chr1 839741 840250 839788 Y NA NA NA NA NA NA NOC2L 52439 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 993498 993878 993664 Y NA ISG15,AGRN,RP11-465B22.3,RNF223 NA NA NA NA RP11-465B22.3 384 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 1173386 1173736 1173661 Y PLEKHN1 SDF4,B3GALT6,UBE2J2,SCNN1D NA NA NA NA B3GALT6 7757 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 1840449 1840835 1840668 Y SKI,ATAD3B,C1orf70,MIB2,MIB2,PRKCZ,GABRD GNB1,TMEM52 NA NA NA NA TMEM52 7877 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 2574343 2574764 2574705 Y MORN1,PANK4,ACTRT2,MMEL1 NA NA NA NA NA FAM213B 58413 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 2772559 2772713 2772636 Y HES5 NA PRDM16 IMR90 Hi-C 24141950 FAM213B 256629 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 3229711 3230157 3229865 Y NA NA NA NA NA NA ARHGEF16 138833 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 3231111 3231335 3231228 Y NA NA NA NA NA NA ARHGEF16 137655 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 3237165 3237518 3237290 Y NA NA NA NA NA NA ARHGEF16 131472 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 3269112 3269418 3269330 Y NA NA NA NA NA NA ARHGEF16 99572 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 3817648 3818071 3817969 Y LRRC47 CEP104,DFFB,C1orf174 NA NA NA NA C1orf174 2791 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 6034742 6034859 6034801 Y NA NPHP4 NA NA NA NA NPHP4 15674 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 7461964 7462325 7462107 Y NA NA NA NA NA NA VAMP3 367004 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 7764543 7764931 7764717 Y PER3 NA NA NA NA NA VAMP3 64398 CAGE GSS hg19 FANTOM5 3.04909636202097 chr1 8070132 8070398 8070299 Y PER3,SLC45A1,ERRFI1 ERRFI1,RP11-431K24.1 NA NA NA NA ERRFI1 13970 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 8173446 8173525 8173493 Y NA NA ERRFI1,RERE,SLC45A1 IMR90 Hi-C 24141950 RP11-431K24.1 88648 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 8198088 8198334 8198235 Y NA NA ERRFI1,SLC45A1,RERE,PARK7 IMR90 Hi-C 24141950 RNU1-7P 66323 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 8254637 8254907 8254798 Y NA RNU1-7P ERRFI1,PARK7,RERE,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNU1-7P 9750 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 8262223 8262541 8262360 Y ERRFI1 RNU1-7P ERRFI1,PARK7,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNU1-7P 2116 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 10245595 10245867 10245731 Y NA KIF1B NA NA NA NA KIF1B 22996 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 10700424 10700580 10700499 Y NA NA NA NA NA NA DFFA 169841 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 10997518 10997835 10997575 Y CASZ1 NA NA NA NA NA TARDBP 72579 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 12233600 12234159 12233938 Y AGTRAP,MTHFR,CLCN6,TNFRSF8,TNFRSF1B,VPS13D TNFRSF1B NA NA NA NA TNFRSF1B 8540 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 15416988 15417263 15417153 Y NA NA NA NA NA NA TMEM51 59765 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 16502532 16502678 16502612 Y C1orf64 NA CLCNKA,HSPB7,C1orf64,CLCNKB,FAM131C,EPHA2,ARHGEF19,FBXO42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM131C 104405 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 16696032 16696399 16696223 Y NA FBXO42 NA NA NA NA FBXO42 19083 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 16825333 16826291 16825792 Y NA NA SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 NECAP2 60166 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 17027024 17027386 17027173 Y NA CROCC NA NA NA NA CROCC 37382 CAGE GSS hg19 FANTOM5 6.86046681454718 chr1 17231253 17231704 17231392 Y PADI4,PADI2 NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MFAP2 73626 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 17240188 17240783 17240515 Y NA NA CROCC K562 ChIA-PET 22265404 MFAP2 64547 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 21428050 21428147 21428101 Y NA NA NA NA NA NA EIF4G3 73230 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 23123668 23124069 23123697 Y NA NA NA NA NA NA EPHB2 88336 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 23881180 23881765 23881497 Y NA E2F2,ID3 E2F2 IMR90 Hi-C 24141950 ID3 2520 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 24229023 24229388 24229190 Y NA FUCA1 NA NA NA NA FUCA1 36239 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 24890021 24890356 24890213 Y C1orf130 NA NA NA NA NA RCAN3 62634 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 25425738 25426059 25426056 Y NA NA RUNX3,IL22RA1,CLIC4,SRRM1,SYF2 IMR90 Hi-C 24141950 SYF2 130934 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 26827232 26827869 26827508 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 30291 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 26947342 26948198 26947481 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 72326 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 27024638 27025138 27024825 Y SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV ARID1A NA NA NA NA ARID1A 4114 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 27191386 27191927 27191661 Y FAM46B,C1orf172,HMGN2,RPS6KA1,SFN,NUDC,GPN2 ZDHHC18,SFN,GPN2,NUDC,GPATCH3 NA NA NA NA SFN 3753 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 27561705 27561803 27561716 Y NA WDTC1 NA NA NA NA WDTC1 2698 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 27691785 27692261 27692091 Y TMEM222,MAP3K6 TMEM222,RP11-4K3__A.5,SYTL1,MAP3K6,GPR3 NA NA NA NA MAP3K6 402 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 27772061 27772370 27772216 Y NA WASF2 NA NA NA NA WASF2 42299 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 27901397 27901604 27901422 Y NA AHDC1 NA NA NA NA AHDC1 27338 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 28573636 28574084 28573917 Y NA DNAJC8,ATPIF1,SESN2 NA NA NA NA SESN2 9954 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 29195388 29195583 29195486 Y OPRD1 EPB41 NA NA NA NA EPB41 16020 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 29451057 29451462 29451431 Y TMEM200B,TMEM200B NA NA NA NA NA SRSF4 55037 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 31320336 31320627 31320524 Y NA NA SDC3 K562 ChIA-PET 22265404 SDC3 58981 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 31537719 31538012 31537814 Y LAPTM5,PUM1 PUM1 NA NA NA NA PUM1 881 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 31628220 31628457 31628359 Y NA NA PUM1,NKAIN1,SERINC2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NKAIN1 81944 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 31943761 31943827 31943813 Y NA NA SERINC2,SNRNP40,NKAIN1,ZCCHC17,FABP3,LOC149086,LOC284551,TINAGL1,PEF1,SPOCD1,HCRTR1 IMR90 Hi-C 24141950 SERINC2 63349 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 36626561 36626969 36626609 Y STK40,SH3D21,LSM10,CSF3R,EIF2C4,EIF2C1,EIF2C3,ADPRHL2,MAP7D1,THRAP3 TRAPPC3,MAP7D1 NA NA NA NA MAP7D1 7381 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 36866636 36866899 36866720 Y LSM10 STK40,LSM10,OSCP1 NA NA NA NA LSM10 5143 CAGE GSS hg19 FANTOM5 3.81137045252621 chr1 39508832 39509204 39509012 Y NA NDUFS5,MACF1 NA NA NA NA NDUFS5 18842 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 40283075 40283206 40283146 Y PABPC4,RLF,MFSD2A BMP8B MYCL1 K562 ChIA-PET 22265404 BMP8B 30542 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 41961925 41962146 41962029 Y NA EDN2 NA NA NA NA EDN2 13581 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 41981831 41982007 41981926 Y SLFNL1,SLFNL1 EDN2 NA NA NA NA EDN2 33487 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 43388597 43388971 43388887 Y NA SLC2A1 NA NA NA NA SLC2A1 33559 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 43428386 43429108 43428580 Y CLDN19,CCDC23,ERMAP,SLC2A1 SLC2A1 NA NA NA NA SLC2A1 5856 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 43473183 43473398 43473279 Y C1orf210,C1orf210,SLC2A1 NA NA NA NA NA SLC2A1 50653 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 44452990 44453115 44453039 Y NA RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24 NA NA NA NA CCDC24 1916 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 44495684 44496307 44495779 Y NA CCDC24 B4GALT2 MCF7 ChIA-PET 22265404 CCDC24 40653 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 46111666 46112048 46111975 Y NA TMEM69,GPBP1L1 NA NA NA NA TMEM69 38838 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 58969564 58969575 58969570 Y NA DAB1,OMA1 NA NA NA NA DAB1 40831 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 61333622 61333797 61333765 Y NA NFIA INADL IMR90 Hi-C 24141950 NFIA 4691 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 63807580 63807600 63807590 Y NA RP4-792G4.2,ALG6 NA NA NA NA RP4-792G4.2 19468 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 68961350 68961555 68961472 Y NA DEPDC1 NA NA NA NA DEPDC1 446 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 75182913 75182976 75182918 Y NA TYW3,CRYZ NA NA NA NA TYW3 13860 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 77879256 77879430 77879369 Y NA NA NA NA NA NA PIGK 196141 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 79215772 79216132 79215819 Y NA NA NA NA NA NA DNAJB4 772913 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 85038681 85038996 85038864 Y MCOLN2,GNG5,CTBS CTBS NA NA NA NA CTBS 518 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 85695505 85695602 85695542 Y NA C1orf52,BCL10 NA NA NA NA C1orf52 27753 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 89358212 89358439 89358316 Y PKN2,CCBL2 GTF2B NA NA NA NA GTF2B 2585 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 98011760 98012364 98012119 Y NA NA NA NA NA NA PTBP2 826539 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 108231996 108232161 108232053 Y NA NA NA NA NA NA SLC25A24 509310 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 110320163 110320291 110320225 Y NA GSTM3,EPS8L3 CSF1,AHCYL1,CYB561D1,ATXN7L2,GPR61,GNAI3,AMIGO1,AMPD2,GNAT2,GSTM4,GSTM5,EPS8L3,FAM40A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EPS8L3 15514 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 110358971 110359415 110359330 Y GNAI3,AMPD2 NA CSF1,AHCYL1 IMR90 Hi-C 24141950 EPS8L3 54322 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 110963862 110964269 110963971 Y CD53 LAMTOR5-AS1 SLC16A4,LOC440600,HBXIP,ALX3,KCNC4,SLC6A17,RBM15,PROK1,CYMP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LAMTOR5-AS1 40421 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 111255928 111256180 111256068 Y LRIF1,CD53 NA KCNA2,KCNA3 IMR90 Hi-C 24141950 LRIF1 248521 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 113394964 113395159 113395070 Y NA RP3-522D1.1,RP11-426L16.8 FAM19A3,PPM1J IMR90 Hi-C 24141950 RP11-426L16.8 3699 CAGE GSS hg19 FANTOM5 3.04909636202097 chr1 114244987 114245321 114245197 Y NA NA NA NA NA NA PHTF1 54790 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 115052481 115052766 115052572 Y BCAS2,TRIM33 TRIM33 NA NA NA NA TRIM33 700 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 116694646 116694883 116694753 Y NA NA NA NA NA NA SLC22A15 177527 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 121485082 121485212 121485187 Y NA NA NA NA NA NA HIST2H2BA 581054 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 145396760 145397198 145397044 Y NA RP11-458D21.1,RNVU1-6,TXNIP LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNVU1-6 16003 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 146774989 146775112 146775013 Y NA NA NA NA NA NA CHD1L 62698 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 147080043 147080251 147080097 Y PRKAB2,CHD1L,BCL9 NA NA NA NA NA ACP6 60367 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 151184646 151184728 151184696 Y NA LYSMD1,VPS72,PIP5K1A,PSMD4 NA NA NA NA PIP5K1A 16221 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 151868154 151868386 151868273 Y NA THEM4 NA NA NA NA THEM4 11898 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 153818420 153818667 153818544 Y NA NA NA NA NA NA SLC27A3 73590 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 154405619 154406249 154405788 Y UBAP2L,C1orf43,UBAP2L,IL6R,ADAR IL6R NA NA NA NA IL6R 29950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 154957258 154957622 154957425 Y NA PMVK,PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B NA NA NA NA FLAD1 3444 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 154973335 154973935 154973656 Y ADAR,ADAR,MTX1,SHC1,ZBTB7B PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15 NA NA NA NA ZBTB7B 208 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 155164183 155164959 155164537 Y NA TRIM46,KRTCAP2,MUC1,MIR92B,MTX1,THBS3,GBAP1,GBA NA NA NA NA MIR92B 1215 CAGE GSS hg19 FANTOM5 3.04909636202097 chr1 155946363 155946660 155946476 Y ASH1L,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,SLC25A44,RIT1,KIAA0907,ARHGEF2,ARHGEF2 KIAA0907,ARHGEF2,SSR2 RXFP4,KIAA0907 K562 ChIA-PET 22265404 ARHGEF2 28201 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 156066868 156067143 156067009 Y MEF2D,MSTO1,YY1AP1,YY1AP1,YY1AP1,GON4L UBQLN4,LAMTOR2,MEX3A,LMNA LMNA,MEX3A K562,MCF7 ChIA-PET 22265404 LMNA 16504 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 156676478 156676824 156676750 Y C1orf85,PEAR1,CRABP2,CRABP2 RP11-284F21.7,NES,CRABP2,RRNAD1,ISG20L2,MRPL24,PRCC NA NA NA NA CRABP2 2870 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 158146699 158147069 158146946 Y NA NA NA NA NA NA KIRREL 185636 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 161359666 161360218 161359899 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 77619 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 161369073 161369991 161369486 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 87026 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 165635693 165636148 165635824 Y NA MGST3,ALDH9A1 NA NA NA NA ALDH9A1 29952 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 167191021 167191933 167191618 Y NA POU2F1 NA NA NA NA POU2F1 2955 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 167419889 167420655 167420276 Y POU2F1,RCSD1,CD247 NA NA NA NA NA CREG1 100349 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 167586596 167587245 167587123 Y POU2F1,POU2F1,CD247,RCSD1 NA RCSD1 IMR90 Hi-C 24141950 CREG1 65592 CAGE GSS hg19 FANTOM5 6.09819272404193 chr1 168409627 168409736 168409651 Y NA NA F5 IMR90 Hi-C 24141950 TBX19 161349 CAGE GSS hg19 FANTOM5 34.3023340727359 chr1 169071998 169072131 169072049 Y C1orf114,ATP1B1 ATP1B1 NA NA NA NA ATP1B1 804 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 175145439 175145838 175145619 Y KIAA0040,KIAA0040 KIAA0040 NA NA NA NA KIAA0040 14297 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 179726041 179726329 179726185 Y TDRD5,FAM163A NA NA NA NA NA TOR1AIP2 118609 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 180613229 180613603 180613357 Y NA XPR1 NA NA NA NA XPR1 14089 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 181069151 181069617 181069305 Y NA IER5 NA NA NA NA IER5 13513 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 183386078 183386213 183386099 Y NA NA NA NA NA NA SMG7 53138 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 184005350 184005919 184005662 Y RGL1,GLT25D2 TSEN15 RGL1 IMR90 Hi-C 24141950 TSEN15 12892 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 186818504 186818763 186818666 Y PTGS2,PLA2G4A NA NA NA NA NA C1orf27 475614 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 187364832 187365131 187364982 Y NA NA NA NA NA NA C1orf27 1021942 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 198903935 198904934 198904858 Y PTPRC NA NA NA NA NA NEK7 779842 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 200622357 200622464 200622411 Y NA KIF14,DDX59 NA NA NA NA DDX59 14633 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 201139670 201140154 201139905 Y NA TMEM9 KIF21B,IGFN1,LAD1 IMR90 Hi-C 24141950 TMEM9 968 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 201494461 201494578 201494476 Y NA RP11-134G8.7,CSRP1 NA NA NA NA CSRP1 17877 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 202054141 202054434 202054309 Y NA NA ELF3,IPO9,RNPEP,ARL8A,GPR37L1,TIMM17A,LGR6,NAV1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARL8A 57435 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 202823240 202823502 202823372 Y NA KDM5B,PCAT6,RABIF PPP1R12B,KDM5B,LOC641515,KLHL12,ADIPOR1,LOC148709,RABIF,CYB5R1,TMEM183A,LOC401980,SYT2 IMR90 Hi-C 24141950 RABIF 32761 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 203101073 203101246 203101163 Y NA NA NA NA NA NA PPFIA4 107447 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 203561987 203562359 203562082 Y BTG2,ZC3H11A NA ATP2B4,OPTC,PRELP,FMOD,LAX1 IMR90 Hi-C 24141950 OPTC 100716 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 204049581 204049822 204049645 Y LAX1,PIK3C2B,SOX13 SOX13 NA NA NA NA SOX13 9338 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 205254805 205255191 205255039 Y RAB7L1,RBBP5,NUAK2,DSTYK NUAK2 NA NA NA NA NUAK2 33692 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 205442172 205442546 205442359 Y CNTN2,TMEM81 LEMD1,CDK18 KLHDC8A,NUAK2,MIR135B,LOC284576,LEMD1,CDK18 IMR90 Hi-C 24141950 LEMD1 19090 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 205638734 205639222 205638979 Y SLC45A3 ELK4,SLC45A3 NA NA NA NA SLC45A3 8365 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 208136912 208137268 208137107 Y NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C1orf132 96417 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 210425971 210426288 210426079 Y NA NA NA NA NA NA HHAT 73308 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 211500826 211501119 211501083 Y TRAF5,TRAF5 TRAF5 NA NA NA NA TRAF5 2869 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 212513330 212513719 212513465 Y PPP2R5A,PPP2R5A,TMEM206,TMEM206 NA NA NA NA NA PPP2R5A 56451 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 212654863 212655019 212654879 Y ATF3,ATF3,ATF3 NA ATF3,FAM71A,ANGEL2,NENF,BATF3,TATDN3,NSL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 NENF 50634 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 214163432 214163790 214163677 Y NA PROX1 NA NA NA NA PROX1 8908 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 215741534 215741966 215741880 Y KCTD3 KCTD3 NA NA NA NA KCTD3 2799 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 216823711 216823952 216823948 Y ESRRG NA NA NA NA NA ESRRG 485145 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 219497639 219497836 219497817 Y NA NA TGFB2,LOC728463,RRP15 IMR90 Hi-C 24141950 LYPLAL1 152453 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 220427006 220427444 220427299 Y NA MORF4L1P1,RAB3GAP2 NA NA NA NA MORF4L1P1 2094 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 220443411 220443639 220443413 Y NA MORF4L1P1,RAB3GAP2 NA NA NA NA RAB3GAP2 157 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 221881394 221881826 221881629 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 31692 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 221916049 221916599 221916319 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 2531 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 223925260 223925580 223925340 Y NA CAPN2 NA NA NA NA CAPN2 37965 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 224180261 224180516 224180350 Y NA NA NA NA NA NA FBXO28 119273 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 224458940 224459060 224459002 Y NA NA NA NA NA NA NVL 57029 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 226435130 226435332 226435236 Y PARP1,LIN9,SRP9,PYCR2,H3F3A NA NA NA NA NA LIN9 60238 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 226443007 226443187 226443097 Y NA NA NA NA NA NA LIN9 52383 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 226890865 226891416 226891300 Y ITPKB NA NA NA NA NA C1orf95 156364 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 228783266 228783899 228783495 Y C1orf35,TRIM11,HIST3H2A,RHOU FTH1P2 NA NA NA NA FTH1P2 37263 CAGE GSS hg19 FANTOM5 1.52454818101048 chr1 228987774 228988279 228988087 Y NA NA NA NA NA NA RHOU 118950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 234728712 234729023 234728867 Y NA IRF2BP2 NA NA NA NA IRF2BP2 14248 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 234748100 234748931 234748566 Y IRF2BP2 IRF2BP2 NA NA NA NA IRF2BP2 4829 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 235242252 235242564 235242410 Y IRF2BP2,ARID4B,ARID4B TOMM20 IRF2BP2 MCF7 ChIA-PET 22265404 TOMM20 47687 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 235267591 235267744 235267678 Y NA TOMM20 NA NA NA NA TOMM20 22507 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 236431064 236431243 236431072 Y LGALS8,ERO1LB ERO1LB NA NA NA NA ERO1LB 12076 CAGE GSS hg19 FANTOM5 2.28682227151573 chr1 236764383 236764568 236764551 Y NA HEATR1 NA NA NA NA HEATR1 1236 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 240308207 240308537 240308375 Y NA ADH5P3 NA NA NA NA ADH5P3 22918 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 243585242 243585384 243585313 Y CEP170,AKT3,AKT3 NA NA NA NA NA SDCCAG8 167922 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 244215508 244215901 244215527 Y AKT3,ZNF238,ZNF238 NA NA NA NA NA AKT3 203127 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 246147829 246148201 246147973 Y NA NA NA NA NA NA SMYD3 520413 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 246749077 246749442 246749258 Y CNST TFB2M,CNST NA NA NA NA CNST 21331 CAGE GSS hg19 FANTOM5 0.762274090505242 chr1 249157308 249157673 249157562 Y OR14I1,ZNF672,ZNF692,ZNF692 SH3BP5L,ZNF672,ZNF692,PGBD2 NA NA NA NA ZNF692 5965 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 1241708 1242051 1241875 Y NA NA NA NA NA NA WDR37 148230 CAGE GSS hg19 FANTOM5 12.1963854480839 chr10 3284966 3285255 3285136 Y NA NA LOC100216001,LOC338588,KLF6 IMR90 Hi-C 24141950 PITRM1 71963 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 3889000 3889222 3889111 Y NA NA KLF6,LOC100216001,LOC338588 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 KLF6 63527 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 4283808 4284356 4284092 Y NA NA KLF6,LOC100216001,LOC338588 IMR90 Hi-C 24141950 KLF6 458335 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 6242613 6242903 6242648 Y IL15RA,PFKFB3,PFKFB3 NA NA NA NA NA PFKFB3 57732 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 6243287 6243821 6243659 Y PFKFB3,PFKFB3 NA NA NA NA NA PFKFB3 58406 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 14641847 14641963 14641950 Y NA NA NA NA NA NA FAM107B 172933 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 15191044 15191371 15191092 Y MEIG1,NMT2,C10orf111 NMT2 NA NA NA NA NMT2 17321 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 15300658 15300993 15300826 Y ACBD7,FAM171A1 NA NA NA NA NA NMT2 91966 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 17467799 17468377 17468085 Y STAM,ST8SIA6 ST8SIA6-AS1 NA NA NA NA ST8SIA6-AS1 40864 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 21333319 21333508 21333415 Y NEBL,C10orf113 NA NA NA NA NA NEBL 127608 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 21816029 21816444 21816223 Y NA MLLT10 NA NA NA NA MLLT10 4650 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 22961361 22961802 22961720 Y NA PIP4K2A NA NA NA NA PIP4K2A 39682 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 24858253 24858468 24858359 Y NA NA NA NA NA NA ARHGAP21 152129 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 24925603 24925785 24925693 Y ARHGAP21 NA NA NA NA NA ARHGAP21 84812 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 28957755 28957993 28957831 Y BAMBI BAMBI BAMBI K562 ChIA-PET 22265404 BAMBI 6278 CAGE GSS hg19 FANTOM5 4.57364454303145 chr10 29228763 29229094 29228981 Y NA NA BAMBI,LOC100507605,LYZL1 IMR90 Hi-C 24141950 BAMBI 264492 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 29970673 29971027 29970896 Y SVIL NA NA NA NA NA PTCHD3P1 274342 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 32048872 32049424 32049213 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166318 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 33269452 33269916 33269602 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 22804 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 35080769 35081009 35080876 Y NA PARD3 NA NA NA NA PARD3 21244 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 42389884 42390116 42390007 Y NA NA NA NA NA NA CCNYL2 575572 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 43633157 43633403 43633253 Y RASGEF1A CSGALNACT2 NA NA NA NA CSGALNACT2 1223 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 43950893 43951349 43951098 Y NA HNRNPF,RP11-517P14.2 NA NA NA NA RP11-517P14.2 36707 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 44046358 44046416 44046387 Y NA ZNF239 NA NA NA NA ZNF239 21650 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 52217733 52218081 52217894 Y NA NA NA NA NA NA SGMS1 164842 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 52329586 52329716 52329651 Y NA NA NA NA NA NA SGMS1 53207 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 52385542 52385659 52385602 Y NA SGMS1 NA NA NA NA SGMS1 2619 CAGE GSS hg19 FANTOM5 2.28682227151573 chr10 63752119 63752912 63752632 Y ARID5B NA NA NA NA NA ARID5B 93060 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 64024468 64024613 64024559 Y ARID5B RTKN2 NA NA NA NA RTKN2 1853 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 65149197 65149230 65149214 Y NA NA NA NA NA NA JMJD1C 74492 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 65389747 65390882 65390384 Y NA NA NA NA NA NA REEP3 110624 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 69523317 69523417 69523404 Y NA NA NA NA NA NA DNAJC12 72507 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 72124245 72124646 72124446 Y NA LRRC20,EIF4EBP2 NA NA NA NA LRRC20 15736 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 73790594 73790943 73790840 Y NA NA NA NA NA NA RP11-570G20.1 156756 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 74032298 74032943 74032475 Y NA DDIT4 NA NA NA NA DDIT4 620 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 74079380 74080359 74079580 Y PSAP,DDIT4,DNAJB12 DDIT4,DNAJB12 DDIT4,ANAPC16 IMR90 Hi-C 24141950 DNAJB12 32629 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 74085147 74085316 74085305 Y NA DNAJB12 NA NA NA NA DNAJB12 27672 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 74327257 74327510 74327437 Y DDIT4,DNAJB12 NA NA NA NA NA MICU1 56389 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 74917588 74917679 74917634 Y NA NUDT13,FAM149B1,ECD NA NA NA NA FAM149B1 8245 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 74990824 74990933 74990931 Y NA DNAJC9,MRPS16,RP11-152N13.5 NA NA NA NA DNAJC9 15687 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 76866248 76866511 76866390 Y NA SAMD8 NA NA NA NA SAMD8 8904 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 77155063 77155414 77155221 Y NA ZNF503 NA NA NA NA ZNF503 4250 CAGE GSS hg19 FANTOM5 1.52454818101048 chr10 80732492 80734123 80733460 Y ZMIZ1,PPIF NA NA NA NA NA ZMIZ1 92669 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 80997251 80997825 80997438 Y ZMIZ1,PPIF NA NA NA NA NA PPIF 107400 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 80998898 81000011 80999247 Y ZMIZ1,PPIF NA NA NA NA NA PPIF 105214 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 86093705 86094297 86093848 Y NA NA NA NA NA NA RGR 90896 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 86104605 86104727 86104619 Y NA NA NA NA NA NA RGR 101796 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 87545256 87545357 87545307 Y NA NA NA NA NA NA WAPAL 734215 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 88160011 88160294 88160175 Y NA NA WAPAL MCF7 ChIA-PET 22265404 WAPAL 119278 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 88470805 88471213 88471023 Y NA BMPR1A NA NA NA NA BMPR1A 43194 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 90643265 90643581 90643488 Y LIPK,FAS,STAMBPL1 NA ACTA2 IMR90 Hi-C 24141950 IFIT1 506722 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 94351391 94351691 94351485 Y CPEB3 IDE,KIF11 NA NA NA NA KIF11 348 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 94353992 94354203 94354151 Y MARCH5 IDE,KIF11 NA NA NA NA KIF11 2949 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 95195782 95196689 95196040 Y MYOF MYOF NA NA NA NA MYOF 43385 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 95196959 95197603 95197264 Y NA MYOF NA NA NA NA MYOF 42471 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 101475394 101475766 101475528 Y NA CUTC,COX15 NA NA NA NA COX15 14091 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 102284617 102284981 102284927 Y NA HIF1AN,SEC31B,NDUFB8 NA NA NA NA HIF1AN 1848 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 104401686 104402330 104401988 Y NA NA NA NA NA NA TRIM8 0 CAGE GSS hg19 FANTOM5 3.04909636202097 chr10 104683249 104683568 104683410 Y NA CNNM2 NA NA NA NA CNNM2 7199 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 104909684 104910071 104909878 Y NA NT5C2 NA NA NA NA NT5C2 40985 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 105532054 105532211 105532109 Y NA NA NA NA NA NA OBFC1 143752 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 111981639 111982026 111981734 Y ADD3,MXI1,MXI1 MXI1 SMNDC1 IMR90 Hi-C 24141950 MXI1 16276 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 112401121 112401469 112401220 Y SMC3,RBM20 NA NA NA NA NA SMC3 75672 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 114847181 114847492 114847280 Y TCF7L2 NA NA NA NA NA TCF7L2 139172 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 114859283 114859636 114859547 Y TCF7L2 NA NA NA NA NA TCF7L2 151274 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 115923622 115923898 115923760 Y C10orf81 MIR2110,C10orf118,TDRD1 NA NA NA NA MIR2110 8040 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 116255200 116255589 116255576 Y NA NA NA NA NA NA AFAP1L2 92685 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 123822805 123823045 123822957 Y ATE1,DMBT1 NA NA NA NA NA TACC2 76116 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 126329186 126329692 126329619 Y CHST15,ZRANB1,FAM53B NA NA NA NA NA FAM53B 101146 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 126445536 126445891 126445571 Y ZRANB1 FAM53B,METTL10,FAM175B NA NA NA NA FAM53B 14698 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 129948422 129948582 129948473 Y NA MKI67 FAM196A,DOCK1,CLRN3,PTPRE,MKI67,GLRX3 IMR90 Hi-C 24141950 MKI67 25773 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 133763722 133764008 133763747 Y NA NA NA NA NA NA STK32C 379343 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 133879247 133879524 133879406 Y NA NA BNIP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STK32C 263827 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 134260341 134260546 134260485 Y C10orf91 C10orf91 NA NA NA NA C10orf91 4510 CAGE GSS hg19 FANTOM5 0.762274090505242 chr10 135074691 135075148 135074934 Y TUBGCP2,ADAM8 ZNF511,TUBGCP2 NA NA NA NA ZNF511 44831 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 355877 356724 356385 Y NA IFITM3,B4GALNT4,PKP3 IFITM1,IFITM2,RIC8A,BET1L,ATHL1,PKP3 K562,MCF7 ChIA-PET 22265404 B4GALNT4 11072 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 741538 741804 741722 Y IRF7,IRF7 TMEM80,DEAF1,TALDO1,PDDC1,AP006621.5 NA NA NA NA TALDO1 3525 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 1404202 1404317 1404259 Y IFITM10,DUSP8 BRSK2 TOLLIP,LOC255512,MUC5B,BRSK2,MOB2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BRSK2 4812 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 1404403 1404794 1404637 Y DUSP8,BRSK2 BRSK2 TOLLIP,LOC255512,MUC5B,BRSK2,MOB2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BRSK2 4335 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 1568333 1568421 1568379 Y BRSK2,KRTAP5-3,DUSP8 DUSP8 NA NA NA NA DUSP8 22729 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 1851395 1851620 1851555 Y NA SYT8 NA NA NA NA SYT8 4686 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 1863948 1864140 1864052 Y IFITM10,TNNI2 SYT8 NA NA NA NA SYT8 17239 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 1989837 1990190 1989954 Y IGF2,TSSC4,TH,IGF2,IGF2 MRPL23,H19 NA NA NA NA MRPL23 23329 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 2200082 2200579 2200535 Y SYT8,ASCL2,IGF2,TH IGF2-AS,IGF2 NA NA NA NA IGF2 31249 CAGE GSS hg19 FANTOM5 7.62274090505242 chr11 2223798 2223980 2223871 Y ASCL2 NA NA NA NA NA IGF2 54965 CAGE GSS hg19 FANTOM5 3.04909636202097 chr11 2238430 2238670 2238577 Y NA NA KCNQ1 IMR90 Hi-C 24141950 ASCL2 51512 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 2717684 2718130 2717946 Y TSSC4,TRPM5,KCNQ1 KCNQ1OT1 NA NA NA NA KCNQ1OT1 1094 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 2847671 2847794 2847733 Y CDKN1C NA NA NA NA NA CDKN1C 57317 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 2988914 2989223 2989024 Y MRGPRG,SLC22A18 PHLDA2,NAP1L4 NA NA NA NA NAP1L4 22384 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 3035655 3035952 3035816 Y MRGPRG NAP1L4,CARS NA NA NA NA NAP1L4 24048 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 3175519 3175620 3175572 Y NA OSBPL5 NA NA NA NA OSBPL5 10349 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 3180503 3180713 3180608 Y ART1 OSBPL5 NA NA NA NA OSBPL5 5256 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 8632537 8632549 8632543 Y ASCL3 STK33 NA NA NA NA STK33 18701 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 9310546 9310889 9310715 Y ZNF143,NRIP3,DENND5A,TMEM41B DENND5A,TMEM41B NA NA NA NA TMEM41B 23438 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 9385760 9386326 9386092 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 17843 CAGE GSS hg19 FANTOM5 5.33591863353669 chr11 9590279 9590748 9590469 Y WEE1,WEE1 WEE1 LOC644656,ZNF143 K562,MCF7 ChIA-PET 22265404 WEE1 2480 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 9635436 9636077 9635827 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 42208 CAGE GSS hg19 FANTOM5 6.09819272404193 chr11 9639557 9639822 9639717 Y WEE1 WEE1,SWAP70 LOC283104,LOC440028,SBF2,SWAP70,ZNF143 IMR90 Hi-C 24141950 SWAP70 43802 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 9787824 9788205 9787956 Y NA NA NA NA NA NA SWAP70 104200 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 10060683 10060760 10060722 Y SBF2,AMPD3,AMPD3,AMPD3 NA NA NA NA NA SBF2 252994 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 10549004 10549441 10549205 Y AMPD3,AMPD3,MRVI1,MRVI1,RNF141 MTRNR2L8,RNF141 NA NA NA NA RNF141 11336 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 11378547 11378930 11378792 Y NA NA NA NA NA NA USP47 482040 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 11641691 11641934 11641813 Y GALNTL4 NA NA NA NA NA USP47 219036 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 12697923 12698543 12698251 Y PARVA,TEAD1 TEAD1 NA NA NA NA TEAD1 3954 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 14356156 14356413 14356247 Y NA RRAS2 NA NA NA NA RRAS2 27639 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 16625688 16626709 16626131 Y SOX6,SOX6 C11orf58 SOX6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C11orf58 5970 CAGE GSS hg19 FANTOM5 2.28682227151573 chr11 17164162 17164523 17164517 Y NA NA NA NA NA NA PIK3C2A 63007 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 19081495 19081694 19081555 Y MRGPRX2 NA NA NA NA NA ZDHHC13 54952 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 22631991 22632283 22632136 Y NA AC103801.2,FANCF NA NA NA NA AC103801.2 12577 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 27350498 27350718 27350608 Y BDNF CCDC34 NA NA NA NA CCDC34 32697 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 32915475 32916456 32915913 Y NA QSER1 NA NA NA NA QSER1 2751 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 35334751 35335300 35335020 Y CD44 NA NA NA NA NA TRIM44 347053 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 38210456 38210607 38210524 Y NA NA NA NA NA NA C11orf74 1596405 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 43360196 43360553 43360375 Y TTC17 API5,TTC17 NA NA NA NA TTC17 17929 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 44341406 44341701 44341459 Y ALX4 NA EXT2,ALX4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 EXT2 226307 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 44963197 44963482 44963283 Y NA TP53I11 NA NA NA NA TP53I11 7358 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 45201958 45202605 45202216 Y NA NA NA NA NA NA TP53I11 231118 CAGE GSS hg19 FANTOM5 3.04909636202097 chr11 46264726 46265198 46265009 Y NA NA DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DGKZ 87257 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 47168963 47169205 47169084 Y NA ARFGAP2,PACSIN3 NA NA NA NA ARFGAP2 27471 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 48163334 48163507 48163430 Y OR4C45,OR4B1,OR4X2,OR4S1,FNBP4,PTPRJ NA NA NA NA NA PTPRJ 163221 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 57083068 57083441 57083322 Y NA TNKS1BP1,SSRP1 NA NA NA NA TNKS1BP1 6985 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 63949132 63949273 63949224 Y NA MACROD1,STIP1,NUDT22,TRPT1,DNAJC4 NA NA NA NA STIP1 1471 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 64140304 64140795 64140552 Y RCOR2,NAA40,GPR137,KCNK4,NRXN2,NRXN2,CDC42BPG RPS6KA4 NA NA NA NA RPS6KA4 15684 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 64363562 64364093 64364079 Y NA NA NA NA NA NA NRXN2 124567 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 65184888 65185395 65184991 Y FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 2850 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 65187297 65188198 65187553 Y BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 47 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 65244638 65245303 65245021 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 AP000769.1,MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 17930 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 65254949 65255610 65255242 Y NA AP000769.1,MALAT1,SCYL1 MALAT1,FRMD8,NEAT1,MIR612 IMR90 Hi-C 24141950 MALAT1 7623 CAGE GSS hg19 FANTOM5 3.04909636202097 chr11 65259217 65259522 65259389 Y NA AP000769.1,MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 3711 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 65264635 65265953 65265057 Y NA AP000769.1,MALAT1,SCYL1 NA NA NA NA MALAT1 1402 CAGE GSS hg19 FANTOM5 16.0077559006101 chr11 65328084 65328375 65328271 Y NA SCYL1,LTBP3,SSSCA1,FAM89B,EHBP1L1 NA NA NA NA LTBP3 3683 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 65666492 65667203 65666864 Y RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B MUS81,CFL1,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1 NA NA NA NA FOSL1 448 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 65683105 65683625 65683322 Y NA FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1 NA NA NA NA C11orf68 963 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 66494780 66495327 66494982 Y SYT12,SYT12,PC,PC,SPTBN2 C11orf80 C11orf80 MCF7,K562 ChIA-PET 22265404 C11orf80 14595 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 68238826 68238975 68238901 Y TCIRG1,TCIRG1,CHKA,SUV420H1,IGHMBP2,PPP6R3 PPP6R3 NA NA NA NA PPP6R3 12640 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 68921150 68921435 68921292 Y NA NA ORAOV1,CCND1,FGF19 IMR90 Hi-C 24141950 TPCN2 106785 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 68922905 68923104 68922954 Y NA NA ORAOV1,CCND1,FGF19 IMR90 Hi-C 24141950 TPCN2 108540 CAGE GSS hg19 FANTOM5 51.0723640638512 chr11 68924761 68925032 68924956 Y TPCN2 NA ORAOV1,CCND1,MYEOV IMR90 Hi-C 24141950 TPCN2 110396 CAGE GSS hg19 FANTOM5 8.38501499555766 chr11 69089155 69089700 69089444 Y MRGPRD MYEOV CCND1 MCF7 ChIA-PET 22265404 MYEOV 29550 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 69451342 69451588 69451394 Y NA CCND1,ORAOV1 NA NA NA NA CCND1 2267 CAGE GSS hg19 FANTOM5 2.28682227151573 chr11 69453520 69454472 69453912 Y NA ORAOV1 NA NA NA NA CCND1 0 CAGE GSS hg19 FANTOM5 2.28682227151573 chr11 69632815 69633180 69632998 Y NA FGF4,FGF3 NA NA NA NA FGF3 1023 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 69639961 69640299 69640038 Y NA FGF3 FGF3 K562 ChIA-PET 22265404 FGF3 8169 CAGE GSS hg19 FANTOM5 23.6304968056625 chr11 69655407 69655781 69655522 Y FGF19,FGF3 FGF3 ANO1 IMR90 Hi-C 24141950 FGF3 23615 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 70107513 70107580 70107548 Y NA PPFIA1 NA NA NA NA PPFIA1 7226 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 71650610 71650763 71650692 Y NA RP11-849H4.2,RNF121 NUMA1,IL18BP IMR90 Hi-C 24141950 RNF121 12863 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 72854261 72854849 72854638 Y PDE2A,ARAP1,ATG16L2,RELT,RELT,FCHSD2 FCHSD2 NA NA NA NA FCHSD2 2955 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 73490470 73490918 73490608 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 5443 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 74814562 74814987 74814735 Y ARRB1 NA XRRA1,LOC100507050 IMR90 Hi-C 24141950 NEU3 117383 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 75919893 75920246 75919996 Y WNT11 WNT11 NA NA NA NA WNT11 113 CAGE GSS hg19 FANTOM5 3.81137045252621 chr11 75920696 75920900 75920748 Y NA WNT11 NA NA NA NA WNT11 916 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 77696711 77696891 77696801 Y NA INTS4 C11orf67,RSF1 IMR90 Hi-C 24141950 INTS4 6833 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 79093983 79094278 79094131 Y NA NA NA NA NA NA NARS2 810064 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 80935056 80935337 80935195 Y NA NA NA NA NA NA RP11-742N3.1 1463234 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 87043104 87043447 87043253 Y NA NA NA NA NA NA TMEM135 296218 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 88041244 88041443 88041379 Y NA CTSC NA NA NA NA CTSC 27512 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 91980380 91980674 91980445 Y FAT3 NA NA NA NA NA RP11-288E14.2 1285960 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 94882788 94883137 94883023 Y NA NA NA NA NA NA ENDOD1 61814 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 94987550 94987767 94987639 Y NA SESN3 NA NA NA NA SESN3 23845 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 95746570 95746792 95746680 Y FAM76B NA NA NA NA NA MTMR2 90091 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 95906618 95906816 95906767 Y NA NA NA NA NA NA MAML2 167528 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 95976157 95976737 95976478 Y FAM76B,MAML2,JRKL,CCDC82 NA NA NA NA NA MAML2 97607 CAGE GSS hg19 FANTOM5 1.52454818101048 chr11 95982466 95982894 95982863 Y NA NA NA NA NA NA MAML2 91450 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 96006843 96007267 96007082 Y FAM76B,MAML2,CCDC82 NA NA NA NA NA MAML2 67077 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 102191573 102191697 102191574 Y NA BIRC3,BIRC2 BIRC2 IMR90 Hi-C 24141950 BIRC3 5358 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 105090888 105091203 105091058 Y CASP4,CASP4,CASP5,CARD16,CARD17 NA NA NA NA NA RNU4-55P 602157 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 111692318 111692670 111692505 Y NA NA PPP2R1B IMR90 Hi-C 24141950 C11orf1 54989 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 113828537 113828676 113828607 Y NA NA NA NA NA NA USP28 84245 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 114288977 114289308 114289144 Y NA RBM7,C11orf71,REXO2 NA NA NA NA REXO2 18800 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 116802235 116802679 116802498 Y SIK3,PCSK7 NA NA NA NA NA APOC3 103813 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 117727133 117727461 117727363 Y NA FXYD6-FXYD2,FXYD6 NA NA NA NA FXYD6-FXYD2 17921 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 118187372 118187677 118187544 Y DDX6,UBE4A,MLL,MPZL3,CD3E,CD3G,CD3D UBE4A NA NA NA NA UBE4A 40623 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 118782911 118783378 118783221 Y SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84 MIR4492,BCL9L NA NA NA NA MIR4492 3494 CAGE GSS hg19 FANTOM5 3.81137045252621 chr11 118788249 118788453 118788294 Y MLL,PHLDB1,DDX6,VPS11,RPS25,CBL,C2CD2L,CCDC84 MIR4492,BCL9L NA NA NA NA BCL9L 5864 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 118790377 118790895 118790660 Y NA MIR4492,BCL9L NA NA NA NA BCL9L 3422 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 118793665 118793922 118793750 Y MLL,DDX6,VPS11,RPS25,CCDC84 MIR4492,BCL9L NA NA NA NA BCL9L 395 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 118794621 118795305 118795013 Y MLL,DDX6,VPS11,RPS25,CBL,CCDC84 MIR4492,BCL9L NA NA NA NA BCL9L 304 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 122312513 122312743 122312628 Y NA NA SC5DL,MIR100HG,MIR125B1 IMR90 Hi-C 24141950 UBASH3B 211640 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 123002865 123003144 123002952 Y NA NA NA NA NA NA HSPA8 70927 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 124458771 124459153 124459140 Y OR8G2,OR8G1,OR8D1,OR8D2,OR8B8,OR8B12,OR8A1 TBRG1 NA NA NA NA TBRG1 31579 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 124638889 124639135 124639012 Y NA NRGN NA NA NA NA NRGN 31147 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 125898187 125898226 125898207 Y CDON CDON,NAP1L1P1 NA NA NA NA CDON 33004 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 125937888 125938141 125938004 Y NA CDON,NAP1L1P1 NA NA NA NA NAP1L1P1 2454 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 126084365 126084425 126084397 Y NA FAM118B,RPUSD4 NA NA NA NA RPUSD4 4778 CAGE GSS hg19 FANTOM5 3.04909636202097 chr11 128445940 128446213 128446123 Y FLI1,FLI1 ETS1 NA NA NA NA ETS1 9240 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 129781322 129781453 129781412 Y APLP2 NFRKB NA NA NA NA NFRKB 17837 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 129871629 129871941 129871631 Y NA TCEB2P2 NA NA NA NA TCEB2P2 29174 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 133804654 133804943 133804849 Y NA NA NA NA NA NA JAM3 131877 CAGE GSS hg19 FANTOM5 2.28682227151573 chr11 133814977 133815479 133815368 Y NCAPD3,IGSF9B NA NA NA NA NA JAM3 121341 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 134124453 134124658 134124640 Y NCAPD3,THYN1,GLB1L3,GLB1L2 VPS26B,NCAPD3,THYN1,ACAD8 NA NA NA NA ACAD8 3064 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 134509789 134510106 134509920 Y NA NA NA NA NA NA B3GAT1 229977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr11 134722024 134722046 134722035 Y NA NA NA NA NA NA B3GAT1 442212 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 685193 685500 685436 Y NA NA NA NA NA NA RP11-218M22.1 52557 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 860254 860664 860544 Y RAD52,NINJ2,WNK1 WNK1 NA NA NA NA WNK1 495 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 1770869 1771337 1771069 Y LRTM2,ADIPOR2 ADIPOR2 NA NA NA NA ADIPOR2 24403 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 2144277 2144357 2144308 Y LRTM2 DCP1B CACNA1C,MIR3649,CACNA2D4,ADIPOR2,DCP1B,LOC100652846,WNT5B IMR90 Hi-C 24141950 DCP1B 32576 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 2401865 2402116 2401991 Y NA NA NA NA NA NA DCP1B 290164 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 6339954 6340271 6340062 Y VAMP1,TAPBPL,IFFO1 CD9,RP1-96H9.5 NA NA NA NA CD9 33073 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 7058106 7058233 7058157 Y ACSM4,VAMP1,ZNF384,ZNF384,CD4,CD4,LRRC23,PTPN6 ENO2,ATN1,C12orf57,RNU7-1,EMG1,U47924.27,PHB2 NA NA NA NA RNU7-1 7127 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 10517487 10517775 10517755 Y NA RP11-277P12.20,KLRC4-KLRK1 NA NA NA NA RP11-277P12.20 3119 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 10869298 10869573 10869459 Y NA STYK1 NA NA NA NA STYK1 44381 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 12957478 12957757 12957559 Y GPRC5A DDX47 NA NA NA NA DDX47 6493 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 13251023 13251431 13251083 Y EMP1 NA NA NA NA NA KIAA1467 55805 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 13253893 13254547 13254171 Y CDKN1B,EMP1 NA NA NA NA NA KIAA1467 58675 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 14926467 14926701 14926675 Y NA HIST4H4,H2AFJ,WBP11,C12orf60 NA NA NA NA H2AFJ 1197 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 16553699 16554214 16553898 Y NA NA NA NA NA NA MGST1 55623 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 22428776 22428931 22428867 Y NA NA NA NA NA NA CMAS 231668 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 22654594 22654831 22654713 Y NA NA NA NA NA NA ETNK1 121178 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 25539082 25539407 25539207 Y NA NA BCAT1,LYRM5,CASC1,KRAS,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 137212 CAGE GSS hg19 FANTOM5 4.57364454303145 chr12 26613437 26613637 26613504 Y FGFR1OP2 NA NA NA NA NA ITPR2 370494 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 31804886 31805136 31805063 Y NA METTL20 NA NA NA NA METTL20 6792 CAGE GSS hg19 FANTOM5 2.28682227151573 chr12 32405506 32405740 32405609 Y NA NA NA NA NA NA BICD1 147737 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 32881013 32881116 32881065 Y NA RP11-278C7.1,YARS2 NA NA NA NA RP11-278C7.1 2692 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 39766876 39767120 39766998 Y NA NA NA NA NA NA KIF21A 68072 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 42537125 42537342 42537234 Y NA GXYLT1 NA NA NA NA GXYLT1 444 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 44522730 44522871 44522801 Y NA NA NA NA NA NA TMEM117 294960 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 49628278 49628526 49628405 Y LMBR1L,TUBA1A TUBA1C,TUBA1A DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1A 47171 CAGE GSS hg19 FANTOM5 2.28682227151573 chr12 50221084 50221421 50221231 Y NCKAP5L NCKAP5L,BCDIN3D NA NA NA NA NCKAP5L 551 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 52241099 52241559 52241297 Y NA NA SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2 IMR90 Hi-C 24141950 ACVR1B 101892 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 52242460 52242886 52242778 Y SLC4A8,ANKRD33 NA SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2 IMR90 Hi-C 24141950 ACVR1B 100565 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 52540964 52541526 52541224 Y KRT80,KRT7,KRT6A,KRT5,NR4A1,C12orf44 NA KRT8,KRT84 MCF7 ChIA-PET 22265404 C12orf44 79934 CAGE GSS hg19 FANTOM5 3.04909636202097 chr12 52542210 52542726 52542513 Y KRT80,KRT7,KRT6B,KRT6A,KRT5,C12orf44 NA KRT8,KRT84 MCF7 ChIA-PET 22265404 C12orf44 81180 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 52557711 52558022 52557822 Y NA NA NA NA NA NA C12orf44 96681 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 52674043 52674518 52674247 Y NR4A1,C12orf44,KRT84,KRT6A,KRT5,KRT80 NA NA NA NA NA C12orf44 213013 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 52950129 52950435 52950283 Y KRT82 NA NA NA NA NA KRT18 390220 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 53267781 53268340 53268093 Y PFDN5 NA KRT18,KRT8,LOC283403,EIF4B,KRT80,LOC283404 MCF7 ChIA-PET 22265404 KRT18 72315 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 54411861 54412590 54411908 Y COPZ1,ATP5G2,HOXC10,HOXC9,HOXC8,HOXC4,HOXC6,HOXC5,HOXC4 HOXC10,HOXC6,HOXC9,HOXC-AS1,HOXC5,HOXC4 NA NA NA NA HOXC5 12047 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 54563652 54563918 54563802 Y NA NA NA NA NA NA CBX5 107968 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 56132069 56132385 56132308 Y OR6C4,OR10P1,SMARCC2,IKZF4 BLOC1S1,ITGA7,RP11-644F5.11,CD63 NA NA NA NA CD63 10578 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 57028610 57029302 57028864 Y NA BAZ2A,ATP5B NA NA NA NA BAZ2A 10 CAGE GSS hg19 FANTOM5 4.57364454303145 chr12 57635972 57636429 57636328 Y SLC26A10,R3HDM2,DTX3,B4GALNT1,ARHGEF25,NDUFA4L2 NXPH4,SHMT2 NA NA NA NA SHMT2 14862 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 58337769 58337952 58337777 Y NA XRCC6BP1 NA NA NA NA XRCC6BP1 4445 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 62712963 62713140 62713056 Y C12orf61,MON2,USP15 NA NA NA NA NA USP15 60844 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 63149457 63149757 63149616 Y NA NA NA NA NA NA PPM1H 177060 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 64544712 64545066 64544890 Y SRGAP1 NA NA NA NA NA C12orf66 69010 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 65012959 65013250 65013088 Y TBK1,RASSF3,GNS RASSF3 NA NA NA NA RASSF3 10666 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 66135126 66135637 66135353 Y HMGA2 NA NA NA NA NA HMGA2 80274 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 68705071 68705359 68705215 Y IL22 MDM1 NA NA NA NA MDM1 18802 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 68832634 68832995 68832815 Y NA NA RAP1B,SNORA70G IMR90 Hi-C 24141950 MDM1 108473 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 69006143 69006530 69006154 Y CPM,IFNG,RAP1B RAP1B,RP11-254B13.3 NA NA NA NA RAP1B 3524 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 69036661 69037118 69036873 Y NA RAP1B,RP11-254B13.3,NUP107 NA NA NA NA RP11-254B13.3 1888 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 73636899 73637241 73637070 Y NA NA NA NA NA NA ATXN7L3B 1292310 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 76053870 76054229 76054024 Y NA NA PHLDA1,NAP1L1,OSBPL8 IMR90 Hi-C 24141950 KRR1 150454 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 76060831 76060974 76060901 Y NA NA PHLDA1,OSBPL8 IMR90 Hi-C 24141950 KRR1 157415 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 76272060 76272354 76272328 Y PHLDA1 NA NA NA NA NA PHLDA1 153358 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 79341300 79341393 79341341 Y SYT1,SYT1 NA NA NA NA NA SYT1 85527 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 79462781 79463098 79462967 Y NA NA NA NA NA NA SYT1 207008 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 79526323 79526826 79526502 Y SYT1 NA NA NA NA NA SYT1 270550 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 79670829 79671264 79670913 Y NA NA NA NA NA NA PAWR 411613 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 83157091 83157416 83157138 Y NA NA NA NA NA NA TMTC2 78432 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 88828245 88828424 88828303 Y NA NA KITLG IMR90 Hi-C 24141950 KITLG 144204 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 88968059 88968366 88968242 Y NA KITLG NA NA NA NA KITLG 4262 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 92517978 92518398 92518142 Y BTG1 RP11-796E2.4,BTG1 NA NA NA NA RP11-796E2.4 18951 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 92991624 92992190 92991963 Y EEA1,BTG1 NA LOC256021 IMR90 Hi-C 24141950 EEA1 328917 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 93277124 93277496 93277306 Y NA EEA1 NA NA NA NA EEA1 43611 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 94678246 94678308 94678278 Y PLXNC1,TMCC3 NA NA NA NA NA CCDC41 173456 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 95680646 95681018 95680718 Y NA NA NA NA NA NA VEZT 71124 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 96634891 96635110 96635001 Y CDK17 ELK3 NA NA NA NA ELK3 48731 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 99103586 99103986 99103782 Y NA NA NA NA NA NA APAF1 66667 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 99768760 99769016 99768892 Y NA NA NA NA NA NA APAF1 731841 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 100596885 100596960 100596910 Y NA ACTR6,RP11-175P13.3 NA NA NA NA RP11-175P13.3 5324 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 101985490 101985520 101985505 Y NA NA NA NA NA NA CHPT1 103205 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 104330398 104330552 104330475 Y NA HSP90B1,C12orf73,TDG NA NA NA NA HSP90B1 8513 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 105030278 105030644 105030428 Y NA NA NA NA NA NA SLC41A2 319878 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 108103294 108103307 108103300 Y PRDM4 PWP1,PRDM4 NA NA NA NA PWP1 25785 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 108297283 108297694 108297638 Y NA NA NA NA NA NA PRDM4 144234 CAGE GSS hg19 FANTOM5 3.81137045252621 chr12 109120887 109121218 109121134 Y NA CORO1C NA NA NA NA CORO1C 2154 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 109232143 109232504 109232328 Y FICD,SELPLG,CORO1C,SSH1 SSH1 NA NA NA NA SSH1 16862 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 109249958 109250678 109250397 Y NA SSH1 NA NA NA NA SSH1 592 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 110867136 110867499 110867318 Y NA ANAPC7,ARPC3,GPN3 NA NA NA NA ARPC3 18728 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 111053049 111053390 111053220 Y NA PPTC7,TCTN1 NA NA NA NA TCTN1 3217 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 112018937 112019235 112019073 Y NA ATXN2 NA NA NA NA ATXN2 16245 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 112464061 112464211 112464136 Y NA TMEM116,ERP29 NA NA NA NA ERP29 14941 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 113502885 113503086 113502986 Y DTX1 NA NA NA NA NA RASAL1 68958 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 113660919 113661318 113661188 Y TPCN1 DDX54,TPCN1,IQCD NA NA NA NA IQCD 4020 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 114449273 114449426 114449313 Y NA RBM19 RBM19,TBX5 IMR90 Hi-C 24141950 RBM19 47097 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 120524802 120525368 120525019 Y CCDC64 RAB35 NA NA NA NA RAB35 27938 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 121310801 121311113 121311060 Y NA SPPL3,RPL12P33 NA NA NA NA SPPL3 29061 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 121839154 121839422 121839290 Y C12orf43,RHOF,KDM2B,RNF34 ANAPC5,RNF34 NA NA NA NA RNF34 3310 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 121888305 121888670 121888535 Y NA NA NA NA NA NA RNF34 52461 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 122020162 122020238 122020212 Y RNF34,SETD1B,ORAI1,KDM2B,KDM2B KDM2B,ORAI1 NA NA NA NA KDM2B 3242 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 122028609 122028883 122028798 Y RNF34,KDM2B,SETD1B,RHOF,ORAI1 KDM2B,ORAI1 KDM2B K562 ChIA-PET 22265404 KDM2B 11689 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 122908043 122908483 122908329 Y ZCCHC8,DENR,CLIP1 CLIP1 NA NA NA NA CLIP1 2864 CAGE GSS hg19 FANTOM5 5.33591863353669 chr12 123919438 123919802 123919750 Y C12orf65,RILPL2 RILPL2,SNRNP35 NA NA NA NA RILPL2 174 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125003619 125003834 125003727 Y NA NCOR2 NA NA NA NA NCOR2 46301 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125008756 125009019 125008888 Y NA NCOR2 NA NA NA NA NCOR2 41116 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125026162 125026505 125026332 Y NA NCOR2 NA NA NA NA NCOR2 23630 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125050856 125051375 125051213 Y UBC,NCOR2 NCOR2 NA NA NA NA NCOR2 721 CAGE GSS hg19 FANTOM5 2.28682227151573 chr12 125052829 125053041 125052928 Y NA NCOR2 NA NA NA NA NCOR2 2694 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125073637 125073873 125073849 Y UBC NCOR2 NCOR2 IMR90 Hi-C 24141950 NCOR2 23502 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125229298 125229517 125229417 Y NA NA NCOR2 IMR90 Hi-C 24141950 SCARB1 135697 CAGE GSS hg19 FANTOM5 1.52454818101048 chr12 125425237 125425455 125425374 Y NA UBC,RPL22P19,DHX37 UBC IMR90 Hi-C 24141950 RPL22P19 6796 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 125550830 125551017 125550923 Y NA AACS NA NA NA NA AACS 2905 CAGE GSS hg19 FANTOM5 0.762274090505242 chr12 131576959 131577127 131577033 Y NA NA NA NA NA NA RAN 222535 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 22135396 22135683 22135678 Y EFHA1 NA NA NA NA NA RPS7P10 65471 CAGE GSS hg19 FANTOM5 2.28682227151573 chr13 22242983 22243087 22242992 Y NA RPS7P10,FGF9 NA NA NA NA FGF9 435 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 22243438 22243610 22243458 Y FGF9 RPS7P10 NA NA NA NA FGF9 0 CAGE GSS hg19 FANTOM5 2.28682227151573 chr13 22249294 22249707 22249608 Y FGF9 RPS7P10,FGF9 NA NA NA NA FGF9 5772 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 22583629 22583981 22583861 Y EFHA1 NA NA NA NA NA FGF9 340107 CAGE GSS hg19 FANTOM5 1.52454818101048 chr13 22635626 22635842 22635673 Y NA NA NA NA NA NA FGF9 392104 CAGE GSS hg19 FANTOM5 2.28682227151573 chr13 24613267 24613398 24613318 Y SPATA13 NA SPATA13 IMR90 Hi-C 24141950 MIPEP 151709 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 24736701 24736916 24736809 Y NA NA NA NA NA NA MIPEP 275143 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 25856268 25856641 25856378 Y NA MTMR6,NUPL1 NA NA NA NA MTMR6 3506 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 25886402 25886789 25886419 Y NA MTMR6,NUPL1 NA NA NA NA NUPL1 12740 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 28010544 28010826 28010685 Y NA GTF3A,MTIF3 NA NA NA NA MTIF3 11913 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 30808184 30808483 30808334 Y NA NA NA NA NA NA PRDX2P1 59801 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 32433681 32434084 32433895 Y NA EEF1DP3 NA NA NA NA EEF1DP3 14703 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 32664585 32664831 32664706 Y NA NA NA NA NA NA BRCA2 222780 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 33003304 33003483 33003393 Y NA NA NA NA NA NA N4BP2L2 107487 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 34116442 34117241 34116673 Y NA NA NA NA NA NA RFC3 272945 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 35574872 35575244 35575038 Y NBEA NA NA NA NA NA NBEA 60448 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 41811647 41811915 41811781 Y NA KBTBD7,MTRF1 NA NA NA NA MTRF1 23827 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 44359761 44360131 44359976 Y ENOX1,ENOX1 NA NA NA NA NA LACC1 91289 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 46957218 46957500 46957457 Y NA NA NA NA NA NA KIAA0226L 52825 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 46962246 46962519 46962401 Y LCP1,C13orf18 KIAA0226L NA NA NA NA KIAA0226L 47806 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 47128564 47128952 47128887 Y LCP1,LRCH1 LRCH1 NA NA NA NA LRCH1 3261 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 49255829 49255937 49255863 Y NA NA CYSLTR2 IMR90 Hi-C 24141950 PSME2P2 87327 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 50897882 50898235 50898046 Y NA RPL34P26 DLEU2,DLEU1 IMR90 Hi-C 24141950 RPL34P26 35664 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 52303239 52303556 52303323 Y WDFY2 NA NA NA NA NA DHRS12 72737 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 53775107 53775689 53775457 Y NA NA NA NA NA NA SUGT1 550263 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 53814883 53815070 53814977 Y NA NA NA NA NA NA SUGT1 590039 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 59854407 59854488 59854447 Y NA NA NA NA NA NA DIAPH3 881633 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 72116042 72116082 72116062 Y DACH1 NA NA NA NA NA DACH1 323248 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 72366390 72366725 72366609 Y NA NA NA NA NA NA DACH1 72605 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 72438548 72439003 72438895 Y DACH1 DACH1 NA NA NA NA DACH1 327 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 72439142 72439615 72439332 Y DACH1 NA NA NA NA NA DACH1 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 74709487 74710034 74709735 Y KLF12 KLF12 NA NA NA NA KLF12 3093 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 80122895 80122985 80122937 Y NA NA NA NA NA NA NDFIP2 69608 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 94216006 94216018 94216012 Y NA NA NA NA NA NA SNORD22 196793 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 99128143 99128552 99128498 Y STK24 NA NA NA NA NA STK24 99642 CAGE GSS hg19 FANTOM5 1.52454818101048 chr13 104371816 104371919 104371873 Y NA NA NA NA NA NA ERCC5 876622 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 109921804 109922211 109922051 Y NA NA IRS2 IMR90 Hi-C 24141950 IRS2 514704 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 111176913 111177121 111177092 Y ING1,ING1,ANKRD10,RAB20 RAB20 NA NA NA NA RAB20 34959 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 111719893 111720066 111720029 Y NA ARHGEF7 ANKRD10,ARHGEF7,LINC00346 IMR90 Hi-C 24141950 ARHGEF7 44840 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 111819312 111819589 111819392 Y ING1,ING1,ING1,ANKRD10,ARHGEF7,ARHGEF7 NA NA NA NA NA ARHGEF7 54406 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 113597069 113597276 113597160 Y MCF2L MCF2L-AS1 MCF2L,MCF2L-AS1,F10,F7,CUL4A H1ESC,HELA,K562,IMR90,MCF7 5C,Hi-C,ChIA-PET 22955621,24141950,22265404 MCF2L-AS1 23862 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 114119812 114119949 114119881 Y NA DCUN1D2,TMCO3 NA NA NA NA DCUN1D2 23318 CAGE GSS hg19 FANTOM5 0.762274090505242 chr13 114906463 114906564 114906535 Y RASA3 RASA3 RASA3 MCF7 ChIA-PET 22265404 RASA3 10377 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 21150605 21151121 21150987 Y TEP1,TMEM55B,PNP,ZNF219,ARHGEF40 RNASE4,ANG NA NA NA NA ANG 269 CAGE GSS hg19 FANTOM5 2.28682227151573 chr14 21288613 21288985 21288797 Y NA NA NA NA NA NA ANG 138277 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 23293879 23294567 23294288 Y RBM23,C14orf119,SLC7A7,SLC7A7 MRPL52,MMP14,LRP10 REM2 MCF7 ChIA-PET 22265404 MRPL52 2521 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 24058094 24058646 24058322 Y NA THTPA,ZFHX2,AP1G2,DHRS2 NA NA NA NA AP1G2 22815 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 32953597 32954289 32954012 Y ARHGAP5,AKAP6,NPAS3 RP11-320M16.1 NA NA NA NA RP11-320M16.1 1591 CAGE GSS hg19 FANTOM5 3.81137045252621 chr14 33756619 33756719 33756669 Y NA NA NA NA NA NA EGLN3-AS1 750584 CAGE GSS hg19 FANTOM5 2.28682227151573 chr14 39559553 39559840 39559693 Y NA SEC23A,GEMIN2 NA NA NA NA SEC23A 17010 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 42075138 42075996 42075609 Y LRFN5 NA NA NA NA NA FBXO33 2175434 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 50334846 50335244 50334992 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 16925 CAGE GSS hg19 FANTOM5 3.04909636202097 chr14 50562564 50562863 50562716 Y RPL36AL,DNAAF2,NEMF,ARF6,ATP5S,C14orf182,METTL21D NA NA NA NA NA SOS2 133413 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 50799629 50799645 50799635 Y NA ATP5S,L2HGDH NA NA NA NA L2HGDH 22363 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 55921336 55921695 55921412 Y NA ATG14 NA NA NA NA ATG14 44760 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 56274024 56274269 56274148 Y NA RPL13AP3 NA NA NA NA RPL13AP3 43129 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 57459148 57459304 57459264 Y NA NA NA NA NA NA EXOC5 274422 CAGE GSS hg19 FANTOM5 1.52454818101048 chr14 58404418 58404760 58404612 Y NA NA NA NA NA NA UBA52P3 201237 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 61122184 61122613 61122502 Y NA SIX1 SLC38A6 IMR90 Hi-C 24141950 SIX1 364 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 61865216 61865457 61865337 Y PRKCH NA NA NA NA NA TMEM30B 118658 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 61934250 61934452 61934308 Y PRKCH,HIF1A NA NA NA NA NA TMEM30B 187692 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 65524481 65524844 65524562 Y PLEKHG3 MAX NA NA NA NA MAX 42569 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 67728313 67728625 67728469 Y NA MPP5 NA NA NA NA MPP5 22487 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 71797093 71797681 71797289 Y PCNX SIPA1L1 SIPA1L1,LOC145474 IMR90 Hi-C 24141950 SIPA1L1 11927 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 74224982 74225468 74225101 Y NA PNMA1 NA NA NA NA PNMA1 45854 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 75492523 75492557 75492545 Y NA EIF2B2,MLH3,ACYP1 NA NA NA NA MLH3 23678 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 77365860 77365973 77365943 Y NA RP11-488C13.1 C14orf166B,IRF2BPL,KIAA1737,ZDHHC22,TMED8,POMT2,GSTZ1 IMR90 Hi-C 24141950 RP11-488C13.1 14767 CAGE GSS hg19 FANTOM5 1.52454818101048 chr14 77431067 77431579 77431238 Y NA RP11-7F17.1 IRF2BPL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-7F17.1 1447 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 77499482 77500543 77500476 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 6448 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 81685513 81686063 81685724 Y GTF2A1,GTF2A1 SNORA79,DYNLL1P1 NA NA NA NA GTF2A1 0 CAGE GSS hg19 FANTOM5 1.52454818101048 chr14 91683304 91683542 91683359 Y NA NA NA NA NA NA RPS6KA5 158324 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 95731733 95732288 95732036 Y DICER1,CLMN NA NA NA NA NA CLMN 51955 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 96739430 96739734 96739582 Y NA NA NA NA NA NA ATG2B 88473 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 100659173 100659604 100659490 Y NA YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 YY1 43031 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 100751761 100751840 100751790 Y NA YY1,SLC25A29 NA NA NA NA SLC25A29 19044 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 100883887 100884104 100884057 Y BEGAIN WDR25 NA NA NA NA WDR25 43132 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 102288392 102288845 102288491 Y NA NA NA NA NA NA PPP2R5C 62257 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 102414226 102414964 102414565 Y NA DYNC1H1 NA NA NA NA DYNC1H1 13901 CAGE GSS hg19 FANTOM5 3.04909636202097 chr14 102438747 102439113 102438818 Y PPP2R5C,DYNC1H1 DYNC1H1 NA NA NA NA DYNC1H1 9882 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 103541337 103541574 103541446 Y NA CDC42BPB CDC42BPB,EIF5 MCF7 ChIA-PET 22265404 CDC42BPB 19538 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 105132512 105132664 105132612 Y TMEM179,INF2 INF2 NA NA NA NA INF2 21279 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 105438668 105438757 105438725 Y KIAA0284,JAG2,CDCA4,C14orf79,AHNAK2 C14orf79,CDCA4 NA NA NA NA C14orf79 11355 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 105500263 105500628 105500453 Y NA CDCA4 NA NA NA NA CDCA4 14778 CAGE GSS hg19 FANTOM5 0.762274090505242 chr14 105557924 105558306 105558075 Y NA NA BTBD6,BRF1,JAG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDCA4 72439 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 22897960 22898211 22898128 Y CYFIP1,CYFIP1 CYFIP1 NIPA2 IMR90 Hi-C 24141950 CYFIP1 7955 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 22927527 22927784 22927666 Y CYFIP1 CYFIP1 NA NA NA NA CYFIP1 37522 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 33472781 33472968 33472835 Y NA FMN1 NA NA NA NA FMN1 11929 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 37877991 37878069 37878030 Y TMCO5A NA NA NA NA NA MEIS2 486487 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 39741887 39742123 39742038 Y FSIP1 NA C15orf53,THBS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THBS1 129157 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 40373777 40374114 40374053 Y FSIP1,BAHD1,BMF,BMF,BMF SRP14,BMF NA NA NA NA BMF 24979 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 40463815 40464014 40463832 Y NA BUB1B NA NA NA NA BUB1B 12591 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 41953918 41954236 41954127 Y EHD4,MGA MGA MAPKBP1 IMR90 Hi-C 24141950 MGA 42496 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 46881345 46881677 46881639 Y NA NA NA NA NA NA SQRDL 959999 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 50475759 50476090 50475833 Y SLC27A2 SLC27A2 NA NA NA NA SLC27A2 3366 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 51169242 51169420 51169339 Y USP8,TRPM7,SPPL2A AP4E1 TRPM7,USP50,SPPL2A,AP4E1,ASB18 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 AP4E1 29449 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 51515990 51516083 51516067 Y SPPL2A,TNFAIP8L3,DMXL2 NA NA NA NA NA AP4E1 317121 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 52273738 52273979 52273778 Y NA MAPK6,LEO1 MAPK6,GNB5,MYO5C,BCL2L10 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LEO1 11735 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 52330351 52330361 52330356 Y NA NA NA NA NA NA CTD-2184D3.1 55131 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 57323913 57324233 57324065 Y NA NA NA NA NA NA TCF12 115092 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 58939079 58939427 58939418 Y NA NA NA NA NA NA ADAM10 100750 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 59023904 59024166 59024035 Y RNF111 ADAM10,FAM63B NA NA NA NA ADAM10 16011 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 59138361 59138756 59138559 Y NA RNF111 NA NA NA NA RNF111 16618 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 60883059 60884017 60883872 Y RORA NA NA NA NA NA RP11-219B17.1 113682 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 62207321 62207567 62207441 Y NA NA NA NA NA NA VPS13C 143105 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 64722485 64722825 64722650 Y NA KIAA0101,TRIP4,ZNF609 NA NA NA NA ZNF609 28116 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 65245420 65245827 65245459 Y ZNF609,OAZ2,PLEKHO2,PARP16 ANKDD1A,SPG21 NA NA NA NA SPG21 34821 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 65831867 65832220 65831871 Y NA DPP8,PTPLAD1 C15orf44 IMR90 Hi-C 24141950 PTPLAD1 11111 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 66707547 66707736 66707571 Y MAP2K1 TIPIN,MAP2K1 RPL4,SNAPC5 IMR90 Hi-C 24141950 MAP2K1 30392 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 68132387 68132778 68132514 Y PIAS1 NA NA NA NA NA PIAS1 211739 CAGE GSS hg19 FANTOM5 2.28682227151573 chr15 70006588 70006856 70006758 Y TLE3 NA C15orf50,TLE3 IMR90 Hi-C 24141950 RPLP1 263465 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 70391851 70392235 70392005 Y TLE3 TLE3 NA NA NA NA TLE3 3336 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 70556541 70556924 70556803 Y TLE3 NA LOC145837,TLE3 IMR90 Hi-C 24141950 TLE3 168026 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 71406673 71406868 71406715 Y NA NA NA NA NA NA THAP10 223549 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 72518614 72519346 72519221 Y ARIH1,PKM2 NA NA NA NA NA MYO9A 109696 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 73538661 73539057 73538860 Y NEO1 NA NA NA NA NA NEO1 196610 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 74909072 74909376 74909224 Y NA CLK3 NA NA NA NA CLK3 20231 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 75075558 75076065 75075775 Y ARID3B,CLK3,CLK3,SCAMP2,C15orf39,CSK CSK NA NA NA NA CSK 3160 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 75397173 75397774 75397428 Y SIN3A,SIN3A,MAN2C1,CLK3,CSK,C15orf39 NA C15orf39 MCF7 ChIA-PET 22265404 PPCDC 83277 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 75959061 75959441 75959310 Y SNX33 SNUPN,SNX33,IMP3 NA NA NA NA IMP3 20014 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 76639629 76639850 76639740 Y NA ETFA,ISL2 NA NA NA NA ISL2 12564 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 77635534 77635848 77635691 Y NA NA NA NA NA NA PEAK1 74638 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 79269322 79269965 79269452 Y CTSH CTSH NA NA NA NA CTSH 29406 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 79767814 79767956 79767881 Y BCL2A1 NA NA NA NA NA TMED3 166410 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 80697752 80697924 80697805 Y ARNT2 ARNT2 NA NA NA NA ARNT2 3060 CAGE GSS hg19 FANTOM5 11.4341113575786 chr15 81277111 81277444 81277389 Y STARD5,MESDC1 MESDC2,MESDC1 NA NA NA NA MESDC2 2775 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 82339167 82339811 82339478 Y MEX3B MEX3B NA NA NA NA MEX3B 2685 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 83239509 83239741 83239625 Y AP3B2,CPEB1 RPS17L NA NA NA NA RPS17L 32194 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 83537231 83537313 83537271 Y NA NA NA NA NA NA WHAMM 60851 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 83680959 83681167 83681099 Y NA HOMER2,FAM103A1,C15orf40 NA NA NA NA C15orf40 2566 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 83683180 83683566 83683373 Y NA HOMER2,FAM103A1,C15orf40 NA NA NA NA C15orf40 4787 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 85131508 85131753 85131631 Y PDE8A ZSCAN2 NA NA NA NA ZSCAN2 10464 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 85566958 85567254 85567106 Y NA PDE8A NA NA NA NA PDE8A 45287 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 85645018 85645768 85645040 Y NA NA NA NA NA NA PDE8A 123347 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 85956762 85957097 85956878 Y AKAP13,PDE8A AKAP13 NA NA NA NA AKAP13 34960 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 86131454 86131632 86131493 Y AKAP13 NA NA NA NA NA KLHL25 204629 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 89664635 89664981 89664666 Y NA ABHD2,HMGB1P8 NA NA NA NA HMGB1P8 12745 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 89672226 89672631 89672291 Y ABHD2 ABHD2,HMGB1P8 NA NA NA NA HMGB1P8 5095 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 90547918 90548344 90548145 Y NA NA NA NA NA NA C15orf38 93730 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 90577561 90577868 90577654 Y AP3S2,ZNF710,SEMA4B,IQGAP1 NA NA NA NA NA IDH2 65868 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 90605290 90605500 90605324 Y NA IDH2 NA NA NA NA IDH2 38236 CAGE GSS hg19 FANTOM5 1.52454818101048 chr15 91208661 91208996 91208948 Y NA BLM NA NA NA NA BLM 49562 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 91989048 91989141 91989075 Y NA NA NA NA NA NA SLCO3A1 405784 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 92486330 92486707 92486433 Y SLCO3A1 NA NA NA NA NA SLCO3A1 91405 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 93363497 93364154 93363735 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 FAM174B ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 FAM174B 12383 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 93864881 93865242 93865107 Y NA NA NA NA NA NA CHD2 440355 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 96884042 96884481 96884402 Y NA NR2F2,NR2F2-AS1 NA NA NA NA NR2F2-AS1 15452 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 99193577 99194531 99194069 Y IGF1R IGF1R NA NA NA NA IGF1R 3377 CAGE GSS hg19 FANTOM5 0.762274090505242 chr15 101986946 101987282 101987113 Y CHSY1,TM2D3 NA NA NA NA NA PCSK6 76123 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 154913 155267 155125 Y NHLRC4,HBQ1,HBM RHBDF1,MPG,NPRL3 NA NA NA NA MPG 29907 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 389816 389946 389892 Y NA AXIN1,MRPL28,TMEM8A NA NA NA NA AXIN1 10727 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 651803 652154 651979 Y NA PIGQ,RAB40C,C16orf13,FAM195A,AL022341.3,WDR90 NA NA NA NA RAB40C 14446 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 1979729 1980160 1979842 Y TSC2,MLST8,DNASE1L2,C16orf79,ABCA3,CCDC154,NME3,NUBP2,TBL3,RNF151 NDUFB10,SNORA64,RPS2,SNHG9,TBL3 NUBP2,FAHD1,IGFALS,C16orf73,HS3ST6,MAPK8IP3,SPSB3,EME2,NME3,MRPS34,HAGH,LINC00254 IMR90 Hi-C 24141950 NDUFB10 27349 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 2657653 2657823 2657765 Y NA NA NA NA NA NA ERVK13-1 63622 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 2743231 2743530 2743363 Y NA ERVK13-1,KCTD5 NA NA NA NA KCTD5 12755 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 2917931 2918273 2918246 Y NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 12914 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 2924940 2925188 2925019 Y NA FLYWCH2,FLYWCH1 PRSS22,FLYWCH1,PRSS41,PRSS33,TCEB2,ZG16B,PRSS30P,PRSS21,FLYWCH2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FLYWCH2 5999 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 3156518 3156937 3156694 Y PAQR4,CLUAP1,ZNF205 ZNF205,ZNF213 NA NA NA NA ZNF205 3624 CAGE GSS hg19 FANTOM5 2.28682227151573 chr16 3200393 3200919 3200597 Y NA ZNF205,ZNF213 NA NA NA NA ZNF213 22615 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 3202363 3202472 3202417 Y NA ZNF205,ZNF213 NA NA NA NA ZNF213 24585 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 3207486 3207903 3207712 Y SRRM2,ZNF75A,ZNF597,ZNF200,ZNF200,ZNF200,NLRC3,MEFV ZNF205,ZNF213 NA NA NA NA ZNF213 29708 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 3414643 3415237 3414919 Y NA ZNF174 NA NA NA NA ZNF174 33998 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 4233647 4234082 4234013 Y NA NA NA NA NA NA ADCY9 69461 CAGE GSS hg19 FANTOM5 6.09819272404193 chr16 4321625 4322178 4321908 Y ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4 TFAP4 NA NA NA NA TFAP4 549 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 4666118 4666710 4666381 Y NA MGRN1 NA NA NA NA MGRN1 1624 CAGE GSS hg19 FANTOM5 3.81137045252621 chr16 6807749 6808080 6807872 Y RBFOX1 NA NA NA NA NA FAM86A 1661940 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 8852303 8852368 8852337 Y NA PMM2,TMEM186 PMM2,TMEM186 IMR90 Hi-C 24141950 PMM2 28312 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 9141634 9142026 9141729 Y NA C16orf72 USP7,C16orf72 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C16orf72 41479 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 10549193 10549271 10549232 Y EMP2 NA NA NA NA NA EMP2 123284 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 11326911 11327269 11327154 Y SNN,LITAF,LITAF,NUBP1,CIITA,SOCS1 RMI2,SOCS1 CLEC16A IMR90 Hi-C 24141950 RMI2 14207 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 11654480 11655021 11654741 Y ZC3H7A,TXNDC11,LITAF,LITAF NA NA NA NA NA LITAF 73216 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 12700714 12700789 12700756 Y NA NA NA NA NA NA CPPED1 195085 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 12713340 12713716 12713664 Y NA NA SNX29 IMR90 Hi-C 24141950 CPPED1 182158 CAGE GSS hg19 FANTOM5 2.28682227151573 chr16 13069429 13069750 13069475 Y SHISA9 NA NA NA NA NA SHISA9 75952 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 15766632 15767024 15766843 Y KIAA0430,NDE1,NDE1 KIAA0430,NDE1 NA NA NA NA NDE1 31508 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 15769690 15769796 15769712 Y NA KIAA0430,NDE1 NA NA NA NA NDE1 34566 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 18811720 18812078 18811899 Y SMG1,COQ7,COQ7 RPS15A,ARL6IP1 NA NA NA NA ARL6IP1 720 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 19222406 19222654 19222461 Y NA SYT17 NA NA NA NA SYT17 45113 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 22202596 22202946 22202679 Y POLR3E,CDR2 EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 12657 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 22349127 22349159 22349143 Y POLR3E POLR3E NA NA NA NA POLR3E 42397 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 22406960 22407340 22407096 Y NA CDR2 POLR3E,CDR2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDR2 39146 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 24077587 24077959 24077773 Y PRKCB NA NA NA NA NA PLK1 390610 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 27149778 27150235 27150058 Y NA NA HS3ST4,ZKSCAN2,AQP8 IMR90 Hi-C 24141950 NSMCE1 127880 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 28839972 28840187 28840086 Y CCDC101,LAT,LAT,SH2B1,SH2B1,SH2B1,NFATC2IP ATXN2L,TUFM,SH2B1 NA NA NA NA ATXN2L 7616 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 30645556 30645885 30645776 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF689 12223 CAGE GSS hg19 FANTOM5 3.81137045252621 chr16 30690514 30690886 30690711 Y NA PRR14,FBRS,SRCAP NA NA NA NA SRCAP 16644 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 30994228 30994553 30994360 Y VKORC1,HSD3B7 ORAI3,SETD1A,STX4 NA NA NA NA SETD1A 27613 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 33509690 33509798 33509723 Y NA NA NA NA NA NA ZNF267 1626611 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 50372721 50373321 50373026 Y PAPD5,ADCY7,CYLD,CYLD BRD7 NA NA NA NA BRD7 27524 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 50376082 50376389 50376371 Y NA BRD7 NA NA NA NA BRD7 24456 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 50501772 50501939 50501899 Y NA NA NKD1 IMR90 Hi-C 24141950 NKD1 78302 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 51187930 51188326 51188194 Y NA NA NA NA NA NA CYLD 413969 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 52489873 52490156 52490047 Y NA NA NA NA NA NA TOX3 89558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 53124874 53125001 53124924 Y NA CHD9 NA NA NA NA CHD9 37929 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 53865846 53866045 53865946 Y NA NA NA NA NA NA FTO 129971 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 57488914 57489209 57489062 Y NA COQ9,CIAPIN1,POLR2C,DOK4 NA NA NA NA POLR2C 5090 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 57541705 57541726 57541715 Y NA POLR2C,DOK4,CCDC102A POLR2C,DOK4,COQ9,CIAPIN1 IMR90 Hi-C 24141950 DOK4 22466 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 57564039 57564411 57564096 Y ZNF319,GPR114 DOK4,CCDC102A NA NA NA NA CCDC102A 4100 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 57654867 57655271 57654917 Y NA NA NA NA NA NA CCDC102A 86356 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 57717053 57717380 57717096 Y FAM192A,ZNF319,GPR97 NA NA NA NA NA KATNB1 50262 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 66659405 66659873 66659770 Y NA CMTM3 NA NA NA NA CMTM3 23628 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 66906996 66907469 66907329 Y SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2 NAE1,PDP2 NA NA NA NA NAE1 1837 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 68271348 68271876 68271591 Y TSNAXIP1,SLC12A4,ESRP2 ESRP2,PLA2G15,SLC7A6 NA NA NA NA ESRP2 1343 CAGE GSS hg19 FANTOM5 3.04909636202097 chr16 68320405 68320913 68320608 Y ZFP90,SMPD3 PLA2G15,SLC7A6,SLC7A6OS,PRMT7 NA NA NA NA SLC7A6OS 21936 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 69506405 69506529 69506498 Y NA CYB5B NA NA NA NA CYB5B 49977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 69790577 69791500 69790768 Y PDF,NIP7,NOB1 NQO1,NOB1,WWP2 NA NA NA NA WWP2 2709 CAGE GSS hg19 FANTOM5 6.09819272404193 chr16 70451023 70451476 70451223 Y NA ST3GAL2,FUK NA NA NA NA ST3GAL2 19664 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 73084736 73084892 73084798 Y NA ZFHX3 NA NA NA NA ZFHX3 6705 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 73104505 73104770 73104567 Y ZFHX3,ZFHX3 ZFHX3 ZFHX3,HTA IMR90 Hi-C 24141950 ZFHX3 12908 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 74701397 74701877 74701440 Y RFWD3 RFWD3,MLKL NA NA NA NA RFWD3 2618 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 78832287 78832508 78832373 Y NA NA NA NA NA NA WWOX 700977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 80965900 80966145 80965922 Y NA NA CMC2 IMR90 Hi-C 24141950 CENPN 71958 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 81649296 81649780 81649593 Y NA NA NA NA NA NA PLCG2 120922 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 82084098 82084340 82084124 Y NA NA NA NA NA NA MPHOSPH6 117491 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 83960761 83960901 83960832 Y NA MLYCD,OSGIN1,NECAB2 NA NA NA NA OSGIN1 18986 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 85037797 85037883 85037799 Y NA ZDHHC7 NA NA NA NA ZDHHC7 5258 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 85202555 85203049 85202710 Y NA NA NA NA NA NA ZDHHC7 159414 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 85586938 85587370 85587020 Y NA NA LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GINS2 134309 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 85603305 85603679 85603564 Y KIAA0182 NA LINC00311,FAM92B IMR90 Hi-C 24141950 GINS2 118000 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 87759379 87759621 87759456 Y C16orf95,FBXO31,ZCCHC14,JPH3 KLHDC4 NA NA NA NA KLHDC4 37977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 87840547 87840941 87840913 Y SLC7A5 KLHDC4 SLC7A5 MCF7 ChIA-PET 22265404 KLHDC4 42949 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 87870717 87871153 87871035 Y NA SLC7A5 NA NA NA NA SLC7A5 29941 CAGE GSS hg19 FANTOM5 1.52454818101048 chr16 87878915 87879213 87879066 Y NA SLC7A5 NA NA NA NA SLC7A5 21881 CAGE GSS hg19 FANTOM5 7.62274090505242 chr16 87904170 87904524 87904347 Y FBXO31 SLC7A5 NA NA NA NA SLC7A5 3076 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 88520905 88521327 88521137 Y ZC3H18,SNAI3,RNF166,RNF166,RNF166,ZFPM1 ZFPM1 NA NA NA NA ZFPM1 3180 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 88837093 88837695 88837443 Y NA PIEZO1,CDT1,APRT NA NA NA NA PIEZO1 11924 CAGE GSS hg19 FANTOM5 2.28682227151573 chr16 89601012 89601134 89601078 Y ZNF276,ZNF276,SPATA2L ANKRD11,SPG7,RPL13,SNORD68,CPNE7 NA NA NA NA RPL13 23931 CAGE GSS hg19 FANTOM5 0.762274090505242 chr16 90087429 90087721 90087595 Y TUBB3,DBNDD1,PRDM7 GAS8,DBNDD1 NA NA NA NA DBNDD1 2893 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 1014015 1014933 1014151 Y PITPNA,CRK,ABR NA NA NA NA NA ABR 115382 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 1391218 1391783 1391434 Y NA CRK,MYO1C,INPP5K NA NA NA NA MYO1C 2323 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 1979194 1979509 1979218 Y NA DPH1,OVCA2,HIC1 NA NA NA NA HIC1 23746 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 2302778 2303366 2303033 Y SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT MNT NA NA NA NA MNT 366 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 2612424 2612524 2612493 Y NA NA NA NA NA NA PAFAH1B1 117920 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 4934963 4935218 4935186 Y NA CAMTA2,KIF1C NA NA NA NA KIF1C 35720 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 5000892 5001205 5000989 Y NA AC012146.7,ZNF232 NA NA NA NA AC012146.7 11558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 6924662 6924902 6924783 Y BCL6B AC027763.2,RNASEK,C17orf49,SLC16A13 NA NA NA NA C17orf49 8848 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 7389589 7389989 7389739 Y C17orf49,GPS2,ACAP1,WRAP53,KDM6B,CHD3,AMAC1L3,ZBTB4,POLR2A CHRNB1,ZBTB4,POLR2A NA NA NA NA POLR2A 3904 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 7737438 7738736 7737971 Y ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,KDM6B KDM6B,CYB5D1,CHD3,LSMD1 NA NA NA NA KDM6B 2486 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 7738822 7740614 7739046 Y ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B KDM6B,CYB5D1,CHD3,LSMD1 NA NA NA NA KDM6B 608 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 7745337 7745870 7745591 Y NA KDM6B,CYB5D1,CHD3,LSMD1 NA NA NA NA KDM6B 4115 CAGE GSS hg19 FANTOM5 3.81137045252621 chr17 7746991 7747556 7747325 Y POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B KDM6B,CYB5D1,CHD3,LSMD1 NA NA NA NA KDM6B 5769 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 8031830 8031985 8031892 Y CNTROB,ODF4 HES7,PER1,VAMP2,SNORD118,TMEM107 ALOXE3,HES7 IMR90 Hi-C 24141950 HES7 6420 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 8103328 8103700 8103595 Y NA PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,LINC00324,PFAS,CTC1 NA NA NA NA AURKB 8218 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 8850448 8850862 8850791 Y PIK3R5,PIK3R5 NA NA NA NA NA NDEL1 535999 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 16438910 16439232 16439111 Y NA NA NA NA NA NA ZNF624 115938 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 17597479 17598220 17598134 Y ALKBH5,FLCN,COPS3 RAI1 NA NA NA NA RAI1 14692 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 17655489 17655938 17655636 Y DRG2,ALKBH5,COPS3,MED9 NA NA NA NA NA RAI1 72702 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 17743258 17743857 17743527 Y SMCR8 SREBF1 NA NA NA NA SREBF1 4933 CAGE GSS hg19 FANTOM5 3.04909636202097 chr17 20690369 20690534 20690439 Y NA OLA1P2,SCDP1 NA NA NA NA SCDP1 4411 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 21189600 21190105 21189864 Y MAP2K3,MAP2K3 C17orf103,MAP2K3 NA NA NA NA MAP2K3 3616 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 25659975 25660361 25659997 Y NA WSB1 NA NA NA NA WSB1 40873 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 25680632 25681097 25680982 Y NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 61530 CAGE GSS hg19 FANTOM5 7.62274090505242 chr17 25981784 25982180 25981982 Y NA NA NA NA NA NA KSR1 200114 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 26277984 26278379 26278193 Y SEBOX NA NA NA NA NA NLK 88384 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 27220048 27220212 27220121 Y NA ERAL1,FLOT2,DHRS13 NA NA NA NA FLOT2 2485 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 27475765 27476166 27476073 Y NEK8,PHF12 MYO18A NA NA NA NA MYO18A 29264 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 27506307 27506816 27506504 Y TLCD1,TLCD1,TRAF4,GIT1,MYO18A MYO18A NA NA NA NA MYO18A 877 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 27568035 27568215 27568131 Y NA NA NA NA NA NA NUFIP2 50921 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 27619094 27619880 27619581 Y TAOK1 NA NA NA NA NA NUFIP2 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 27918115 27918172 27918144 Y GIT1,ANKRD13B TP53I13,ABHD15,ANKRD13B,GIT1,CORO6 NA NA NA NA GIT1 900 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 29212303 29212381 29212342 Y OMG,NF1,C17orf42 ADAP2,TEFM NA NA NA NA ADAP2 18981 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 29876692 29877391 29877039 Y NA NA NA NA NA NA RAB11FIP4 160050 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 30335785 30336145 30335965 Y NA NA NA NA NA NA SUZ12 73748 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 33787408 33787803 33787736 Y ZNF830,SLFN5,CCL5,SLFN12L NA NA NA NA NA AP2B1 115262 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 34875469 34875747 34875679 Y NA ZNHIT3,PIGW,MYO19,GGNBP2 NA NA NA NA PIGW 13100 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 35425108 35425365 35425237 Y NA NA NA NA NA NA AATF 120933 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 35514299 35514470 35514425 Y NA NA NA NA NA NA AATF 210124 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 36571646 36572076 36571709 Y C17orf96 ARHGAP23 NA NA NA NA ARHGAP23 10586 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 36859613 36860666 36860145 Y NA C17orf96,CISD3,PCGF2,PSMB3 NA NA NA NA MLLT6 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 37910411 37911394 37910787 Y FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3 MIEN1,GRB7 NA NA NA NA GRB7 18231 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 38254249 38254664 38254597 Y GRB7,WIPF2,RARA,RARA,NR1D1 THRA,MED24,NR1D1,MSL1,CASC3 NA NA NA NA NR1D1 314 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 38648531 38648872 38648707 Y KRT10,MSL1,TNS4 TNS4 NA NA NA NA TNS4 6977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 38703564 38704159 38703879 Y SMARCE1,MED24,CASC3,TOP2A,CCR7 TNS4 NA NA NA NA TNS4 47715 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 38713026 38713386 38713205 Y KRTAP2-1 NA NA NA NA NA TNS4 57177 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 38763906 38764295 38764082 Y CASC3,WIPF2,CCR7 SMARCE1 NA NA NA NA SMARCE1 38465 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 39091937 39092186 39091988 Y KRTAP2-1 KRT23,KRT40 NA NA NA NA KRT23 51 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 39653134 39653351 39653234 Y NA KRT19 NA NA NA NA KRT19 29209 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 40628029 40628344 40628111 Y NA ATP6V0A1,AC067852.1 NA NA NA NA ATP6V0A1 19167 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 42276572 42276897 42276785 Y TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3 TMUB2,ATXN7L3,UBTF NA NA NA NA ATXN7L3 1091 CAGE GSS hg19 FANTOM5 3.81137045252621 chr17 42634020 42634172 42634095 Y TMUB2,TMUB2,GRN,FZD2 FZD2 NA NA NA NA FZD2 1095 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 42797981 42798248 42798116 Y CCDC43 CCDC43,DBF4B NA NA NA NA DBF4B 14005 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 44198056 44198387 44198212 Y STH,KIAA1267,KIAA1267 NA NA NA NA NA MAPT 228308 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 44240473 44240874 44240856 Y NA NA NA NA NA NA MAPT 270725 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 44344171 44344471 44344293 Y NA NA KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MAPT 374423 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 44848199 44848613 44848371 Y NA NA NA NA NA NA RPS7P11 50666 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 44848812 44849347 44849259 Y NA NA NA NA NA NA RPS7P11 51279 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 45021726 45021957 45021796 Y NA GOSR2 NA NA NA NA GOSR2 23243 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 45771013 45771467 45771041 Y NPEPPS,OSBPL7,CDK5RAP3,TBX21,TBKBP1 KPNB1 NA NA NA NA KPNB1 46171 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 46102426 46102830 46102617 Y NA NFE2L1 NA NA NA NA NFE2L1 20861 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 47092021 47092148 47092036 Y NA IGF2BP1 NA NA NA NA IGF2BP1 19247 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 48066634 48067004 48066930 Y NA DLX4 NA NA NA NA DLX4 22300 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 48255388 48256117 48255676 Y NA PPP1R9B,HILS1 NA NA NA NA HILS1 422 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 48942663 48943085 48943016 Y NA TOB1 NA NA NA NA TOB1 254 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 53006732 53007120 53006925 Y NA TOM1L1,STXBP4,COX11 NA NA NA NA TOM1L1 31984 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 53034991 53035170 53035032 Y NA STXBP4,COX11 NA NA NA NA STXBP4 8918 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 55540558 55540950 55540705 Y NA NA NA NA NA NA MSI2 209346 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 55912487 55912699 55912681 Y NA MRPS23 NA NA NA NA MRPS23 12718 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 55976255 55976501 55976378 Y OR4D2 NA NA NA NA NA MRPS23 50838 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 56012688 56013140 56012704 Y NA CUEDC1 VEZF1,SRSF1,CUEDC1 IMR90 Hi-C 24141950 CUEDC1 17544 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 56013342 56013699 56013370 Y NA CUEDC1,VEZF1 VEZF1,CUEDC1,SRSF1 IMR90 Hi-C 24141950 CUEDC1 16985 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 56736656 56737064 56736885 Y MTMR4,SEPT4,SEPT4,PPM1E RNU1-85P,RAD51C SEPT4,C17orf47 K562,MCF7 ChIA-PET 22265404 RNU1-85P 17987 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 57200500 57200626 57200599 Y GDPD1 AC099850.1,TRIM37,SKA2,PRR11 NA NA NA NA TRIM37 18218 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 57231530 57231848 57231723 Y NA AC099850.1,TRIM37,SKA2,PRR11 NA NA NA NA PRR11 670 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 57841314 57841767 57841379 Y NA NA NA NA NA NA PTRH2 58327 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 57922999 57923843 57923122 Y PTRH2,TUBD1,RPS6KB1,HEATR6 MIR21,TUBD1,RPS6KB1 NA NA NA NA MIR21 6372 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 59488217 59488528 59488332 Y NA C17orf82 NA NA NA NA C17orf82 1105 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 59784149 59784411 59784258 Y BRIP1 NA NA NA NA NA NACA2 117586 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 59956289 59956463 59956377 Y NA BRIP1,INTS2 BRIP1 IMR90 Hi-C 24141950 BRIP1 17407 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 60085676 60086036 60086030 Y NACA2,MED13 NA NA NA NA NA MED13 54607 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 60141349 60141594 60141514 Y NACA2,MED13 MED13 INTS2 MCF7 ChIA-PET 22265404 MED13 706 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 60247601 60248070 60247921 Y MED13 NA NA NA NA NA MED13 106958 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 60721967 60722242 60722046 Y NA MRC2 NA NA NA NA MRC2 19205 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 60729712 60730300 60729931 Y NA MRC2 NA NA NA NA MRC2 26950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 61153436 61153733 61153585 Y NA NA NA NA NA NA CYB561 368006 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 61243701 61244044 61243838 Y NA NA NA NA NA NA CYB561 277695 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 63119249 63119621 63119552 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 68292 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 63510856 63511230 63511043 Y NA AXIN2 NA NA NA NA AXIN2 44535 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 63759124 63759374 63759249 Y NA NA NA NA NA NA AXIN2 203359 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 64301184 64301397 64301241 Y NA PRKCA NA NA NA NA PRKCA 4430 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 64432039 64432445 64432242 Y NA NA NA NA NA NA PRKCA 135285 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 64455929 64456369 64456061 Y NA NA NA NA NA NA PRKCA 159175 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 65583636 65583728 65583682 Y BPTF NA NA NA NA NA NOL11 128221 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 66209510 66209898 66209720 Y NA AMZ2,ARSG NA NA NA NA AMZ2 31817 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 66322964 66323100 66323038 Y SLC16A6 SLC16A6 NA NA NA NA SLC16A6 37556 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 66434083 66434422 66434387 Y NA WIPI1 NA NA NA NA WIPI1 17232 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70374697 70374707 70374702 Y NA NA SOX9,LOC100499467 IMR90 Hi-C 24141950 RPL32P33 246663 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 70417215 70417683 70417549 Y SOX9 NA NA NA NA NA RPL32P33 203687 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70423161 70423493 70423326 Y NA NA NA NA NA NA RPL32P33 197877 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70426216 70426228 70426222 Y NA NA NA NA NA NA RPL32P33 195142 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70442621 70442708 70442666 Y SOX9 NA NA NA NA NA RPL32P33 178662 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70585200 70585480 70585419 Y NA RPL32P33,LINC00511 NA NA NA NA RPL32P33 35890 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70585924 70586379 70586141 Y NA RPL32P33,LINC00511 NA NA NA NA RPL32P33 34991 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 70628447 70628581 70628499 Y NA RPL32P33,LINC00511 NA NA NA NA LINC00511 6030 CAGE GSS hg19 FANTOM5 3.04909636202097 chr17 71301216 71301553 71301269 Y NA CDC42EP4 NA NA NA NA CDC42EP4 4761 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 71639437 71639585 71639501 Y SDK2 SDK2 NA NA NA NA SDK2 1209 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 72978355 72978661 72978434 Y KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L CDR2L,ICT1,KCTD2 CDR2L,ICT1,C17orf28,HN1 MCF7,K562 ChIA-PET 22265404 CDR2L 3066 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 73545364 73545732 73545559 Y NA CASKIN2,TSEN54,LLGL2 NA NA NA NA LLGL2 26203 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 73850621 73850811 73850693 Y GRB2,GRB2,SAP30BP,H3F3B,FAM100B,EVPL,ACOX1,UNC13D,WBP2,TRIM47 WBP2,TRIM47,TRIM65 NA NA NA NA WBP2 33 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 74134600 74134832 74134764 Y LOC100130933,RECQL5,RECQL5,PRPSAP1,ZACN,FOXJ1 EXOC7 NA NA NA NA EXOC7 18943 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 74269060 74269291 74269140 Y RHBDF2,JMJD6,H3F3B,UNK,SPHK1,RNF157,FAM100B ATF4P3,RNF157 NA NA NA NA RNF157 34606 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 74415585 74415933 74415760 Y MFSD11,RNF157 SPHK1,PRPSAP1,UBE2O NA NA NA NA UBE2O 31355 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 75361925 75362048 75361987 Y NA NA NA NA NA NA SEPT9 87274 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 75385660 75386043 75385777 Y SEPT9 NA NA NA NA NA SEPT9 111009 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 75387909 75388384 75388205 Y SEPT9,SEPT9 NA NA NA NA NA SEPT9 113258 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 75388510 75388802 75388677 Y NA NA NA NA NA NA SEPT9 113859 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 75405377 75405733 75405639 Y NA NA NA NA NA NA SEPT9 130726 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 75421302 75421687 75421325 Y SEPT9,SEPT9,SEPT9 NA NA NA NA NA SEPT9 146651 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 75422359 75422648 75422577 Y SEPT9,SEPT9,SEPT9,SEPT9 NA NA NA NA NA SEPT9 147708 CAGE GSS hg19 FANTOM5 6.86046681454718 chr17 75954393 75954796 75954614 Y NA RNU1-80P,TNRC6C TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNU1-80P 40213 CAGE GSS hg19 FANTOM5 18.2945781721258 chr17 76254688 76254992 76254867 Y TNRC6C,TMC6,TMC8,TMC6,C17orf99,SOCS3,PGS1 BIRC5 NA NA NA NA BIRC5 46421 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 76310071 76310633 76310436 Y CYTH1,SOCS3,PGS1 SOCS3 PGS1,DNAH17,SOCS3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS3 43525 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 76337607 76338208 76338068 Y USP36,CYTH1,SOCS3,PGS1 SOCS3,PGS1 NA NA NA NA SOCS3 15950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 77783959 77784243 77784073 Y CBX2,CBX8 CBX2,CBX8,CBX4 NA NA NA NA CBX8 10477 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 77787297 77787609 77787349 Y NA CBX2,CBX8,CBX4 NA NA NA NA CBX8 13815 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 77967532 77967765 77967641 Y CBX8,CBX4,RNF213,GAA,EIF4A3 TBC1D16,CCDC40 NA NA NA NA TBC1D16 39882 CAGE GSS hg19 FANTOM5 6.86046681454718 chr17 78232717 78232863 78232812 Y NA SLC26A11,SGSH,RNF213 NA NA NA NA RNF213 52 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 78428203 78429274 78428566 Y NA ENDOV,NPTX1 NA NA NA NA NPTX1 20369 CAGE GSS hg19 FANTOM5 6.86046681454718 chr17 78724836 78725014 78724914 Y NA NA NA NA NA NA RPTOR 208217 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 79319812 79320225 79320116 Y FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1 LINC00482,TMEM105 BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM105 17338 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 79358751 79359583 79359338 Y NA NA NA NA NA NA TMEM105 56277 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 79401220 79401344 79401240 Y NA NA NA NA NA NA ACTG1 87529 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 79448388 79448678 79448571 Y NPB,AATK,AZI1,BAHCC1 ACTG1 NA NA NA NA ACTG1 40195 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 79451287 79451558 79451462 Y AATK,AZI1,BAHCC1 ACTG1 NA NA NA NA ACTG1 37315 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 79925685 79926075 79926048 Y TSPAN10 SIRT7,MAFG,MAFG-AS1,PYCR1,NOTUM,ASPSCR1 ASPSCR1 K562,MCF7 ChIA-PET 22265404 ASPSCR1 6608 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 79949658 79950000 79949804 Y SLC25A10,STRA13,LRRC45,FASN,DCXR,PCYT2,NOTUM,ASPSCR1 NOTUM,ASPSCR1,LRRC45,STRA13,RAC3,DCXR NA NA NA NA ASPSCR1 16975 CAGE GSS hg19 FANTOM5 1.52454818101048 chr17 79979263 79979824 79979465 Y NA ASPSCR1,LRRC45,STRA13,RAC3,DCXR,GPS1,RFNG,DUS1L NA NA NA NA LRRC45 85 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 80052713 80052821 80052782 Y MRPL12,SLC25A10,GCGR,PCYT2,ASPSCR1,HEXDC,FOXK2,LRRC45,DCXR,DUS1L,FASN GPS1,RFNG,DUS1L,FASN NA NA NA NA FASN 1387 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 80056613 80056910 80056718 Y C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN RFNG,DUS1L,FASN NA NA NA NA FASN 2405 CAGE GSS hg19 FANTOM5 2.28682227151573 chr17 80188750 80189250 80189000 Y NARF,CSNK1D,C17orf62,SLC16A3,SLC16A3,SLC16A3,SLC16A3,SLC16A3 CCDC57,CSNK1D NA NA NA NA CCDC57 20044 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 80216124 80216440 80216314 Y NA CCDC57,CSNK1D NA NA NA NA CSNK1D 13167 CAGE GSS hg19 FANTOM5 0.762274090505242 chr17 80845276 80845458 80845382 Y C17orf62,C17orf62,NARF,METRNL ZNF750 NA NA NA NA ZNF750 48822 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 666183 666708 666437 Y THOC1,YES1,ENOSF1,ENOSF1 TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 9843 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 667633 668016 667981 Y THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1 TYMS,C18orf56,ENOSF1 NA NA NA NA C18orf56 11293 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 3251422 3251674 3251471 Y MYOM1 MYL12A,MYL12B NA NA NA NA MYL12A 5943 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 3490071 3490183 3490142 Y DLGAP1 NA NA NA NA NA TGIF1 80465 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 3623872 3624258 3624140 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 214266 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 3661317 3661540 3661407 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 251711 CAGE GSS hg19 FANTOM5 3.81137045252621 chr18 3689767 3690120 3689945 Y NA NA NA NA NA NA TGIF1 280161 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 3816827 3817202 3817015 Y TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 407221 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 3842681 3843070 3842877 Y NA NA NA NA NA NA TGIF1 433075 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 4453597 4454207 4453941 Y DLGAP1 DLGAP1 NA NA NA NA DLGAP1 262 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 9219810 9220134 9219877 Y NA NA NA NA NA NA ANKRD12 85584 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 9824351 9824715 9824532 Y PPP4R1,VAPA,RAB31 NA TXNDC2,VAPA IMR90 Hi-C 24141950 VAPA 87284 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 10141033 10141178 10141087 Y NA NA APCDD1,NAPG IMR90 Hi-C 24141950 VAPA 229034 CAGE GSS hg19 FANTOM5 3.04909636202097 chr18 10297142 10297534 10297283 Y NA NA APCDD1,VAPA IMR90 Hi-C 24141950 APCDD1 155091 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 10543130 10543398 10543236 Y NAPG NAPG NA NA NA NA NAPG 19228 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 11005597 11005922 11005792 Y NA NA NA NA NA NA NAPG 481695 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 12808880 12809062 12808971 Y NA NA NA NA NA NA CEP76 108104 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 19373794 19374099 19373861 Y NA NA NA NA NA NA MIB1 90876 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 23836366 23836416 23836389 Y TAF4B TAF4B NA NA NA NA TAF4B 32466 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 28830890 28831119 28831005 Y NA NA NA NA NA NA DSC2 150512 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 34915511 34915689 34915620 Y NA NA NA NA NA NA TPGS2 508353 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 37033966 37034182 37034037 Y NA NA NA NA NA NA RPL7AP66 120327 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 37629293 37629563 37629339 Y NA NA NA NA NA NA RPL7AP66 715654 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 45420480 45420806 45420653 Y NA SMAD2 NA NA NA NA SMAD2 34709 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 46066779 46067121 46067052 Y CTIF CTIF NA NA NA NA CTIF 3362 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 46449093 46449527 46449211 Y SMAD7 NA NA NA NA NA CTIF 385676 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 46502180 46502412 46502333 Y SMAD7 NA SMAD7,CTIF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CTIF 438763 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 47834061 47834491 47834223 Y CCDC11,MBD1,MBD1 MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 21387 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 53041931 53042230 53042160 Y NA NA NA NA NA NA TCF4 287788 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 53060777 53060994 53060923 Y NA NA NA NA NA NA TCF4 269024 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 53072982 53073437 53073370 Y NA NA NA NA NA NA TCF4 256581 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 55109141 55109496 55109318 Y ONECUT2 ONECUT2 NA NA NA NA ONECUT2 8224 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 56537923 56538093 56537956 Y ZNF532 ZNF532 NA NA NA NA ZNF532 10091 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 57572110 57572452 57572282 Y PMAIP1 PMAIP1 NA NA NA NA PMAIP1 6930 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 57585799 57586003 57585903 Y PMAIP1 PMAIP1 NA NA NA NA PMAIP1 20619 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 60193382 60194139 60194065 Y KIAA1468,PHLPP1,ZCCHC2 ZCCHC2 NA NA NA NA ZCCHC2 5142 CAGE GSS hg19 FANTOM5 3.81137045252621 chr18 61033511 61033750 61033687 Y NA BCL2,KDSR NA NA NA NA KDSR 768 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 61085026 61085396 61085214 Y VPS4B VPS4B NA NA NA NA VPS4B 2320 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 65027496 65027665 65027594 Y NA NA NA NA NA NA RTTN 2843516 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 71730939 71731058 71731041 Y FBXO15 NA NA NA NA NA FBXO15 82042 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 71819121 71819367 71819268 Y C18orf55 FBXO15,TIMM21 NA NA NA NA TIMM21 5375 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 72208946 72209159 72209053 Y FAM69C,CNDP1 CNDP2 NA NA NA NA CNDP2 47895 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 72706567 72706772 72706660 Y ZNF407,TSHZ1 NA NA NA NA NA ZADH2 212531 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 73966259 73966767 73966600 Y NA NA NA NA NA NA ZNF516 238379 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 74204839 74205357 74205296 Y NA RP11-17M16.1 NA NA NA NA ZNF516 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 74214607 74214778 74214699 Y NA ZNF516,RP11-17M16.1 ZNF516 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-17M16.1 9130 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 74829789 74830209 74830033 Y MBP NA NA NA NA NA ZNF236 297226 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 74830215 74830809 74830560 Y MBP NA NA NA NA NA ZNF236 297652 CAGE GSS hg19 FANTOM5 1.52454818101048 chr18 75149077 75149342 75149210 Y NA NA NA NA NA NA ZNF236 616514 CAGE GSS hg19 FANTOM5 0.762274090505242 chr18 76433028 76433250 76433148 Y NA NA SALL3 IMR90 Hi-C 24141950 ATP9B 394035 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 555976 556322 556024 Y NA CDC34,BSG,HCN2 NA NA NA NA BSG 12975 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 934999 935434 935086 Y MIDN,CIRBP MED16,RNU6-9,R3HDM4,ARID3A,WDR18 NA NA NA NA ARID3A 11218 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 947564 948104 947641 Y SBNO2,SBNO2,MIDN,HMHA1,C19orf6 R3HDM4,ARID3A,WDR18 NA NA NA NA ARID3A 23783 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 953220 953565 953383 Y EFNA2,MADCAM1,KISS1R,ARID3A R3HDM4,ARID3A,WDR18 NA NA NA NA WDR18 27609 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 958944 959162 959060 Y NA R3HDM4,ARID3A,WDR18 NA NA NA NA WDR18 22012 CAGE GSS hg19 FANTOM5 3.81137045252621 chr19 1240232 1240534 1240365 Y MUM1,APC2,C19orf26 C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA ATP5D 483 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 1260732 1261171 1260912 Y NA C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2 NA NA NA NA CIRBP 3348 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 1651371 1651730 1651556 Y NA UQCR11,TCF3 NA NA NA NA TCF3 767 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 1672372 1672532 1672504 Y NA TCF3 TCF3,ONECUT3,REXO1,LOC100288123,ATP8B3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TCF3 21768 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 1725719 1725877 1725796 Y C19orf26,MUM1,APC2 NA TCF3,C19orf25,ONECUT3,PLK5,UQCR11,ATP8B3,LOC100288123,REXO1 IMR90 Hi-C 24141950 TCF3 75115 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 2059605 2060167 2060113 Y REXO1,FAM108A1,SCAMP4,ADAT3,BTBD2 BTBD2,MKNK2,MOB3A NA NA NA NA MKNK2 10362 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 2061356 2061737 2061654 Y SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A BTBD2,MKNK2,MOB3A NA NA NA NA MKNK2 12113 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 2165096 2165788 2165320 Y REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L DOT1L,AP3D1 NA NA NA NA AP3D1 2632 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 2391233 2391395 2391314 Y NA TIMM13 NA NA NA NA TIMM13 34497 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 2494705 2495117 2494880 Y DOT1L,GADD45B LMNB2,GADD45B NA NA NA NA GADD45B 20585 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 2540691 2541097 2540881 Y TIMM13 NA NA NA NA NA GADD45B 66571 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 2543618 2543970 2543682 Y DOT1L,GADD45B NA NA NA NA NA GADD45B 69498 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 2599036 2599584 2599134 Y DOT1L,GADD45B NA NA NA NA NA GNG7 101123 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 2926811 2926963 2926923 Y NA ZNF57,ZNF77,TLE6 NA NA NA NA ZNF77 16006 CAGE GSS hg19 FANTOM5 4.57364454303145 chr19 3035530 3035851 3035686 Y NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2 TLE2,AES NA NA NA NA TLE2 9782 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 3398670 3398894 3398830 Y NA NFIC NA NA NA NA NFIC 41109 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 3548609 3549021 3548873 Y GNA15,S1PR4,FZR1,PIAS4 DOHH,FZR1,HMG20B,MFSD12 NA NA NA NA HMG20B 21754 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 3687832 3687894 3687862 Y FZR1,APBA3 PIP5K1C NA NA NA NA PIP5K1C 10583 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 4063699 4063930 4063813 Y NA ZBTB7A NA NA NA NA ZBTB7A 1013 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 5336072 5336705 5336347 Y PTPRS PTPRS NA NA NA NA PTPRS 2109 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 5339517 5339797 5339748 Y HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L,PTPRS PTPRS NA NA NA NA PTPRS 703 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 5804044 5804378 5804211 Y NA DUS3L NDUFA11,DUS3L,NRTN,LONP1,CATSPERD,RANBP3,LOC100128568,FUT6,VMAC,PRR22,FUT3,RFX2,FUT5,CAPS K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 DUS3L 14795 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 6108978 6109271 6109224 Y NA NA NA NA NA NA RANBP3 132825 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 6516969 6517178 6517079 Y NA TUBB4A,TNFSF9 TNFSF9 K562 ChIA-PET 22265404 TNFSF9 11832 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 6766042 6766297 6766158 Y NA TRIP10,SH2D3A,VAV1 NA NA NA NA SH2D3A 443 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 7701239 7701460 7701364 Y NA CAMSAP3,XAB2,STXBP2,C19orf59,TRAPPC5 NA NA NA NA STXBP2 1472 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 7756040 7757119 7756175 Y ARHGEF18,FBN3,MAP2K7,FLJ22184,EVI5L,FCER2,FCER2 C19orf59,TRAPPC5 NA NA NA NA TRAPPC5 12311 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 8226134 8226320 8226231 Y NA CERS4 FBN3,TIMM44 IMR90 Hi-C 24141950 CERS4 43300 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 8518703 8518940 8518821 Y NA MARCH2,HNRNPM NA NA NA NA HNRNPM 11052 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 9896233 9896620 9896495 Y ZNF266,COL5A3,ZNF846 FBXL12,UBL5,PIN1 NA NA NA NA FBXL12 39872 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 10304383 10304612 10304534 Y TYK2,KRI1,ILF3 S1PR2,DNMT1 PPAN-P2RY11,EIF3G MCF7 ChIA-PET 22265404 S1PR2 35336 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 11878639 11879058 11878901 Y NA ZNF823,ZNF441,ZNF491,ZNF440 NA NA NA NA ZNF441 2824 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 12404552 12404928 12404719 Y ZNF791,ZNF564,ZNF490,WDR83,JUNB,ZNF700,ZNF763,ZNF136,ZNF799,ZNF443,ZNF563,ZNF44 CTD-2666L21.3,ZNF44 NA NA NA NA ZNF44 850 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 12888910 12889352 12889266 Y NA C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 10958 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 12899457 12901460 12900777 Y NA PRDX2,RNASEH2A,MAST1 NA NA NA NA JUNB 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 13164647 13164970 13164763 Y NA NA NA NA NA NA NFIX 60225 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 13266326 13267156 13266576 Y MAN2B1,C19orf43,JUNB,DNASE2,LYL1,STX10 TRMT1,NACC1,STX10,IER2 NA NA NA NA IER2 7097 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 13278382 13278991 13278445 Y BEST2,JUNB,LYL1,STX10 STX10,IER2 NA NA NA NA IER2 19153 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 13944359 13944683 13944571 Y CCDC130,RFX1,PRKACA,IL27RA,DCAF15 ZSWIM4 NA NA NA NA ZSWIM4 40085 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 13954357 13954714 13954441 Y NA NA NA NA NA NA ZSWIM4 50083 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 13975574 13976059 13975671 Y CACNA1A,LPHN1,CC2D1A,C19orf57 CC2D1A,C19orf57 NA NA NA NA CC2D1A 38955 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 14276845 14277176 14277145 Y NA PRKACA,ASF1B NA NA NA NA ASF1B 31077 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 15334094 15334476 15334286 Y SLC1A6,WIZ NOTCH3 NA NA NA NA NOTCH3 24302 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 15947617 15948119 15947980 Y AKAP8,AKAP8L,RASAL3,OR10H3,OR10H4,RAB8A,KLF2,AP1M1 NA NA NA NA NA CYP4F11 95558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 17345747 17345835 17345791 Y NA USE1,OCEL1,NR2F6,BABAM1 NA NA NA NA NR2F6 8914 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 18395702 18395850 18395798 Y NA JUND,LSM4 NA NA NA NA JUND 5270 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 18497624 18497977 18497708 Y PDE4C,GDF15 PGPEP1,GDF15,SSBP4,ISYNA1 NA NA NA NA GDF15 14083 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 18528263 18528792 18528577 Y UPF1,ARRDC2,ARRDC2,IFI30,PGPEP1,UBA52,C19orf60,LRRC25,SSBP4 GDF15,SSBP4,ISYNA1 NA NA NA NA SSBP4 589 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 18760437 18760612 18760525 Y NA TMEM59L,CRLF1,KLHL26,CRTC1 NA NA NA NA KLHL26 14662 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 18960289 18960480 18960366 Y NA UPF1 NA NA NA NA UPF1 19542 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 29196051 29196136 29196055 Y NA NA NA NA NA NA UQCRFS1 506312 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 30447917 30448294 30448014 Y NA URI1 NA NA NA NA URI1 35366 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 31705006 31705320 31705186 Y NA NA TSHZ3 IMR90 Hi-C 24141950 ZNF507 1129180 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 34310855 34311133 34311012 Y NA KCTD15 NA NA NA NA KCTD15 26017 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 34311417 34311691 34311576 Y KCTD15 KCTD15 NA NA NA NA KCTD15 26579 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 34850085 34850642 34850351 Y ZNF599,ZNF302,ZNF181 GPI,PDCD2L NA NA NA NA GPI 1700 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 36193251 36193562 36193412 Y USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33 UPK1A-AS1,IGFLR1,PSENEN,U2AF1L4,LIN37 MLL4,ZBTB32 K562 ChIA-PET 22265404 UPK1A-AS1 31058 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 36618643 36619171 36618835 Y NA TBCB,POLR2I,CAPNS1 NA NA NA NA CAPNS1 9306 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 36666444 36666524 36666464 Y NA CAPNS1,ZNF146 NA NA NA NA ZNF146 36980 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 36720266 36720641 36720459 Y ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF382,ZNF260,ZFP14,ZNF565,ZNF565 ZNF146,ZNF565 NA NA NA NA ZNF565 14518 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 37942009 37942313 37942161 Y ZNF420,ZNF585B,ZNF527,ZNF781,ZNF607,ZNF607,ZNF573,ZNF571,ZNF540,ZNF540,ZFP30,ZNF793,ZNF570,ZNF569 NA NA NA NA NA ZNF527 82046 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 39149253 39149575 39149354 Y SPINT2,C19orf33,PAK4,ACTN4 EIF3K,ACTN4 NA NA NA NA ACTN4 12964 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 39184148 39184440 39184342 Y C19orf33,PSMD8,PAK4,MRPS12,MRPS12,FBXO27,ACTN4 ACTN4 NA NA NA NA ACTN4 47859 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 41108162 41108528 41108432 Y NA SHKBP1 NA NA NA NA SHKBP1 27405 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 41109606 41110134 41110046 Y SERTAD1,ITPKC,EGLN2,EGLN2,C19orf54,ADCK4,SHKBP1 SHKBP1 NA NA NA NA SHKBP1 28849 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 41267029 41267391 41267210 Y NA ITPKC,ADCK4,SNRPA,C19orf54,MIA,RAB4B,EGLN2 NA NA NA NA MIA 8162 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 41304071 41304255 41304136 Y SERTAD1,SERTAD3,SHKBP1,ADCK4,ADCK4,RAB4B,HNRNPUL1 SNRPA,C19orf54,MIA,RAB4B,EGLN2 NA NA NA NA EGLN2 1170 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 41681944 41682199 41682187 Y NA RPL36P16,CYP2S1 CYP2B7P1,HNRNPUL1,CYP2A13,CYP2F1,CCDC97,BCKDHA,B3GNT8 IMR90 Hi-C 24141950 RPL36P16 8178 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 41814398 41814719 41814610 Y HNRNPUL1,TMEM91,TGFB1,CCDC97,B9D2 HNRNPUL1,CCDC97,TMEM91,TGFB1 NA NA NA NA CCDC97 304 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 42444277 42444712 42444407 Y POU2F2,CD79A,ARHGEF1,ARHGEF1 RABAC1 NA NA NA NA RABAC1 16830 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 42493914 42494230 42494205 Y TMEM145,MEGF8,GRIK5,ATP1A3 RABAC1,ATP1A3 NA NA NA NA ATP1A3 5419 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 42750338 42750718 42750490 Y NA DEDD2,ZNF526,GSK3A,ERF,CIC NA NA NA NA GSK3A 5561 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 42772804 42773312 42773020 Y CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE GSK3A,ERF,CIC,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 CIC 2115 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 45393623 45393866 45393750 Y ZNF285,ZNF180,GEMIN7,GEMIN7,CLASRP,TOMM40 PVRL2,TOMM40 NA NA NA NA TOMM40 1797 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 45663964 45664347 45664315 Y NA TRAPPC6A,BLOC1S3 NA NA NA NA TRAPPC6A 15148 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 45844650 45844836 45844820 Y FBXO46,PPP1R13L KLC3,ERCC2 NA NA NA NA KLC3 9958 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 45946690 45947113 45946759 Y GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2 K562,MCF7 ChIA-PET 22265404 FOSB 22140 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 45953764 45954783 45954182 Y NA CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 14470 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 45954905 45955186 45955133 Y GIPR,RELB,CLASRP,TRAPPC6A,BLOC1S3,PPM1N,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2 FOSB IMR90 Hi-C 24141950 FOSB 14067 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 46012498 46012899 46012640 Y FBXO46,CLASRP,ZNF296,BLOC1S3,VASP FOSB,ERCC1,PPM1N,RTN2,VASP NA NA NA NA VASP 4661 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 46385401 46385465 46385433 Y NA SYMPK,IRF2BP1,MYPOP NA NA NA NA IRF2BP1 1911 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 47363167 47364689 47363471 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562 ChIA-PET 22265404 AP2S1 10918 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 47746329 47746738 47746506 Y SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24 MIR3191,BBC3,CCDC9 NA NA NA NA CCDC9 10499 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 47776748 47776969 47776841 Y GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1 MIR3191,BBC3,CCDC9 NA NA NA NA CCDC9 19511 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 47867147 47867265 47867191 Y ZC3H4,CCDC9,C5AR1,GPR77,NAPA,DHX34 DHX34 NA NA NA NA DHX34 16609 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 49092091 49092636 49092297 Y BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11 SULT2B1,SPHK2,RPL18,DBP NA NA NA NA SPHK2 27912 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 49466802 49467527 49467169 Y IZUMO1,PPP1R15A,CD37,FTL DHDH,BAX,FTL,GYS1,RUVBL2 NA NA NA NA FTL 244 CAGE GSS hg19 FANTOM5 3.04909636202097 chr19 50833837 50834367 50834143 Y MYH14,GPR32,SYT3,SYT3,SHANK1,LRRC4B,ASPDH,KCNC3 NR1H2,KCNC3 NA NA NA NA KCNC3 405 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 50990086 50990332 50990328 Y NA FAM71E1,JOSD2 NA NA NA NA FAM71E1 12076 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 51059944 51060288 51060130 Y NA JOSD2,LRRC4B NA NA NA NA LRRC4B 9014 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 51339255 51339614 51339393 Y KLK14,IGLON5,LRRC4B,SYT3,SYT3 C19orf48,KLK1 NA NA NA NA KLK1 14212 CAGE GSS hg19 FANTOM5 4.57364454303145 chr19 52192085 52192767 52192400 Y ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577 MIRLET7E NA NA NA NA MIRLET7E 1272 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 55917170 55917359 55917333 Y U2AF2,SUV420H2,COX6B2,UBE2S TMEM238,RPL28,UBE2S NA NA NA NA UBE2S 25 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 55962647 55962935 55962813 Y SYT5,BRSK1,ZNF580,SHISA7 UBE2S,ISOC2,ZNF628,NAT14 NA NA NA NA ISOC2 8775 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 55983917 55984059 55984005 Y RDH13,HSPBP1,ISOC2 ISOC2,ZNF628,NAT14 ZNF628,ISOC2 K562,MCF7 ChIA-PET 22265404 ZNF628 1640 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 56097081 56097467 56097273 Y NA ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581 SSC5D,SGK110,SBK2,ZNF579 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF579 6870 CAGE GSS hg19 FANTOM5 1.52454818101048 chr19 56098668 56099098 56098905 Y NA ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581 SSC5D,SGK110,SBK2,ZNF579 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF579 8457 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 56116208 56117068 56116734 Y NA ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2 NA NA NA NA FIZ1 4872 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 58218479 58218613 58218485 Y ZNF543,ZNF304,ZNF548,ZNF17,VN1R1,ZNF772,ZNF419,ZNF773,ZNF549,ZNF416,ZIK1,ZNF134,ZSCAN4,ZNF551,ZSCAN18,ZSCAN1,ZNF814,ZNF606,ZNF418,ZNF256,ZNF135,LOC100293516,ZNF671,ZNF586,ZNF154 ZNF551,ZNF776 NA NA NA NA ZNF551 27142 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 58321012 58321020 58321017 Y VN1R1,ZNF211,ZNF587,ZNF417,ZNF776,ZNF586,ZNF552 ZNF586,ZNF552,ZNF587 NA NA NA NA ZNF552 3261 CAGE GSS hg19 FANTOM5 0.762274090505242 chr19 58912594 58912944 58912773 Y ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324 A1BG,ZNF497,RPS5,ZNF584,ZNF324B NA NA NA NA ZNF584 1723 CAGE GSS hg19 FANTOM5 2.28682227151573 chr19 59087419 59087864 59087514 Y NA ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1 NA NA NA NA MZF1 4477 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 1722150 1722351 1722236 Y NA NA NA NA NA NA TMEM18 1046711 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 2617084 2617480 2617333 Y NA NA NA NA NA NA TSSC1 762173 CAGE GSS hg19 FANTOM5 6.86046681454718 chr2 2850815 2851100 2850821 Y NA NA NA NA NA NA TSSC1 528553 CAGE GSS hg19 FANTOM5 4.57364454303145 chr2 10260365 10260994 10260486 Y ODC1,TAF1B,RRM2,RRM2 CYS1 NA NA NA NA RRM2 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 10950898 10951279 10951023 Y NA PDIA6 ATP6V1C2 IMR90 Hi-C 24141950 PDIA6 24824 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 17719194 17719451 17719323 Y MSGN1 VSNL1 NA NA NA NA VSNL1 801 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 19325543 19325927 19325740 Y NA NA MIR4757,FLJ12334,OSR1 IMR90 Hi-C 24141950 RDH14 585597 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 25554693 25554929 25554813 Y NA NA NA NA NA NA DTNB 339574 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 26241064 26241266 26241191 Y RAB10 KIF3C,RAB10 ASXL2,RAB10,FAM59B,HADHB,KIF3C,HADHA IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RAB10 13710 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 27304052 27304486 27304234 Y CENPA,CENPA,DPYSL5,SLC5A6,PPM1G,GTF3C2,CAD,CGREF1 AGBL5,OST4,KHK,CGREF1,ABHD1 NA NA NA NA KHK 3129 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 28024813 28024890 28024852 Y IFT172,ZNF512,GPN1,CCDC121,GPN1,CCDC121,SLC4A1AP,SUPT7L,MRPL33 MRPL33 NA NA NA NA MRPL33 32229 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 29803354 29803753 29803678 Y ALK NA NA NA NA NA CLIP4 484783 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 37103475 37103824 37103655 Y NA NA NA NA NA NA STRN 87791 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 37827811 37828357 37828118 Y EIF2AK2,EIF2AK2,QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 135254 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 37897080 37897760 37897461 Y QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 65851 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 38369402 38369882 38369670 Y NA CYP1B1 NA NA NA NA CYP1B1 34358 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 38380770 38381135 38380953 Y CDC42EP3,FAM82A1,CYP1B1 CYP1B1 NA NA NA NA CYP1B1 45726 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 38405386 38405542 38405477 Y CYP1B1 NA NA NA NA NA RPL7P12 51168 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 42046531 42047126 42046845 Y PKDCC NA NA NA NA NA EML4 347364 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 42696554 42696964 42696742 Y NA COX7A2L,KCNG3,MTA3 NA NA NA NA KCNG3 22273 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 43037224 43037999 43037611 Y NA NA THADA,ZFP36L2,LOC100129726,HAAO IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MTA3 317515 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 43385938 43386506 43386186 Y OXER1,ZFP36L2 NA THADA,LOC100129726,ZFP36L2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 65242 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 43422005 43422472 43422185 Y THADA,THADA,ZFP36L2 ZFP36L2 ZFP36L2,LOC100129726,THADA K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZFP36L2 29276 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 44542790 44543096 44543052 Y SLC3A1 AC013717.3,PREPL,CAMKMT NA NA NA NA PREPL 43905 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 46265425 46265774 46265513 Y NA NA NA NA NA NA EPAS1 253032 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 47229826 47230084 47229931 Y TTC7A NA NA NA NA NA MCFD2 62832 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 47306951 47307378 47307182 Y NA NA NA NA NA NA CALM2 94362 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 58334895 58335527 58335141 Y VRK2,VRK2,VRK2 NA NA NA NA NA FANCL 130980 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 60711222 60711498 60711369 Y REL NA NA NA NA NA BCL11A 67204 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 61133049 61133418 61133217 Y NA REL NA NA NA NA REL 26393 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 61991278 61991660 61991557 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM161A 87618 CAGE GSS hg19 FANTOM5 3.04909636202097 chr2 64978173 64978610 64978385 Y CEP68 SERTAD2 SERTAD2,LOC339807,AFTPH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 2034 CAGE GSS hg19 FANTOM5 3.04909636202097 chr2 65303160 65303240 65303200 Y SERTAD2,SLC1A4,ACTR2,RAB1A CEP68 NA NA NA NA CEP68 21660 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 67625110 67625487 67625291 Y ETAA1 ETAA1 NA NA NA NA ETAA1 2659 CAGE GSS hg19 FANTOM5 2.28682227151573 chr2 68278313 68278683 68278526 Y NA NA NA NA NA NA C1D 57397 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 69989990 69990667 69990520 Y NA NA GMCL1 IMR90 Hi-C 24141950 GMCL1 64107 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 70285414 70285703 70285559 Y NA PCBP1,PCBP1-AS1,AC016700.4 NA NA NA NA PCBP1 26882 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 72732418 72732763 72732614 Y NA NA NA NA NA NA EXOC6B 318407 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 72980109 72980387 72980306 Y NA NA NA NA NA NA EXOC6B 70783 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 73774930 73775287 73775109 Y NA NA NA NA NA NA ALMS1 164044 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 75836166 75836348 75836343 Y NA MRPL19 FAM176A,TACR1 IMR90 Hi-C 24141950 MRPL19 35561 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 75894065 75894458 75894192 Y NA MRPL19,GCFC2 NA NA NA NA MRPL19 22156 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 81709176 81709459 81709306 Y NA NA NA NA NA NA AC016716.1 1320915 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 81781528 81781694 81781559 Y NA NA NA NA NA NA AC016716.1 1393267 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 85887180 85887589 85887391 Y SH2D6,SFTPB C2orf68 NA NA NA NA C2orf68 49991 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 97291626 97292008 97291852 Y NA KANSL3 NA NA NA NA KANSL3 14516 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 103038381 103038663 103038448 Y IL1R2,IL18RAP NA NA NA NA NA MFSD9 312684 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 105489803 105490153 105490078 Y GPR45,POU3F3 NA NA NA NA NA MRPS9 162288 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 106761137 106761371 106761251 Y NCK2 UXS1 NA NA NA NA UXS1 47424 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 109506497 109506716 109506551 Y LIMS1,CCDC138,EDAR NA NA NA NA NA EDAR 97112 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 109706111 109706459 109706286 Y NA NA EDAR,SEPT10,SH3RF3,LOC100287216 IMR90 Hi-C 24141950 EDAR 102283 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 109883526 109883741 109883650 Y NA NA NA NA NA NA EDAR 279698 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 109934621 109934818 109934675 Y NA NA NA NA NA NA EDAR 330793 CAGE GSS hg19 FANTOM5 3.04909636202097 chr2 110318153 110318301 110318244 Y NA NA NA NA NA NA SEPT10 51482 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 113058633 113059002 113058901 Y NA ZC3H8,ZC3H6 NA NA NA NA ZC3H6 27462 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 114082449 114082815 114082523 Y NA NA PAX8,LOC654433 IMR90 Hi-C 24141950 RABL2A 299991 CAGE GSS hg19 FANTOM5 3.81137045252621 chr2 114126317 114126521 114126419 Y IL1F10,IL1F10 NA PAX8,LOC654433,IL1RN,PSD4 IMR90 Hi-C 24141950 RABL2A 256285 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 118309015 118309417 118309218 Y NA NA NA NA NA NA DDX18 260809 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 118722673 118722961 118722817 Y NA CCDC93 NA NA NA NA CCDC93 46748 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 140977991 140978216 140978106 Y NA NA NA NA NA NA SPOPL 1720620 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 143809081 143809289 143809162 Y KYNU NA NA NA NA NA GTDC1 1278846 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 149267026 149267240 149267133 Y EPC2 NA NA NA NA NA EPC2 132769 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 150314581 150314916 150314749 Y NA NA NA NA NA NA MMADHC 127414 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 151330104 151330756 151330441 Y NA NA NA NA NA NA RND3 62769 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 157190328 157191531 157191235 Y GPD2,NR4A2 NR4A2 GPD2 IMR90 Hi-C 24141950 NR4A2 5329 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 158102968 158103210 158103130 Y NA NA NR4A2,GALNT5 IMR90 Hi-C 24141950 ACVR1C 380307 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 159853491 159853713 159853657 Y NA TANC1 NA NA NA NA TANC1 30345 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 160371940 160372153 160372033 Y MARCH7,LY75,CD302,BAZ2B NA NA NA NA NA AC009506.2 54173 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 161155946 161156394 161156280 Y NA NA NA NA NA NA MIR4785 105999 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 161348201 161348679 161348535 Y RBMS1 NA NA NA NA NA RBMS1 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 169347640 169347834 169347737 Y NA CERS6 NA NA NA NA CERS6 37268 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 169434382 169434732 169434541 Y NA NA NA NA NA NA CERS6 124010 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 172649817 172649933 172649875 Y NA NA NA NA NA NA DYNC1I2 107898 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 172961367 172961608 172961457 Y DLX1,DLX2 DLX1,DLX2 NA NA NA NA DLX2 4020 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 173302497 173302807 173302540 Y NA ITGA6 NA NA NA NA ITGA6 12415 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 175708423 175708587 175708507 Y NA NA NA NA NA NA CHRNA1 81223 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 187015061 187015446 187015349 Y NA NA NA NA NA NA ZC3H15 333437 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 187263813 187264095 187263899 Y NA NA NA NA NA NA ZC3H15 84788 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 191180126 191180403 191180265 Y NA INPP1,HIBCH NA NA NA NA INPP1 25793 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 191324757 191324843 191324828 Y NA NA NA NA NA NA MFSD6 53676 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 191492626 191492865 191492683 Y INPP1,STAT1,NAB1 NAB1 MFSD6 IMR90 Hi-C 24141950 NAB1 16607 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 192071077 192071476 192071425 Y STAT4 MYO1B MYO1B,STAT4 IMR90 Hi-C 24141950 MYO1B 36435 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 192170125 192170408 192170266 Y NA NA NA NA NA NA MYO1B 62214 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 201978583 201978718 201978642 Y CLK1,CLK1,TRAK2,STRADB,CFLAR,CFLAR,CFLAR,CASP8,FAM126B,CFLAR NDUFB3,FAM126B,AC007272.3,CFLAR NA NA NA NA CFLAR 109 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 201989489 201990098 201989672 Y BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10 AC007272.3,CFLAR NA NA NA NA CFLAR 10662 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 203159775 203160145 203159798 Y NA NOP58 NA NA NA NA NOP58 31336 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 204315265 204315638 204315451 Y NA NA NA NA NA NA RAPH1 82495 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 204393119 204393487 204393303 Y NA RAPH1 NA NA NA NA RAPH1 4646 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 206948392 206948813 206948647 Y NA INO80D NA NA NA NA INO80D 214 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 213400949 213401339 213401014 Y ERBB4 ERBB4 NA NA NA NA ERBB4 226 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 213401643 213402097 213401658 Y NA ERBB4 NA NA NA NA ERBB4 78 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 216865894 216866240 216866102 Y TMEM169,PECR,MREG MREG NA NA NA NA MREG 30579 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 217936161 217936583 217936312 Y NA NA DIRC3,IGFBP5 IMR90 Hi-C 24141950 IGFBP2 440610 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 219270976 219271406 219271230 Y CXCR2,CXCR2,CXCR1,ZNF142,USP37,TTLL4,SLC11A1 CTDSP1 NA NA NA NA CTDSP1 9997 CAGE GSS hg19 FANTOM5 1.52454818101048 chr2 219773515 219774011 219773826 Y USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A CDK5R2 NA NA NA NA CDK5R2 48366 CAGE GSS hg19 FANTOM5 3.81137045252621 chr2 219827943 219828258 219828078 Y USP37,STK36,PTPRN,PTPRN,CDK5R2,FEV CDK5R2 NA NA NA NA CDK5R2 5566 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 220400310 220400471 220400469 Y NA GMPPA,TMEM198,CHPF,OBSL1 NA NA NA NA TMEM198 5914 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 221802042 221802413 221802264 Y NA NA NA NA NA NA EPHA4 634509 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 227665859 227666449 227665964 Y NA IRS1,RHBDD1 NA NA NA NA IRS1 3384 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 231276384 231276790 231276706 Y NA SP100 NA NA NA NA SP100 1867 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 231922388 231922877 231922602 Y NA C2orf72,PSMD1 NA NA NA NA PSMD1 2810 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 232468888 232470128 232469532 Y DIS3L2,PTMA,NMUR1 NA NA NA NA NA PTMA 99477 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 232478392 232478857 232478528 Y DIS3L2,PTMA NA NA NA NA NA PTMA 90748 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 232478879 232479328 232479053 Y NA NA NA NA NA NA PTMA 90277 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 232507409 232507767 232507481 Y NA NA PDE6D IMR90 Hi-C 24141950 PTMA 61838 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 232530920 232531416 232531295 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 38189 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 232545684 232546083 232545868 Y COPS7B PTMA PTMA K562 ChIA-PET 22265404 PTMA 23522 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 234630754 234630813 234630784 Y NA NA NA NA NA NA HJURP 130399 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 235392262 235392984 235392812 Y ARL4C ARL4C NA NA NA NA ARL4C 10713 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 239426928 239427234 239427055 Y TWIST2 NA NA NA NA NA ASB1 93545 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 239625320 239625470 239625387 Y NA NA LOC151171,TRAF3IP1 IMR90 Hi-C 24141950 ASB1 291937 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 240168373 240168774 240168689 Y NA NA NA NA NA NA AC062017.1 152356 CAGE GSS hg19 FANTOM5 2.28682227151573 chr2 240196255 240196671 240196554 Y HDAC4 NA NA NA NA NA AC062017.1 124459 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 240201720 240202445 240202126 Y NA NA NA NA NA NA AC062017.1 118685 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 240321591 240321797 240321685 Y HDAC4 AC062017.1,HDAC4 NA NA NA NA HDAC4 243 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 241519364 241519647 241519506 Y NA DUSP28,RNPEPL1,ANKMY1,CAPN10 NA NA NA NA CAPN10 4486 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 241719463 241720148 241720097 Y ANKMY1,AQP12B,AQP12A,KIF1A KIF1A NA NA NA NA KIF1A 37577 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 242050705 242051124 242050885 Y NA MTERFD2,PPP1R7,PASK NA NA NA NA MTERFD2 10958 CAGE GSS hg19 FANTOM5 0.762274090505242 chr2 242262018 242262304 242262161 Y NA SEPT2,HDLBP,FARP2 NA NA NA NA HDLBP 7542 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 247683 247718 247701 Y NA C20orf96,ZCCHC3,AL034548.1 NA NA NA NA C20orf96 21672 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 483361 483443 483402 Y NA TBC1D20,CSNK2A1 NA NA NA NA CSNK2A1 39022 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 823028 823308 823133 Y FAM110A FAM110A NA NA NA NA FAM110A 10670 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 1124805 1124974 1124890 Y SCRT2,C20orf202,C20orf46 PSMF1,TMEM74B NA NA NA NA PSMF1 32899 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 1167289 1167675 1167648 Y NA TMEM74B NA NA NA NA TMEM74B 3230 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 2090589 2090758 2090698 Y NA STK35 NA NA NA NA STK35 10332 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 3932717 3933076 3932937 Y NA NA MIR103B2,PANK2 IMR90 Hi-C 24141950 RNF24 61153 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 5825010 5825403 5825098 Y NA NA NA NA NA NA C20orf196 95971 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 9089602 9089856 9089687 Y NA PLCB4 NA NA NA NA PLCB4 42192 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 15282242 15282264 15282251 Y NA NA NA NA NA NA KIF16B 1269814 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 17637776 17637930 17637851 Y BANF2 RRBP1 NA NA NA NA RRBP1 23010 CAGE GSS hg19 FANTOM5 1.52454818101048 chr20 18276093 18276447 18276109 Y CSRP2BP ZNF133 NA NA NA NA ZNF133 8972 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 18565876 18566072 18565973 Y CSRP2BP,ZNF133,POLR3F,SEC23B,SEC23B,SEC23B,DTD1 LINC00493,DTD1 NA NA NA NA DTD1 465 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 21147247 21147656 21147458 Y NA PLK1S1 NA NA NA NA PLK1S1 42623 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 21496280 21496657 21496603 Y NKX2-2 NA NA NA NA NA XRN2 214338 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 22555806 22556424 22556290 Y NA FOXA2 NA NA NA NA FOXA2 7669 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 23123782 23124035 23123853 Y NA NA LOC200261 IMR90 Hi-C 24141950 NXT1 205338 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 23347147 23347295 23347221 Y THBD,CD93,GZF1 NXT1,RP3-322G13.7,RP3-322G13.5,GZF1 NA NA NA NA GZF1 6360 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 23360936 23361138 23361045 Y SSTR4,NAPB NXT1,RP3-322G13.7,RP3-322G13.5,GZF1,NAPB NA NA NA NA GZF1 20149 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 24709936 24710315 24710275 Y NA NA NA NA NA NA ACSS1 327301 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 25214082 25214352 25214216 Y ENTPD6,PYGB ENTPD6,PYGB NA NA NA NA PYGB 12353 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 25227906 25228088 25227908 Y NA PYGB NA NA NA NA PYGB 1201 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 25671297 25671837 25671511 Y NA ZNF337 NA NA NA NA ZNF337 3640 CAGE GSS hg19 FANTOM5 3.81137045252621 chr20 26293734 26293919 26293899 Y NA NA NA NA NA NA RP13-401N8.1 563880 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 29647996 29648434 29648295 Y DEFB121,DEFB116 FRG1B NA NA NA NA FRG1B 38139 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 30175524 30175854 30175562 Y NA ID1 NA NA NA NA ID1 15232 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 30191850 30192346 30192159 Y ID1 ID1 NA NA NA NA ID1 764 CAGE GSS hg19 FANTOM5 1.52454818101048 chr20 30249247 30249862 30249570 Y TTLL9 NA NA NA NA NA ID1 58161 CAGE GSS hg19 FANTOM5 3.04909636202097 chr20 30307720 30308274 30308104 Y POFUT1 BCL2L1,TPX2 NA NA NA NA BCL2L1 1518 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 32093960 32094027 32093984 Y NA CBFA2T2 NA NA NA NA CBFA2T2 18079 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 33263826 33263865 33263846 Y MYH7B PIGU,TP53INP2 NA NA NA NA PIGU 916 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 34217204 34217560 34217502 Y NA SPAG4,CPNE1,RBM12 NA NA NA NA SPAG4 15390 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 34566043 34566286 34566130 Y RBM39 SCAND1 NA NA NA NA SCAND1 20649 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 34790985 34791133 34791034 Y NA NA NA NA NA NA DLGAP4 101125 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 35083291 35083376 35083331 Y EPB41L1,DLGAP4,NDRG3,KIAA0889,KIAA0889 NA NA NA NA NA RP5-977B1.7 116418 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 35305263 35305453 35305359 Y NA NA NA NA NA NA NDRG3 67028 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 35305679 35305903 35305811 Y NA NA NA NA NA NA NDRG3 66578 CAGE GSS hg19 FANTOM5 3.04909636202097 chr20 35362274 35362463 35362369 Y NA NDRG3,DSN1 NA NA NA NA NDRG3 10018 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 35464098 35464342 35464182 Y RBL1,DSN1,DSN1 NA NA NA NA NA DSN1 63877 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 35490387 35490628 35490526 Y MANBAL,KIAA0889 NA KIAA0889 MCF7 ChIA-PET 22265404 SAMHD1 87618 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 36040005 36040428 36040132 Y VSTM2L,NNAT RPL7AP14 NA NA NA NA RPL7AP14 31508 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 36040566 36040861 36040811 Y NA RPL7AP14 NA NA NA NA RPL7AP14 31075 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 36298725 36299073 36298903 Y C20orf132 CTNNBL1 VSTM2L,LOC100287792,RPN2,CTNNBL1,TTI1,LBP IMR90 Hi-C 24141950 CTNNBL1 21335 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 36534418 36534720 36534476 Y NA VSTM2L NA NA NA NA VSTM2L 4919 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 36806705 36806912 36806781 Y CTNNBL1,RPRD1B,BPI NA TGM2,TTI1,RPRD1B,KIAA1755 IMR90 Hi-C 24141950 KIAA1755 80262 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 37398577 37398739 37398665 Y NA ACTR5,PPP1R16B NA NA NA NA ACTR5 23492 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 40321359 40321668 40321514 Y NA NA CHD6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD6 76226 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 40466540 40466641 40466591 Y NA NA PTPRT IMR90 Hi-C 24141950 CHD6 221407 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 42096541 42096705 42096586 Y NA SRSF6 NA NA NA NA SRSF6 11973 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 42286061 42286420 42286177 Y SRSF6,L3MBTL1,MYBL2 RPL27AP,MYBL2 MYBL2 IMR90 Hi-C 24141950 RPL27AP 6898 CAGE GSS hg19 FANTOM5 3.04909636202097 chr20 42828501 42828745 42828623 Y NA OSER1-AS1 NA NA NA NA OSER1-AS1 8855 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 42938917 42939166 42938990 Y NA FITM2 GDAP1L1 IMR90 Hi-C 24141950 FITM2 1108 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 43582253 43582415 43582335 Y NA PABPC1L,TOMM34,STK4 NA NA NA NA TOMM34 4712 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 45006307 45006609 45006393 Y PCIF1,ZNF335 SLC35C2 NA NA NA NA SLC35C2 15264 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 45257949 45258319 45258134 Y NA NA NA NA NA NA ELMO2 198245 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 45989347 45989834 45989660 Y SULF2 ZMYND8 ZMYND8,LOC100131496,NCOA3 IMR90 Hi-C 24141950 ZMYND8 5780 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 46438543 46438763 46438619 Y SULF2,SULF2 SULF2 NA NA NA NA SULF2 25183 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 47343676 47344035 47343854 Y NA NA NA NA NA NA ARFGEF2 192392 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 48285223 48285402 48285313 Y SPATA2,SLC9A8 B4GALT5 NA NA NA NA B4GALT5 43013 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 48293445 48293839 48293746 Y NA B4GALT5 NA NA NA NA B4GALT5 34576 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 48496798 48497000 48496896 Y NA SPATA2 NA NA NA NA SPATA2 33080 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 48760872 48761304 48761158 Y B4GALT5,SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB UBE2V1,TMEM189-UBE2V1,TMEM189,RP11-112L6.4,CEBPB NA NA NA NA TMEM189-UBE2V1 6870 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 48924890 48925591 48925260 Y SLC9A8,RNF114,SNAI1,TMEM189,CEBPB,PTPN1 NA NA NA NA NA CEBPB 119514 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 48951795 48951969 48951898 Y NA NA NA NA NA NA CEBPB 146419 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 49407275 49407470 49407371 Y MOCS3 BCAS4 ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3 MCF7,K562 ChIA-PET 22265404 BCAS4 1961 CAGE GSS hg19 FANTOM5 2.28682227151573 chr20 50180369 50180507 50180463 Y NFATC2 NA NA NA NA NA ATP9A 202666 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 50247670 50248383 50248096 Y NA NA NA NA NA NA ATP9A 134790 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 50366772 50367203 50366881 Y ZFP64,ATP9A ATP9A,SALL4 NA NA NA NA ATP9A 15970 CAGE GSS hg19 FANTOM5 5.33591863353669 chr20 50416342 50416699 50416509 Y NA ATP9A,SALL4 NA NA NA NA SALL4 360 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 50416703 50416783 50416765 Y ZFP64,SALL4 ATP9A,SALL4 NA NA NA NA SALL4 276 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 52684102 52684485 52684350 Y PFDN4 NA NA NA NA NA PFDN4 137901 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 55838908 55839396 55838948 Y NA BMP7 NA NA NA NA BMP7 289 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 55965649 55965902 55965759 Y NA RAE1,MTRNR2L3,RBM38 NA NA NA NA RBM38 1186 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 56293544 56293843 56293665 Y NA PMEPA1 NA NA NA NA PMEPA1 8952 CAGE GSS hg19 FANTOM5 3.04909636202097 chr20 56592800 56593208 56592856 Y NA NA ZBP1,PMEPA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB22A 289544 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 56705842 56706001 56705847 Y NA NA ZBP1,PCK1,CTCFL,C20orf85 IMR90 Hi-C 24141950 RAB22A 176751 CAGE GSS hg19 FANTOM5 3.04909636202097 chr20 56983736 56983744 56983737 Y NA VAPB NA NA NA NA VAPB 21558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 57018014 57018479 57018179 Y STX16 NA NA NA NA NA VAPB 55836 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 59619863 59620113 59619933 Y CDH4 NA NA NA NA NA TAF4 1018753 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 60934143 60934390 60934309 Y TAF4,PSMA7,SS18L1,RPS21,NTSR1,CABLES2,C20orf20,C20orf151,ADRM1,LAMA5 LAMA5,RPS21,CABLES2 ADRM1 K562 ChIA-PET 22265404 LAMA5 5978 CAGE GSS hg19 FANTOM5 2.28682227151573 chr20 61001783 61002051 61001918 Y NA RPS21,CABLES2 NA NA NA NA CABLES2 21442 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 61317452 61317806 61317666 Y DPH3P1,OGFR,SLCO4A1 SLCO4A1,RP11-93B14.5,NTSR1 NA NA NA NA NTSR1 20383 CAGE GSS hg19 FANTOM5 2.28682227151573 chr20 61724045 61724282 61724168 Y NA NA NA NA NA NA YTHDF1 121304 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 62494990 62495823 62495679 Y NA ZBTB46,TPD52L2,DNAJC5,RNU1-134P NA NA NA NA TPD52L2 394 CAGE GSS hg19 FANTOM5 3.81137045252621 chr20 62676233 62676312 62676273 Y SLC2A4RG,TCEA2,SOX18 ZNF512B,SOX18,RGS19 NA NA NA NA ZNF512B 1801 CAGE GSS hg19 FANTOM5 0.762274090505242 chr20 62887659 62888425 62887862 Y SAMD10,PCMTD2 PCMTD2 NA NA NA NA PCMTD2 2565 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 11126930 11127071 11126959 Y NA BAGE2 BAGE5 IMR90 Hi-C 24141950 BAGE2 29950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 17745935 17746301 17746052 Y NA NA NA NA NA NA LINC00478 305093 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 17842479 17842645 17842562 Y NA NA NA NA NA NA LINC00478 401637 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 17959400 17959753 17959559 Y NA NA NA NA NA NA LINC00478 518558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 17960667 17961305 17960883 Y NA NA NA NA NA NA LINC00478 519825 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 18886111 18886899 18886569 Y NA CXADR NA NA NA NA CXADR 3411 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 26962945 26963646 26963455 Y NA MRPL39 NA NA NA NA MRPL39 14183 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 28218728 28219247 28219071 Y ADAMTS5,ADAMTS1 NA NA NA NA NA APP 677282 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 28942556 28942990 28942803 Y NA NA ADAMTS1,ADAMTS5,MIR4759 IMR90 Hi-C 24141950 N6AMT1 1312703 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 30374865 30375265 30375125 Y C21orf7,N6AMT1,LTN1,USP16 LTN1,RPL23P2,RWDD2B,USP16 LTN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL23P2 6511 CAGE GSS hg19 FANTOM5 6.09819272404193 chr21 30684361 30684712 30684409 Y NA NA NA NA NA NA BACH1 119969 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 30967382 30967686 30967533 Y GRIK1 NA NA NA NA NA BACH1 402990 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 32862869 32863036 32862944 Y NA NA NA NA NA NA SOD1 166899 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 35395270 35395520 35395430 Y GART,GART,SON MRPS6,SLC5A3 MRPS6,ATP5O,LOC100506334 IMR90 Hi-C 24141950 MRPS6 48004 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 36222572 36222954 36222768 Y NA NA NA NA NA NA SLC5A3 778702 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 36234553 36234896 36234857 Y NA NA NA NA NA NA SLC5A3 790683 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 36356108 36356416 36356285 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA SLC5A3 912238 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 36419290 36419780 36419662 Y RUNX1,RUNX1 NA NA NA NA NA RUNX1 955185 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 36577614 36577815 36577724 Y NA NA RUNX1,SETD4,CLIC6,LOC100506385 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RUNX1 797150 CAGE GSS hg19 FANTOM5 1.52454818101048 chr21 37712607 37712952 37712729 Y NA MORC3,CHAF1B NA NA NA NA MORC3 22120 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 38346647 38347014 38346835 Y NA AP000704.5,HLCS NA NA NA NA AP000704.5 9835 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 39430494 39430871 39430698 Y DSCR4 NA NA NA NA NA DSCR4 60583 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 40159439 40159794 40159507 Y NA ETS2 ETS2,LINC00114 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ETS2 15437 CAGE GSS hg19 FANTOM5 1.52454818101048 chr21 40209875 40210169 40209958 Y ETS2 ETS2 NA NA NA NA ETS2 34644 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 40211972 40212276 40212079 Y ETS2 ETS2 NA NA NA NA ETS2 36741 CAGE GSS hg19 FANTOM5 1.52454818101048 chr21 40277371 40277733 40277541 Y NA NA ETS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ETS2 102140 CAGE GSS hg19 FANTOM5 1.52454818101048 chr21 40278958 40279421 40279192 Y NA NA ETS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ETS2 103727 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 40317605 40318001 40317816 Y NA NA ETS2,LINC00114,ERG IMR90 Hi-C 24141950 ETS2 142374 CAGE GSS hg19 FANTOM5 8.38501499555766 chr21 40361689 40362112 40361935 Y NA NA ETS2,WRB,LINC00114 IMR90,HELA Hi-C,5C 24141950,22955621 ETS2 186458 CAGE GSS hg19 FANTOM5 2.28682227151573 chr21 40376938 40377126 40376993 Y NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 176651 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 40386657 40387043 40386856 Y NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 166734 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 40388041 40388127 40388084 Y ETS2 NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 165650 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 40389005 40389356 40389205 Y NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 164421 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 44395482 44395891 44395810 Y NA PKNOX1 NA NA NA NA PKNOX1 2862 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 44395922 44396228 44396080 Y WDR4,U2AF1,CBS PKNOX1 NA NA NA NA PKNOX1 3302 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 44816664 44817004 44816885 Y NA SIK1 NA NA NA NA SIK1 28004 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 45663780 45664167 45664129 Y TRAPPC10,PWP2,C21orf2,ICOSLG ICOSLG NA NA NA NA ICOSLG 4931 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 45943778 45945170 45944363 Y NA C21orf90 NA NA NA NA C21orf90 8679 CAGE GSS hg19 FANTOM5 1.52454818101048 chr21 47038276 47038513 47038446 Y NA NA PCBP3,ADARB1,LOC100129027,LOC642852,LINC00315,POFUT2,SLC19A1 IMR90 Hi-C 24141950 SLC19A1 75951 CAGE GSS hg19 FANTOM5 0.762274090505242 chr21 47554885 47555152 47555043 Y FTCD COL6A2 NA NA NA NA COL6A2 38874 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 17091097 17091180 17091141 Y IL17RA FABP5P11,TPTEP1 NA NA NA NA TPTEP1 10320 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 18916909 18917370 18917163 Y MICAL3,TUBA8,DGCR6,PRODH,PRODH DGCR6,PRODH,DGCR5 NA NA NA NA PRODH 4696 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 19159081 19159242 19159165 Y NA DGCR14,SLC25A1 NA NA NA NA SLC25A1 5101 CAGE GSS hg19 FANTOM5 3.04909636202097 chr22 19410653 19410889 19410838 Y HIRA MRPL40,HIRA,C22orf39 NA NA NA NA MRPL40 6536 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 19564748 19565059 19564792 Y CLDN5 NA HIRA,CLDN5,LOC150185,CLTCL1,UFD1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC45 99766 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 20199029 20199266 20199148 Y NA NA NA NA NA NA ZDHHC8 84050 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 20226620 20226831 20226686 Y NA NA NA NA NA NA DGCR6L 78772 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 22010846 22011267 22010978 Y YPEL1 YDJC,SDF2L1,PPIL2 NA NA NA NA PPIL2 6287 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 22011632 22012115 22011859 Y NA YDJC,SDF2L1,PPIL2 NA NA NA NA PPIL2 7073 CAGE GSS hg19 FANTOM5 6.09819272404193 chr22 22186398 22186549 22186531 Y NA MAPK1 NA NA NA NA MAPK1 33421 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 22334723 22335115 22334952 Y NA PPM1F,TOP3B NA NA NA NA TOP3B 98 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 24255997 24256450 24256302 Y C22orf43,CABIN1,CABIN1 MIF NA NA NA NA MIF 21806 CAGE GSS hg19 FANTOM5 1.52454818101048 chr22 25844657 25845002 25844694 Y NA LRP5L,CRYBB2P1 NA NA NA NA CRYBB2P1 2585 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 28304832 28305219 28305193 Y NA TTC28-AS1,PITPNB NA NA NA NA TTC28-AS1 8145 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 28549378 28549438 28549411 Y NA NA NA NA NA NA PITPNB 235256 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 29467563 29467858 29467701 Y NA KREMEN1 NA NA NA NA KREMEN1 497 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 30601535 30602099 30601994 Y MTMR3,SLC35E4,SF3A1,DUSP18,CCDC157,OSM,LIF LIF HORMAD2,LIF,GATSL3 IMR90 Hi-C 24141950 LIF 38741 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 30649196 30649657 30649496 Y MTMR3,TBC1D10A,SF3A1,DUSP18,LIF,OSM LIF NA NA NA NA LIF 8356 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 36172767 36172943 36172931 Y MB,MB,RBFOX2,RBFOX2 NA APOL5 IMR90 Hi-C 24141950 RBFOX2 249530 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 36299462 36299943 36299718 Y NA NA NA NA NA NA RBFOX2 122530 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 36727482 36728450 36727733 Y APOL3 NA NA NA NA NA MYH9 53613 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 36766615 36766810 36766723 Y NCF4,MYH9 MYH9 NA NA NA NA MYH9 15253 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 36806147 36806450 36806256 Y NA MYH9 MYH9,FOXRED2,TXN2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MYH9 24084 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 36855477 36855678 36855599 Y NA TXN2,FOXRED2 NA NA NA NA TXN2 20399 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 39572231 39572423 39572299 Y TOMM22,PDGFB CBX7 PDGFB,SNORD83A,RNU86,SNORD83B,RPL3 MCF7,K562 ChIA-PET 22265404 CBX7 25552 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 39608827 39609203 39608881 Y NA PDGFB NA NA NA NA PDGFB 29553 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 39637977 39638270 39638005 Y MGAT3,MGAT3,SUN2,SUN2,NPTXR,CBX7,SYNGR1,PDGFB PDGFB NA NA NA NA PDGFB 486 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 39649567 39649736 39649595 Y SUN2,APOBEC3A,PDGFB PDGFB CBX7,RNU86,RPL3,SNORD83A,PDGFB IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PDGFB 10811 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 41047729 41047883 41047796 Y NA MKL1 ST13,MKL1,MCHR1,ADSL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 17023 CAGE GSS hg19 FANTOM5 1.52454818101048 chr22 41418482 41418837 41418726 Y MKL1,EP300 RP11-12M9.3 ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-12M9.3 39219 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 41809427 41810696 41809981 Y CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF TEF,TOB2 NA NA NA NA TOB2 30331 CAGE GSS hg19 FANTOM5 5.33591863353669 chr22 42062739 42062953 42062873 Y NA XRCC6,C22orf46,NHP2L1 NA NA NA NA C22orf46 19990 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 42718410 42718572 42718489 Y NA Z83851.1 TCF20,NFAM1 IMR90 Hi-C 24141950 Z83851.1 44670 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 43165805 43166293 43166166 Y NFAM1,ARFGAP3 NA ARFGAP3,PACSIN2,CYB5R3 IMR90 Hi-C 24141950 A4GALT 50501 CAGE GSS hg19 FANTOM5 3.04909636202097 chr22 45012617 45012993 45012776 Y NA PRR5 NA NA NA NA PRR5 49600 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 45106642 45106985 45106689 Y NA PRR5,PRR5-ARHGAP8,ARHGAP8 NA NA NA NA ARHGAP8 10287 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 45402294 45403188 45402906 Y NA PHF21B NA NA NA NA PHF21B 692 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 46374858 46375446 46375153 Y NA WNT7B NA NA NA NA WNT7B 3849 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 46474643 46475112 46474791 Y C22orf26 RP6-109B7.3,MIR4763 NA NA NA NA RP6-109B7.3 27058 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 46924162 46924396 46924177 Y NA CELSR1,GRAMD4 NA NA NA NA CELSR1 6671 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 47092422 47092659 47092464 Y NA CERK NA NA NA NA CERK 39499 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 47134957 47135355 47135288 Y NA CERK,TBC1D22A NA NA NA NA CERK 2799 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 47173530 47173804 47173706 Y CERK,TBC1D22A CERK,TBC1D22A NA NA NA NA TBC1D22A 17012 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 49548057 49548240 49548148 Y NA NA NA NA NA NA C22orf34 500950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 49768624 49768992 49768711 Y NA NA NA NA NA NA C22orf34 280198 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 49860945 49861166 49860973 Y NA NA NA NA NA NA C22orf34 188024 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 50710173 50710402 50710310 Y MLC1,MOV10L1,MOV10L1,MOV10L1,SHANK3,SBF1,PPP6R2,MAPK8IP2,MAPK8IP2,FAM116B,ACR,MAPK11 TUBGCP6,HDAC10,MAPK12,MAPK11,PLXNB2 NA NA NA NA MAPK11 2977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr22 50784754 50785397 50785059 Y PPP6R2 PLXNB2,PPP6R2 NA NA NA NA PPP6R2 5021 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 350243 350428 350336 Y NA NA NA NA NA NA CHL1 113964 CAGE GSS hg19 FANTOM5 1.52454818101048 chr3 4909917 4910799 4910503 Y ITPR1,EDEM1,BHLHE40,ARL8B NA NA NA NA NA BHLHE40 108002 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 5028534 5029013 5028702 Y ITPR1,EDEM1,ARL8B,BHLHE40 BHLHE40 NA NA NA NA BHLHE40 9733 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 9422978 9423353 9423146 Y SETD5,RAD18,THUMPD3 THUMPD3,SRGAP3,RP11-380O24.1,SETD5,SETD5-AS1 NA NA NA NA SETD5 13946 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 11332891 11333370 11333202 Y HRH1,ATG7 ATG7 NA NA NA NA ATG7 20896 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 12163583 12163954 12163774 Y SYN2 NA NA NA NA NA SYN2 119707 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 13035460 13035932 13035883 Y CAND2,IQSEC1,HDAC11,HDAC11,IQSEC1 NA NA NA NA NA IQSEC1 76685 CAGE GSS hg19 FANTOM5 2.28682227151573 chr3 13452835 13453081 13452953 Y IQSEC1,HDAC11,HDAC11 NUP210 NA NA NA NA NUP210 6728 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 16373323 16373612 16373405 Y ANKRD28,OXNAD1 NA NA NA NA NA OXNAD1 68617 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 18571233 18571621 18571333 Y NA NA NA NA NA NA SATB1 86153 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 19188369 19188866 19188531 Y NA NA NA NA NA NA SATB1 703289 CAGE GSS hg19 FANTOM5 1.52454818101048 chr3 19687209 19687217 19687213 Y NA NA NA NA NA NA EFHB 299300 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 23709947 23710120 23710034 Y UBE2E1 NA UBE2E2,UBE2E1,NKIRAS1,RPL15 IMR90 Hi-C 24141950 UBE2E1 135274 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 25790563 25790933 25790768 Y NA OXSM,NGLY1 NA NA NA NA OXSM 31475 CAGE GSS hg19 FANTOM5 2.28682227151573 chr3 32426467 32426762 32426639 Y NA CMTM7 CMTM7 IMR90 Hi-C 24141950 CMTM7 4401 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 32857811 32858132 32857909 Y NA AC139452.2 NA NA NA NA AC139452.2 32673 CAGE GSS hg19 FANTOM5 4.57364454303145 chr3 32929924 32929958 32929941 Y NA NA NA NA NA NA AC139452.2 104786 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 33590851 33591213 33591209 Y NA NA NA NA NA NA UBP1 109988 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 36937540 36937792 36937666 Y NA NA NA NA NA NA EPM2AIP1 95003 CAGE GSS hg19 FANTOM5 4.57364454303145 chr3 37131567 37131685 37131626 Y NA NA NA NA NA NA RPL29P11 75062 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 37901883 37902306 37902042 Y CTDSPL AC093415.2,CTDSPL NA NA NA NA CTDSPL 432 CAGE GSS hg19 FANTOM5 1.52454818101048 chr3 42220925 42221235 42221114 Y TRAK1 NA NA NA NA NA TRAK1 167631 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 42549446 42549661 42549578 Y NA RP11-219I21.1 NA NA NA NA RP11-219I21.1 40314 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 42922564 42922793 42922612 Y C3orf39 NA NA NA NA NA HIGD1A 78541 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 44654573 44654874 44654724 Y ZNF445,ZNF501,ZNF167,ZNF660,ZNF197 ZNF197,ZNF35 NA NA NA NA ZNF197 30193 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 46600040 46600219 46600077 Y NA NA NA NA NA NA NBEAL2 418954 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 53204252 53204625 53204434 Y PBRM1,TMEM110,DCP1A,PRKCD RFT1,PRKCD NA NA NA NA PRKCD 16227 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 53270281 53270430 53270371 Y PRKCD,DCP1A,TKT TKT NA NA NA NA TKT 17638 CAGE GSS hg19 FANTOM5 2.28682227151573 chr3 53360286 53360418 53360351 Y NA DCP1A NA NA NA NA DCP1A 19236 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 53859957 53860202 53860080 Y CACNA1D,CHDH CHDH,IL17RB NA NA NA NA CHDH 18215 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 57096152 57096374 57096203 Y ASB14 SPATA12,ARHGEF3 NA NA NA NA SPATA12 3683 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 60994842 60995056 60994945 Y NA NA NA NA NA NA FHIT 240077 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 61414830 61414900 61414885 Y NA NA PTPRG IMR90 Hi-C 24141950 PTPRG 130343 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 73159773 73160145 73159855 Y EBLN2 NA PDZRN3,CACNA1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 115837 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 75472638 75472968 75472803 Y NA NA NA NA NA NA RP11-413E6.1 199336 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 76577806 76578430 76578088 Y NA NA NA NA NA NA ROBO2 623960 CAGE GSS hg19 FANTOM5 3.04909636202097 chr3 76605335 76605709 76605470 Y ROBO2 NA NA NA NA NA ROBO2 651489 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 78881449 78881566 78881507 Y NA NA NA NA NA NA ROBO1 933399 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 80100853 80101105 80100983 Y NA NA NA NA NA NA ROBO1 285888 CAGE GSS hg19 FANTOM5 3.04909636202097 chr3 83268139 83268257 83268189 Y NA NA NA NA NA NA GBE1 1458827 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 96336052 96336669 96336607 Y NA NA NA NA NA NA HNRNPKP4 269654 CAGE GSS hg19 FANTOM5 3.81137045252621 chr3 98528830 98529143 98529110 Y NA NA NA NA NA NA CPOX 218263 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 100482455 100482783 100482461 Y NA NA NA NA NA NA TFG 56250 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 100516379 100516430 100516403 Y ABI3BP NA NA NA NA NA TFG 90174 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 112258715 112258936 112258847 Y SLC35A5,ATG3 SLC35A5,ATG3 NA NA NA NA SLC35A5 19620 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 113078924 113079182 113079053 Y NA NA NA NA NA NA SPICE1 152852 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 113270876 113271161 113270996 Y NA SPICE1 NA NA NA NA SPICE1 38842 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 113701770 113701838 113701802 Y KIAA1407,DRD3,ZDHHC23 QTRTD1 NA NA NA NA QTRTD1 20842 CAGE GSS hg19 FANTOM5 1.52454818101048 chr3 114724447 114724794 114724621 Y NA NA NA NA NA NA ZBTB20-AS1 655789 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 115502758 115503253 115502970 Y NA NA NA NA NA NA PTMAP8 1240292 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 115511576 115511993 115511793 Y NA NA NA NA NA NA PTMAP8 1231552 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 115545713 115545826 115545800 Y NA NA NA NA NA NA PTMAP8 1197719 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 115548074 115548457 115548266 Y NA NA NA NA NA NA PTMAP8 1195088 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 116444477 116444635 116444556 Y NA NA NA NA NA NA PTMAP8 298910 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 119436291 119436418 119436355 Y C3orf15,NR1I2 COX17 NA NA NA NA COX17 41990 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 120493479 120494008 120493729 Y NA GTF2E1,RABL3 NA NA NA NA RABL3 33639 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 121800469 121800680 121800559 Y EAF2,CD86 NA NA NA NA NA CSTA 241411 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 122151664 122151964 122151814 Y NA WDR5B NA NA NA NA WDR5B 18782 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 123263878 123263964 123263921 Y ADCY5,ADCY5 PTPLB,MYLK-AS1 NA NA NA NA PTPLB 38068 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 123351425 123351671 123351446 Y ADCY5 PTPLB,MYLK-AS1 NA NA NA NA MYLK-AS1 49036 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 123476863 123477567 123477241 Y MYLK NA NA NA NA NA MYLK-AS1 174474 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 125709142 125709481 125709414 Y ZXDC,CCDC37 NA NA NA NA NA RP11-124N2.1 91582 CAGE GSS hg19 FANTOM5 1.52454818101048 chr3 126680194 126680270 126680232 Y NA NA NA NA NA NA CHCHD6 259131 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 126701397 126702091 126701497 Y PLXNA1 NA CHCHD6,PLXNA1 MCF7,K562 ChIA-PET 22265404 CHCHD6 280334 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 128216520 128216923 128216625 Y EEFSEC,DNAJB8,GATA2,GATA2,GATA2 RP11-475N22.4 GATA2,C3orf27,RUVBL1,EEFSEC,DNAJB8,DNAJB8-AS1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 RP11-475N22.4 10465 CAGE GSS hg19 FANTOM5 1.52454818101048 chr3 128745839 128746109 128746044 Y NA NA NA NA NA NA RAB43 93535 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 129245456 129245718 129245564 Y RHO NA NA NA NA NA PLXND1 77943 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 136631651 136631818 136631718 Y NA NA NA NA NA NA NCK1 52601 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 138582294 138582582 138582441 Y MRPS22 PIK3CB PIK3CB IMR90 Hi-C 24141950 PIK3CB 30514 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 141126018 141126305 141126087 Y NA NA NA NA NA NA RASA2 77584 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 141610914 141611173 141610928 Y NA ATP1B3 NA NA NA NA ATP1B3 17948 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 148781933 148782210 148782183 Y NA HLTF NA NA NA NA HLTF 20131 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 149151278 149151442 149151363 Y NA NA GYG1,TM4SF18,TM4SF1,WWTR1,WWTR1-AS1 IMR90 Hi-C 24141950 TM4SF1 57626 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 149668313 149668642 149668480 Y NA NA NA NA NA NA PFN2 97933 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 150089534 150090066 150089791 Y NA TSC22D2 TSC22D2,LOC646903,RNF13,PFN2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 34056 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 156530301 156530778 156530576 Y TIPARP,TIPARP,TIPARP,CCNL1,LEKR1,LEKR1 PA2G4P4,LINC00886,LEKR1 NA NA NA NA LINC00886 2073 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 161731102 161731436 161731432 Y NA NA NA NA NA NA B3GALNT1 909930 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 171816708 171816982 171816800 Y NA NA NA NA NA NA FNDC3B 61290 CAGE GSS hg19 FANTOM5 2.28682227151573 chr3 176774167 176774584 176774367 Y NA NA NA NA NA NA TBL1XR1 138677 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 186745346 186745889 186745388 Y TBCCD1,EIF4A2,RTP4,ST6GAL1 NA NA NA NA NA ST6GAL1 99072 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 188661502 188661787 188661650 Y NA NA LPP,LPP-AS2,BCL6,LOC100131635 IMR90 Hi-C 24141950 LPP 792430 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 193876735 193877026 193876899 Y NA HES1 NA NA NA NA HES1 24801 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 195542423 195542578 195542499 Y MUC20,MUC4 NA NA NA NA NA SDHAP2 159456 CAGE GSS hg19 FANTOM5 0.762274090505242 chr3 196855650 196855726 196855688 Y NA NA NA NA NA NA MFI2 100963 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 991255 991645 991565 Y ZNF721,PDE6B,CPLX1,TMEM175 DGKQ,IDUA,FGFRL1 NA NA NA NA FGFRL1 10079 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 1035263 1035607 1035280 Y FGFRL1,FGFRL1 FGFRL1 NA NA NA NA FGFRL1 33539 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 1562061 1562319 1562152 Y NA RP11-1398P2.1 NA NA NA NA RP11-1398P2.1 17661 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 1843900 1844033 1843967 Y NA LETM1,WHSC1 NA NA NA NA LETM1 11941 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 2537711 2538436 2538089 Y NA NA NA NA NA NA RNF4 75764 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 3488499 3488826 3488767 Y NA DOK7,LRPAP1 NA NA NA NA DOK7 25466 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 3829290 3829379 3829335 Y LYAR,LYAR,ADRA2C NA LOC100133461 IMR90 Hi-C 24141950 ADRA2C 63215 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 3836768 3837443 3837153 Y NA NA LOC100133461 IMR90 Hi-C 24141950 ADRA2C 70693 CAGE GSS hg19 FANTOM5 6.86046681454718 chr4 3872963 3873310 3873200 Y NA NA LOC100133461,FAM86EP,FLJ35424,ADRA2C IMR90 Hi-C 24141950 FAM86EP 81836 CAGE GSS hg19 FANTOM5 5.33591863353669 chr4 6185514 6185738 6185614 Y NA NA NA NA NA NA WFS1 83838 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 6565985 6566385 6566254 Y JAKMIP1,TBC1D14,PPP2R2C,PPP2R2C PPP2R2C,MAN2B2 NA NA NA NA PPP2R2C 2658 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 8411022 8411421 8411226 Y NA ACOX3 NA NA NA NA ACOX3 29029 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 9154755 9155069 9154900 Y NA FAM86KP NA NA NA NA FAM86KP 1733 CAGE GSS hg19 FANTOM5 1.52454818101048 chr4 12642016 12642195 12642111 Y NA NA NA NA NA NA HSP90AB2P 690843 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 13981901 13982273 13982087 Y NA NA LOC441009,CPEB2,BOD1L IMR90 Hi-C 24141950 RAB28 497912 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 37668347 37668621 37668474 Y NA RELL1 NA NA NA NA RELL1 17377 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 39659267 39659273 39659270 Y NA UBE2K LIAS,LOC401127,PDS5A,UBE2K IMR90 Hi-C 24141950 UBE2K 38391 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 39933245 39933555 39933419 Y NA PDS5A NA NA NA NA PDS5A 44021 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 41100025 41100220 41100123 Y NA NA NA NA NA NA APBB2 116511 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 41148833 41148910 41148907 Y LIMCH1,LIMCH1 NA NA NA NA NA APBB2 67821 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 41197133 41197282 41197239 Y NA APBB2 NA NA NA NA APBB2 19449 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 75859868 75860329 75860092 Y BTC,PARM1 PARM1 NA NA NA NA PARM1 3563 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 78708574 78708903 78708795 Y CNOT6L NA NA NA NA NA MRPL1 72771 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 88074850 88075090 88074969 Y DSPP NA NA NA NA NA KLHL8 84376 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 88408034 88408084 88408060 Y SPARCL1 NA NA NA NA NA NUDT9 66300 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 90212945 90213002 90212979 Y GPRIN3 NA NA NA NA NA NAP1L5 595559 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 92218724 92218762 92218742 Y NA NA NA NA NA NA NAP1L5 2601338 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 95406092 95406259 95406175 Y NA PDLIM5 NA NA NA NA PDLIM5 35055 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 96332977 96333151 96333005 Y UNC5C NA NA NA NA NA BMPR1B 655858 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 96345355 96345692 96345542 Y UNC5C NA NA NA NA NA BMPR1B 668236 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 99853675 99854028 99853903 Y EIF4E,EIF4E EIF4E NA NA NA NA EIF4E 3887 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 102266716 102267419 102267189 Y NA PPP3CA NA NA NA NA PPP3CA 16 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 103678847 103679008 103678977 Y NA MANBA NA NA NA NA MANBA 1143 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 104888285 104888590 104888438 Y NA NA NA NA NA NA CENPE 770719 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 106390941 106391445 106391094 Y TET2,TET2 PPA2 NA NA NA NA PPA2 1793 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 106628155 106628490 106628322 Y NA GSTCD NA NA NA NA GSTCD 220 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 110623287 110623426 110623357 Y LRIT3 CASP6,PLA2G12A NA NA NA NA CASP6 548 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 113894342 113894685 113894441 Y NEUROG2,ANK2,ANK2 NA NA NA NA NA ANK2 157077 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 117519495 117520605 117520296 Y NA NA NA NA NA NA SNHG8 1677259 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 119629667 119629850 119629760 Y NA METTL14 NA NA NA NA METTL14 25144 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 120458820 120459280 120459019 Y PDE5A,PDE5A,PDE5A NA NA NA NA NA RP11-33B1.1 84874 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 124399993 124400470 124400171 Y NA NA NA NA NA NA SPRY1 84043 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 128990801 128990842 128990822 Y NA LARP1B NA NA NA NA LARP1B 10378 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 133266182 133266225 133266204 Y NA NA NA NA NA NA SCLT1 3253418 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 140074901 140075184 140075104 Y NA ELF2 CCRN4L,ELF2,NAA15,NDUFC1 IMR90 Hi-C 24141950 ELF2 21188 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 148729482 148729491 148729487 Y NA NA NA NA NA NA ARHGAP10 78268 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 152143714 152143771 152143743 Y SH3D19 NA NA NA NA NA RPS3A 124989 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 153858553 153859077 153858605 Y TRIM2,FHDC1 FHDC1 ARFIP1,FHDC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FHDC1 3049 CAGE GSS hg19 FANTOM5 4.57364454303145 chr4 169430922 169431412 169431075 Y DDX60,DDX60L PALLD NA NA NA NA PALLD 14705 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 174185845 174186217 174186078 Y NA NA NA NA NA NA HMGB2 68059 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 184319940 184320161 184319981 Y NA CDKN2AIP WWC2,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 43583 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 185209648 185210113 185209861 Y IRF2,CASP3 NA IRF2,CCDC111,LOC728175,CASP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IRF2 183621 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 187050395 187050604 187050500 Y SORBS2 FAM149A SORBS2 IMR90 Hi-C 24141950 FAM149A 26822 CAGE GSS hg19 FANTOM5 0.762274090505242 chr4 187614690 187615080 187614853 Y NA FAT1 NA NA NA NA FAT1 30796 CAGE GSS hg19 FANTOM5 3.04909636202097 chr4 188504416 188504571 188504495 Y NA NA FAT1,LOC339975 IMR90 Hi-C 24141950 RP11-219G10.1 764607 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 53990 54174 54063 Y PLEKHG4B,C5orf55 CTD-2231H16.1 LRRC14B,CCDC127,PLEKHG4B,SDHA IMR90 Hi-C 24141950 CTD-2231H16.1 36092 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 426647 427011 426980 Y NA EXOC3,CTD-2228K2.5 NA NA NA NA EXOC3 14262 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 523686 523917 523764 Y SLC9A3 SLC9A3 NA NA NA NA SLC9A3 1239 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 601191 601577 601476 Y PLEKHG4B,SLC9A3,CEP72 CEP72 SLC9A3,CEP72 IMR90 Hi-C 24141950 CEP72 8810 CAGE GSS hg19 FANTOM5 3.81137045252621 chr5 784651 785023 784908 Y ZDHHC11,TPPP NA NA NA NA NA TPPP 93141 CAGE GSS hg19 FANTOM5 3.81137045252621 chr5 1041596 1043550 1041859 Y NA RP11-43F13.3,NKD2 NA NA NA NA NKD2 34652 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 1111223 1111556 1111501 Y LPCAT1,SLC12A7 SLC12A7 NA NA NA NA SLC12A7 1073 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 1155287 1155504 1155358 Y NA SLC12A7 SLC12A7,TRIP13,SLC6A18,BRD9 IMR90 Hi-C 24141950 SLC12A7 45137 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 1316464 1316882 1316563 Y TERT,SLC6A3 TERT,CLPTM1L TERT IMR90 Hi-C 24141950 TERT 23280 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 2669640 2670190 2669944 Y NA NA NA NA NA NA C5orf38 80055 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 3595085 3595457 3595281 Y NA NA NA NA NA NA IRX2 844116 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 6712873 6713977 6713364 Y NA NA NA NA NA NA RP11-332J15.3 50027 CAGE GSS hg19 FANTOM5 17.5323040816206 chr5 14208272 14208510 14208423 Y FAM105B NA NA NA NA NA TRIO 66461 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 14264855 14265210 14264930 Y TRIO NA NA NA NA NA TRIO 123044 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 16715199 16715528 16715435 Y NA NA NA NA NA NA FAM134B 100032 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 18391290 18391435 18391363 Y NA NA NA NA NA NA RPL36AP21 343631 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 19735118 19735431 19735276 Y NA NA NA NA NA NA RP11-124N3.3 594663 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 31894536 31894834 31894609 Y NA CTD-2206G10.2 NA NA NA NA CTD-2206G10.2 26639 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 32592950 32593432 32593186 Y NA NA NA NA NA NA SUB1 63211 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 34048471 34048803 34048799 Y NA AMACR NA NA NA NA AMACR 42251 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 36174356 36174616 36174412 Y SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2 LMBRD2,SKP2 NA NA NA NA SKP2 24265 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 37209037 37209204 37209072 Y C5orf42 C5orf42 NA NA NA NA C5orf42 38326 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 39185861 39186166 39186014 Y NA NA NA NA NA NA RICTOR 113351 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 41845041 41845055 41845050 Y OXCT1,FBXO4 OXCT1 NA NA NA NA OXCT1 23566 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 43099724 43100011 43099805 Y NA ZNF131 ZNF131,LOC648987 IMR90 Hi-C 24141950 ZNF131 36446 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 44216109 44216133 44216121 Y NA NA NA NA NA NA RP11-53O19.1 590746 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 53466021 53466779 53466401 Y NA NA NA NA NA NA ARL15 137633 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 54120977 54121197 54121092 Y NA NA SNX18 IMR90 Hi-C 24141950 SNX18 309388 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 55289605 55289989 55289924 Y IL6ST IL6ST,CTD-2031P19.3 NA NA NA NA CTD-2031P19.3 610 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 58874550 58874813 58874554 Y NA NA NA NA NA NA DEPDC1B 1119204 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 60629089 60629454 60629159 Y NA ZSWIM6 NA NA NA NA ZSWIM6 2989 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 64309059 64309061 64309060 Y NA NA NA NA NA NA CWC27 246302 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 71763835 71764098 71763993 Y NA NA NA NA NA NA MRPS27 149362 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 72233721 72233796 72233759 Y NA FCHO2 NA NA NA NA FCHO2 16012 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 76977025 76977227 76977132 Y OTP NA NA NA NA NA WDR41 62589 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 77026226 77026494 77026313 Y NA NA NA NA NA NA ACTBP2 52211 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 77374282 77374304 77374295 Y NA NA NA NA NA NA TBCA 211678 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 77802337 77802767 77802745 Y AP3B1,LHFPL2,ARSB NA NA NA NA NA SCAMP1 147998 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 77809306 77809707 77809506 Y AP3B1,ARSB NA NA NA NA NA SCAMP1 154967 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 79458255 79458620 79458438 Y MSH3,SERINC5 NA NA NA NA NA SERINC5 91278 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 79480253 79480678 79480326 Y NA NA NA NA NA NA SERINC5 69220 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 79553045 79553765 79553579 Y NA SERINC5 NA NA NA NA SERINC5 3147 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 81074673 81075064 81074862 Y NA NA SSBP2,ZCCHC9,ATG10 IMR90 Hi-C 24141950 ATG10 190780 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 81934356 81934439 81934367 Y NA NA VCAN IMR90 Hi-C 24141950 RPS23 361960 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 85789046 85789185 85789116 Y NA NA NA NA NA NA COX7C 122536 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 86667091 86667409 86667357 Y NA CCNH NA NA NA NA CCNH 39427 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 89259292 89259660 89259475 Y NA NA NA NA NA NA CETN3 443943 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 93316390 93316647 93316523 Y NA NA NA NA NA NA FAM172A 128757 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 98253335 98253735 98253703 Y CHD1 CTD-2007H13.3 NA NA NA NA CTD-2007H13.3 9140 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 99382569 99383254 99382906 Y NA NA NA NA NA NA CTD-2001C12.1 485712 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 99387251 99388845 99388529 Y NA NA NA NA NA NA CTD-2001C12.1 480121 CAGE GSS hg19 FANTOM5 3.04909636202097 chr5 102304978 102305194 102305031 Y NA NA NA NA NA NA PPIP5K2 148659 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 103559627 103559775 103559695 Y NA NA NA NA NA NA NUDT12 663133 CAGE GSS hg19 FANTOM5 12.9586595385891 chr5 109257413 109257833 109257636 Y MAN2A1 NA TMEM232 IMR90 Hi-C 24141950 MAN2A1 234346 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 111054290 111054596 111054444 Y C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13 NA NA NA NA NA STARD4 208002 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 114970299 114970641 114970577 Y NA TMED7-TICAM2,TMED7 NA NA NA NA TMED7 3610 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 122885327 122885717 122885442 Y CEP120,CSNK1G3 CSNK1G3 NA NA NA NA CSNK1G3 39534 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 123738017 123738276 123738143 Y NA NA NA NA NA NA ZNF608 344224 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 123739028 123739231 123739141 Y NA NA NA NA NA NA ZNF608 343269 CAGE GSS hg19 FANTOM5 28.9664154391992 chr5 131629178 131629624 131629352 Y FNIP1,IRF1,SLC22A4 P4HA2 NA NA NA NA P4HA2 170 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 134259128 134259903 134259220 Y NA PCBD2,CTB-36O1.7,MTND6P4,MTND4P12 NA NA NA NA MTND6P4 1315 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 138851930 138852095 138852011 Y NA ECSCR NA NA NA NA ECSCR 11602 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 139031397 139032095 139031636 Y C5orf53,PSD2,NRG2,CXXC5 CXXC5 NA NA NA NA CXXC5 6513 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 139088295 139089196 139088669 Y NA NA CXXC5 K562 ChIA-PET 22265404 CXXC5 63411 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 139113196 139113643 139113518 Y C5orf53,PSD2 NA DNAJC18,UBE2D2,CXXC5 IMR90 Hi-C 24141950 CXXC5 88312 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 139638984 139639383 139639269 Y C5orf32,ZMAT2,SRA1,IK,HARS2,APBB3,ANKHD1 PFDN1 NA NA NA NA PFDN1 41323 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 139724210 139724515 139724457 Y SRA1,CD14,CD14,APBB3,HBEGF,ANKHD1 PFDN1 NA NA NA NA HBEGF 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 140090601 140091006 140090806 Y NA WDR55,HARS2,HARS,ZMAT2 NA NA NA NA ZMAT2 14336 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 141404371 141404781 141404694 Y DIAPH1,FCHSD1 GNPDA1 GNPDA1,NDFIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GNPDA1 13765 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 142315332 142315934 142315386 Y NR3C1,NR3C1,ARHGAP26 NA NA NA NA NA ARHGAP26 167383 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 148836415 148836621 148836572 Y NA NA NA NA NA NA CSNK1A1 92386 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 149110531 149110757 149110649 Y PPARGC1B PPARGC1B NA NA NA NA PPARGC1B 2670 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 149111581 149111664 149111645 Y NA PPARGC1B NA NA NA NA PPARGC1B 3720 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 149789263 149789759 149789627 Y RBM22,DCTN4,DCTN4,CD74,CD74 RPS14 NA NA NA NA RPS14 37560 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 151119916 151120243 151119990 Y NA RP11-54C4.1,G3BP1,ATOX1 SPARC IMR90 Hi-C 24141950 RP11-54C4.1 23696 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 154062607 154063000 154062805 Y GEMIN5 LARP1 LARP1,C5orf4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LARP1 27462 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 157257409 157257732 157257678 Y NA CLINT1 NA NA NA NA CLINT1 26451 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 157938513 157938762 157938602 Y NA NA NA NA NA NA CLINT1 654330 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 158611896 158612266 158612182 Y IL12B,RNF145,RNF145,RNF145,RNF145,RNF145 RNF145 NA NA NA NA RNF145 22795 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 167752204 167752623 167752553 Y PANK3 WWC1 RARS IMR90 Hi-C 24141950 WWC1 35548 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 168232470 168232861 168232812 Y NA NA NA NA NA NA CTC-575D19.1 191153 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 168472035 168472299 168472205 Y NA CTB-174D11.1 NA NA NA NA CTB-174D11.1 33803 CAGE GSS hg19 FANTOM5 3.81137045252621 chr5 168843913 168844245 168844079 Y NA NA SLIT3 IMR90 Hi-C 24141950 SLIT3 117780 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 171431879 171432256 171432181 Y UBTD2,STK10 FBXW11 NA NA NA NA FBXW11 2 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 171709316 171709633 171709569 Y NA UBTD2 NA NA NA NA UBTD2 241 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 172234136 172234644 172234380 Y NA DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ERGIC1 24634 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 172922247 172922290 172922269 Y NA NA STC2,LOC285593,BNIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BOD1 119373 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 173282717 173283022 173282777 Y NA CPEB4 BOD1,C5orf47 IMR90 Hi-C 24141950 CPEB4 30261 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 173846140 173846257 173846227 Y NA NA MSX2,MIR4634 IMR90 Hi-C 24141950 MSX2 303279 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 174906234 174906555 174906308 Y NA SFXN1 NA NA NA NA SFXN1 4169 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 177645477 177646261 177645593 Y NA HNRNPAB NA NA NA NA HNRNPAB 15969 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 178323440 178323622 178323554 Y NA ZNF354B,RNU1-39P,ZFP2 NA NA NA NA ZFP2 2545 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 179718006 179718384 179718320 Y NA MAPK9 NA NA NA NA MAPK9 907 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 180050392 180050585 180050489 Y NA NA NA NA NA NA CNOT6 130980 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 180541875 180541994 180541989 Y OR2Y1 NA BTNL8,MGAT1 IMR90 Hi-C 24141950 CTC-338M12.5 74930 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 180611137 180611357 180611292 Y MGAT1 CTC-338M12.5,TRIM7,TRIM41,MIR4638 NA NA NA NA CTC-338M12.5 5567 CAGE GSS hg19 FANTOM5 0.762274090505242 chr5 180616521 180617006 180616799 Y ZFP62,TRIM52,TRIM41 TRIM7,TRIM41,MIR4638 NA NA NA NA CTC-338M12.5 0 CAGE GSS hg19 FANTOM5 1.52454818101048 chr5 180633694 180634117 180633980 Y NA CTC-338M12.5,TRIM7,TRIM41,MIR4638,CTC-338M12.4,GNB2L1 NA NA NA NA TRIM7 3401 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 304014 304108 304058 Y HUS1B DUSP22 NA NA NA NA DUSP22 14384 CAGE GSS hg19 FANTOM5 2.28682227151573 chr6 541825 541828 541827 Y NA NA NA NA NA NA EXOC2 149289 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 710742 711015 710979 Y HUS1B EXOC2 NA NA NA NA EXOC2 19625 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 711154 711526 711478 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 20037 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 1003791 1004094 1003851 Y HUS1B NA NA NA NA NA FOXQ1 306581 CAGE GSS hg19 FANTOM5 15.2454818101048 chr6 1055850 1056126 1055989 Y FOXQ1 NA NA NA NA NA FOXQ1 254549 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 1311143 1311466 1311342 Y NA FOXQ1 NA NA NA NA FOXQ1 468 CAGE GSS hg19 FANTOM5 7.62274090505242 chr6 1311552 1311897 1311757 Y NA FOXQ1 NA NA NA NA FOXQ1 877 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 1335859 1336005 1335918 Y NA FOXQ1 LOC285768 IMR90 Hi-C 24141950 FOXQ1 25184 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 1391827 1392023 1391957 Y FOXF2 FOXF2 NA NA NA NA FOXF2 3758 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 1609094 1609758 1609395 Y FOXC1 FOXC1 NA NA NA NA FOXC1 413 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 1702305 1702315 1702310 Y NA NA NA NA NA NA FOXC1 93624 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 2081468 2081822 2081645 Y NA NA NA NA NA NA GMDS 162104 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 2128026 2128199 2128099 Y NA NA NA NA NA NA GMDS 115727 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 2299603 2299973 2299788 Y NA NA NA NA NA NA GMDS-AS1 55621 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 2790944 2791090 2791014 Y NA WRNIP1,SERPINB1 SERPINB1 IMR90 Hi-C 24141950 WRNIP1 27296 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 3238745 3238826 3238788 Y NA PSMG4,TUBB2B NA NA NA NA TUBB2B 8781 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 3259939 3260435 3260206 Y NA PSMG4,TUBB2B NA NA NA NA TUBB2B 29975 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 3987035 3987350 3987158 Y NA PRPF4B SLC22A23,FAM50B,PXDC1,TUBB2B,BPHL,LOC100507194 IMR90 Hi-C 24141950 PRPF4B 32151 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 5206171 5206360 5206265 Y NA NA NA NA NA NA LYRM4 52812 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 6885637 6886125 6885854 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 219705 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 7137966 7138068 7138020 Y RIOK1,RIOK1,CAGE1,RREB1,RREB1 RREB1 NA NA NA NA RREB1 32136 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 7544425 7544740 7544519 Y NA DSP,SNRNP48 NA NA NA NA DSP 4617 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 11243333 11243432 11243383 Y MAK,NEDD9 NA NA NA NA NA NEDD9 137149 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 11331718 11332104 11332092 Y NA NEDD9 NA NA NA NA NEDD9 48477 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 13391107 13391478 13391293 Y NA NA NA NA NA NA TBC1D7 64292 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 13709903 13710182 13710119 Y TBC1D7,CD83,RANBP9 RANBP9 SIRT5,NOL7 K562 ChIA-PET 22265404 RANBP9 107 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 15363396 15363519 15363458 Y JARID2 NA NA NA NA NA JARID2 118869 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 16687739 16687973 16687884 Y ATXN1 NA NA NA NA NA RP1-151F17.1 71396 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 18436625 18436893 18436744 Y KDM1B,RNF144B NA NA NA NA NA RNF144B 69846 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 20174199 20174610 20174442 Y MBOAT1 MBOAT1 NA NA NA NA MBOAT1 36060 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 21589338 21589711 21589681 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 2261 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 22718056 22718333 22718272 Y NA NA NA NA NA NA RP1-209A6.1 311676 CAGE GSS hg19 FANTOM5 3.81137045252621 chr6 25050592 25050945 25050684 Y C6orf62 NA FAM65B IMR90 Hi-C 24141950 LRRC16A 226361 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 25525007 25525226 25525060 Y NA NA NA NA NA NA LRRC16A 247701 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 25992254 25993073 25992840 Y NA HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB NA NA NA NA HIST1H3A 25645 CAGE GSS hg19 FANTOM5 10.6718372670734 chr6 26026306 26026795 26026679 Y HIST1H1D,BTN3A3,BTN3A2,BTN3A2,BTN3A1,HIST1H2BD,HIST1H1E,TRIM38,HIST1H3A HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H3C,HIST1H1C NA NA NA NA HIST1H4B 826 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 26126352 26126787 26126533 Y HIST1H4H,HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H2AE,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1C,HIST1H2AC,HIST1H4E,HIST1H1E HFE,HIST1H4C,HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD NA NA NA NA HIST1H2AC 3979 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 26521003 26521206 26521108 Y HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD,HIST1H1D,BTN3A2,BTN3A2,BTN2A2,BTN2A2,BTN2A2,BTN3A1,BTN3A3,BTN2A1,BTN2A1,ABT1 HCG11,HMGN4 NA NA NA NA HCG11 927 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 26533222 26533398 26533310 Y NA HCG11,HMGN4 NA NA NA NA HMGN4 3235 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 26550694 26551000 26550826 Y NA HCG11,HMGN4,ABT1 NA NA NA NA HMGN4 14061 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 27300679 27301026 27300902 Y NA ZNF204P NA NA NA NA ZNF204P 36278 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 29568471 29568641 29568556 Y MOG,GABBR1 GABBR1 NA NA NA NA GABBR1 31112 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 29932777 29932958 29932802 Y HLA-F,TRIM10,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,HLA-A HLA-K,HLA-A,HLA-J NA NA NA NA HLA-A 25740 CAGE GSS hg19 FANTOM5 3.04909636202097 chr6 29933738 29934144 29933980 Y NA HLA-K,HLA-A,HLA-J NA NA NA NA HLA-A 26701 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 30069810 30070038 30069951 Y HLA-E,ABCF1,HLA-F,LOC554223,HLA-G,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,RNF39,RNF39 ZNRD1,ZNRD1-AS1,PPP1R11 NA NA NA NA PPP1R11 37324 CAGE GSS hg19 FANTOM5 3.04909636202097 chr6 30754817 30754946 30754888 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,FLOT1,IER3 FLOT1,IER3 FLOT1,C6orf15,PSORS1C1,DHX16,PPP1R18,TUBB,NRM,IER3,MDC1,DDR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER3 44486 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 30910531 30910726 30910623 Y NA GTF2H4,VARS2 NA NA NA NA VARS2 36512 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 31705604 31706142 31705906 Y HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,PBX2,NEU1,HSPA1L,HSPA1B,HSPA1A,GPSM3,ATF6B,AGPAT1,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1 ABHD16A,DDAH2,CLIC1,VWA7 NA NA NA NA MSH5 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 31789672 31790268 31789876 Y NA VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48,NEU1 NA NA NA NA HSPA1B 3244 CAGE GSS hg19 FANTOM5 2.28682227151573 chr6 32325803 32326070 32325937 Y NA NA NA NA NA NA GPSM3 164503 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 32956037 32956271 32956088 Y NA BRD2,HLA-DMA,BRD2-IT1 NA NA NA NA BRD2-IT1 20028 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 33159164 33159383 33159309 Y NA COL11A2,SLC39A7,RXRB,HSD17B8,RING1 NA NA NA NA COL11A2 888 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 34191726 34192136 34191830 Y C6orf1,HMGA1 CYCSP55,HMGA1,C6orf1,RPL35P2 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 CYCSP55 6510 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 35268720 35268850 35268792 Y TAF11,ZNF76,DEF6,PPARD ZNF76,DEF6,PPARD NA NA NA NA DEF6 5125 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 35570271 35570732 35570662 Y MAPK14,DEF6,PPARD,RPL10A RP3-340B19.2 NA NA NA NA RP3-340B19.2 48621 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 36391024 36391283 36391227 Y SRSF3,CDKN1A,CDKN1A,PXT1 KCTD20 NA NA NA NA KCTD20 17261 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 36802429 36803020 36802653 Y PI16,CPNE5 CPNE5,C6orf89,PPIL1 NA NA NA NA CPNE5 2758 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 37070053 37070857 37070460 Y CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2 NA PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 65122 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 37271813 37272101 37271931 Y PIM1,TBC1D22B TBC1D22B,RNF8 NA NA NA NA RNF8 47647 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 40358061 40358307 40358251 Y NA NA NA NA NA NA RP1-278E11.3 433489 CAGE GSS hg19 FANTOM5 3.04909636202097 chr6 41889955 41890338 41890119 Y FRS3 USP49,MED20,BYSL NA NA NA NA BYSL 3029 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 42219475 42219699 42219588 Y NA MRPS10 NA NA NA NA MRPS10 35872 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 42420719 42421067 42420926 Y NA TRERF1 NA NA NA NA TRERF1 2930 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 44669523 44669744 44669613 Y NA NA CLIC5,SUPT3H,RUNX2 IMR90 Hi-C 24141950 CDC5L 316261 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 45302184 45302302 45302245 Y NA SUPT3H NA NA NA NA SUPT3H 41388 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 45317803 45318343 45317888 Y NA SUPT3H NA NA NA NA SUPT3H 25347 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 45322073 45322342 45322124 Y NA SUPT3H NA NA NA NA SUPT3H 21348 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 46291119 46291322 46291276 Y CLIC5,ENPP4,ENPP5,SLC25A27,RCAN2 NA NA NA NA NA ENPP5 154411 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 46628141 46628475 46628252 Y NA SLC25A27 NA NA NA NA SLC25A27 9463 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 47637505 47637670 47637588 Y OPN5,GPR111 NA GPR115 IMR90 Hi-C 24141950 CD2AP 193980 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 52382425 52382779 52382512 Y NA NA NA NA NA NA TRAM2 56934 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 53376137 53376766 53376496 Y NA NA NA NA NA NA GCLC 103002 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 64150073 64150241 64150156 Y NA NA NA NA NA NA PTP4A1 79425 CAGE GSS hg19 FANTOM5 3.04909636202097 chr6 64151294 64151779 64151706 Y NA NA NA NA NA NA PTP4A1 77887 CAGE GSS hg19 FANTOM5 6.86046681454718 chr6 76498619 76498787 76498703 Y NA MYO6 NA NA NA NA MYO6 41710 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 83756669 83757034 83756938 Y PGM3,DOPEY1 DOPEY1 NA NA NA NA DOPEY1 18351 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 94860177 94860339 94860258 Y NA NA NA NA NA NA EPHA7 732912 CAGE GSS hg19 FANTOM5 9.90956317656814 chr6 95445556 95445774 95445747 Y NA NA NA NA NA NA MANEA 577645 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 108455044 108455377 108455332 Y NA OSTM1 LACE1,ARMC2,NR2E1 IMR90 Hi-C 24141950 OSTM1 29681 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 108883670 108884545 108884024 Y OSTM1,FOXO3,FOXO3 FOXO3 NA NA NA NA FOXO3 4632 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 114662587 114662962 114662866 Y NA NA NA NA NA NA HDAC2 332115 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 118896988 118897011 118897000 Y NA NA NA NA NA NA CEP85L 132227 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 119458757 119458904 119458830 Y NA NA NA NA NA NA MCM9 204430 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 133077551 133077890 133077782 Y STX7,VNN2,VNN2,VNN2 NA NA NA NA NA RPS12 55690 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 137181238 137181571 137181404 Y PEX7 PEX7 NA NA NA NA PEX7 39521 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 137227679 137227915 137227797 Y NA NA NA NA NA NA PEX7 85962 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 140069895 140070090 140070024 Y NA NA CITED2,LOC645434 IMR90 Hi-C 24141950 CITED2 376138 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 142648297 142648491 142648394 Y NA GPR126 NA NA NA NA GPR126 27306 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143130260 143130659 143130530 Y NA NA NA NA NA NA HIVEP2 133679 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 143141084 143141442 143141235 Y HIVEP2 NA NA NA NA NA HIVEP2 122896 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143204143 143204540 143204474 Y NA NA NA NA NA NA HIVEP2 59798 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143206296 143206927 143206703 Y HIVEP2 NA NA NA NA NA HIVEP2 57411 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143234166 143234456 143234293 Y HIVEP2 HIVEP2 NA NA NA NA HIVEP2 29882 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143234736 143235083 143235000 Y HIVEP2 HIVEP2 NA NA NA NA HIVEP2 29255 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143247398 143248213 143248022 Y HIVEP2 HIVEP2 NA NA NA NA HIVEP2 16125 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143516746 143517148 143516792 Y NA NA NA NA NA NA AIG1 137113 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 143718495 143718881 143718689 Y NA NA AIG1 IMR90 Hi-C 24141950 ADAT2 50929 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 144053697 144053884 144053799 Y STX11,PLAGL1 NA NA NA NA NA LTV1 108597 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 144066654 144067070 144066822 Y NA NA NA NA NA NA LTV1 95411 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 144279957 144280354 144280096 Y NA NA NA NA NA NA PLAGL1 103381 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 144585551 144585700 144585606 Y NA NA UTRN IMR90 Hi-C 24141950 TPT1P4 65449 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 149829691 149830032 149829852 Y LATS1,KATNA1,TAB2,SUMO4,ZC3H12D,PPIL4 PPIL4 NA NA NA NA PPIL4 35142 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 151770191 151770744 151770510 Y NA RMND1,C6orf211 NA NA NA NA RMND1 515 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 155720306 155720884 155720629 Y TFB1M NA NA NA NA NA NOX3 54153 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 155770565 155770924 155770748 Y NA NOX3 NA NA NA NA NOX3 4113 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 156403374 156403578 156403476 Y NA NA NA NA NA NA NOX3 628337 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 156571786 156572058 156571922 Y NA NA NA NA NA NA ARID1B 525005 CAGE GSS hg19 FANTOM5 1.52454818101048 chr6 157007979 157008724 157008580 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 88339 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 157101566 157102083 157101700 Y ARID1B ARID1B NA NA NA NA ARID1B 4503 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 157110744 157110907 157110826 Y NA ARID1B NA NA NA NA ARID1B 13681 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 157342507 157343524 157343342 Y ARID1B,ZDHHC14 NA NA NA NA NA ARID1B 245444 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 158254729 158255396 158255020 Y NA SNX9 NA NA NA NA SNX9 12433 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 164215366 164215430 164215398 Y NA NA QKI IMR90 Hi-C 24141950 QKI 382334 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 168789584 168789819 168789635 Y NA NA CCR6 IMR90 Hi-C 24141950 DACT2 71150 CAGE GSS hg19 FANTOM5 2.28682227151573 chr6 169080976 169080998 169080987 Y NA NA NA NA NA NA DACT2 362542 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 169260852 169260926 169260885 Y NA NA WDR27 IMR90 Hi-C 24141950 DACT2 542418 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 169356921 169357287 169357202 Y NA NA WDR27,PHF10,C6orf70,TCTE3,FAM120B,THBS2 IMR90 Hi-C 24141950 DACT2 638487 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 169368330 169368547 169368455 Y NA NA TCTE3,WDR27,C6orf70,THBS2 IMR90 Hi-C 24141950 DACT2 649896 CAGE GSS hg19 FANTOM5 0.762274090505242 chr6 170600439 170600921 170600644 Y NA DLL1,FAM120B NA NA NA NA FAM120B 2648 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 373094 373351 373247 Y PRKAR1B NA FLJ44511,PDGFA MCF7 ChIA-PET 22265404 FAM20C 182125 CAGE GSS hg19 FANTOM5 3.81137045252621 chr7 475920 475996 475984 Y NA NA HEATR2,PRKAR1B MCF7 ChIA-PET 22265404 PDGFA 81937 CAGE GSS hg19 FANTOM5 3.04909636202097 chr7 525455 525590 525542 Y GET4,PDGFA PDGFA NA NA NA NA PDGFA 32343 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 554641 554853 554825 Y NA PDGFA NA NA NA NA PDGFA 3080 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 556288 556672 556400 Y LOC100288524,PDGFA PDGFA NA NA NA NA PDGFA 1261 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 1013884 1014155 1013955 Y NA ADAP1,COX19 NA NA NA NA COX19 649 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 1039490 1039728 1039629 Y NA ADAP1,COX19,GPR146 NA NA NA NA COX19 26255 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 1329910 1330257 1330187 Y NA NA UNCX IMR90 Hi-C 24141950 ZFAND2A 131515 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 1495047 1495214 1495102 Y NA MICALL2,INTS1 NA NA NA NA MICALL2 1924 CAGE GSS hg19 FANTOM5 4.57364454303145 chr7 1709256 1709641 1709356 Y NA NA MAD1L1,KIAA1908 IMR90 Hi-C 24141950 AC074389.9 70286 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 2657383 2657705 2657445 Y IQCE,TTYH3 TTYH3 NA NA NA NA TTYH3 11880 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 2673416 2673872 2673677 Y NA TTYH3 NA NA NA NA TTYH3 3831 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 2681143 2681305 2681209 Y SNX8,LFNG,LFNG,TTYH3 TTYH3 NA NA NA NA TTYH3 11558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 2903227 2903785 2903462 Y LFNG,LFNG,TTYH3,GNA12 AC006028.11,GNA12 GNA12 MCF7 ChIA-PET 22265404 GNA12 21269 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 4681329 4681565 4681443 Y MMD2 NA SDK1,FOXK1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXK1 0 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 4778448 4778853 4778548 Y KIAA0415 NA NA NA NA NA FOXK1 97060 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 5388439 5388783 5388611 Y NA NA NA NA NA NA TNRC18 74262 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 5458136 5458686 5458477 Y FBXL18,TNRC18 TNRC18 NA NA NA NA TNRC18 4359 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 5609541 5610012 5609880 Y SLC29A4,TNRC18,FBXL18,FSCN1 ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACTB 8126 CAGE GSS hg19 FANTOM5 8.38501499555766 chr7 6741580 6741996 6741754 Y C7orf26,ZNF853,C7orf28B,ZNF12 ZNF12,PMS2CL NA NA NA NA ZNF12 2558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 7605671 7605858 7605804 Y NA MIOS NA NA NA NA MIOS 1168 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 12755276 12755712 12755432 Y VWDE,ARL4A ARL4A NA NA NA NA ARL4A 30795 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 12759659 12759934 12759702 Y ARL4A,ARL4A ARL4A ARL4A K562 ChIA-PET 22265404 ARL4A 35178 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 13021746 13022072 13021909 Y NA NA NA NA NA NA ARL4A 297265 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 13057101 13057487 13057331 Y NA NA ARL4A IMR90 Hi-C 24141950 ARL4A 332620 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 13085757 13085829 13085793 Y NA NA ARL4A IMR90 Hi-C 24141950 ARL4A 361276 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 13368007 13368354 13368181 Y NA NA NA NA NA NA ARL4A 643526 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 13512547 13512927 13512737 Y NA NA DGKB IMR90 Hi-C 24141950 ETV1 516123 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 13553275 13553295 13553283 Y NA NA DGKB IMR90 Hi-C 24141950 ETV1 475755 CAGE GSS hg19 FANTOM5 2.28682227151573 chr7 13694099 13694114 13694107 Y NA NA NA NA NA NA ETV1 334936 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 18393162 18393507 18393335 Y NA NA NA NA NA NA HDAC9 268590 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 18563504 18563902 18563528 Y HDAC9,HDAC9,HDAC9 NA NA NA NA NA HDAC9 438932 CAGE GSS hg19 FANTOM5 6.86046681454718 chr7 18575593 18575869 18575740 Y HDAC9,HDAC9,HDAC9 NA NA NA NA NA HDAC9 451021 CAGE GSS hg19 FANTOM5 4.57364454303145 chr7 19146147 19146774 19146493 Y FERD3L,TWIST1 NA NA NA NA NA TWISTNB 599936 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 19186475 19186536 19186492 Y TWIST1,FERD3L NA NA NA NA NA TWISTNB 560174 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 19640371 19640397 19640383 Y TMEM196 NA NA NA NA NA TWISTNB 106313 CAGE GSS hg19 FANTOM5 6.09819272404193 chr7 20006905 20007156 20007031 Y TMEM196 RPL21P75 NA NA NA NA RPL21P75 33190 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 20059372 20059444 20059408 Y NA RPL21P75 NA NA NA NA RPL21P75 19026 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 20163699 20164108 20163996 Y NA NA NA NA NA NA MACC1 90919 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 20197239 20197492 20197368 Y NA NA NA NA NA NA MACC1 57535 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 20202226 20202605 20202544 Y NA NA NA NA NA NA MACC1 52422 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 22011633 22011901 22011770 Y NA CDCA7L NA NA NA NA CDCA7L 27931 CAGE GSS hg19 FANTOM5 4.57364454303145 chr7 23229571 23229876 23229614 Y NA NUPL2 NA NA NA NA NUPL2 10125 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 23510676 23511223 23510889 Y NUPL2,C7orf30,IGF2BP3 IGF2BP3 NA NA NA NA IGF2BP3 2590 CAGE GSS hg19 FANTOM5 3.04909636202097 chr7 23513815 23514383 23514045 Y NUPL2,C7orf30,IGF2BP3 IGF2BP3 MALSU1 K562 ChIA-PET 22265404 IGF2BP3 5729 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 24861129 24861331 24861204 Y C7orf31,DFNA5 NA NA NA NA NA OSBPL3 157922 CAGE GSS hg19 FANTOM5 3.81137045252621 chr7 24950753 24950942 24950870 Y CYCS,OSBPL3 NA NA NA NA NA OSBPL3 68311 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 25009429 25009748 25009721 Y NA OSBPL3 NA NA NA NA OSBPL3 9505 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 25896245 25896461 25896419 Y NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 293399 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 25896515 25897081 25896801 Y NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 292779 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 25990725 25991211 25991018 Y NA NA NA NA NA NA NFE2L3 198649 CAGE GSS hg19 FANTOM5 6.09819272404193 chr7 27774263 27774520 27774391 Y NA TAX1BP1 NA NA NA NA TAX1BP1 2430 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 29163209 29163338 29163275 Y NA NA NA NA NA NA CPVL 69729 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 29951912 29952143 29952027 Y ZNRF2,C7orf41 NA NA NA NA NA AC007285.6 74073 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 30212903 30212961 30212932 Y NA NA NA NA NA NA PLEKHA8 147883 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 32264519 32264896 32264708 Y PDE1C NA NA NA NA NA LSM5 267999 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 32337399 32337512 32337422 Y PDE1C NA NA NA NA NA LSM5 195383 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 32944853 32945232 32945065 Y KBTBD2 KBTBD2,RP9P,FKBP9 NA NA NA NA KBTBD2 13110 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 40088776 40089159 40088837 Y NA NA NA NA NA NA CDK13 101140 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 40611677 40611985 40611889 Y NA NA NA NA NA NA CDK13 624041 CAGE GSS hg19 FANTOM5 2.28682227151573 chr7 42927750 42928726 42928340 Y NA C7orf25,MRPL32,PSMA2 NA NA NA NA C7orf25 21178 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 43644873 43645023 43645002 Y POLM,DBNL,STK17A STK17A NA NA NA NA STK17A 24516 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 43714128 43714419 43714274 Y NA NA NA NA NA NA BLVRA 81860 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 43732901 43733056 43732913 Y DBNL,STK17A NA NA NA NA NA BLVRA 63223 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 45616146 45616461 45616432 Y NA NA NA NA NA NA SEPT7P2 190156 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 47482953 47483112 47483033 Y NA NA NA NA NA NA TNS3 137044 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 47510195 47510559 47510444 Y NA NA NA NA NA NA TNS3 109597 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 55146809 55147410 55146997 Y NA NA NA NA NA NA EGFR 62095 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 55529793 55530311 55530129 Y ZNF713,VOPP1 NA NA NA NA NA LANCL2 98652 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 55725404 55725623 55725518 Y NA NA NA NA NA NA FKBP9L 53322 CAGE GSS hg19 FANTOM5 11.4341113575786 chr7 56168682 56168929 56168809 Y ZNF713 SUMF2,CHCHD2 NA NA NA NA CHCHD2 3340 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 57471842 57471971 57471867 Y NA ZNF716 NA NA NA NA ZNF716 35912 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 72929530 72929887 72929777 Y NA BAZ1B,BCL7B NA NA NA NA BAZ1B 4721 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 73037168 73037552 73037436 Y MLXIPL TBL2 NA NA NA NA TBL2 46047 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 73062013 73062614 73062579 Y BAZ1B,ABHD11,MLXIPL,STX1A WBSCR22,DNAJC30 MLXIPL,MIR4284,WBSCR22,STX1A IMR90 Hi-C 24141950 WBSCR22 32741 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 73866647 73867033 73866768 Y LAT2 GTF2IRD1 NA NA NA NA GTF2IRD1 527 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 74020286 74020548 74020393 Y NA GTF2I NA NA NA NA GTF2I 49446 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 75795833 75796053 75795969 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 120464 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 75947305 75947626 75947472 Y RHBDD2,SRRM3 HSPB1,YWHAG NA NA NA NA HSPB1 17444 CAGE GSS hg19 FANTOM5 3.04909636202097 chr7 76009173 76009680 76009431 Y POR YWHAG,ZP3 NA NA NA NA ZP3 15155 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 76874732 76875015 76874923 Y NA FGL2 NA NA NA NA FGL2 47589 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 79844591 79844960 79844776 Y NA NA NA NA NA NA GNAI1 83320 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 83092459 83092603 83092529 Y NA NA NA NA NA NA SEMA3A 1027437 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 84717663 84717972 84717818 Y NA NA NA NA NA NA SEMA3D 96199 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 85450448 85450904 85450654 Y NA NA NA NA NA NA SEMA3D 636277 CAGE GSS hg19 FANTOM5 50.310089973346 chr7 87555987 87556252 87556130 Y NA ADAM22 NA NA NA NA ADAM22 5206 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 92274593 92274946 92274914 Y CDK6 NA NA NA NA NA FAM133B 56885 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 99178135 99178365 99178354 Y ZNF789 ZNF655 NA NA NA NA ZNF655 24106 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 101929978 101930313 101930074 Y CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2 NA NA NA NA NA PRKRIP1 72006 CAGE GSS hg19 FANTOM5 3.81137045252621 chr7 102555127 102555592 102555343 Y LRRC17 NA NA NA NA NA FBXL13 157694 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 104980501 104980737 104980707 Y NA NA NA NA NA NA SRPK2 57018 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 105459888 105460220 105459903 Y NA CTA-351J1.1 NA NA NA NA CTA-351J1.1 1950 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 105922869 105923204 105923197 Y NA NAMPT NA NA NA NA NAMPT 1568 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 107026511 107026865 107026723 Y NA NA NA NA NA NA DUS4L 175064 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 107555392 107555607 107555420 Y NA DLD NA NA NA NA DLD 25977 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 110849154 110849473 110849333 Y NA NA NA NA NA NA IMMP2L 351100 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 111971895 111972278 111972086 Y NA NA NA NA NA NA IFRD1 88745 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 114056337 114056620 114056363 Y NA NA NA NA NA NA LINC00998 1299669 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 114637628 114638014 114637704 Y NA NA NA NA NA NA TES 1210533 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 115668058 115668101 115668071 Y TES,TFEC NA NA NA NA NA TES 180446 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 120938122 120938485 120938307 Y FAM3C NA NA NA NA NA FAM3C 95933 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 121951485 121951902 121951877 Y NA FEZF1-AS1 NA NA NA NA FEZF1-AS1 9773 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 128170830 128171695 128171212 Y NA RP11-212P7.1 IMPDH1,HILPDA,METTL2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-212P7.1 37047 CAGE GSS hg19 FANTOM5 5.33591863353669 chr7 129419876 129420343 129420085 Y NA NA NRF1,UBE2H MCF7 ChIA-PET 22265404 NRF1 170321 CAGE GSS hg19 FANTOM5 3.04909636202097 chr7 130581597 130582393 130581985 Y NA NA NA NA NA NA MKLN1 210462 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 130799789 130800044 130799917 Y NA MKLN1,LINC-PINT NA NA NA NA LINC-PINT 6854 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 135718216 135718576 135718287 Y NA NA C7orf73 IMR90 Hi-C 24141950 MTPN 58115 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 137387266 137387617 137387499 Y NA NA NA NA NA NA CREB3L2 297196 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 139320693 139321014 139320839 Y PARP12,LUC7L2 NA NA NA NA NA ERHP1 103707 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 139930863 139931473 139931211 Y TBXAS1,JHDM1D NA LOC100134229,JHDM1D MCF7 ChIA-PET 22265404 PARP12 169342 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 146179295 146179312 146179304 Y NA NA NA NA NA NA TPK1 1647807 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 148638273 148638633 148638462 Y NA NA EZH2,ZNF786,ZNF398,ZNF425,CUL1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZH2 58860 CAGE GSS hg19 FANTOM5 1.52454818101048 chr7 149468740 149469267 149468803 Y NA ZNF467 NA NA NA NA ZNF467 172 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 149745351 149745623 149745500 Y NA NA NA NA NA NA ATP6V0E2-AS1 169652 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 152161348 152162014 152161594 Y NA NA NA NA NA NA XRCC2 209236 CAGE GSS hg19 FANTOM5 0.762274090505242 chr7 154730644 154730988 154730877 Y NA NA NA NA NA NA PAXIP1 61806 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 582547 582966 582856 Y ERICH1 NA NA NA NA NA ERICH1 103140 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 637812 637858 637835 Y NA ERICH1 NA NA NA NA ERICH1 48248 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 786605 786748 786705 Y FBXO25 NA NA NA NA NA ERICH1 100499 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 1321281 1321540 1321454 Y NA NA DLGAP2 IMR90 Hi-C 24141950 CLN8 380404 CAGE GSS hg19 FANTOM5 2.28682227151573 chr8 1845111 1845463 1845298 Y KBTBD11 NA NA NA NA NA KBTBD11 74581 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 2263330 2263439 2263406 Y NA NA NA NA NA NA KBTBD11 343286 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 6323096 6323426 6323195 Y NA NA NA NA NA NA MCPH1 60983 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 6415254 6415472 6415345 Y NA ANGPT2 NA NA NA NA ANGPT2 3458 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 6434406 6434611 6434443 Y NA ANGPT2 NA NA NA NA ANGPT2 15476 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 6903640 6903941 6903841 Y DEFA5 DEFA11P,DEFA7P,DEFA5 NA NA NA NA DEFA5 8315 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 8153597 8154098 8153801 Y NA NA MFHAS1,SGK223,CLDN23,FLJ10661 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SGK223 87910 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 9219931 9220273 9220102 Y PPP1R3B NA NA NA NA NA TNKS 191151 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 9408701 9409304 9408905 Y NA TNKS NA NA NA NA TNKS 2120 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 11032163 11032532 11032339 Y NA NA NA NA NA NA MTMR9 107393 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 11310026 11310392 11310209 Y NA NA NA NA NA NA MTMR9 170101 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 14762942 14763011 14762975 Y NA NA NA NA NA NA DLC1 1391775 CAGE GSS hg19 FANTOM5 2.28682227151573 chr8 16476986 16477261 16477122 Y NA NA NA NA NA NA FGF20 380429 CAGE GSS hg19 FANTOM5 2.28682227151573 chr8 19266409 19266742 19266623 Y CSGALNACT1 NA NA NA NA NA SH2D4A 97281 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 19414490 19414802 19414647 Y NA NA NA NA NA NA CSGALNACT1 198738 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 19495004 19495703 19495326 Y NA NA NA NA NA NA CSGALNACT1 117837 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 19533548 19533780 19533688 Y CSGALNACT1 NA NA NA NA NA CSGALNACT1 79760 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 19555269 19555638 19555536 Y NA NA CSGALNACT1,SH2D4A IMR90 Hi-C 24141950 CSGALNACT1 57902 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 19557842 19558052 19557944 Y NA NA CSGALNACT1,SH2D4A IMR90 Hi-C 24141950 CSGALNACT1 55488 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 20055803 20056436 20056187 Y ATP6V1B2 ATP6V1B2 NA NA NA NA ATP6V1B2 2925 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 20058362 20058772 20058410 Y ATP6V1B2 ATP6V1B2 NA NA NA NA ATP6V1B2 5484 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 21775759 21776194 21775973 Y PHYHIP,DOK2,NPM2 XPO7 NA NA NA NA XPO7 579 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 22535910 22536200 22536167 Y NA BIN3 NA NA NA NA BIN3 11249 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 22551843 22553123 22552848 Y PPP3CC,PDLIM2,PDLIM2,BIN3,TNFRSF10C,EGR3 BIN3 NA NA NA NA BIN3 27182 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 23075543 23075864 23075687 Y TNFRSF10B,ENTPD4,ENTPD4 TNFRSF10A,CHMP7,R3HCC1 NA NA NA NA TNFRSF10A 4775 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 23353842 23353942 23353892 Y TNFRSF10C,SLC25A37 ENTPD4,SLC25A37 NKX3-1,SLC25A37,NKX2-6 IMR90 Hi-C 24141950 SLC25A37 30376 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 27387404 27387600 27387502 Y PTK2B,PTK2B,EPHX2 EPHX2 NA NA NA NA EPHX2 41108 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 28258528 28258941 28258737 Y HMBOX1,HMBOX1 ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 310 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 28269273 28269920 28269515 Y ZNF395 ZNF395 NA NA NA NA ZNF395 11055 CAGE GSS hg19 FANTOM5 3.81137045252621 chr8 28569820 28569970 28569874 Y ZNF395,FZD3,EXTL3 EXTL3-AS1 NA NA NA NA EXTL3-AS1 12839 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 29513029 29513506 29513190 Y KIF13B NA DUSP4,MIR3148,C8orf75,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 306844 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 30358644 30358942 30358767 Y NA NA NA NA NA NA RBPMS 118700 CAGE GSS hg19 FANTOM5 1.52454818101048 chr8 35382808 35383133 35382968 Y NA LSM12P1 NA NA NA NA LSM12P1 1527 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 37961561 37961954 37961758 Y NA ASH2L NA NA NA NA ASH2L 801 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 39861721 39861852 39861792 Y NA NA NA NA NA NA ZMAT4 891500 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 41733569 41733873 41733722 Y NA NA NA NA NA NA KAT6A 173635 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 42377318 42377512 42377415 Y NA SLC20A2 NA NA NA NA SLC20A2 17557 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 48903451 48903743 48903597 Y NA PRKDC,MCM4,UBE2V2 NA NA NA NA UBE2V2 15217 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 49426952 49427328 49427172 Y SNAI2 NA SNAI2 IMR90 Hi-C 24141950 RPL29P19 131802 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 56818311 56818706 56818376 Y NA LYN NA NA NA NA LYN 27939 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 56831577 56831790 56831640 Y NA LYN NA NA NA NA LYN 41205 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 60010619 60010999 60010857 Y NA RP11-25K19.1,TOX NA NA NA NA RP11-25K19.1 18600 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 61150810 61150978 61150896 Y NA CA8 NA NA NA NA CA8 40993 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 61850776 61851191 61851141 Y NA NA CHD7 IMR90 Hi-C 24141950 CHD7 261439 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 62445230 62445580 62445420 Y CLVS1,ASPH NA NA NA NA NA ASPH 179575 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 63934936 63935021 63934979 Y NA GGH NA NA NA NA GGH 14709 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 66749896 66750187 66749927 Y PDE7A PDE7A NA NA NA NA PDE7A 2370 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 68098646 68098899 68098873 Y NA NA NA NA NA NA COPS5 104628 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 71980346 71980562 71980455 Y NA NA NA NA NA NA LACTB2 400937 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 75135577 75135926 75135753 Y NA NA NA NA NA NA GDAP1 95439 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 75515244 75515546 75515314 Y NA RP11-730G20.2 NA NA NA NA RP11-730G20.2 765 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 77590079 77590470 77590424 Y ZFHX4 ZFHX4 NA NA NA NA ZFHX4 984 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 80696935 80697150 80697007 Y HEY1 HEY1 MRPS28,HEY1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEY1 18837 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 81587419 81587669 81587654 Y NA NA NA NA NA NA ZBTB10 191565 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 81695028 81695405 81695288 Y NA NA NA NA NA NA ZBTB10 299174 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 95003706 95004122 95004001 Y NA NA LINC00535,RBM12B,RAD54B,CDH17,GEM IMR90 Hi-C 24141950 KB-1247B1.1 209158 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 98877971 98878157 98878074 Y NA RPS23P1,MATN2 NA NA NA NA MATN2 911 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 99637150 99637421 99637401 Y NA NA NA NA NA NA STK3 315634 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 101920723 101921107 101920870 Y NA YWHAZ NA NA NA NA YWHAZ 42509 CAGE GSS hg19 FANTOM5 1.52454818101048 chr8 102075998 102076526 102076187 Y GRHL2 NA NA NA NA NA YWHAZ 112382 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 103639654 103639717 103639685 Y NA KLF10 UBR5,ODF1,AZIN1 IMR90 Hi-C 24141950 KLF10 26413 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 104059632 104059708 104059689 Y NA ATP6V1C1 NA NA NA NA ATP6V1C1 28341 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 112672404 112672565 112672485 Y NA NA NA NA NA NA RP11-709P2.1 1714333 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 114909341 114909408 114909375 Y NA NA NA NA NA NA RP11-709P2.1 522443 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 121442839 121443137 121442988 Y NA MTBP,MRPL13 NA NA NA NA MTBP 12503 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 122755244 122755615 122755430 Y NA NA NA NA NA NA HAS2 103614 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 125367728 125368050 125367886 Y TRMT12,TATDN1,NDUFB9 TMEM65 NA NA NA NA TMEM65 14883 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 126231490 126231859 126231657 Y MTSS1,KIAA0196,NSMCE2,TRIB1 NA NA NA NA NA KIAA0196 129408 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 126290719 126290948 126290836 Y NA NA NA NA NA NA TRIB1 149615 CAGE GSS hg19 FANTOM5 2.28682227151573 chr8 126650987 126651167 126651050 Y NA NA NSMCE2,KIAA0196,TRIB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TRIB1 210424 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 128888391 128888698 128888485 Y NA NA NA NA NA NA PVT1 83612 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 129569050 129569202 129569118 Y NA NA MYC,PVT1 IMR90 Hi-C 24141950 RNU4-25P 548193 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 131271729 131272058 131271952 Y NA NA NA NA NA NA ASAP1 181848 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 132928633 132929053 132928845 Y NA EFR3A NA NA NA NA EFR3A 14298 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 140710203 140710577 140710390 Y KCNK9 NA NA NA NA NA TRAPPC9 756101 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 140716297 140716707 140716660 Y NA NA NA NA NA NA TRAPPC9 749971 CAGE GSS hg19 FANTOM5 1.52454818101048 chr8 141474376 141475403 141474918 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 TRAPPC9 7698 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 141479707 141479835 141479741 Y NA TRAPPC9,CHRAC1 EIF2C2,CHRAC1,TRAPPC9,PTK2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TRAPPC9 13029 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 141598802 141599709 141599120 Y TRAPPC9,CHRAC1,EIF2C2 NA NA NA NA NA CHRAC1 79405 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 141606825 141607480 141607253 Y TRAPPC9,CHRAC1,EIF2C2 NA NA NA NA NA CHRAC1 87428 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 141725005 141725293 141725149 Y NA NA NA NA NA NA CHRAC1 205608 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 142424633 142425265 142424919 Y NA PTP4A3,HNRNPA1P38 NA NA NA NA PTP4A3 24540 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 143353648 143353818 143353814 Y TSNARE1,BAI1 NA NA NA NA NA TSNARE1 128783 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 144094701 144094997 144094860 Y LY6K,C8orf55 LY6E NA NA NA NA LY6E 2402 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 144360422 144361034 144360946 Y ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT ZFP41,GLI4,RP13-582O9.5,ZNF696 NA NA NA NA RP13-582O9.5 826 CAGE GSS hg19 FANTOM5 3.04909636202097 chr8 144785317 144785390 144785376 Y NA ZNF707,FAM83H NA NA NA NA ZNF707 20695 CAGE GSS hg19 FANTOM5 0.762274090505242 chr8 144799188 144799437 144799334 Y MAPK15 ZNF707,FAM83H NA NA NA NA FAM83H 14534 CAGE GSS hg19 FANTOM5 3.04909636202097 chr8 144820199 144820570 144820386 Y RHPN1,C8orf73,FAM83H FAM83H NA NA NA NA FAM83H 6228 CAGE GSS hg19 FANTOM5 1.52454818101048 chr8 146125688 146125902 146125777 Y ZNF250 COMMD5,ZNF250,ZNF16 NA NA NA NA ZNF250 135 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 749759 749963 749884 Y NA NA NA NA NA NA KANK1 281468 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 2241944 2242239 2242031 Y NA NA NA NA NA NA SMARCA2 228602 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 6680895 6681975 6681336 Y UHRF2,KDM4C RP11-106A1.2,KDM4C KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 36888 CAGE GSS hg19 FANTOM5 1.52454818101048 chr9 7656703 7657015 7656841 Y NA NA NA NA NA NA RPL4P5 180383 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 14322295 14322910 14322674 Y ZDHHC21,NFIB NA NA NA NA NA ZDHHC21 368559 CAGE GSS hg19 FANTOM5 1.52454818101048 chr9 14353468 14353873 14353760 Y NFIB NA NA NA NA NA ZDHHC21 337596 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 35603992 35604628 35604112 Y TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2 TESK1 NA NA NA NA TESK1 625 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 35726275 35726587 35726326 Y NA TPM2,CREB3,TLN1,RGP1,GBA2 NA NA NA NA CREB3 3745 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 37963992 37964293 37964120 Y NA NA NA NA NA NA SHB 102917 CAGE GSS hg19 FANTOM5 3.04909636202097 chr9 68419808 68420298 68419990 Y NA NA NA NA NA NA FAM122A 2972666 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 73033763 73035382 73035076 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 6223 CAGE GSS hg19 FANTOM5 3.04909636202097 chr9 73402441 73402694 73402566 Y NA MIR204 NA NA NA NA MIR204 20306 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 74371995 74372048 74372016 Y NA NA NA NA NA NA TMEM2 57558 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 76461085 76461465 76461249 Y NA NA NA NA NA NA C9orf40 1104337 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 92296049 92296284 92296165 Y NA NA NA NA NA NA SEMA4D 185004 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 93975322 93975401 93975365 Y NA NA NA NA NA NA AUH 146794 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 94834730 94835154 94834963 Y OGN SPTLC1 NA NA NA NA SPTLC1 40512 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 95826654 95827012 95826884 Y FGD3,FAM120AOS,SUSD3 SUSD3,C9orf89 NA NA NA NA SUSD3 7665 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 96928143 96928630 96928259 Y NA NA NA NA NA NA ZNF169 90963 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 96928795 96929410 96929111 Y NA NA NA NA NA NA ZNF169 90183 CAGE GSS hg19 FANTOM5 1.52454818101048 chr9 97679079 97679413 97679326 Y NA NA NA NA NA NA C9orf3 192096 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 97881296 97881429 97881363 Y FBP1 NA NA NA NA NA FANCC 196562 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 98344805 98344906 98344856 Y NA NA FANCC,SLC35D2,LINC00092,C9orf102,LOC158435 IMR90 Hi-C 24141950 PTCH1 67466 CAGE GSS hg19 FANTOM5 1.52454818101048 chr9 100743401 100743685 100743451 Y NA NA NA NA NA NA ANP32B 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 112076384 112076614 112076499 Y NA EPB41L4B NA NA NA NA EPB41L4B 4630 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 115657106 115657497 115657253 Y SNX30,SLC31A2,FKBP15,SLC46A2 NA NA NA NA NA SNX30 145988 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 118350454 118350525 118350489 Y DEC1 NA ASTN2,PAPPA,TNC,DEC1,LOC100128505 IMR90 Hi-C 24141950 C9orf91 978968 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 119055041 119055304 119055148 Y PAPPA NA NA NA NA NA TRIM32 392277 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 123251976 123252022 123252001 Y CDK5RAP2 NA NA NA NA NA CDK5RAP2 88426 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 124361597 124361984 124361689 Y NA NA NA NA NA NA STOM 231066 CAGE GSS hg19 FANTOM5 7.62274090505242 chr9 126597388 126597650 126597587 Y DENND1A NA NA NA NA NA DENND1A 92781 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 127519137 127519296 127519279 Y NA NR6A1,OLFML2A NA NA NA NA NR6A1 12293 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 128172483 128172773 128172647 Y NA NA PBX3 MCF7 ChIA-PET 22265404 GAPVD1 150410 CAGE GSS hg19 FANTOM5 7.62274090505242 chr9 128530354 128530667 128530385 Y NA PBX3 NA NA NA NA PBX3 22730 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 129405263 129405520 129405376 Y NA LMX1B NA NA NA NA LMX1B 30541 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 129483874 129484165 129483990 Y NA NA NA NA NA NA ZBTB43 81120 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 130307843 130308200 130307973 Y SLC2A8,FAM129B FAM129B NA NA NA NA FAM129B 31068 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 130764123 130764312 130764223 Y FAM129B,TOR2A,CDK9,FPGS FAM102A FAM102A,DPM2,PIP5KL1,SLC25A25,NAIF1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM102A 23331 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 131007254 131007504 131007363 Y URM1,CERCAM,FPGS,FPGS,ST6GALNAC6,ST6GALNAC4,PIP5KL1,CIZ1 DNM1,CIZ1,SWI5,GOLGA2 NA NA NA NA SWI5 28154 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 132040752 132040968 132040856 Y NA RP11-344B5.2 C9orf106,IER5L,LOC100506190,PPP2R4,CRAT,C9orf50,METTL11A IMR90,MCF7,HELA,K562 Hi-C,ChIA-PET,5C 24141950,22265404,22955621 RP11-344B5.2 1769 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 132175926 132176326 132176076 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00963 67404 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 132257886 132258547 132258348 Y NA LINC00963 NA NA NA NA LINC00963 14156 CAGE GSS hg19 FANTOM5 1.52454818101048 chr9 132369856 132370376 132370136 Y CRAT,IER5L,C9orf106,PRRX2,GPR107 ASB6 NA NA NA NA ASB6 32068 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 132712659 132713039 132713009 Y NA NA NA NA NA NA GPR107 100666 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 134150177 134150420 134150245 Y RAPGEF1,RAPGEF1,QRFP,FAM78A PPAPDC3 NA NA NA NA PPAPDC3 12661 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 135197315 135197652 135197484 Y NA SETX NA NA NA NA SETX 30720 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 136019465 136020353 136020023 Y NA RALGDS NA NA NA NA RALGDS 16948 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 137233458 137233505 137233466 Y RXRA RXRA NA NA NA NA RXRA 26514 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 137739401 137739789 137739783 Y NA NA NA NA NA NA COL5A1 207781 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 138348639 138348707 138348673 Y NA PPP1R26,MRPS2,C9orf116 NA NA NA NA PPP1R26 20218 CAGE GSS hg19 FANTOM5 2.28682227151573 chr9 139223291 139223329 139223306 Y NA GPSM1,DNLZ NA NA NA NA GPSM1 3359 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 139406218 139406717 139406552 Y TRAF2,FAM69B,EGFL7,EGFL7 SEC16A,NOTCH1,RP11-611D20.2 SEC16A,C9orf163 K562,MCF7 ChIA-PET 22265404 NOTCH1 31597 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 139420614 139420765 139420738 Y PTGDS,LCNL1,C9orf172 NOTCH1,RP11-611D20.2 NA NA NA NA NOTCH1 17549 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 139858882 139858961 139858922 Y NA FBXW5,PTGDS,C9orf142,CLIC3 NA NA NA NA PTGDS 10995 CAGE GSS hg19 FANTOM5 1.52454818101048 chr9 140023271 140023604 140023504 Y EHMT1,ABCA2,PNPLA7,NRARP,ANAPC2 MAN1B1,DPP7,MIR3621 NA NA NA NA DPP7 15642 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 140023869 140024391 140024239 Y NA MAN1B1,DPP7,MIR3621 GRIN1 K562 ChIA-PET 22265404 DPP7 16240 CAGE GSS hg19 FANTOM5 3.81137045252621 chr9 140117588 140118357 140118103 Y C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1 ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B NA NA NA NA TUBB4B 15308 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 140134697 140134985 140134927 Y C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3 TPRN,TMEM203,NDOR1,TUBB4B NA NA NA NA TUBB4B 1032 CAGE GSS hg19 FANTOM5 2.28682227151573 chr9 140189199 140189592 140189229 Y NA NRARP NA NA NA NA NRARP 5111 CAGE GSS hg19 FANTOM5 0.762274090505242 chr9 140190695 140190800 140190760 Y NA NRARP NA NA NA NA NRARP 3903 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 3591324 3591658 3591618 Y NA PRKX NA NA NA NA PRKX 37991 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 3732842 3733263 3733002 Y PRKX NA NA NA NA NA PRKX 103193 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 9700566 9700851 9700709 Y LOC100288814 NA NA NA NA NA TBL1X 271231 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 15354246 15354416 15354344 Y ZRSR2,CA5B,MOSPD2,PIGA PIGA NA NA NA NA PIGA 2570 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 18693104 18693424 18693141 Y PHKA2,CDKL5 NA NA NA NA NA CDKL5 251401 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 20154251 20154286 20154269 Y NA EIF1AX NA NA NA NA EIF1AX 3676 CAGE GSS hg19 FANTOM5 5.33591863353669 chrX 20283183 20283718 20283506 Y SH3KBP1,RPS6KA3 NA NA NA NA NA RPS6KA3 0 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 20628422 20628647 20628433 Y NA NA NA NA NA NA RPS6KA3 344899 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 25664451 25664736 25664645 Y MAGEB18 NA NA NA NA NA POLA1 954415 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 29496854 29497166 29496936 Y NA NA NA NA NA NA FTLP2 1149249 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 39490684 39490840 39490763 Y NA NA NA NA NA NA GAPDHP1 154550 CAGE GSS hg19 FANTOM5 4.57364454303145 chrX 39614973 39615267 39615108 Y NA GAPDHP1 NA NA NA NA GAPDHP1 30123 CAGE GSS hg19 FANTOM5 2.28682227151573 chrX 39646201 39646652 39646229 Y NA GAPDHP1 NA NA NA NA GAPDHP1 811 CAGE GSS hg19 FANTOM5 1.52454818101048 chrX 39680161 39680842 39680511 Y NA GAPDHP1 NA NA NA NA GAPDHP1 34771 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 39806135 39806423 39806318 Y NA NA BCOR IMR90 Hi-C 24141950 AC092198.1 60106 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 39865489 39865898 39865566 Y BCOR,BCOR AC092198.1 NA NA NA NA AC092198.1 631 CAGE GSS hg19 FANTOM5 16.7700299911153 chrX 39866067 39866462 39866265 Y BCOR,BCOR AC092198.1 NA NA NA NA AC092198.1 67 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 39873339 39874259 39873676 Y NA AC092198.1 BCOR MCF7,K562 ChIA-PET 22265404 AC092198.1 6810 CAGE GSS hg19 FANTOM5 1.52454818101048 chrX 39949495 39949781 39949700 Y NA NA NA NA NA NA AC092198.1 82966 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 39963931 39964200 39963990 Y BCOR NA NA NA NA NA BCOR 70382 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 39965558 39965902 39965820 Y BCOR,BCOR NA NA NA NA NA BCOR 68680 CAGE GSS hg19 FANTOM5 3.81137045252621 chrX 39968308 39968728 39968376 Y BCOR NA NA NA NA NA BCOR 65854 CAGE GSS hg19 FANTOM5 3.04909636202097 chrX 40013089 40013254 40013186 Y NA BCOR NA NA NA NA BCOR 21328 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 40014046 40014813 40014331 Y BCOR BCOR NA NA NA NA BCOR 19769 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 40026864 40027458 40027209 Y NA BCOR NA NA NA NA BCOR 7124 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 40034694 40035505 40035056 Y BCOR,CXorf38,ATP6AP2,BCOR BCOR NA NA NA NA BCOR 112 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 45667637 45667718 45667664 Y NA RP5-1158E12.3 NA NA NA NA RP5-1158E12.3 41202 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 47415526 47415793 47415667 Y NA ARAF,TIMP1 NA NA NA NA ARAF 2723 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 52004971 52005124 52005057 Y NA NA NA NA NA NA MAGED4 79052 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 52964244 52964539 52964367 Y TSPYL2,KDM5C,IQSEC2,FAM156A FAM156B NA NA NA NA FAM156B 45908 CAGE GSS hg19 FANTOM5 1.52454818101048 chrX 53155305 53155690 53155322 Y XAGE5,FAM156A,FAM156B,FAM156A,GPR173,IQSEC2,TSPYL2 TSPYL2,LINC01155 KDM5C IMR90 Hi-C 24141950 LINC01155 33978 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 53467837 53468052 53468003 Y KDM5C SMC1A,HSD17B10 NA NA NA NA HSD17B10 8517 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 56269843 56269989 56269918 Y NA NA NA NA NA NA UBQLN2 318037 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 56653853 56654061 56653957 Y NA NA NA NA NA NA UBQLN2 65827 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 68004355 68004677 68004478 Y NA SERBP1P1,EFNB1 NA NA NA NA SERBP1P1 3040 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 68058070 68058239 68058155 Y NA EFNB1 NA NA NA NA EFNB1 11230 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 69653784 69653948 69653832 Y NA DLG3 NA NA NA NA DLG3 8763 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 69655002 69655313 69655257 Y DLG3 DLG3 NA NA NA NA DLG3 7398 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 70401853 70402134 70401993 Y IL2RG,MED12,TAF1,OGT,CXCR3,NONO GJB1 NA NA NA NA GJB1 30910 CAGE GSS hg19 FANTOM5 1.52454818101048 chrX 70640504 70640913 70640718 Y NA NA NA NA NA NA TAF1 56390 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 71402877 71403170 71402921 Y NA PIN4 NA NA NA NA PIN4 3674 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 71635914 71636037 71635976 Y HDAC8 NA NA NA NA NA RPS4X 140764 CAGE GSS hg19 FANTOM5 1.52454818101048 chrX 73228588 73229157 73228689 Y CHIC1 NA NA NA NA NA JPX 66429 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 103628998 103629151 103629075 Y NA NA NA NA NA NA FAM199X 219697 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 110566693 110566855 110566742 Y PAK3,DCX,DCX,DCX NA NA NA NA NA EIF4BP7 295862 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 112084647 112084962 112084847 Y AMOT,AMOT AMOT NA NA NA NA AMOT 2604 CAGE GSS hg19 FANTOM5 1.52454818101048 chrX 117896439 117896822 117896632 Y NA IL13RA1 NA NA NA NA IL13RA1 36904 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 123735078 123735231 123735154 Y NA NA NA NA NA NA STAG2 643016 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 125606277 125607115 125606755 Y NA MTND4P24 NA NA NA NA MTND4P24 1409 CAGE GSS hg19 FANTOM5 3.04909636202097 chrX 128656237 128656454 128656444 Y NA SMARCA1,OCRL NA NA NA NA SMARCA1 760 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 129400519 129400680 129400638 Y NA ZNF280C NA NA NA NA ZNF280C 193 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 149863588 149863865 149863755 Y MTM1,MTMR1 MTMR1 NA NA NA NA MTMR1 4153 CAGE GSS hg19 FANTOM5 0.762274090505242 chrX 153596671 153598676 153598064 Y NA FLNA,EMD,RPL10,TAZ,DNASE1L1 NA NA NA NA FLNA 2330 CAGE GSS hg19 FANTOM5 0.762274090505242 chrY 10023047 10023682 10023281 Y NA NA NA NA NA NA RNU1-107P 17843807 CAGE GSS hg19 FANTOM5 0.762274090505242 chrY 15207344 15207441 15207401 Y NA NA NA NA NA NA RNU1-107P 12660048 CAGE GSS hg19 FANTOM5 0.762274090505242