	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr6	158982051	158982465	158982168	Y	NA	NA	NA	NA	NA	NA	DYNLT1	81306	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	168408262	168408655	168408498	Y	NA	NA	SMOC2,KIF25	IMR90	Hi-C	24141950	MLLT4	182660	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	169314330	169314429	169314380	Y	NA	NA	WDR27,LINC00574,PHF10,C6orf70,PSMB1,SMOC2,LINC00242	IMR90	Hi-C	24141950	RP11-417E7.1	246590	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	169497404	169497715	169497550	Y	THBS2	NA	PHF10,THBS2,WDR27,C6orf70	IMR90	Hi-C	24141950	RP11-417E7.1	63304	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	170054470	170055295	170054892	Y	TCTE3	WDR27,C6orf120	NA	NA	NA	NA	WDR27	44864	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr6	170654095	170654292	170654195	Y	FAM120B	NA	NA	NA	NA	NA	FAM120B	56304	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	1572262	1572844	1572636	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	3912	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr7	1573524	1573718	1573598	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	5174	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr7	2306623	2306831	2306646	Y	MAD1L1	MAD1L1,FTSJ2,NUDT1	NA	NA	NA	NA	NUDT1	26766	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	2657383	2657705	2657445	Y	IQCE,TTYH3	TTYH3	NA	NA	NA	NA	TTYH3	11880	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	2903227	2903785	2903462	Y	LFNG,LFNG,TTYH3,GNA12	AC006028.11,GNA12	GNA12	MCF7	ChIA-PET	22265404	GNA12	21269	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	2980860	2981267	2981182	Y	NA	NA	NA	NA	NA	NA	GNA12	98902	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	4681329	4681565	4681443	Y	MMD2	NA	SDK1,FOXK1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXK1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	4723112	4724257	4723950	Y	NA	FOXK1	NA	NA	NA	NA	FOXK1	41724	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	4778448	4778853	4778548	Y	KIAA0415	NA	NA	NA	NA	NA	FOXK1	97060	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	5609221	5609424	5609333	Y	FBXL18	ACTB,FSCN1	RNF216,FSCN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACTB	7806	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	5634980	5635411	5634989	Y	AIMP2,FBXL18,ACTB,FSCN1	ACTB,FSCN1	RNF216	IMR90	Hi-C	24141950	FSCN1	4541	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	6425136	6425343	6425226	Y	CCZ1,USP42	RAC1	NA	NA	NA	NA	RAC1	12982	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	6677371	6677641	6677424	Y	DAGLB,ZNF12,C7orf26	C7orf26,ZNF316	NA	NA	NA	NA	ZNF316	2418	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	7216835	7216977	7216903	Y	NA	C1GALT1	C1GALT1	MCF7	ChIA-PET	22265404	C1GALT1	22270	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	7605671	7605858	7605804	Y	NA	MIOS	NA	NA	NA	NA	MIOS	1168	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	8295276	8295343	8295310	Y	NA	AC007009.1,ICA1	NA	NA	NA	NA	AC007009.1	4520	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	11211603	11211773	11211701	Y	NA	NA	NA	NA	NA	NA	PHF14	200104	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	17029591	17029925	17029620	Y	NA	NA	AHR	IMR90	Hi-C	24141950	AGR2	158534	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr7	17412000	17412058	17412028	Y	NA	NA	AHR	IMR90	Hi-C	24141950	AC003075.4	75019	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	18548166	18548343	18548284	Y	NA	NA	NA	NA	NA	NA	SNX13	570042	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	22122614	22122929	22122771	Y	NA	NA	RAPGEF5	IMR90	Hi-C	24141950	CDCA7L	138912	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	22894313	22894860	22894668	Y	STEAP1B,TOMM7	TOMM7,AC005682.5	NA	NA	NA	NA	AC005682.5	2516	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	23060904	23061101	23061016	Y	IL6,FAM126A	FAM126A	LOC100506178,IL6,SNORD93,TOMM7,FAM126A	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FAM126A	9155	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	23348040	23348443	23348292	Y	KLHL7,KLHL7,NUPL2,IGF2BP3	NA	NA	NA	NA	NA	NUPL2	128594	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	23510676	23511223	23510889	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3	NA	NA	NA	NA	IGF2BP3	2590	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	24092646	24092866	24092724	Y	NPY	NA	NA	NA	NA	NA	CCDC126	457648	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	24381432	24381799	24381595	Y	NPY	NA	NA	NA	NA	NA	MPP6	229088	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	24861129	24861331	24861204	Y	C7orf31,DFNA5	NA	NA	NA	NA	NA	DFNA5	53885	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	25064852	25065012	25064919	Y	NA	OSBPL3	OSBPL3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	OSBPL3	45599	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	25269294	25269305	25269300	Y	NPVF	NA	NA	NA	NA	NA	C7orf31	51319	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	25894654	25894946	25894846	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	294914	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	25896245	25896461	25896419	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	293399	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	25901745	25902114	25902023	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	287746	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	27717680	27717897	27717733	Y	NA	HIBADH	HOTTIP,HOXA13,HIBADH,TAX1BP1,JAZF1	IMR90	Hi-C	24141950	HIBADH	17066	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	28076890	28077172	28076964	Y	CREB5	NA	NA	NA	NA	NA	JAZF1-AS1	140769	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	30500037	30500161	30500099	Y	NA	NOD1	NA	NA	NA	NA	NOD1	16239	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	35075861	35076697	35076367	Y	NA	NA	NA	NA	NA	NA	HERPUD2	656484	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr7	35629037	35629048	35629043	Y	NA	NA	NA	NA	NA	NA	HERPUD2	104133	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	36331807	36331936	36331811	Y	NA	NA	NA	NA	NA	NA	ANLN	95479	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	36480174	36480717	36480189	Y	NA	NA	NA	NA	NA	NA	KIAA0895	52440	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	40088776	40089159	40088837	Y	NA	NA	NA	NA	NA	NA	CDK13	101140	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	42927750	42928726	42928340	Y	NA	C7orf25,MRPL32,PSMA2	NA	NA	NA	NA	C7orf25	21178	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr7	43676905	43677264	43677045	Y	POLM,DBNL,STK17A,URGCP	NA	NA	NA	NA	NA	STK17A	56548	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	43714128	43714419	43714274	Y	NA	NA	NA	NA	NA	NA	BLVRA	81860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	44677628	44678244	44677873	Y	ZMIZ2,ZMIZ2,PURB,MYO1G,OGDH	OGDH	ZMIZ2	IMR90	Hi-C	24141950	OGDH	33457	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr7	47475545	47475747	47475668	Y	NA	NA	NA	NA	NA	NA	TNS3	144409	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	47521562	47522093	47521877	Y	HUS1	NA	NA	NA	NA	NA	TNS3	98063	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	47575600	47575737	47575669	Y	NA	TNS3	NA	NA	NA	NA	TNS3	44419	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	47611156	47611689	47611507	Y	C7orf69,TNS3	TNS3	NA	NA	NA	NA	TNS3	8467	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr7	47612587	47612873	47612749	Y	NA	TNS3	NA	NA	NA	NA	TNS3	7283	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	47691174	47691510	47691360	Y	C7orf69,TNS3,C7orf65	NA	TNS3,PKD1L1,LINC00525,C7orf69	IMR90	Hi-C	24141950	TNS3	71018	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	50666851	50666964	50666921	Y	NA	NA	NA	NA	NA	NA	FIGNL1	150763	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	55131480	55131905	55131522	Y	EGFR	EGFR	NA	NA	NA	NA	EGFR	46766	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	55146809	55147410	55146997	Y	NA	NA	NA	NA	NA	NA	EGFR	62095	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	55155188	55155533	55155358	Y	EGFR	NA	NA	NA	NA	NA	EGFR	70474	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	55322570	55322956	55322611	Y	EGFR	NA	EGFR,SEC61G	IMR90	Hi-C	24141950	LANCL2	108185	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	55436942	55437154	55437048	Y	NA	LANCL2	NA	NA	NA	NA	LANCL2	5801	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	55529793	55530311	55530129	Y	ZNF713,VOPP1	NA	NA	NA	NA	NA	LANCL2	98652	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	56029737	56030120	56029923	Y	CCT6A,MRPS17,GBAS	GBAS,MRPS17	NA	NA	NA	NA	MRPS17	12225	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	66152523	66152575	66152558	Y	RABGEF1,KCTD7	RP4-756H11.3,RABGEF1	KCTD7,LOC493754,RABGEF1	IMR90	Hi-C	24141950	RABGEF1	7372	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	73132412	73132545	73132481	Y	LAT2,BCL7B	WBSCR22,DNAJC30,STX1A,ABHD11	NA	NA	NA	NA	STX1A	410	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	74001829	74001994	74001904	Y	NA	NA	GTF2I	IMR90	Hi-C	24141950	GTF2I	68000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	75573320	75573489	75573400	Y	POR	POR,TMEM120A	NA	NA	NA	NA	POR	46802	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	76907614	76907779	76907731	Y	NA	NA	NA	NA	NA	NA	CCDC146	157863	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	77316787	77316835	77316811	Y	NA	RSBN1L-AS1,RSBN1L	NA	NA	NA	NA	RSBN1L-AS1	6747	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	85711087	85711321	85711204	Y	NA	NA	NA	NA	NA	NA	SEMA3D	896916	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	92282305	92282698	92282463	Y	LRRD1,KRIT1,KRIT1,KRIT1,SAMD9L,SAMD9	NA	NA	NA	NA	NA	FAM133B	64597	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	92574319	92574346	92574333	Y	NA	NA	NA	NA	NA	NA	CDK6	110411	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	95238124	95238400	95238252	Y	PON1,PON3	PDK4	NA	NA	NA	NA	PDK4	14321	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	95861904	95862185	95862172	Y	NA	NA	NA	NA	NA	NA	SLC25A13	87274	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	95877265	95877280	95877275	Y	NA	NA	NA	NA	NA	NA	SLC25A13	72179	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	96748066	96748124	96748095	Y	NA	ACN9	NA	NA	NA	NA	ACN9	4164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	97915595	97916070	97915699	Y	LMTK2,BRI3	TECPR1,BRI3	NA	NA	NA	NA	BRI3	35904	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	98048213	98048460	98048408	Y	BRI3	RPS3AP26,BAIAP2L1	BAIAP2L1,TRRAP,TMEM130	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BAIAP2L1	19833	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	99684818	99685168	99684993	Y	TSC22D4,PILRB,PILRA	ZSCAN21,ZNF3,COPS6,AP4M1,MCM7,CNPY4,TAF6,MBLAC1	NA	NA	NA	NA	COPS6	241	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	100765253	100766084	100765924	Y	TRIM56,SERPINE1	TRIM56,SERPINE1,AP1S1,VGF	NA	NA	NA	NA	SERPINE1	2286	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	101499743	101500539	101499888	Y	SH2B2,CUX1,CUX1,CUX1	CUX1	NA	NA	NA	NA	CUX1	42784	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	101596326	101596693	101596419	Y	SH2B2,CUX1,CUX1	NA	NA	NA	NA	NA	CUX1	139367	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	101929978	101930313	101930074	Y	CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2	NA	NA	NA	NA	NA	PRKRIP1	72006	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr7	102941984	102942200	102942104	Y	NA	DPY19L2P2,PMPCB,PSMC2,DNAJC2,CTA-276O3.4	NA	NA	NA	NA	PMPCB	6115	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	104597631	104597869	104597756	Y	MLL5	NA	NA	NA	NA	NA	LINC01004	53622	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	104980501	104980737	104980707	Y	NA	NA	NA	NA	NA	NA	SRPK2	57018	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	106065261	106066901	106065591	Y	NA	NA	NAMPT,CCDC71L	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NAMPT	140489	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	107205466	107205592	107205534	Y	COG5	DUS4L,COG5,BCAP29	NA	NA	NA	NA	COG5	2507	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	107573965	107574445	107574339	Y	LAMB1	DLD	NA	NA	NA	NA	DLD	44550	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	111641194	111641556	111641398	Y	ZNF277,IFRD1,DOCK4	NA	NA	NA	NA	NA	DOCK4	202910	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	114677768	114677789	114677777	Y	MDFIC	NA	NA	NA	NA	NA	MDFIC	117559	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	116035470	116035688	116035648	Y	NA	NA	CAV1	IMR90	Hi-C	24141950	CAV2	110036	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	116523983	116524309	116524052	Y	NA	NA	NA	NA	NA	NA	ST7	66983	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	123387767	123387941	123387854	Y	NA	WASL	NA	NA	NA	NA	WASL	646	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	126341155	126341491	126341268	Y	NA	NA	NA	NA	NA	NA	ZNF800	728487	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	128170830	128171695	128171212	Y	NA	RP11-212P7.1	IMPDH1,HILPDA,METTL2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-212P7.1	37047	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr7	129419876	129420343	129420085	Y	NA	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	NRF1	170321	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr7	130586004	130586434	130586371	Y	NA	MIR29A	NA	NA	NA	NA	MIR29A	9635	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	130588239	130588699	130588531	Y	MKLN1,MKLN1	MIR29A	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MIR29A	7370	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130589567	130590049	130589961	Y	NA	MIR29A	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MIR29A	6020	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130633473	130633870	130633858	Y	NA	MIR29A	NA	NA	NA	NA	MIR29A	37404	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130636331	130636776	130636707	Y	MKLN1	MIR29A	NA	NA	NA	NA	MIR29A	40262	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130641725	130642119	130642041	Y	MKLN1	MIR29A	NA	NA	NA	NA	MIR29A	45656	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130658258	130658537	130658456	Y	NA	NA	NA	NA	NA	NA	MIR29A	62189	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130720133	130720826	130720768	Y	MKLN1,MKLN1	NA	NA	NA	NA	NA	MKLN1	72029	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130741821	130742227	130742136	Y	NA	NA	NA	NA	NA	NA	MKLN1	50628	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	130795999	130796263	130796171	Y	MKLN1,MKLN1	MKLN1,LINC-PINT	NA	NA	NA	NA	LINC-PINT	3064	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	131580267	131580830	131580536	Y	NA	NA	PLXNA4	IMR90	Hi-C	24141950	AC009518.4	0	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	132488555	132488726	132488642	Y	NA	NA	NA	NA	NA	NA	PLXNA4	157108	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	134117156	134117311	134117298	Y	NA	AKR1B1	NA	NA	NA	NA	AKR1B1	24725	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	134354676	134354988	134354798	Y	NA	BPGM	NA	NA	NA	NA	BPGM	25116	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	137387266	137387617	137387499	Y	NA	NA	NA	NA	NA	NA	CREB3L2	297196	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	139431881	139432226	139432135	Y	TBXAS1,JHDM1D,HIPK2	HIPK2	NA	NA	NA	NA	HIPK2	43351	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	140024684	140024714	140024699	Y	NA	NA	NA	NA	NA	NA	SLC37A3	77519	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	140267387	140267618	140267517	Y	DENND2A	NA	NA	NA	NA	NA	MKRN1	90018	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	148638273	148638633	148638462	Y	NA	NA	EZH2,ZNF786,ZNF398,ZNF425,CUL1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EZH2	58860	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr7	148684338	148684706	148684475	Y	NA	PDIA4	NA	NA	NA	NA	PDIA4	39027	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	149468740	149469267	149468803	Y	NA	ZNF467	NA	NA	NA	NA	ZNF467	172	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr7	151184518	151184840	151184768	Y	NA	RHEB	NA	NA	NA	NA	RHEB	30366	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	151442202	151442898	151442523	Y	NA	NA	CRYGN,RHEB	IMR90	Hi-C	24141950	PRKAG2-AS1	129229	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	151479942	151479960	151479953	Y	NA	NA	NA	NA	NA	NA	PRKAG2-AS1	92167	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	152065077	152065428	152065152	Y	NA	NA	NA	NA	NA	NA	XRCC2	305822	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	152160715	152161193	152160959	Y	NA	NA	NA	NA	NA	NA	XRCC2	210057	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	155580383	155580450	155580415	Y	NA	SHH	NA	NA	NA	NA	SHH	22517	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	155744220	155744341	155744281	Y	NA	AC021218.2	LOC285889,SHH,LMBR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC021218.2	8985	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	155744375	155744769	155744531	Y	NA	AC021218.2	LOC285889,SHH,LMBR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC021218.2	8557	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	155754558	155754796	155754722	Y	NA	AC021218.2	LOC285889	IMR90	Hi-C	24141950	AC021218.2	1232	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr7	156932490	156932855	156932681	Y	NA	UBE3C	NA	NA	NA	NA	UBE3C	2883	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	157067817	157068138	157067978	Y	NA	NA	NA	NA	NA	NA	DNAJB6	57937	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	157092515	157093215	157092989	Y	DNAJB6,DNAJB6	DNAJB6	UBE3C,DNAJB6	IMR90	Hi-C	24141950	DNAJB6	32860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	157338058	157338440	157338352	Y	NA	NA	NA	NA	NA	NA	DNAJB6	211983	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	158224670	158224991	158224878	Y	NA	NA	NA	NA	NA	NA	NCAPG2	270529	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr7	158225517	158225999	158225657	Y	NA	NA	NA	NA	NA	NA	NCAPG2	269521	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr7	158387429	158387829	158387629	Y	WDR60	NA	PTPRN2	K562	ChIA-PET	22265404	NCAPG2	107691	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr7	158603982	158604371	158604316	Y	NA	ESYT2,WDR60	NA	NA	NA	NA	ESYT2	16573	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	1836847	1837132	1836956	Y	KBTBD11	NA	NA	NA	NA	NA	ARHGEF10	66705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	2591169	2591450	2591225	Y	NA	NA	NA	NA	NA	NA	KBTBD11	671125	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	6726672	6726933	6726783	Y	NA	XKR5	NA	NA	NA	NA	XKR5	35506	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	8153597	8154098	8153801	Y	NA	NA	MFHAS1,SGK223,CLDN23,FLJ10661	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SGK223	87910	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	9408701	9409304	9408905	Y	NA	TNKS	NA	NA	NA	NA	TNKS	2120	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	9912937	9913246	9913138	Y	NA	MSRA	NA	NA	NA	NA	MSRA	3159	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	11312887	11313950	11313920	Y	NA	FAM167A	NA	NA	NA	NA	FAM167A	16274	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	18993184	18993532	18993372	Y	NA	NA	LOC100128993,PSD3	IMR90	Hi-C	24141950	PSD3	52944	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	19341372	19341590	19341526	Y	NA	NA	NA	NA	NA	NA	SH2D4A	172244	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	19522969	19523285	19523139	Y	NA	NA	NA	NA	NA	NA	CSGALNACT1	90255	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	21624397	21624558	21624547	Y	NPM2,GFRA2	GFRA2	NA	NA	NA	NA	GFRA2	43311	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	21804083	21804253	21804128	Y	NA	XPO7	NA	NA	NA	NA	XPO7	28903	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	22561043	22561327	22561142	Y	PPP3CC,PDLIM2,BIN3,TNFRSF10B,EGR3	BIN3,EGR3	NA	NA	NA	NA	EGR3	12228	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	22710401	22710511	22710455	Y	NA	NA	NA	NA	NA	NA	RHOBTB2	132419	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	23016406	23016568	23016458	Y	ENTPD4,ENTPD4,BIN3,TNFRSF10C	TNFRSF10D	NA	NA	NA	NA	TNFRSF10D	2975	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	23020215	23020436	23020325	Y	NA	TNFRSF10D	NA	NA	NA	NA	TNFRSF10D	672	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	23390028	23390384	23390041	Y	TNFRSF10B,TNFRSF10C,ENTPD4,ENTPD4	SLC25A37	NA	NA	NA	NA	SLC25A37	5710	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	23405243	23405645	23405476	Y	TNFRSF10B,TNFRSF10C,ENTPD4,ENTPD4	SLC25A37	NA	NA	NA	NA	SLC25A37	20925	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	23618921	23619563	23619216	Y	ENTPD4,ENTPD4	NA	STC1,ENTPD4	IMR90	Hi-C	24141950	NKX3-1	80481	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	24857844	24858008	24857898	Y	NA	NA	NA	NA	NA	NA	DOCK5	182230	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	25904215	25904335	25904275	Y	NA	NA	NA	NA	NA	NA	PPP2R2A	242672	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	26162518	26162881	26162571	Y	NA	PPP2R2A	NA	NA	NA	NA	PPP2R2A	15511	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	26306627	26307336	26307213	Y	NA	NA	BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PNMA2	62272	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	26429509	26429959	26429867	Y	NA	NA	NA	NA	NA	NA	DPYSL2	59718	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	26466894	26467238	26467101	Y	NA	NA	NA	NA	NA	NA	DPYSL2	97103	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	27730121	27730534	27730322	Y	ELP3,PBK	PBK	NA	NA	NA	NA	PBK	36509	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	28258528	28258941	28258737	Y	HMBOX1,HMBOX1	ZNF395	ZNF395,FBXO16	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF395	310	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	29230784	29230978	29230896	Y	KIF13B,DUSP4	DUSP4	C8orf75,LOC286135,MIR3148,MIR548O2,TMEM66,LEPROTL1,DUSP4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DUSP4	24599	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr8	29495067	29495424	29495202	Y	KIF13B	NA	DUSP4,LOC286135,C8orf75,MIR3148	IMR90	Hi-C	24141950	DUSP4	288882	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr8	29499383	29499527	29499389	Y	KIF13B	NA	DUSP4,LOC286135,C8orf75,MIR3148	IMR90	Hi-C	24141950	DUSP4	293198	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	29526859	29527039	29527017	Y	NA	NA	LOC286135,DUSP4,C8orf75	IMR90	Hi-C	24141950	DUSP4	320674	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr8	30769723	30770025	30769859	Y	NA	NA	TEX15,WRN,PPP2CB,PURG	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPP2CB	99893	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	32191944	32192171	32192069	Y	NRG1	NA	NA	NA	NA	NA	NRG1	697042	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	32491615	32491938	32491677	Y	NRG1	NA	NA	NA	NA	NA	FUT10	837002	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	35382808	35383133	35382968	Y	NA	LSM12P1	NA	NA	NA	NA	LSM12P1	1527	CAGE	1C3IKEI	hg19	FANTOM5	2.75626112439819
chr8	38856419	38857534	38856583	Y	NA	TM2D2,ADAM9	NA	NA	NA	NA	ADAM9	4031	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	48265920	48266584	48265994	Y	NA	NA	NA	NA	NA	NA	NDUFA5P12	191427	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	48424795	48425379	48425168	Y	NA	NA	NA	NA	NA	NA	RP11-697N18.2	77792	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	48486280	48486631	48486481	Y	NA	RP11-697N18.2	NA	NA	NA	NA	RP11-697N18.2	16540	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	49320367	49320668	49320511	Y	NA	RPL29P19	SNAI2	IMR90	Hi-C	24141950	RPL29P19	25217	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	54720057	54720661	54720376	Y	ATP6V1H,ATP6V1H	ATP6V1H,RGS20	NA	NA	NA	NA	ATP6V1H	33457	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	56362318	56362387	56362358	Y	NA	NA	NA	NA	NA	NA	TGS1	321314	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	58908204	58908269	58908237	Y	NA	FAM110B	NA	NA	NA	NA	FAM110B	3136	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	61564243	61564650	61564285	Y	CA8,CHD7	CHD7	CHD7,RAB2A	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHD7	24687	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	63776641	63776831	63776733	Y	NA	NA	NA	NA	NA	NA	GGH	172899	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr8	66652181	66652518	66652302	Y	NA	NA	NA	NA	NA	NA	MTFR1	97212	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	68075038	68075412	68075329	Y	NA	NA	NA	NA	NA	NA	COPS5	81020	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	68105132	68105308	68105276	Y	NA	NA	NA	NA	NA	NA	COPS5	111114	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	69672075	69672426	69672227	Y	NA	NA	NA	NA	NA	NA	CPA6	1015455	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	70310732	70311124	70310931	Y	NA	NA	C8orf34	IMR90	Hi-C	24141950	RP11-159H10.3	433222	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	71106642	71106934	71106707	Y	NCOA2	NA	NA	NA	NA	NA	RP11-152C15.1	92228	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	80705910	80706255	80706054	Y	HEY1	HEY1	HEY1,MRPS28	IMR90	Hi-C	24141950	HEY1	27812	CAGE	1C3IKEI	hg19	FANTOM5	3.98126606857516
chr8	81962809	81963138	81963038	Y	PAG1	NA	NA	NA	NA	NA	PAG1	59165	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	87484005	87484360	87484214	Y	NA	CPNE3,SLC2A3P4	NA	NA	NA	NA	CPNE3	10699	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	95271404	95271652	95271620	Y	GEM	GEM	NA	NA	NA	NA	GEM	926	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	96146998	96147210	96147103	Y	TP53INP1,PLEKHF2	PLEKHF2	NA	NA	NA	NA	PLEKHF2	2966	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	97319675	97319761	97319753	Y	NA	MTERFD1,PTDSS1	NA	NA	NA	NA	PTDSS1	47732	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	101731045	101731633	101731441	Y	NA	PABPC1	NA	NA	NA	NA	PABPC1	1404	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	101910554	101910754	101910651	Y	ZNF706,ZNF706,YWHAZ,YWHAZ	NA	NA	NA	NA	NA	YWHAZ	52862	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	101914244	101914460	101914402	Y	ZNF706,ZNF706,YWHAZ,YWHAZ	YWHAZ	NA	NA	NA	NA	YWHAZ	49156	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	102103047	102103317	102103255	Y	YWHAZ	NA	NA	NA	NA	NA	ZNF706	113104	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	103649732	103649974	103649861	Y	AZIN1,KLF10,KLF10	KLF10	NA	NA	NA	NA	KLF10	16156	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	103669513	103669869	103669680	Y	AZIN1,ATP6V1C1,KLF10,KLF10	KLF10	NA	NA	NA	NA	KLF10	3383	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	103801151	103801773	103801337	Y	NA	NA	KLF10,UBR5,ODF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1507C5.2	72755	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	103803215	103803631	103803453	Y	AZIN1,ATP6V1C1,KLF10,KLF10	NA	KLF10,UBR5,ODF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1507C5.2	70897	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	103906775	103907150	103906829	Y	NA	KB-1507C5.2,AZIN1	ATP6V1C1	IMR90	Hi-C	24141950	AZIN1	2683	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	104090039	104090169	104090107	Y	NA	NA	NA	NA	NA	NA	ATP6V1C1	58748	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	104331705	104332089	104331783	Y	RIMS2	FZD6,RP11-318M2.2,CTHRC1	NA	NA	NA	NA	RP11-318M2.2	22705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	106764019	106764032	106764026	Y	NA	NA	NA	NA	NA	NA	RP11-152P17.2	306720	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	109230205	109230491	109230349	Y	NA	NA	NA	NA	NA	NA	EIF3E	215071	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	111947421	111947490	111947466	Y	NA	NA	NA	NA	NA	NA	SYBU	1245401	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	116454411	116454736	116454628	Y	NA	NA	NA	NA	NA	NA	TRPS1	365163	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	119023512	119024035	119023740	Y	EXT1	NA	NA	NA	NA	NA	EXT1	98057	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	119333193	119333561	119333493	Y	NA	NA	NA	NA	NA	NA	EXT1	211101	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	119485123	119485454	119485409	Y	NA	NA	NA	NA	NA	NA	SAMD12	146780	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	120779948	120780281	120780115	Y	NA	NA	NA	NA	NA	NA	TAF2	62822	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	121822442	121823157	121823030	Y	NA	NA	NA	NA	NA	NA	MRPL13	366800	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	124248679	124249062	124248866	Y	NA	C8orf76,ZHX1	NA	NA	NA	NA	C8orf76	2576	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	124816728	124816894	124816751	Y	NA	FAM91A1	NA	NA	NA	NA	FAM91A1	38032	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	126195292	126195668	126195512	Y	TRIB1,KIAA0196,NSMCE2	NA	TRIB1	IMR90	Hi-C	24141950	KIAA0196	93210	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr8	126245115	126245425	126245196	Y	KIAA0196,NSMCE2,TRIB1	NA	NA	NA	NA	NA	KIAA0196	143033	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	126518421	126518590	126518541	Y	KIAA0196,NSMCE2,TRIB1	NA	KIAA0196,NSMCE2,TRIB1	IMR90	Hi-C	24141950	TRIB1	77858	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	126526927	126527334	126527200	Y	KIAA0196,NSMCE2,TRIB1	NA	KIAA0196,NSMCE2,TRIB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TRIB1	86364	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	128099457	128099542	128099514	Y	NA	NA	NA	NA	NA	NA	FAM84B	530819	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	128822019	128822203	128822035	Y	NA	PVT1	NA	NA	NA	NA	PVT1	17240	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	128835085	128835527	128835341	Y	NA	PVT1	NA	NA	NA	NA	PVT1	30306	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	128888912	128889201	128889088	Y	NA	NA	NA	NA	NA	NA	PVT1	84133	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	128919831	128920544	128920233	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	100313	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	128944008	128944415	128944139	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	76442	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	129053712	129054462	129054053	Y	NA	RNU4-25P	NA	NA	NA	NA	RNU4-25P	32855	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	129115789	129116244	129116059	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	94932	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	129188825	129189407	129189075	Y	NA	NA	MYC,PVT1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	167968	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	129339245	129339624	129339435	Y	NA	NA	PVT1,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	318388	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	130720341	130720558	130720412	Y	NA	NA	PVT1	IMR90	Hi-C	24141950	FAM49B	306817	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	131291188	131291588	131291505	Y	NA	NA	NA	NA	NA	NA	ASAP1	162318	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	132868655	132869774	132869195	Y	EFR3A	EFR3A	ADCY8	IMR90	Hi-C	24141950	EFR3A	44561	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	133562041	133562364	133562205	Y	HHLA1,KCNQ3,KCNQ3	NA	NA	NA	NA	NA	LRRC6	123474	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	134315401	134315895	134315622	Y	ST3GAL1	NDRG1,CTC-458A3.1	TG,NDRG1,ST3GAL1	IMR90	Hi-C	24141950	NDRG1	3136	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	134699077	134699376	134699146	Y	NA	NA	ST3GAL1	IMR90	Hi-C	24141950	ST3GAL1	116894	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	134902873	134903347	134903149	Y	ST3GAL1	NA	ST3GAL1,ZFAT	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ST3GAL1	320690	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	141474376	141475403	141474918	Y	NA	TRAPPC9,CHRAC1	TRAPPC9,EIF2C2,CHRAC1	K562,MCF7	ChIA-PET	22265404	TRAPPC9	7698	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	141598802	141599709	141599120	Y	TRAPPC9,CHRAC1,EIF2C2	NA	NA	NA	NA	NA	CHRAC1	79405	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr8	141606825	141607480	141607253	Y	TRAPPC9,CHRAC1,EIF2C2	NA	NA	NA	NA	NA	CHRAC1	87428	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	142047873	142048201	142048171	Y	PTK2	PTK2	PTK2,DENND3,SLC45A4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTK2	37558	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr8	142163740	142163864	142163753	Y	NA	DENND3	NA	NA	NA	NA	DENND3	38363	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	142215999	142216277	142216212	Y	DENND3,SLC45A4	NA	NA	NA	NA	NA	DENND3	90622	CAGE	1C3IKEI	hg19	FANTOM5	2.45000988835395
chr8	142216641	142216829	142216751	Y	DENND3,SLC45A4	NA	NA	NA	NA	NA	DENND3	91264	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr8	144360422	144361034	144360946	Y	ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT	ZFP41,GLI4,RP13-582O9.5,ZNF696	NA	NA	NA	NA	RP13-582O9.5	826	CAGE	1C3IKEI	hg19	FANTOM5	3.06251236044243
chr8	144960453	144960673	144960604	Y	C8orf73,TIGD5,FAM83H,PLEC,PLEC,EPPK1	NRBP2,EPPK1	PLEC	IMR90	Hi-C	24141950	EPPK1	9821	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	145002494	145002937	145002709	Y	SPATC1,PLEC	PLEC	NA	NA	NA	NA	PLEC	45965	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr8	145015768	145015971	145015849	Y	FAM83H,EPPK1,PLEC,PLEC,PLEC	PLEC,GRINA	NA	NA	NA	NA	PLEC	32931	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr8	145022492	145023108	145022824	Y	PLEC,PLEC,PLEC,SPATC1,PLEC,GRINA	PLEC,GRINA	NA	NA	NA	NA	PLEC	25794	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr8	146010487	146010786	146010731	Y	NA	ZNF251,RPL8,ZNF7	NA	NA	NA	NA	ZNF34	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	2655543	2655805	2655674	Y	NA	VLDLR,RP11-125B21.2	NA	NA	NA	NA	RP11-125B21.2	16148	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	2839342	2839735	2839533	Y	NA	KIAA0020	NA	NA	NA	NA	KIAA0020	2506	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	2875811	2876206	2875956	Y	NA	KIAA0020	NA	NA	NA	NA	KIAA0020	33570	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	3971837	3971870	3971849	Y	NA	NA	NA	NA	NA	NA	GLIS3	374522	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	4042913	4043209	4043135	Y	NA	NA	NA	NA	NA	NA	GLIS3	303183	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	4656742	4656927	4656747	Y	PPAPDC2,CDC37L1,C9orf68	PPAPDC2,CDC37L1	NA	NA	NA	NA	PPAPDC2	3371	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	6680895	6681975	6681336	Y	UHRF2,KDM4C	RP11-106A1.2,RP11-390F4.6,KDM4C	KDM4C,UHRF2,GLDC	K562,MCF7	ChIA-PET	22265404	KDM4C	36888	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	6958089	6958102	6958095	Y	NA	NA	NA	NA	NA	NA	KDM4C	239226	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	13034069	13034552	13034397	Y	NA	NA	NFIB	IMR90	Hi-C	24141950	RP11-3L8.3	221725	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	14263032	14263410	14263221	Y	NA	NA	NA	NA	NA	NA	NFIB	133572	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	14322295	14322910	14322674	Y	ZDHHC21,NFIB	NA	NA	NA	NA	NA	NFIB	74072	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	16062752	16063225	16063009	Y	NA	NA	CNTLN,C9orf93,BNC2	IMR90	Hi-C	24141950	FTH1P12	537071	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	16337405	16337786	16337534	Y	NA	NA	BNC2	IMR90	Hi-C	24141950	RP11-62F24.2	387026	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	21696721	21697113	21696912	Y	IFNA8	NA	MIR31HG	IMR90	Hi-C	24141950	UBA52P6	313041	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	29213900	29214394	29214154	Y	NA	NA	NA	NA	NA	NA	MOB3B	1686121	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	33160944	33161390	33161236	Y	DNAJA1,SMU1,B4GALT1	B4GALT1	NA	NA	NA	NA	B4GALT1	3964	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	33165457	33166051	33165900	Y	DNAJA1,SMU1,NFX1,CHMP5,B4GALT1	B4GALT1	NA	NA	NA	NA	B4GALT1	103	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	34233080	34233513	34233116	Y	NA	RP11-571F15.3	NA	NA	NA	NA	RP11-571F15.3	10454	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	35490989	35491345	35491127	Y	NA	NA	NA	NA	NA	NA	TESK1	112022	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	35603992	35604628	35604112	Y	TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2	TESK1	NA	NA	NA	NA	TESK1	625	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	35907858	35908401	35908282	Y	OR2S2,OR13J1,HRCT1	NDUFA5P4,HRCT1	NA	NA	NA	NA	HRCT1	3669	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	36040345	36040403	36040371	Y	NA	RECK	NA	NA	NA	NA	RECK	5915	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	36232965	36233105	36233040	Y	NA	CLTA,GNE	NA	NA	NA	NA	GNE	41948	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	36924974	36925090	36925030	Y	MELK	NA	NA	NA	NA	NA	ZCCHC7	193446	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	37036641	37037011	37036829	Y	ZCCHC7,ZBTB5,PAX5	NA	NA	NA	NA	NA	ZCCHC7	81525	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	37197498	37198123	37197885	Y	NA	NA	NA	NA	NA	NA	ZCCHC7	78962	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	37773119	37773290	37773253	Y	FRMPD1	DCAF10,EXOSC3	NA	NA	NA	NA	DCAF10	25209	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	37938183	37938323	37938277	Y	SHB	NA	NA	NA	NA	NA	RP11-613M10.9	128361	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	38437570	38437747	38437611	Y	NA	ALDH1B1,IGFBPL1	TOMM5,IGFBPL1,ALDH1B1	IMR90	Hi-C	24141950	IGFBPL1	15126	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	68417391	68418146	68417579	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	35229	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	68455261	68455556	68455421	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	1886	CAGE	1C3IKEI	hg19	FANTOM5	17.1500692184776
chr9	71728196	71728449	71728285	Y	NA	TJP2	NA	NA	NA	NA	TJP2	5760	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	71941434	71941762	71941458	Y	NA	NA	NA	NA	NA	NA	TJP2	207225	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	73033763	73035382	73035076	Y	SMC5,KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	6223	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	73035561	73035945	73035863	Y	KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	8021	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	74511654	74511799	74511765	Y	NA	C9orf85	NA	NA	NA	NA	C9orf85	12627	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	74849498	74849569	74849533	Y	GDA,GDA,TMC1	NA	NA	NA	NA	NA	RP11-63P12.6	68777	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	75201715	75201894	75201832	Y	ZFAND5	NA	NA	NA	NA	NA	ZFAND5	223552	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	75791521	75791823	75791639	Y	NA	ANXA1	NA	NA	NA	NA	ANXA1	26848	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	75834786	75835127	75834913	Y	ANXA1	NA	RORB	IMR90	Hi-C	24141950	ANXA1	70113	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	80911003	80911373	80911119	Y	PSAT1	PSAT1	NA	NA	NA	NA	PSAT1	944	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	85587803	85587810	85587807	Y	NA	NA	NA	NA	NA	NA	RASEF	88282	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	89699545	89699882	89699714	Y	NA	NA	NA	NA	NA	NA	CDC20P1	74978	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	90328172	90328868	90328486	Y	DAPK1,CTSL1	NA	CTSL1	IMR90	Hi-C	24141950	RP11-40C6.2	189955	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	90407699	90408115	90407854	Y	DAPK1,CTSL1	NA	NA	NA	NA	NA	CDK20	179553	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	93893646	93894080	93893930	Y	NA	NA	LOC100129316,AUH	IMR90	Hi-C	24141950	AUH	228115	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	93955243	93955725	93955362	Y	SYK,SYK,NFIL3	NA	NA	NA	NA	NA	AUH	166470	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	94993084	94993195	94993158	Y	NA	NA	NA	NA	NA	NA	IARS	60843	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	95878204	95878686	95878424	Y	IPPK,PHF2,FAM120A,C9orf89,NINJ1	C9orf89,NINJ1	NA	NA	NA	NA	NINJ1	15884	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	96057493	96057765	96057581	Y	ZNF484,ZNF484,C9orf129,WNK2	NA	NA	NA	NA	NA	FAM120A	154239	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	96434811	96435085	96434948	Y	PHF2	NA	NA	NA	NA	NA	PHF2	98122	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	96928143	96928630	96928259	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	10486	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr9	96928795	96929410	96929111	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	9706	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr9	97893656	97893882	97893768	Y	NA	NA	NA	NA	NA	NA	FANCC	184109	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	98273012	98273438	98273114	Y	C9orf102,FANCC,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	PTCH1	NA	NA	NA	NA	PTCH1	3901	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	99106686	99107122	99106995	Y	NA	SLC35D2	NA	NA	NA	NA	SLC35D2	36870	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	99181547	99181719	99181643	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	ZNF367	2936	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	99182775	99182932	99182834	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	ZNF367	4164	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	100772550	100772875	100772560	Y	NA	ANP32B,NANS	NANS,TRIM14	IMR90	Hi-C	24141950	ANP32B	28907	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	101137509	101137713	101137616	Y	NA	NA	NA	NA	NA	NA	TBC1D2	121594	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	101871896	101872113	101872024	Y	TGFBR1	TGFBR1	NA	NA	NA	NA	TGFBR1	7576	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	102580616	102580992	102580865	Y	NA	RP11-554F20.1,NR4A3	NA	NA	NA	NA	RP11-554F20.1	445	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	103645805	103646002	103645904	Y	NA	NA	NA	NA	NA	NA	MRPL50	512894	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	104248590	104248780	104248669	Y	C9orf125	RNF20	NA	NA	NA	NA	RNF20	45353	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	107723549	107723790	107723714	Y	NIPSNAP3A,ABCA1	ABCA1,RP11-217B7.3	ABCA1	IMR90	Hi-C	24141950	RP11-217B7.3	28272	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	107730510	107730878	107730708	Y	SLC44A1,FSD1L,FSD1L,ABCA1	ABCA1,RP11-217B7.3	ABCA1	IMR90	Hi-C	24141950	RP11-217B7.3	21184	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	108272295	108272828	108272406	Y	TMEM38B	FKTN	NA	NA	NA	NA	FKTN	45583	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	108284643	108284789	108284719	Y	NA	FKTN	NA	NA	NA	NA	FKTN	33622	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	109627297	109627657	109627483	Y	NA	ZNF462	NA	NA	NA	NA	ZNF462	3919	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	110512153	110512586	110512216	Y	KLF4	NA	KLF4	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-438P9.1	217482	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr9	110514044	110514454	110514287	Y	KLF4	NA	KLF4	MCF7	ChIA-PET	22265404	RP11-438P9.1	219373	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr9	111774521	111775173	111774726	Y	NA	CTNNAL1	NA	NA	NA	NA	CTNNAL1	712	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	112811971	112812606	112812251	Y	AKAP2	RP11-151F5.2	NA	NA	NA	NA	RP11-151F5.2	26333	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	114111620	114111657	114111640	Y	OR2K2	NA	NA	NA	NA	NA	KIAA0368	133368	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	114720285	114720825	114720474	Y	UGCG	NA	C9orf84,UGCG,MIR3134,SUSD1,HSDL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UGCG	63239	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	114723325	114723781	114723480	Y	NA	NA	C9orf84,UGCG,MIR3134,SUSD1,HSDL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UGCG	66279	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	114828005	114828556	114828288	Y	UGCG	NA	NA	NA	NA	NA	SUSD1	107132	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	115071018	115071139	115071076	Y	NA	PTBP3	NA	NA	NA	NA	PTBP3	22808	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	115981344	115981857	115981657	Y	SNX30,SLC46A2,RGS3,SLC31A2,FKBP15	NA	NA	NA	NA	NA	FKBP15,SLC31A1	0	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	116937744	116937911	116937764	Y	ORM1,COL27A1	COL27A1	NA	NA	NA	NA	COL27A1	21904	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	117159955	117160026	117159991	Y	NA	NA	NA	NA	NA	NA	DFNB31	105704	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	117249092	117249487	117249472	Y	NA	DFNB31	NA	NA	NA	NA	DFNB31	16243	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	118358577	118359027	118358666	Y	NA	NA	ASTN2,PAPPA,LOC100128505,LINC00474	IMR90	Hi-C	24141950	TNC	480041	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	118434933	118435213	118435118	Y	NA	NA	ASTN2,PAPPA,LOC100128505	IMR90	Hi-C	24141950	TNC	556397	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	118436011	118436199	118436119	Y	NA	NA	ASTN2,PAPPA,LOC100128505	IMR90	Hi-C	24141950	TNC	557475	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	119722130	119722198	119722164	Y	NA	NA	NA	NA	NA	NA	TRIM32	274549	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	123478444	123478636	123478538	Y	NA	MEGF9	NA	NA	NA	NA	MEGF9	3696	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	124361597	124361984	124361689	Y	NA	DAB2IP	NA	NA	NA	NA	DAB2IP	34261	CAGE	1C3IKEI	hg19	FANTOM5	2.1437586523097
chr9	124498744	124498978	124498839	Y	GSN	NA	NA	NA	NA	NA	DAB2IP	171408	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	127155102	127155374	127155331	Y	DENND1A	PSMB7	NA	NA	NA	NA	PSMB7	20349	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	127433186	127433516	127433351	Y	NR6A1	MIR181A2HG	NA	NA	NA	NA	MIR181A2HG	14440	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	127519137	127519296	127519279	Y	NA	NR6A1,OLFML2A	NA	NA	NA	NA	NR6A1	12293	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	127519728	127520109	127519909	Y	NA	NR6A1,OLFML2A	NA	NA	NA	NA	NR6A1	11480	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	127944437	127944756	127944696	Y	NR6A1,GOLGA1,PPP6C,GAPVD1	SCAI,PPP6C,RABEPK	NA	NA	NA	NA	PPP6C	5462	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	127947242	127947259	127947251	Y	NA	SCAI,PPP6C,RABEPK	NA	NA	NA	NA	PPP6C	2959	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	127980597	127980978	127980790	Y	NA	PPP6C,RABEPK,HSPA5,RP11-65N13.8,GAPVD1	NA	NA	NA	NA	RABEPK	19776	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	128172483	128172773	128172647	Y	NA	NA	PBX3	MCF7	ChIA-PET	22265404	GAPVD1	150410	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	128230899	128231249	128231074	Y	NA	NA	NA	NA	NA	NA	GAPVD1	208826	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	128530354	128530667	128530385	Y	NA	PBX3	NA	NA	NA	NA	PBX3	22730	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	130281582	130281994	130281773	Y	TOR2A,SH2D3C,FAM129B,CDK9	NA	NA	NA	NA	NA	FAM129B	57274	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	130304237	130304411	130304308	Y	FAM129B,FAM129B	FAM129B	NA	NA	NA	NA	FAM129B	34857	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	130308766	130308904	130308855	Y	NA	FAM129B	NA	NA	NA	NA	FAM129B	30364	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	130329548	130329691	130329605	Y	PTRH1,FPGS,FPGS,ENG,CDK9,FAM129B,FAM129B	FAM129B,STXBP1	NA	NA	NA	NA	FAM129B	9577	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	130600573	130601245	130600861	Y	FAM129B,TOR2A,CDK9,FPGS,FPGS	FPGS,ENG,AK1	NA	NA	NA	NA	ENG	13790	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr9	130733540	130734011	130733863	Y	SLC25A25,NAIF1,DPM2,FAM102A,FAM102A	PIP5KL1,DPM2,FAM102A	NA	NA	NA	NA	FAM102A	6781	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	131936354	131936600	131936398	Y	METTL11A,PPP2R4,PPP2R4,PPP2R4	IER5L	NA	NA	NA	NA	IER5L	1940	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	131937094	131937487	131937262	Y	PRRX2,METTL11A,ASB6,ZDHHC12,TBC1D13,ENDOG,PHYHD1,DOLK,CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L	IER5L	NA	NA	NA	NA	IER5L	1053	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	131988173	131988389	131988342	Y	NA	IER5L	LOC100506190,IER5L,METTL11A,PPP2R4,ASB6,SH3GLB2,CRAT,C9orf106,C9orf50	IMR90,K562,HELA	Hi-C,5C	24141950,22955621	IER5L	49633	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132040752	132040968	132040856	Y	NA	NA	C9orf106,IER5L,LOC100506190,PPP2R4,CRAT,C9orf50,METTL11A	IMR90,MCF7,HELA,K562	Hi-C,ChIA-PET,5C	24141950,22265404,22955621	RP11-65J3.1	51611	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132168772	132168919	132168823	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	74811	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132175926	132176326	132176076	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	67404	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	132176730	132177172	132176936	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	66558	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132247452	132247693	132247545	Y	C9orf106	LINC00963	NA	NA	NA	NA	LINC00963	3722	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132330921	132331424	132331168	Y	IER5L,C9orf50	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	71020	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chr9	132359283	132359664	132359324	Y	CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L,PTGES,METTL11A,ASB6	ASB6	NA	NA	NA	NA	ASB6	42780	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	132369856	132370376	132370136	Y	CRAT,IER5L,C9orf106,PRRX2,GPR107	ASB6	NA	NA	NA	NA	ASB6	32068	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr9	132494076	132494377	132494232	Y	NA	PTGES	NA	NA	NA	NA	PTGES	18949	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132512351	132512751	132512561	Y	PTGES	PTGES	NA	NA	NA	NA	PTGES	575	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132514052	132514155	132514104	Y	NA	PTGES,TOR1B	NA	NA	NA	NA	PTGES	726	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132539303	132540203	132539702	Y	C9orf106,FNBP1,TOR1B	PTGES,TOR1B,TOR1A	PPP2R4,PRRX2,PTGES,CRAT,IER5L,C9orf50,ASB6,METTL11A,C9orf78,USP20,TOR1B,TOR1A,FAM73B,DOLPP1,LOC100506190,GPR107	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TOR1B	23229	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	132568357	132568650	132568524	Y	TOR1B	TOR1B,TOR1A,USP20,C9orf78	NA	NA	NA	NA	TOR1B	4925	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	133321021	133321306	133321114	Y	ASS1	ASS1	NA	NA	NA	NA	ASS1	2705	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	133565449	133565699	133565571	Y	NA	RP11-57C19.2,EXOSC2,ABL1	NA	NA	NA	NA	EXOSC2	1409	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	133736245	133736518	133736410	Y	ABL1	NA	NA	NA	NA	NA	FIBCD1	76155	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	134131602	134132161	134131829	Y	RAPGEF1,PRRC2B,QRFP,NUP214,FAM78A	PPAPDC3	NA	NA	NA	NA	PPAPDC3	30920	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	134157961	134158264	134158112	Y	NA	PPAPDC3	NUP214,FAM78A,PPAPDC3,PRRC2B	IMR90	Hi-C	24141950	PPAPDC3	4817	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	134248752	134249121	134248943	Y	AIF1L,POMT1,PRRC2B	PRRC2B	PRRC2B,NUP214,FAM78A	IMR90	Hi-C	24141950	PRRC2B	18359	CAGE	1C3IKEI	hg19	FANTOM5	1.83750741626546
chr9	134316967	134317380	134317020	Y	NA	PRRC2B	NA	NA	NA	NA	PRRC2B	49487	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	134532379	134532786	134532611	Y	FAM78A,PRRC2B,RAPGEF1,RAPGEF1	NA	NA	NA	NA	NA	RAPGEF1	80675	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	134608936	134609538	134609242	Y	RAPGEF1,RAPGEF1	RAPGEF1	NA	NA	NA	NA	RAPGEF1	3923	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	134770006	134770262	134770128	Y	NA	NA	NA	NA	NA	NA	RAPGEF1	156545	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	135197315	135197652	135197484	Y	NA	SETX	NA	NA	NA	NA	SETX	30720	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	135460369	135460861	135460532	Y	NA	NA	NA	NA	NA	NA	GTF3C4	82561	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	135991045	135991361	135991245	Y	SLC2A6,RPL7A,RALGDS,RALGDS	RALGDS	NA	NA	NA	NA	RALGDS	45940	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	136001357	136002105	136001796	Y	SLC2A6,RALGDS,RALGDS	RALGDS	NA	NA	NA	NA	RALGDS	35196	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	136009131	136009458	136009277	Y	GTF3C4,DDX31,TSC1,RALGDS	RALGDS	NA	NA	NA	NA	RALGDS	27843	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chr9	136010510	136011124	136011032	Y	RPL7A,RALGDS,RALGDS	RALGDS	NA	NA	NA	NA	RALGDS	26177	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	136236880	136237291	136237149	Y	NA	SURF6,MED22,RPL7A,SURF2,SURF1,SURF4,C9orf96,REXO4	NA	NA	NA	NA	SURF4	3679	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	137264490	137265116	137264820	Y	RXRA	NA	NA	NA	NA	NA	RXRA	57546	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chr9	138915703	138915918	138915811	Y	NA	NA	NA	NA	NA	NA	UBAC1	64477	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	139237317	139237472	139237398	Y	GPSM1	GPSM1,DNLZ	NA	NA	NA	NA	GPSM1	17385	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	140023271	140023604	140023504	Y	EHMT1,ABCA2,PNPLA7,NRARP,ANAPC2	MAN1B1,DPP7,MIR3621	NA	NA	NA	NA	DPP7	15642	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	140023869	140024391	140024239	Y	NA	MAN1B1,DPP7,MIR3621	GRIN1	K562	ChIA-PET	22265404	DPP7	16240	CAGE	1C3IKEI	hg19	FANTOM5	4.90001977670789
chr9	140117588	140118357	140118103	Y	C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1	ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,C9orf169,TUBB4B	NA	NA	NA	NA	C9orf169	501	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chr9	140134697	140134985	140134927	Y	C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3	TPRN,TMEM203,NDOR1,C9orf169,TUBB4B	NA	NA	NA	NA	TUBB4B	1032	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	140163781	140164247	140164025	Y	NA	C9orf169,TUBB4B,NRARP	NA	NA	NA	NA	TUBB4B	30116	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chr9	140306093	140306345	140306289	Y	NRARP	EXD3,NOXA1	NA	NA	NA	NA	EXD3	9369	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	12996273	12996492	12996427	Y	NA	TMSB4X	NA	NA	NA	NA	TMSB4X	5046	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	15493209	15493485	15493347	Y	NA	PIR	NA	NA	NA	NA	PIR	16202	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	19643767	19644028	19643952	Y	SH3KBP1	NA	NA	NA	NA	NA	SH3KBP1	259691	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	39872499	39873023	39872596	Y	NA	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	161559	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	39958407	39958722	39958627	Y	NA	NA	NA	NA	NA	NA	BCOR	75860	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	39964938	39965503	39965246	Y	NA	NA	NA	NA	NA	NA	BCOR	69079	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	39965558	39965902	39965820	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	68680	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	39968308	39968728	39968376	Y	BCOR	NA	NA	NA	NA	NA	BCOR	65854	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	40013089	40013254	40013186	Y	NA	BCOR	NA	NA	NA	NA	BCOR	21328	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	41182589	41182765	41182693	Y	NA	DDX3X	DDX3X	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DDX3X	7886	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	43888590	43889088	43888779	Y	EFHC2	NA	NA	NA	NA	NA	MAOA	375123	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	44168721	44168911	44168853	Y	NA	NA	NA	NA	NA	NA	FUNDC1	231336	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	45376807	45376988	45376867	Y	NA	NA	MIR221,MIR222	IMR90	Hi-C	24141950	MIR221	226706	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	46278987	46279293	46279130	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18856	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	47415526	47415793	47415667	Y	NA	NUS1P1,ARAF,TIMP1	NA	NA	NA	NA	ARAF	2723	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	47492098	47492440	47492261	Y	ARAF,CFP,CFP	SYN1,ELK1,UXT	NA	NA	NA	NA	SYN1	14846	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	52004971	52005124	52005057	Y	NA	NA	NA	NA	NA	NA	MAGED1	460868	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	52964244	52964539	52964367	Y	TSPYL2,KDM5C,IQSEC2,FAM156A	FAM156B	NA	NA	NA	NA	FAM156B	45908	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	53468564	53468782	53468716	Y	IQSEC2	SMC1A,HSD17B10	NA	NA	NA	NA	HSD17B10	9244	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	54665732	54666388	54666226	Y	NA	NA	ITIH6,MAGED2	MCF7	ChIA-PET	22265404	GNL3L	111088	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	67905949	67906235	67906128	Y	NA	NA	NA	NA	NA	NA	EFNB1	140605	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	68004355	68004677	68004478	Y	NA	EFNB1	NA	NA	NA	NA	EFNB1	42163	CAGE	1C3IKEI	hg19	FANTOM5	0.91875370813273
chrX	70275409	70275661	70275633	Y	NA	SNX12,FOXO4	NA	NA	NA	NA	SNX12	10612	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	73237406	73237798	73237506	Y	CHIC1	NA	NA	NA	NA	NA	JPX	75247	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	85294512	85294785	85294645	Y	CHM	CHM	NA	NA	NA	NA	CHM	5781	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	85339971	85340972	85340615	Y	NA	CHM	NA	NA	NA	NA	CHM	39405	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	102063503	102063615	102063509	Y	NA	NA	NA	NA	NA	NA	ARMCX5	211407	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	106920003	106920801	106920325	Y	TSC22D3,TSC22D3	NA	TSC22D3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PRPS1	50266	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	115372300	115372667	115372491	Y	NA	NA	SLC6A14	MCF7	ChIA-PET	22265404	RP11-761E20.1	288878	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	120331489	120331718	120331553	Y	NA	NA	NA	NA	NA	NA	C1GALT1C1	569484	CAGE	1C3IKEI	hg19	FANTOM5	1.53125618022122
chrX	125606277	125607115	125606755	Y	NA	MTND4P24	NA	NA	NA	NA	MTND4P24	1409	CAGE	1C3IKEI	hg19	FANTOM5	1.22500494417697
chrX	128858688	128858914	128858848	Y	NA	NA	XPNPEP2,OCRL,APLN,BCORL1	IMR90	Hi-C	24141950	APLN	71755	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	129066097	129066492	129066260	Y	NA	UTP14A,BCORL1	NA	NA	NA	NA	UTP14A	28000	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	129118011	129118370	129118054	Y	NA	BCORL1	BCORL1,UTP14A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCORL1	4928	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	129400519	129400680	129400638	Y	NA	ZNF280C	NA	NA	NA	NA	ZNF280C	193	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	129961561	129961881	129961697	Y	NA	NA	NA	NA	NA	NA	ENOX2	73327	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	133847905	133848292	133848163	Y	NA	NA	LOC100506757,FAM122B,PLAC1,MIR450A1,MGC16121,MIR542,MIR450A2,MIR450B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM122C	80527	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243
chrX	153828728	153829141	153828914	Y	NA	NA	NA	NA	NA	NA	G6PD	54941	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrX	153829365	153829583	153829391	Y	NA	NA	NA	NA	NA	NA	G6PD	55578	CAGE	1C3IKEI	hg19	FANTOM5	0.612502472088487
chrY	15473779	15474095	15474059	Y	NA	NA	NA	NA	NA	NA	NA	NA	CAGE	1C3IKEI	hg19	FANTOM5	0.306251236044243