chr1 2574343 2574764 2574705 Y MORN1,PANK4,ACTRT2,MMEL1 NA NA NA NA NA FAM213B 58413 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 3229711 3230157 3229865 Y NA NA NA NA NA NA MEGF6 295902 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 3420761 3421065 3420920 Y NA NA NA NA NA NA MEGF6 104994 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 6943772 6944262 6943813 Y NA NA NA NA NA NA CAMTA1 100388 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 8137301 8137521 8137361 Y NA NA ERRFI1,PARK7,TNFRSF9,SLC45A1,RERE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 52933 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 8173446 8173525 8173493 Y NA NA ERRFI1,RERE,SLC45A1 IMR90 Hi-C 24141950 ERRFI1 89078 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 8198088 8198334 8198235 Y NA NA ERRFI1,SLC45A1,RERE,PARK7 IMR90 Hi-C 24141950 ERRFI1 113720 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 16212759 16213091 16212941 Y EFHD2,PLEKHM2,ZBTB17,SPEN SPEN NA NA NA NA SPEN 40400 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 16669074 16669169 16669123 Y NA FBXO42 NA NA NA NA FBXO42 7780 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 16825333 16826291 16825792 Y NA NA SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 NECAP2 60166 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 17231253 17231704 17231392 Y PADI4,PADI2 NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 104719 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 17865185 17865523 17865202 Y ARHGEF10L ARHGEF10L NA NA NA NA ARHGEF10L 855 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 20930711 20931037 20930891 Y CDA CDA,PINK1 PINK1 IMR90 Hi-C 24141950 CDA 17270 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 21588176 21588724 21588522 Y ECE1,ECE1 NA NA NA NA NA ECE1 81273 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 21588829 21589430 21588896 Y ECE1,ALPL,EIF4G3,ECE1,ECE1 NA NA NA NA NA ECE1 80567 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 22089036 22089375 22089206 Y NA USP48 RAP1GAP IMR90 Hi-C 24141950 USP48 18724 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 23888678 23889201 23888997 Y ID3 ID3 NA NA NA NA ID3 4393 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 26827232 26827869 26827508 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 30291 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 27024638 27025138 27024825 Y SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV ARID1A NA NA NA NA ARID1A 4114 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 27907931 27908052 27907995 Y NA AHDC1 NA NA NA NA AHDC1 20890 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 27928507 27928973 27928740 Y NA NA NA NA NA NA AHDC1 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 28098635 28098880 28098690 Y SESN2,PTAFR,PTAFR,EYA3,FGR,FGR,FGR,STX12 FAM76A,STX12 NA NA NA NA STX12 941 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 31627566 31627958 31627874 Y SDC3,HCRTR1,NKAIN1 NA SNRNP40,PUM1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 90728 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 31628220 31628457 31628359 Y NA NA PUM1,NKAIN1,SERINC2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 91382 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 33450600 33450837 33450735 Y RNF19B RNF19B RNF19B,AK2 IMR90 Hi-C 24141950 RNF19B 22314 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 33515825 33516245 33515960 Y RNF19B AK2,ADC AK2,S100PBP,RNF19B,TMEM54,FNDC5,HPCA,ADC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 AK2 28352 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 37937293 37937526 37937471 Y YRDC,MTF1,C1orf122,ZC3H12A LINC01137,ZC3H12A,MEAF6 NA NA NA NA LINC01137 486 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 43389220 43390772 43390027 Y NA SLC2A1 NA NA NA NA SLC2A1 31758 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 51245588 51245972 51245952 Y NA NA NA NA NA NA FAF1 177963 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 57043287 57044160 57043621 Y PRKAA2,PPAP2B NA NA NA NA NA PPAP2B 64814 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 60009140 60009290 60009214 Y CYP2J2 NA NA NA NA NA FGGY 248830 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 60598724 60598934 60598848 Y NA NA NA NA NA NA NFIA 729997 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 65517662 65517702 65517682 Y NA NA NA NA NA NA JAK1 87475 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 67029939 67030347 67030122 Y PDE4B SGIP1 NA NA NA NA SGIP1 32873 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 68257383 68257657 68257565 Y NA GNG12 NA NA NA NA GNG12 39493 CAGE HIRS-BM hg19 FANTOM5 37.6630822303772 chr1 68340774 68341128 68340951 Y NA GNG12 NA NA NA NA GNG12 43624 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 84710038 84710507 84710127 Y NA NA NA NA NA NA PRKACB 168293 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 85143846 85143980 85143979 Y SAMD13,SAMD13,DNASE2B,DNASE2B,LPAR3,SSX2IP,SSX2IP SSX2IP NA NA NA NA SSX2IP 10506 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 85643319 85643587 85643547 Y NA SYDE2 MIR4423 IMR90 Hi-C 24141950 SYDE2 21142 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 86072885 86073441 86073156 Y CYR61 DDAH1,CYR61 DDAH1,ZNHIT6,CYR61,COL24A1 IMR90 Hi-C 24141950 CYR61 28441 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 94021310 94021626 94021469 Y NA NA NA NA NA NA FNBP1L 109622 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 95007995 95008302 95008221 Y NA F3 NA NA NA NA F3 2639 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 98606055 98606462 98606113 Y NA NA NA NA NA NA DPYD 221450 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 101202267 101202571 101202418 Y NA VCAM1 NA NA NA NA VCAM1 18969 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 110454846 110455290 110455005 Y GSTM2,CSF1 CSF1 NA NA NA NA CSF1 3982 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 112013331 112014031 112013881 Y C1orf183,C1orf183,RAP1A,C1orf162 ATP5F1,WDR77 NA NA NA NA WDR77 23333 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 113072370 113072489 113072380 Y NA NA NA NA NA NA WNT2B 65207 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 149821015 149821647 149821349 Y NA HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB NA NA NA NA HIST2H2AA4 372 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 153584539 153584862 153584750 Y NA S100A16,CHTOP,S100A13,SNAPIN NA NA NA NA S100A16 918 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 155164183 155164959 155164537 Y NA KRTCAP2,MIR92B,MTX1,THBS3,GBA NA NA NA NA MIR92B 1215 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 156066868 156067143 156067009 Y MEF2D,MSTO1,YY1AP1,YY1AP1,YY1AP1,GON4L LAMTOR2,LMNA LMNA,MEX3A K562,MCF7 ChIA-PET 22265404 LMNA 16504 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 159859603 159860031 159859945 Y SLAMF9,COPA,SLAMF8,TAGLN2 CCDC19,TAGLN2 C1orf204,SLAMF8 IMR90 Hi-C 24141950 CCDC19 7922 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr1 161324130 161324422 161324290 Y NA SDHC NA NA NA NA SDHC 42083 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 161359666 161360218 161359899 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 77619 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 161991847 161991976 161991911 Y OLFML2B OLFML2B NA NA NA NA OLFML2B 203 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 162830850 162831244 162831104 Y NA C1orf110 NA NA NA NA C1orf110 5361 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 172900674 172900969 172900756 Y TNFSF18 NA TNFSF4,LOC100506023,TNFSF18,DARS2,CENPL,ZBTB37,GAS5 IMR90 Hi-C 24141950 TNFSF18 117134 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 173328578 173328674 173328661 Y NA NA NA NA NA NA PRDX6 115731 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 178231351 178231525 178231428 Y NA NA NA NA NA NA RASAL2 170487 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 181104265 181104352 181104277 Y NA IER5 STX6,ACBD6,MR1,XPR1,KIAA1614,IER5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER5 48627 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 183241451 183241867 183241650 Y LAMC1 NA LAMC2 IMR90 Hi-C 24141950 NMNAT2 143870 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 184033703 184034036 184033838 Y NA TSEN15 NA NA NA NA TSEN15 14892 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 192508796 192509150 192509060 Y NA NA UCHL5,RGS1 IMR90 Hi-C 24141950 RGS2 267019 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 198124316 198124670 198124458 Y C1orf53,NEK7 NEK7 NA NA NA NA NEK7 223 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 201739210 201739573 201739298 Y CSRP1,CSRP1,CSRP1,NAV1,NAV1,SHISA4 NA NA NA NA NA IPO9 56696 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 205090261 205090406 205090392 Y NA RBBP5 CNTN2 IMR90 Hi-C 24141950 RBBP5 1118 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 216774004 216774285 216774188 Y ESRRG,ESRRG NA NA NA NA NA GPATCH2 1028139 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 221567491 221567844 221567649 Y NA NA C1orf140,HLX IMR90 Hi-C 24141950 DUSP10 345674 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 221882292 221882723 221882499 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 30795 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 222638782 222639204 222638963 Y NA NA DUSP10,MIA3,AIDA,BROX IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MIA3 150224 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 224180261 224180516 224180350 Y NA NA NA NA NA NA FBXO28 119273 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 226890865 226891416 226891300 Y ITPKB ITPKB NA NA NA NA ITPKB 33608 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 226997737 226998213 226997994 Y C1orf95,ITPKB NA ITPKB,C1orf95 IMR90 Hi-C 24141950 ITPKB 72713 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 227009018 227009221 227009120 Y NA NA ITPKB,C1orf95 IMR90 Hi-C 24141950 ITPKB 83994 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 232765644 232766127 232765957 Y NA NA TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 NTPCR 318224 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr1 234748100 234748931 234748566 Y IRF2BP2 IRF2BP2 NA NA NA NA IRF2BP2 4829 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 235246558 235246857 235246620 Y ARID4B,ARID4B TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 43394 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr1 244613820 244614139 244614120 Y NA ADSS,C1orf101 NA NA NA NA ADSS 384 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 5333644 5334212 5333929 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 118302 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 7709539 7709689 7709614 Y ITIH5 ITIH5 NA NA NA NA ITIH5 2578 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 13908290 13908478 13908416 Y NA NA NA NA NA NA PRPF18 281363 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 13915234 13915426 13915347 Y NA NA NA NA NA NA PRPF18 288307 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 21824374 21824606 21824490 Y NA MLLT10 NA NA NA NA MLLT10 3280 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 21991974 21992366 21992143 Y NA NA NA NA NA NA MLLT10 170880 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 30096449 30096548 30096521 Y NA NA SVIL,KIAA1462 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SVIL 72739 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 32048872 32049424 32049213 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166318 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 35028968 35029134 35029048 Y NA NA NA NA NA NA PARD3 73119 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 43633157 43633403 43633253 Y RASGEF1A CSGALNACT2 NA NA NA NA CSGALNACT2 1223 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr10 50388476 50388821 50388639 Y C10orf128 NA NA NA NA NA VSTM4 66922 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 50776206 50776746 50776485 Y PGBD3,ERCC6,CHAT,SLC18A3 PGBD3,ERCC6 NA NA NA NA ERCC6 30622 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr10 50787572 50787883 50787845 Y NA PGBD3,ERCC6 NA NA NA NA ERCC6 41988 CAGE HIRS-BM hg19 FANTOM5 6.27718037172953 chr10 50791340 50791620 50791497 Y NA PGBD3,ERCC6 NA NA NA NA ERCC6 45756 CAGE HIRS-BM hg19 FANTOM5 37.6630822303772 chr10 52751732 52752116 52752062 Y PRKG1 PRKG1 NA NA NA NA PRKG1 2787 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 54224630 54224737 54224684 Y NA NA DKK1,LOC100506939 IMR90 Hi-C 24141950 DKK1 152574 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 61632760 61633170 61633000 Y NA CCDC6 NA NA NA NA CCDC6 31244 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 62307595 62307995 62307795 Y ANK3 NA NA NA NA NA CDK1 228094 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 64004719 64005076 64004899 Y ARID5B NA NA NA NA NA ZNF365 126875 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 64300187 64300318 64300222 Y EGR2,EGR2 NA NA NA NA NA ZNF365 168236 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 65460115 65460254 65460185 Y NA NA JMJD1C IMR90 Hi-C 24141950 REEP3 180992 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 69822197 69822546 69822385 Y NA HERC4 NA NA NA NA HERC4 10559 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 72424506 72424875 72424691 Y ADAMTS14 ADAMTS14 KIAA1274,PRF1,ADAMTS14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ADAMTS14 5684 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 73526896 73527242 73527133 Y CDH23,C10orf54,C10orf105 C10orf54 NA NA NA NA C10orf54 4013 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 74085147 74085316 74085305 Y NA DNAJB12 NA NA NA NA DNAJB12 27672 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 79685177 79685609 79685373 Y NA DLG5 NA NA NA NA DLG5 799 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr10 88517208 88517667 88517486 Y GLUD1,BMPR1A BMPR1A NA NA NA NA BMPR1A 2801 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 90711253 90711764 90711560 Y LIPF,CH25H,ACTA2 FAS,ACTA2 NA NA NA NA FAS 36650 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 92783161 92783490 92783369 Y NA NA PCGF5,ANKRD1 IMR90 Hi-C 24141950 ANKRD1 104128 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr10 93320562 93320757 93320661 Y NA NA NA NA NA NA PPP1R3C 70054 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr10 95225325 95225770 95225711 Y MYOF MYOF,CEP55 NA NA NA NA MYOF 14304 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr10 95228207 95228553 95228471 Y MYOF,CEP55,CEP55 MYOF,CEP55 NA NA NA NA MYOF 11521 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr10 98415742 98416114 98415770 Y LCOR,PIK3AP1,TM9SF3 NA NA NA NA NA TM9SF3 70533 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 104401686 104402330 104401988 Y NA NA NA NA NA NA ARL3 69834 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 105427179 105427487 105427329 Y NA NA NA NA NA NA SH3PXD2A 185814 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 112051912 112052490 112052119 Y ADD3,MXI1 SMNDC1 NA NA NA NA SMNDC1 10219 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 116161021 116161267 116161255 Y NA AFAP1L2 NA NA NA NA AFAP1L2 1248 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr10 124254349 124254758 124254614 Y NA HTRA1 NA NA NA NA HTRA1 35308 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr11 1357863 1358286 1357997 Y TOLLIP,BRSK2 TOLLIP TOLLIP,LOC255512 K562 ChIA-PET 22265404 TOLLIP 28979 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 1870283 1870513 1870420 Y CTSD,MOB2 NA NA NA NA NA CTSD 87061 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 8166799 8166849 8166831 Y NA NA NA NA NA NA EIF3F 177001 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 8857868 8857938 8857900 Y NA NA NA NA NA NA ST5 72560 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 9587499 9588027 9587720 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1 ZNF143,LOC644656 MCF7,K562 ChIA-PET 22265404 WEE1 5201 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr11 9590279 9590748 9590469 Y WEE1,WEE1 WEE1 LOC644656,ZNF143 K562,MCF7 ChIA-PET 22265404 WEE1 2480 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 9639557 9639822 9639717 Y WEE1 WEE1,SWAP70 LOC283104,LOC440028,SBF2,SWAP70,ZNF143 IMR90 Hi-C 24141950 SWAP70 43802 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 9786985 9787566 9787311 Y NA SBF2-AS1 NA NA NA NA SBF2-AS1 9146 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 10003812 10004242 10004040 Y ADM NA NA NA NA NA SBF2-AS1 225973 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 10348834 10349113 10348969 Y NA SBF2,ADM NA NA NA NA ADM 24607 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 10549004 10549441 10549205 Y AMPD3,AMPD3,MRVI1,MRVI1,RNF141 RNF141,MRVI1-AS1 NA NA NA NA RNF141 11336 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 12181262 12181458 12181363 Y MICALCL,MICAL2 NA MICALCL IMR90 Hi-C 24141950 MICAL2 67719 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 12204570 12205016 12204699 Y MICAL2 NA NA NA NA NA MICAL2 91027 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 19957110 19957424 19957380 Y NAV2 NA NA NA NA NA PRMT3 449652 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 28701449 28701661 28701530 Y NA RP11-115J23.1 BDNF,BDNF-AS1 IMR90 Hi-C 24141950 RP11-115J23.1 20501 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr11 33568178 33568383 33568283 Y NA NA NA NA NA NA CD59 187608 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 35103874 35105511 35104330 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 52906 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 35249361 35250020 35249669 Y CD44 NA NA NA NA NA CD44 90944 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 48034964 48035405 48035033 Y OR4X1,CELF1,CELF1,FNBP4,PTPRJ PTPRJ NA NA NA NA PTPRJ 34851 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 62310227 62311393 62310863 Y WDR74,UBXN1,STX5,SLC3A2,NXF1,EML3,AHNAK AHNAK,EEF1G,MIR3654,TUT1 NA NA NA NA AHNAK 10314 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 65185589 65187086 65186338 Y NA FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 1159 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 65187297 65188198 65187553 Y BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 47 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 65257502 65257849 65257676 Y NA AP000769.1,MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 5384 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 65264635 65265953 65265057 Y NA AP000769.1,MALAT1,SCYL1 NA NA NA NA MALAT1 1402 CAGE HIRS-BM hg19 FANTOM5 23.8532854125722 chr11 65683105 65683625 65683322 Y NA EFEMP2,CTSW,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1 NA NA NA NA C11orf68 963 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr11 65782974 65783337 65783107 Y FOSL1 BANF1,EIF1AD,CST6,CATSPER1,SF3B2 NA NA NA NA CST6 5662 CAGE HIRS-BM hg19 FANTOM5 7.53261644607544 chr11 74465903 74466299 74466070 Y POLD3,RNF169 RNF169 XRRA1 IMR90 Hi-C 24141950 RNF169 7990 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 76802149 76802401 76802277 Y NA CAPN5 NA NA NA NA CAPN5 26170 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 85047149 85047448 85047300 Y NA NA NA NA NA NA TMEM126B 290181 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 86430919 86431170 86431045 Y PRSS23 ME3 PRSS23,ME3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ME3 49241 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 86514557 86514754 86514624 Y NA PRSS23 NA NA NA NA PRSS23 14456 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 92807675 92808032 92807855 Y NA NA MTNR1B IMR90 Hi-C 24141950 SLC36A4 121098 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 102631066 102631384 102631342 Y BIRC2 MMP1 NA NA NA NA MMP1 35507 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 118793665 118793922 118793750 Y MLL,DDX6,VPS11,RPS25,CCDC84 BCL9L NA NA NA NA BCL9L 395 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr11 119454963 119455433 119455083 Y NA NA TRIM29,USP2,LOC100499227 IMR90 Hi-C 24141950 PVRL1 142361 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr11 124403880 124404281 124404167 Y NA NA NA NA NA NA TBRG1 86451 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 7592182 7592797 7592685 Y PEX5,NANOG RP11-157G21.2,CD163L1 NA NA NA NA RP11-157G21.2 1596 CAGE HIRS-BM hg19 FANTOM5 16.3206689664968 chr12 7858113 7858526 7858208 Y NA NA NA NA NA NA CD163L1 227620 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 10869298 10869573 10869459 Y NA NA NA NA NA NA MAGOHB 105076 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 11908291 11908514 11908403 Y BCL2L14,ETV6 NA NA NA NA NA ETV6 107503 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 12009987 12010279 12010170 Y ETV6,BCL2L14 NA NA NA NA NA ETV6 209199 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 13025126 13025347 13025203 Y NA GPRC5A NA NA NA NA GPRC5A 16369 CAGE HIRS-BM hg19 FANTOM5 6.27718037172953 chr12 15105208 15105676 15105381 Y WBP11,ARHGDIB ARHGDIB NA NA NA NA ARHGDIB 6986 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 20099675 20099840 20099742 Y PDE3A NA LOC100506393,PDE3A IMR90 Hi-C 24141950 PDE3A 420339 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 20124309 20124606 20124452 Y PDE3A NA PDE3A IMR90 Hi-C 24141950 PDE3A 395573 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 24993015 24993329 24993020 Y NA NA NA NA NA NA BCAT1 107064 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 29317763 29317994 29317897 Y NA FAR2 NA NA NA NA FAR2 17727 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 29903685 29903894 29903854 Y NA TMTC1 NA NA NA NA TMTC1 31798 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 46888080 46888552 46888358 Y NA NA SLC38A2,SLC38A4,SLC38A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP11-96H19.1 112618 CAGE HIRS-BM hg19 FANTOM5 6.27718037172953 chr12 46917975 46918280 46918143 Y NA NA SLC38A2,SLC38A4,SLC38A1,AMIGO2 IMR90 Hi-C 24141950 RP11-96H19.1 142513 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 49739970 49740063 49739997 Y NA TROAP,SPATS2 NA NA NA NA SPATS2 18304 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 52596076 52596423 52596243 Y NA KRT86 NA NA NA NA KRT86 44661 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 52674043 52674518 52674247 Y NR4A1,C12orf44,KRT84,KRT6A,KRT5,KRT80 KRT86 NA NA NA NA KRT86 32959 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 54941805 54942012 54941941 Y PDE1B NA NA NA NA NA NCKAP1L 52310 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 57028610 57029302 57028864 Y NA BAZ2A,ATP5B NA NA NA NA BAZ2A 10 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr12 59061940 59062339 59062197 Y NA NA NA NA NA NA LRIG3 249964 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 68761672 68762016 68761874 Y IFNG,RAP1B MDM1 RAP1B,NUP107,LOC100507250 IMR90 Hi-C 24141950 MDM1 37511 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 68932536 68932735 68932704 Y NA NA MDM1 IMR90 Hi-C 24141950 RAP1B 69884 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 69036661 69037118 69036873 Y NA RAP1B,RP11-254B13.3,NUP107 NA NA NA NA RP11-254B13.3 1888 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 79803401 79803717 79803562 Y NA NA NA NA NA NA PAWR 279160 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 80974115 80974384 80974233 Y MYF5 NA NA NA NA NA PTPRQ 176341 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr12 109227089 109227462 109227320 Y NA SSH1 NA NA NA NA SSH1 21904 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 112018937 112019235 112019073 Y NA ATXN2 NA NA NA NA ATXN2 16245 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 116893494 116893818 116893640 Y MED13L,MAP1LC3B2 NA MED13L,LINC00173,MAP1LC3B2,MIR4472-2,C12orf49 IMR90 Hi-C 24141950 MED13L 180351 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 124907545 124908050 124907792 Y NA NA NA NA NA NA NCOR2 142085 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 124926476 124926613 124926576 Y NA NA NA NA NA NA NCOR2 123522 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 125050856 125051375 125051213 Y UBC,NCOR2 NCOR2 NA NA NA NA NCOR2 721 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr12 132368164 132368433 132368235 Y NA ULK1,PUS1 SFSWAP,ULK1,EP400,PUS1 IMR90 Hi-C 24141950 ULK1 8763 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 22243438 22243610 22243458 Y FGF9 RPS7P10 NA NA NA NA FGF9 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 24148254 24148621 24148289 Y SGCG,TNFRSF19 TNFRSF19 NA NA NA NA TNFRSF19 5745 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 40743001 40743331 40743166 Y NA NA LINC00548 IMR90 Hi-C 24141950 FOXO1 495403 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 41560539 41560879 41560717 Y NA NA NA NA NA NA SUGT1P3 66629 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 49569007 49569270 49569139 Y NA FNDC3A NA NA NA NA FNDC3A 20959 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 52922324 52922434 52922379 Y THSD1 NA THSD1 IMR90 Hi-C 24141950 VPS36 100329 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 57309762 57309863 57309815 Y NA NA NA NA NA NA DIAPH3 3426258 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 76269053 76269192 76269124 Y NA NA NA NA NA NA LMO7 76483 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 77899332 77899971 77899636 Y KCTD12,FBXL3,MYCBP2 MYCBP2 NA NA NA NA MYCBP2 147 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 95201580 95202169 95201893 Y NA TGDS,GPR180 NA NA NA NA TGDS 44342 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 99880215 99880463 99880360 Y GPR183 UBAC2-AS1,UBAC2 NA NA NA NA UBAC2 29187 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 111061947 111062361 111062286 Y NA NA NA NA NA NA COL4A1 104451 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 111124207 111124408 111124318 Y RAB20,ING1,ING1,ANKRD10 NA NA NA NA NA CARKD 141473 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr13 111881085 111881388 111881198 Y NA NA NA NA NA NA ARHGEF7 116179 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 24075347 24075692 24075500 Y NA NA C14orf167 IMR90 Hi-C 24141950 ZFHX2 51946 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 33171876 33172196 33172044 Y AKAP6,NPAS3 NA NA NA NA NA ARHGAP5-AS1 627877 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 34529400 34529785 34529476 Y EGLN3 NA EGLN3 K562,MCF7 ChIA-PET 22265404 SPTSSA 399777 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 49375724 49376075 49375898 Y NA NA NA NA NA NA RN7SL1 675222 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 50213261 50213687 50213459 Y NA KLHDC2 NA NA NA NA KLHDC2 18639 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 50329576 50329987 50329651 Y NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 11655 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 50334846 50335244 50334992 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 16925 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 52372298 52373220 52372436 Y PTGER2,GNG2 NA NA NA NA NA C14orf166 80973 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr14 57953486 57953857 57953604 Y C14orf105 C14orf105 NA NA NA NA C14orf105 4728 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 59656513 59656908 59656842 Y DAAM1 DAAM1 NA NA NA NA DAAM1 3149 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 60074995 60075284 60075140 Y NA NA NA NA NA NA JKAMP 125834 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 60166051 60166469 60166339 Y NA NA NA NA NA NA RTN1 169215 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 65637410 65637773 65637587 Y NA NA LOC645431,FUT8,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 69997 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 68607037 68607479 68607161 Y NA NA NA NA NA NA RAD51B 322541 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 68831089 68831428 68831316 Y NA NA NA NA NA NA ZFP36L1 429762 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 81685513 81686063 81685724 Y GTF2A1,GTF2A1 NA NA NA NA NA GTF2A1 0 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr14 85881762 85881957 85881956 Y FLRT2 NA NA NA NA NA FLRT2 112531 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 86108473 86108655 86108564 Y NA NA NA NA NA NA FLRT2 113985 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 92451454 92451633 92451538 Y SMEK1,SLC24A4,SLC24A4,ATXN3 FBLN5 NA NA NA NA FBLN5 39123 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 102414226 102414964 102414565 Y NA DYNC1H1 NA NA NA NA DYNC1H1 13901 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 105760670 105760918 105760811 Y C14orf80,C14orf80,C14orf80,GPR132,BRF1 BTBD6,PACS2,BRF1 NA NA NA NA PACS2 3982 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr14 105947921 105948133 105948082 Y NA CRIP2,C14orf80 NA NA NA NA C14orf80 6059 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr14 105948139 105949025 105948432 Y NA CRIP2,C14orf80 NA NA NA NA C14orf80 5167 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr15 25018281 25018456 25018384 Y SNURF,SNRPN,SNRPN,SNRPN SNRPN NA NA NA NA SNRPN 48338 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 26854717 26854952 26854835 Y NA NA NA NA NA NA ATP10A 746400 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 33122479 33122828 33122652 Y GREM1 NA NA NA NA NA GREM1 114304 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 38828822 38829084 38828901 Y RASGRP1 RASGRP1 NA NA NA NA RASGRP1 26692 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 39115428 39115847 39115527 Y C15orf54 NA THBS1,FSIP1,C15orf53 IMR90 Hi-C 24141950 RASGRP1 259652 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 39432449 39432903 39432696 Y C15orf54 NA THBS1,C15orf53,FSIP1,RASGRP1 IMR90 Hi-C 24141950 THBS1 438377 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 42786035 42786158 42786098 Y SNAP23 SNAP23 NA NA NA NA SNAP23 4604 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 45004703 45005017 45004887 Y CASC4,CTDSPL2,SPG11,PATL2,B2M,TRIM69 PATL2,B2M,TRIM69 NA NA NA NA B2M 3028 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 45784407 45784611 45784453 Y C15orf48,SQRDL,PLDN SLC30A4 NA NA NA NA SLC30A4 28394 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 48884454 48884907 48884660 Y NA NA NA NA NA NA FBN1 51139 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 48963656 48963859 48963732 Y FBN1 FBN1 SHC4,FBN1,CEP152 IMR90 Hi-C 24141950 FBN1 27610 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 50876708 50877085 50876843 Y NA NA NA NA NA NA TRPM7 99927 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 50995097 50995499 50995351 Y SPPL2A TRPM7 NA NA NA NA TRPM7 18085 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 58761932 58762090 58762054 Y NA NA ADAM10 IMR90 Hi-C 24141950 ADAM10 278087 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 59023904 59024166 59024035 Y RNF111 ADAM10,FAM63B NA NA NA NA ADAM10 16011 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 64134183 64134518 64134297 Y USP3,HERC1 HERC1 HERC1,DAPK2,FAM96A,SNX1 IMR90 Hi-C 24141950 HERC1 10042 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 66162838 66163256 66163114 Y NA NA NA NA NA NA DENND4A 80207 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 67359902 67360303 67360058 Y NA SMAD3 NA NA NA NA SMAD3 5801 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 67426476 67426864 67426547 Y SMAD3 NA NA NA NA NA SMAD3 72375 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 68589122 68589626 68589166 Y ITGA11 CLN6,FEM1B NA NA NA NA FEM1B 20981 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 72041767 72041974 72041871 Y SENP8 NA NA NA NA NA SENP8 362625 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 74223574 74223817 74223712 Y LOXL1 LOXL1 NA NA NA NA LOXL1 7244 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 74332904 74333192 74333031 Y NA STOML1,PML NA NA NA NA PML 47890 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 74343707 74344076 74343754 Y NA NA NA NA NA NA PML 58693 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr15 75250602 75250974 75250783 Y RPP25 COX5A,RPP25 NA NA NA NA RPP25 2797 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 75959061 75959441 75959310 Y SNX33 SNUPN,SNX33,IMP3,CSPG4 NA NA NA NA IMP3 20014 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 77710600 77710857 77710802 Y NA PEAK1 NA NA NA NA HMG20A 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 83777211 83777631 83777545 Y NA BTBD1,TM6SF1 NA NA NA NA TM6SF1 3052 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr15 86211201 86211615 86211423 Y AKAP13,KLHL25 NA NA NA NA NA KLHL25 124646 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 90669829 90670140 90669985 Y NA IDH2,SEMA4B IQGAP1,IDH2,MESP1,SEMA4B,C15orf58,CIB1,NGRN,TTLL13,ZNF710,C15orf38-AP3S2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IDH2 26093 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 93344993 93345488 93345070 Y CHD2 FAM174B NA NA NA NA FAM174B 5626 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr15 93363497 93364154 93363735 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 FAM174B ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 FAM174B 12383 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 93374780 93375598 93375185 Y NA FAM174B,CHD2 CHD2,LOC100507217,ASB9P1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 FAM174B 23666 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 97129304 97129480 97129390 Y NA NA NR2F2 MCF7 ChIA-PET 22265404 RP11-522B15.3 233838 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 99193577 99194531 99194069 Y IGF1R IGF1R NA NA NA NA IGF1R 3377 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr15 99383120 99383528 99383461 Y NA NA NA NA NA NA IGF1R 192920 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr15 102202329 102202647 102202484 Y OR4F15 TM2D3 NA NA NA NA TM2D3 11735 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 729341 729555 729445 Y NA C16orf13,FAM195A,AL022341.3,WDR90,RHOT2,STUB1,JMJD8,WDR24,METRN,FAM173A NA NA NA NA STUB1 1117 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 3414643 3415237 3414919 Y NA ZNF174 NA NA NA NA ZNF174 33998 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 3996199 3996445 3996330 Y NA NA NA NA NA NA CREBBP 67472 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 4343991 4344084 4344046 Y NA NA CREBBP,ADCY9,SRL,VASN,GLIS2,PAM16,CORO7-PAM16,TRAP1,TFAP4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PAM16 59524 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 4420946 4421237 4421026 Y NA PAM16,VASN NA NA NA NA VASN 1097 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 4422682 4422871 4422704 Y NA PAM16,VASN NA NA NA NA VASN 2833 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 10596760 10596940 10596850 Y EMP2 NA NA NA NA NA EMP2 75615 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 11591931 11591962 11591945 Y NA NA SNN,TXNDC11,CLEC16A,LITAF IMR90 Hi-C 24141950 LITAF 136275 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 15684514 15685137 15684868 Y NDE1,NDE1,KIAA0430 KIAA0430,NDE1 NA NA NA NA KIAA0430 49886 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 22202596 22202946 22202679 Y POLR3E,CDR2 EEF2K UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 12657 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 27254406 27254878 27254778 Y IL4R NSMCE1 NA NA NA NA NSMCE1 23237 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 30645556 30645885 30645776 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF689,PRR14 PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF689 12223 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr16 46823783 46824029 46823881 Y NA C16orf87 NA NA NA NA C16orf87 39294 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 51186041 51186738 51186313 Y NA SALL1 NA NA NA NA SALL1 2763 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 56644047 56644457 56644379 Y NLRC5,HERPUD1 MT2A,MT1E,MT1A,MT1F NA NA NA NA MT2A 3936 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 64944348 64944657 64944578 Y NA NA NA NA NA NA CDH11 213358 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr16 67993555 67993691 67993621 Y NA PSMB10,SLC12A4 NA NA NA NA SLC12A4 7813 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr16 68271348 68271876 68271591 Y TSNAXIP1,SLC12A4,ESRP2 PLA2G15,SLC7A6 NA NA NA NA PLA2G15 5331 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 73461043 73461303 73461173 Y NA NA NA NA NA NA ZFHX3 369446 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 75278988 75279894 75279594 Y CHST6,FA2H,BCAR1,BCAR1,BCAR1,BCAR1,BCAR1 BCAR1 NA NA NA NA BCAR1 20057 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 82686651 82686853 82686732 Y NA CDH13 HSBP1 IMR90 Hi-C 24141950 CDH13 28243 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 85202555 85203049 85202710 Y NA NA NA NA NA NA KIAA0513 143180 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr16 86664163 86664323 86664252 Y NA NA FOXL1,C16orf95 IMR90 Hi-C 24141950 FOXC2 65306 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 86775121 86775409 86775225 Y NA NA FOXC2,FOXL1 IMR90 Hi-C 24141950 FOXC2 176264 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr16 86985410 86985767 86985608 Y FOXC2,FOXL1 NA FOXL1,FOXC2,MTHFSD,FLJ30679,C16orf95 IMR90 Hi-C 24141950 FOXC2 386553 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr16 87812654 87813065 87812978 Y NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 15056 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr16 89323118 89323579 89323381 Y NA ZNF778 NA NA NA NA ZNF778 41000 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 1974774 1975359 1974921 Y SCARF1,HIC1,HIC1 DPH1,OVCA2,HIC1 NA NA NA NA HIC1 19326 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 2300026 2300553 2300288 Y RAP1GAP2,PAFAH1B1,MNT MNT NA NA NA NA MNT 1859 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 4205148 4205753 4205440 Y P2RX1,ATP2A3,ZZEF1,ZMYND15,ZMYND15,SMTNL2,SMTNL2,ARRB2,UBE2G1 ANKFY1 NA NA NA NA ANKFY1 39874 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 4934963 4935218 4935186 Y NA CAMTA2,INCA1,KIF1C,ZFP3 NA NA NA NA KIF1C 35720 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 7745337 7745870 7745591 Y NA CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 13194 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 7746991 7747556 7747325 Y POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 11508 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 8103328 8103700 8103595 Y NA PER1,VAMP2,SNORD118,TMEM107,AURKB,PFAS,CTC1 NA NA NA NA AURKB 8218 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 15313128 15313509 15313354 Y NA NA NA NA NA NA CDRT1 207317 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 21189600 21190105 21189864 Y MAP2K3,MAP2K3 C17orf103,MAP2K3 NA NA NA NA MAP2K3 3616 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 25981784 25982180 25981982 Y NA LGALS9 NA NA NA NA LGALS9 26960 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 26137338 26137696 26137407 Y LGALS9 NA NOS2 IMR90 Hi-C 24141950 LGALS9 182514 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 28928053 28928382 28928251 Y NA SMURF2P1 NA NA NA NA SMURF2P1 2239 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr17 35288156 35288415 35288296 Y LHX1 AATF AATF K562 ChIA-PET 22265404 AATF 15760 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 36585417 36585600 36585486 Y ARHGAP23 ARHGAP23 NA NA NA NA ARHGAP23 2755 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 37366071 37366159 37366135 Y STAC2 CACNB1,RPL19,STAC2 NA NA NA NA RPL19 11535 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 42276572 42276897 42276785 Y TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3 TMUB2,ATXN7L3,UBTF NA NA NA NA ATXN7L3 1091 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr17 47928830 47928921 47928887 Y FAM117A NA NA NA NA NA FAM117A 64288 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 48139711 48140314 48140012 Y XYLT2,LRRC59,EPN3,ITGA3 ITGA3,PDK2 NA NA NA NA ITGA3 8379 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 48282931 48283079 48283012 Y COL1A1,TMEM92 SGCA,COL1A1 SGCA,HILS1 IMR90 Hi-C 24141950 COL1A1 5938 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 48288364 48288588 48288396 Y XYLT2,LRRC59,COL1A1 SGCA,COL1A1 PDK2,ITGA3,COL1A1,PPP1R9B,SGCA,HILS1,TMEM92,XYLT2 IMR90 Hi-C 24141950 COL1A1 11371 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 48716257 48716537 48716480 Y NA ABCC3 NA NA NA NA ABCC3 6119 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 49008376 49008926 49008868 Y NA NA WFIKKN2,TOB1,LOC400604,LINC00483,ANKRD40,SPAG9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 65037 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 55970352 55970806 55970481 Y SUPT4H1,VEZF1 MRPS23 NA NA NA NA MRPS23 44935 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 57502934 57503327 57503130 Y YPEL2 NA YPEL2 IMR90 Hi-C 24141950 YPEL2 95884 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 57906379 57907270 57906882 Y RNFT1 NA NA NA NA NA RPS6KB1 61177 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 59449966 59450070 59450027 Y NA TBX2 NA NA NA NA TBX2 25187 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 62196117 62196293 62196169 Y NA ERN1,SNORD104 ICAM2 IMR90 Hi-C 24141950 ERN1 9886 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 64981602 64981762 64981682 Y NA CACNG4 NA NA NA NA CACNG4 22576 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 66016045 66016315 66016119 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 13320 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 75429541 75429800 75429625 Y NA NA NA NA NA NA SEPT9 154890 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 75954393 75954796 75954614 Y NA NA TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TMC6 171692 CAGE HIRS-BM hg19 FANTOM5 25.1087214869181 chr17 78500391 78500494 78500444 Y NA RPTOR RPTOR,NPTX1,LOC100294362,ENDOV IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPTOR 16125 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 79360408 79361324 79361141 Y ARHGDIA,ARHGDIA,TSPAN10 NA NA NA NA NA SLC38A10 93061 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr17 79397073 79397461 79397298 Y MAFG,MAFG,NPLOC4,HGS NA NA NA NA NA RP13-766D20.1 80628 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr17 81150899 81151424 81151082 Y METRNL NA METRNL MCF7 ChIA-PET 22265404 METRNL 115332 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr18 667633 668016 667981 Y THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1 TYMS,ENOSF1 NA NA NA NA TYMS 12029 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 2605641 2605936 2605854 Y NA METTL4,NDC80,SMCHD1 NA NA NA NA NDC80 36131 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 12808880 12809062 12808971 Y NA NA NA NA NA NA CEP76 108104 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 21417655 21417852 21417722 Y NPC1,LAMA3 NA NA NA NA NA TTC39C 152885 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr18 22813301 22813647 22813474 Y NA NA NA NA NA NA ZNF521 116507 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 29354326 29354665 29354429 Y NA NA NA NA NA NA TRAPPC8 176434 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 32622568 32623026 32622758 Y ZNF24,MAPRE2 NA NA NA NA NA MAPRE2 67676 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 33040584 33040905 33040747 Y NA INO80C NA NA NA NA INO80C 35050 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 33093148 33093751 33093628 Y GALNT1 INO80C NA NA NA NA INO80C 17193 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 33311016 33311295 33311162 Y NA NA NA NA NA NA GALNT1 151935 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 42295257 42295574 42295401 Y SETBP1,SETBP1 SETBP1 NA NA NA NA SETBP1 37119 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 43351602 43351892 43351629 Y SLC14A1 SLC14A1 NA NA NA NA SLC14A1 49510 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr18 43381768 43381900 43381886 Y NA SIGLEC15 EPG5,SLC14A2,SLC14A1,SIGLEC15 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SIGLEC15 21577 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr18 46066779 46067121 46067052 Y CTIF CTIF NA NA NA NA CTIF 3362 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 46455103 46455621 46455353 Y SMAD7,SMAD7 NA NA NA NA NA CTIF 391686 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 46465508 46465942 46465798 Y SMAD7,SMAD7,SMAD7 NA NA NA NA NA CTIF 402091 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 55448232 55448442 55448350 Y NA ATP8B1 NA NA NA NA ATP8B1 19891 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 60173605 60173906 60173662 Y KIAA1468,ZCCHC2 ZCCHC2 ZCCHC2 MCF7 ChIA-PET 22265404 ZCCHC2 14334 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 60189219 60189514 60189362 Y TNFRSF11A,ZCCHC2 ZCCHC2 NA NA NA NA ZCCHC2 979 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr18 60880346 60881040 60880460 Y SERPINB12,BCL2 NA NA NA NA NA KDSR 151703 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 1266359 1266798 1266589 Y NA C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1 NA NA NA NA C19orf24 6228 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 3405079 3405252 3405203 Y NA NFIC NA NA NA NA NFIC 47518 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 4456385 4456784 4456737 Y UBXN6,UBXN6 UBXN6,HDGFRP2 NA NA NA NA UBXN6 566 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr19 6066698 6067208 6066827 Y SLC25A41,TMEM146,PRR22,DUS3L,RFX2,ACSBG2 NA NA NA NA NA RANBP3 90545 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 6108978 6109271 6109224 Y NA NA NA NA NA NA RFX2 88312 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 6539979 6540238 6540076 Y NA TNFSF9 NA NA NA NA TNFSF9 10969 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 10515339 10515636 10515481 Y PDE4A,PDE4A TYK2,MIR1181 NA NA NA NA MIR1181 3125 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 12888910 12889352 12889266 Y NA C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 10958 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr19 12899457 12901460 12900777 Y NA PRDX2,RNASEH2A NA NA NA NA JUNB 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 13262107 13262928 13262695 Y MAN2B1,C19orf43,JUNB TRMT1,NACC1,STX10,IER2 NA NA NA NA IER2 2878 CAGE HIRS-BM hg19 FANTOM5 6.27718037172953 chr19 13267779 13268208 13267877 Y MAN2B1,JUNB TRMT1,NACC1,STX10,IER2 NA NA NA NA IER2 8550 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 13278382 13278991 13278445 Y BEST2,JUNB,LYL1,STX10 STX10,IER2 NA NA NA NA IER2 19153 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 13954357 13954714 13954441 Y NA NA NA NA NA NA ZSWIM4 50083 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 13972364 13973309 13972780 Y CCDC130,RFX1,PRKACA,IL27RA,DCAF15,ZSWIM4 CC2D1A NA NA NA NA CC2D1A 41705 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 14732511 14733275 14733016 Y SYDE1 NA NA NA NA NA NDUFB7 51637 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 16188924 16190024 16189835 Y TPM4 TPM4,RAB8A NA NA NA NA TPM4 13093 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr19 16394356 16394632 16394513 Y NWD1,KLF2 KLF2 EPS15L1 IMR90 Hi-C 24141950 KLF2 38996 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 17201349 17201870 17201496 Y HAUS8,MYO9B HAUS8,MYO9B NA NA NA NA MYO9B 16758 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 18527701 18528040 18527800 Y KCNN1,ARRDC2,ARRDC2,IL12RB1,IFI30,JUND,PGPEP1,LRRC25,SSBP4 GDF15,SSBP4,ISYNA1 NA NA NA NA SSBP4 27 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 18768622 18768973 18768794 Y KIAA1683 KLHL26,CRTC1 NA NA NA NA KLHL26 22847 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 19488658 19488936 19488750 Y NA GATAD2A NA NA NA NA GATAD2A 5699 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 19600012 19600395 19600260 Y RFXANK,MAU2,GATAD2A,PBX4,GMIP NDUFA13,YJEFN3 NA NA NA NA NDUFA13 24150 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 30336581 30336824 30336781 Y C19orf2,C19orf2 CCNE1 NA NA NA NA CCNE1 35776 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 34625713 34625998 34625854 Y PDCD2L LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 35411 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 34850085 34850642 34850351 Y ZNF599,ZNF302,ZNF181 GPI,PDCD2L NA NA NA NA GPI 1700 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 36180825 36181220 36181023 Y MAG,ZBTB32 COX6B1 NA NA NA NA COX6B1 43700 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 36618643 36619171 36618835 Y NA TBCB,POLR2I,CAPNS1,COX7A1 NA NA NA NA CAPNS1 9306 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 37795242 37795359 37795301 Y ZNF790,ZNF345,ZNF345,ZNF345,ZNF829,ZNF568,ZNF420,ZNF585B,ZNF793,ZNF781,ZNF607,ZNF607,ZNF573,ZNF570,ZNF569,ZNF540,ZNF527,HKR1 HKR1 NA NA NA NA HKR1 6380 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr19 39148533 39148920 39148613 Y C19orf33,FAM98C,PAPL,ACTN4 EIF3K,ACTN4 NA NA NA NA ACTN4 12244 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 39149253 39149575 39149354 Y SPINT2,C19orf33,PAK4,ACTN4 EIF3K,ACTN4 NA NA NA NA ACTN4 12964 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 39863077 39863463 39863179 Y NA GMFG,SAMD4B,PAF1,MED29,ZFP36,MIR4530,PLEKHG2 NA NA NA NA PAF1 16372 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 40441593 40441941 40441767 Y NA CTC-471F3.4,PSMC4,ZNF546 NA NA NA NA CTC-471F3.4 5693 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 41795419 41795640 41795447 Y CYP2A13,B9D2,HNRNPUL1 HNRNPUL1,CCDC97 NA NA NA NA CCDC97 18454 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 42037922 42038313 42037990 Y CCDC97,TGFB1,B9D2,TMEM91,CEACAM4,CEACAM21,ARHGEF1 NA LOC100505495 IMR90 Hi-C 24141950 ATP5SL 93300 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 42606774 42607144 42606983 Y NA ZNF574 NA NA NA NA ZNF574 36145 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 42772295 42772768 42772477 Y NA ZNF526,GSK3A,ERF,CIC,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 CIC 1606 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr19 42784527 42784991 42784716 Y ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8 GSK3A,ERF,CIC,PAFAH1B3,MEGF8 NA NA NA NA CIC 13838 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 45129392 45129792 45129578 Y PVRL2,GEMIN7,GEMIN7,PVR PVR NA NA NA NA PVR 15306 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 45953764 45954783 45954182 Y NA CD3EAP,FOSB,ERCC1,RTN2 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 14470 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr19 46683956 46684315 46684191 Y NA NA NA NA NA NA PPP5C 163936 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr19 47448240 47448462 47448420 Y PNMAL1,PNMAL2,DACT3,ARHGAP35,MEIS3,NPAS1 NA NA NA NA NA NPAS1 72615 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr19 47746329 47746738 47746506 Y SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24 BBC3,CCDC9,PRR24 NA NA NA NA CCDC9 10499 CAGE HIRS-BM hg19 FANTOM5 6.27718037172953 chr19 48103581 48103982 48103689 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 NA GLTSCR1,NAPA MCF7 ChIA-PET 22265404 NAPA 87084 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 49495555 49495708 49495609 Y SPHK2,SPHK2,BCAT2,NUCB1,TRPM4 BAX,FTL,GYS1,RUVBL2 NA NA NA NA RUVBL2 850 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 51287900 51288107 51288100 Y NA C19orf48 NA NA NA NA C19orf48 18079 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 52192085 52192767 52192400 Y ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577 NA NA NA NA NA ZNF577 199436 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr19 52229316 52229816 52229631 Y HAS1 NA NA NA NA NA ZNF577 162387 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 55977615 55977883 55977735 Y NLRP8,NLRP9,NLRP11,SGK110 ISOC2,ZNF628,NAT14,SSC5D ISOC2,UBE2S,SSC5D,NAT14 MCF7,K562 ChIA-PET 22265404 ISOC2 5905 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr19 57349423 57349757 57349684 Y ZNF543,ZNF583,ZNF583,ZNF583,ZNF667,ZNF471,ZNF470,ZNF71,LOC147670,ZNF835,ZIM2,PEG3 PEG3,ZIM2 NA NA NA NA PEG3 339 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 1725053 1725311 1725239 Y NA PXDN NA NA NA NA PXDN 21313 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 9411571 9411694 9411610 Y ADAM17 NA NA NA NA NA ASAP2 66677 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 11547236 11547448 11547321 Y NA NA ROCK2,PQLC3,C2orf50 IMR90 Hi-C 24141950 E2F6 56849 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 12856062 12856442 12856137 Y NA TRIB2 NA NA NA NA TRIB2 1047 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 17824489 17824666 17824658 Y NA NA NA NA NA NA VSNL1 106096 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 18249281 18249546 18249363 Y NA NA KCNS3 IMR90 Hi-C 24141950 KCNS3 192167 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 24852047 24852369 24852206 Y NA NA NA NA NA NA PTRHD1 161882 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 36882679 36883018 36882845 Y NA FEZ2 LOC100288911,CRIM1,FEZ2,VIT IMR90 Hi-C 24141950 FEZ2 11449 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 37789550 37789826 37789587 Y EIF2AK2,CDC42EP3 NA CDC42EP3,QPCT IMR90 Hi-C 24141950 CDC42EP3 173785 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 37852383 37852553 37852466 Y EIF2AK2,EIF2AK2,QPCT,CYP1B1,CDC42EP3 NA NA NA NA NA CDC42EP3 111058 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 42278314 42278459 42278342 Y NA PKDCC NA NA NA NA PKDCC 5154 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 46797577 46797967 46797772 Y NA RHOQ,ATP6V1E2,CRIPT,PIGF NA NA NA NA ATP6V1E2 29881 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 47027530 47027861 47027840 Y NA NA LOC388948,SOCS5,CRIPT,LOC100134259,MCFD2,TTC7A IMR90 Hi-C 24141950 SOCS5 103439 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 54019039 54019374 54019207 Y ACYP2,ASB3,ASB3,GPR75 CHAC2,ERLEC1 NA NA NA NA ERLEC1 6858 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 54022416 54022710 54022562 Y NA CHAC2,ERLEC1 NA NA NA NA ERLEC1 10235 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 54971761 54972012 54971777 Y NA NA NA NA NA NA SPTBN1 290339 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 61991278 61991660 61991557 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM161A 87618 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 67625110 67625487 67625291 Y ETAA1 ETAA1 NA NA NA NA ETAA1 2659 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr2 70294861 70295138 70295000 Y NA PCBP1,PCBP1-AS1 NA NA NA NA PCBP1 17447 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 85982713 85983043 85983025 Y NA ATOH8 NA NA NA NA ATOH8 6246 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 97428705 97428844 97428785 Y NA LMAN2L,CNNM4 NA NA NA NA CNNM4 4066 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 109789769 109790041 109789880 Y NA SH3RF3 NA NA NA NA SH3RF3 45965 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 129381655 129381863 129381711 Y NA NA UGGT1,HS6ST1 IMR90 Hi-C 24141950 HS6ST1 307504 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 145795788 145796304 145796070 Y NA NA NA NA NA NA TEX41 372254 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 145942500 145942836 145942668 Y NA NA ZEB2 IMR90 Hi-C 24141950 TEX41 518966 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 153362104 153362315 153362141 Y FMNL2 NA NA NA NA NA ARL6IP6 210092 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 157190328 157191531 157191235 Y GPD2,NR4A2 NR4A2 GPD2 IMR90 Hi-C 24141950 NR4A2 5329 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 160100045 160100277 160100255 Y NA WDSUB1 NA NA NA NA WDSUB1 41033 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 162197345 162197490 162197464 Y NA PSMD14,AC009299.5 NA NA NA NA AC009299.5 1508 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 170684911 170685465 170685124 Y PPIG,C2orf77,PHOSPHO2,UBR3 SSB,METTL5,UBR3 NA NA NA NA UBR3 2943 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 174007383 174007707 174007544 Y ZAK NA NA NA NA NA CDCA7 209841 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 176866139 176866392 176866261 Y KIAA1715 KIAA1715 NA NA NA NA KIAA1715 572 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 183927847 183928122 183927946 Y DUSP19 NCKAP1,DUSP19 NA NA NA NA DUSP19 13165 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 190043432 190043827 190043588 Y DIRC1,COL3A1,COL5A2 COL5A2 NA NA NA NA COL5A2 827 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr2 191443312 191443866 191443668 Y NA TMEM194B TMEM194B MCF7 ChIA-PET 22265404 TMEM194B 45864 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr2 192112527 192112680 192112632 Y NA MYO1B NA NA NA NA MYO1B 4616 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 197264939 197265165 197265058 Y STK17B NA NA NA NA NA HECW2 191251 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 202898182 202898685 202898353 Y TMEM237,FZD7 NA NA NA NA NA PSMA2P3 143335 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 204315265 204315638 204315451 Y NA NA NA NA NA NA RAPH1 82495 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 204550155 204550270 204550210 Y NA NA RAPH1,CD28 IMR90 Hi-C 24141950 RAPH1 152022 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 204676480 204676691 204676598 Y NA NA RAPH1,CD28,NBEAL1,CYP20A1 IMR90 Hi-C 24141950 RAPH1 278347 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 208027980 208028625 208028335 Y CREB1,KLF7 KLF7 NA NA NA NA KLF7 1366 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 208198821 208199856 208199157 Y KLF7 NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AC007879.7 96447 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 216216233 216216482 216216439 Y NA ATIC NA NA NA NA ATIC 41693 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 216291390 216291532 216291529 Y FN1 FN1,AC012462.1 NA NA NA NA FN1 7363 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 216558345 216558652 216558547 Y NA AC093850.2 NA NA NA NA AC093850.2 22114 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 218088198 218088590 218088283 Y NA NA DIRC3,IGFBP5,IGFBP2 IMR90 Hi-C 24141950 IGFBP5 529950 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 225878647 225879031 225878803 Y DOCK10 DOCK10 NA NA NA NA DOCK10 26131 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 226858171 226858617 226858345 Y NA NA IRS1 IMR90 Hi-C 24141950 IRS1 803858 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 232055335 232055819 232055722 Y NA ARMC9 NA NA NA NA ARMC9 5441 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 232468888 232470128 232469532 Y DIS3L2,PTMA,NMUR1 NA NA NA NA NA PTMA 99477 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr2 232530920 232531416 232531295 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 38189 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr2 233763823 233764207 233764133 Y EFHD1,NGEF NA NA NA NA NA NGEF 111775 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 234357256 234357513 234357369 Y NA NA NA NA NA NA DGKD 96103 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 235959667 235960159 235959834 Y NA NA NA NA NA NA SH3BP4 101050 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr2 238508822 238509122 238509050 Y RAB17,LRRFIP1 LRRFIP1 NA NA NA NA LRRFIP1 25097 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr2 242484648 242485001 242484705 Y NA STK25,BOK NA NA NA NA BOK 11135 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 10466571 10466854 10466711 Y NA NA NA NA NA NA MKKS 53701 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 10655214 10655688 10655561 Y NA JAG1 NA NA NA NA JAG1 30200 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 17637776 17637930 17637851 Y BANF2 RRBP1 NA NA NA NA RRBP1 23010 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 18686203 18686430 18686281 Y NA NA NA NA NA NA DTD1 119666 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 25842208 25842444 25842317 Y ZNF337 NA NA NA NA NA ZNF337 166731 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 25846181 25846562 25846485 Y ZNF337 NA NA NA NA NA ZNF337 170704 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr20 30300504 30300973 30300648 Y NA BCL2L1,TPX2 NA NA NA NA BCL2L1 8819 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 34357066 34357356 34357208 Y NA RBM39,PHF20 NA NA NA NA PHF20 540 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 34479476 34479734 34479606 Y NA RNU4-40P NA NA NA NA RNU4-40P 5895 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 42809563 42809791 42809669 Y FITM2,JPH2 JPH2,OSER1-AS1 NA NA NA NA JPH2 4427 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 46570019 46570356 46570188 Y NA NA NA NA NA NA SULF2 156659 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 48673016 48673032 48673024 Y SPATA2 NA SNAI1 K562,MCF7 ChIA-PET 22265404 UBE2V1 57464 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 48763277 48763795 48763638 Y B4GALT5,SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB UBE2V1,TMEM189-UBE2V1,TMEM189,CEBPB NA NA NA NA TMEM189-UBE2V1 4379 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 48921857 48922230 48922089 Y NA NA NA NA NA NA CEBPB 116481 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 49947847 49948420 49948354 Y NA NA KCNG1,NFATC2,ATP9A,BCAS4,DPM1,MOCS3 IMR90 Hi-C 24141950 KCNG1 310181 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 49982226 49982434 49982404 Y NA NA NA NA NA NA KCNG1 344560 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 50178083 50178314 50178273 Y NA NA NA NA NA NA ATP9A 204859 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 52239995 52240318 52240062 Y ZNF217 ZNF217 SUMO1P1,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 15549 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 52445816 52446339 52446069 Y ZNF217 NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 221370 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 57198784 57199334 57199089 Y NA STX16,STX16-NPEPL1 NA NA NA NA STX16 24994 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr20 60500389 60500694 60500636 Y NA NA NA NA NA NA TAF4 138172 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 26745282 26745696 26745293 Y NA NA NA NA NA NA MRPL39 232133 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 26962945 26963646 26963455 Y NA MRPL39,JAM2 NA NA NA NA MRPL39 14183 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 28082884 28083006 28082945 Y NA NA NA NA NA NA ADAMTS1 132722 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 28206130 28206252 28206191 Y NA ADAMTS1 NA NA NA NA ADAMTS1 9476 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 28218728 28219247 28219071 Y ADAMTS5,ADAMTS1 ADAMTS1 NA NA NA NA ADAMTS1 3000 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 28336800 28337144 28336952 Y ADAMTS1,ADAMTS5 NA NA NA NA NA ADAMTS5 0 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr21 28795435 28795716 28795624 Y NA NA ADAMTS5 IMR90 Hi-C 24141950 ADAMTS5 458603 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 30374865 30375265 30375125 Y C21orf7,N6AMT1,LTN1,USP16 LTN1,RPL23P2,RWDD2B,USP16 LTN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPL23P2 6511 CAGE HIRS-BM hg19 FANTOM5 8.78805252042134 chr21 30535648 30535784 30535688 Y NA U3,BACH1 NA NA NA NA U3 15176 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 37695369 37695803 37695437 Y MORC3 MORC3 NA NA NA NA MORC3 4882 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 43952961 43953452 43953160 Y PKNOX1,ABCG1,ABCG1,ABCG1 SLC37A1 NA NA NA NA SLC37A1 38843 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 46461202 46461645 46461341 Y ITGB2,ADARB1 ADARB1 ADARB1,SSR4P1 K562 ChIA-PET 22265404 ADARB1 30123 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr21 46737459 46737695 46737585 Y COL18A1 POFUT2 COL18A1 MCF7 ChIA-PET 22265404 POFUT2 31646 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 46783934 46784395 46784118 Y NA COL18A1 ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 COL18A1 38657 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr21 46958930 46959319 46959135 Y NA SLC19A1 NA NA NA NA SLC19A1 3006 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 18916909 18917370 18917163 Y MICAL3,TUBA8,DGCR6,PRODH,PRODH DGCR6,PRODH NA NA NA NA PRODH 4696 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 19279963 19280298 19280131 Y NA CLTCL1 NA NA NA NA CLTCL1 2724 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 22011632 22012115 22011859 Y NA YDJC,SDF2L1,PPIL2 NA NA NA NA PPIL2 7073 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 22170870 22171333 22171102 Y HIC2,PPM1F,MAPK1 MAPK1 NA NA NA NA MAPK1 48637 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 26311120 26311482 26311301 Y NA NA NA NA NA NA MYO18B 175009 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 28837872 28838192 28838073 Y TTC28 NA NA NA NA NA HSCB 297827 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 30644816 30645407 30645321 Y NA LIF,GATSL3 NA NA NA NA LIF 3976 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 31030399 31030736 31030505 Y SMTN,OSM,TBC1D10A,CCDC157,SF3A1,DUSP18,SLC35E4 PES1,SLC35E4,DUSP18 NA NA NA NA SLC35E4 760 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 38143248 38143734 38143618 Y LGALS1,TRIOBP,POLR2F NA NA NA NA NA TRIOBP 52237 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 41809427 41810696 41809981 Y CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF TEF,TOB2 NA NA NA NA TOB2 30331 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 42062739 42062953 42062873 Y NA XRCC6,C22orf46,NHP2L1 NA NA NA NA C22orf46 19990 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 42839941 42840323 42840234 Y POLDIP3,C22orf32,TCF20,RRP7A,NFAM1 NA MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RRP7A 73485 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 43333511 43333722 43333661 Y POLDIP3,ARFGAP3,PACSIN2,PACSIN2 NA NA NA NA NA PACSIN2 75429 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 45080339 45080681 45080664 Y PRR5 PRR5,PRR5-ARHGAP8,ARHGAP8 PARVB,KIAA1644,SAMM50 IMR90 Hi-C 24141950 PRR5-ARHGAP8 15432 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 46467914 46468476 46468052 Y NA C22orf26,MIR4763 NA NA NA NA C22orf26 19890 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr22 46483894 46484294 46483949 Y C22orf26 C22orf26,MIR4763 NA NA NA NA MIR4763 23152 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr22 50743986 50744741 50744427 Y PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2 MAPK12,MAPK11,PPP6R2 NA NA NA NA PLXNB2 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 13936849 13937176 13936976 Y NA NA C3orf19,TMEM43,CHCHD4,XPC,LSM3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CHCHD4 227194 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 14167210 14167731 14167391 Y TMEM43,XPC CHCHD4,TMEM43 NA NA NA NA TMEM43 2770 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 19188369 19188866 19188531 Y NA NA NA NA NA NA SATB1 703289 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 28367464 28367703 28367584 Y NA AZI2 NA NA NA NA AZI2 20915 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 32463504 32463726 32463567 Y CMTM6 CMTM7 NA NA NA NA CMTM7 32341 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 36805780 36806178 36806113 Y NA NA NA NA NA NA TRANK1 178370 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr3 42108875 42109165 42109003 Y ULK4 NA NA NA NA NA TRAK1 55581 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr3 42514954 42515471 42515310 Y NA NA TRAK1,VIPR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SS18L2 105861 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 47002825 47003246 47003204 Y NA CCDC12 NA NA NA NA CCDC12 18254 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 57960548 57960842 57960815 Y FLNB FLNB ARF4,FLNB IMR90 Hi-C 24141950 FLNB 31285 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 62572991 62573174 62573036 Y NA NA NA NA NA NA RPL10AP6 846211 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 66507485 66507541 66507513 Y NA LRIG1 NA NA NA NA LRIG1 42146 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 68196316 68196649 68196332 Y NA NA NA NA NA NA RP11-81N13.1 493195 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 72862614 72863000 72862807 Y SHQ1 SHQ1 NA NA NA NA SHQ1 46065 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 86972169 86972375 86972272 Y VGLL3 NA NA NA NA NA VGLL3 65894 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 86999128 86999300 86999212 Y CHMP2B VGLL3 NA NA NA NA VGLL3 38969 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 98505158 98505735 98505540 Y ST3GAL6 NA NA NA NA NA DCBLD2 112798 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 100519297 100519336 100519310 Y NA NA NA NA NA NA TFG 93092 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 110490435 110490524 110490469 Y NA NA PVRL3-AS1,PVRL3 IMR90 Hi-C 24141950 PVRL3 296394 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 111623667 111623869 111623803 Y NA NA NA NA NA NA ABHD10 71988 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 115502758 115503253 115502970 Y NA NA NA NA NA NA GAP43 162587 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 119237356 119237846 119237595 Y ARHGAP31,COX17,CD80,ADPRH,TMEM39A,POGLUT1 TIMMDC1 NA NA NA NA TIMMDC1 21977 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 120167583 120167922 120167648 Y NA FSTL1 NA NA NA NA FSTL1 178 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr3 126721076 126721245 126721142 Y PLXNA1 NA NA NA NA NA CHCHD6 300013 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr3 128336521 128336831 128336572 Y DNAJB8 NA NA NA NA NA RPN1 61087 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 129315034 129315445 129315335 Y COPG,PLXND1 PLXND1 NA NA NA NA PLXND1 8216 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 133147395 133147694 133147637 Y NA NA NA NA NA NA CDV3 142880 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 134047160 134047394 134047241 Y ANAPC13,ANAPC13,ANAPC13,AMOTL2 AMOTL2 NA NA NA NA AMOTL2 44927 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 134082893 134083489 134083439 Y AMOTL2 AMOTL2 NA NA NA NA AMOTL2 8832 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 145959602 145959992 145959865 Y PLSCR4 PLSCR4 NA NA NA NA PLSCR4 6974 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 149225388 149225682 149225672 Y RNF13 NA NA NA NA NA TM4SF1 131736 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 149284462 149284628 149284613 Y NA NA NA NA NA NA WWTR1 167873 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 149666531 149666918 149666689 Y NA NA NA NA NA NA PFN2 99657 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 150417166 150417289 150417212 Y NA NA NA NA NA NA SIAH2 61975 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 154987917 154988101 154988024 Y NA NA NA NA NA NA MME 248004 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 170584649 170585013 170584680 Y NA RPL22L1,EIF5A2 NA NA NA NA RPL22L1 1259 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 171903822 171903993 171903901 Y PLD1,FNDC3B NA NA NA NA NA FNDC3B 148404 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 171927297 171927567 171927433 Y PLD1,FNDC3B NA NA NA NA NA FNDC3B 171879 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 178699167 178699475 178699434 Y NA NA NA NA NA NA ZMAT3 88592 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 178978348 178978737 178978528 Y PIK3CA,MFN1,GNB4 NA NA NA NA NA ZNF639 60042 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 184301316 184301494 184301488 Y NA EPHB3 NA NA NA NA EPHB3 23744 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 187984257 187984703 187984570 Y NA NA NA NA NA NA LPP-AS2 114412 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr3 194561866 194562021 194561957 Y FAM43A NA LOC100507391,XXYLT1,ACAP2 IMR90 Hi-C 24141950 FAM43A 157244 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 6511373 6511666 6511520 Y PPP2R2C,PPP2R2C NA NA NA NA NA MAN2B2 63236 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 6891169 6891522 6891340 Y TBC1D14,TBC1D14 TBC1D14 NA NA NA NA TBC1D14 17447 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 7833117 7833393 7833178 Y AFAP1 NA NA NA NA NA AFAP1 106260 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 7846072 7846237 7846145 Y AFAP1 NA NA NA NA NA AFAP1 93416 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 26087064 26087357 26087217 Y NA NA RBPJ,TBC1D19 IMR90 Hi-C 24141950 RBPJ 75720 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 30718904 30719447 30718947 Y PCDH7,PCDH7 PCDH7 NA NA NA NA PCDH7 590 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 35022631 35023155 35023089 Y NA NA NA NA NA NA RELL1 2662843 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 37581972 37582372 37582240 Y NA NA NA NA NA NA RELL1 103626 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 38859134 38859762 38859410 Y KLF3,KLHL5,TLR1,TLR6 FAM114A1 NA NA NA NA FAM114A1 7536 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 54958023 54958135 54958077 Y NA CHIC2 SCFD2,CHIC2 IMR90 Hi-C 24141950 CHIC2 29166 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr4 55405838 55406147 55405887 Y KIT NA NA NA NA NA KIT 115938 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 66899965 66900079 66900021 Y NA NA NA NA NA NA RP11-396M11.1 57765 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 78715844 78716194 78716176 Y NA CNOT6L NA NA NA NA CNOT6L 22575 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 81960750 81960835 81960793 Y NA NA NA NA NA NA FGF5 774997 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 111086740 111086853 111086804 Y NA NA NA NA NA NA GAR1 352074 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 119756174 119756657 119756269 Y NA SEC24D NA NA NA NA SEC24D 1181 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 120437308 120437708 120437606 Y NA NA NA NA NA NA RP11-33B1.1 63362 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 138585739 138585945 138585825 Y PCDH18 NA PCDH18 IMR90 Hi-C 24141950 PCDH18 134091 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 143012897 143013276 143013057 Y NA NA NA NA NA NA IL15 457145 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 148654111 148654384 148654270 Y PRMT10 ARHGAP10 NA NA NA NA ARHGAP10 2897 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 153858553 153859077 153858605 Y TRIM2,FHDC1 NA ARFIP1,FHDC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARFIP1 159464 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 169540430 169540723 169540575 Y NA NA NA NA NA NA DDX60L 83493 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 169705913 169706245 169706080 Y NA NA NA NA NA NA CBR4 223181 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 170193381 170193745 170193612 Y SH3RF1 SH3RF1 NA NA NA NA SH3RF1 3125 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 189361062 189361328 189361166 Y NA NA NA NA NA NA HSP90AA4P 1030791 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr4 190708637 190708848 190708802 Y NA NA NA NA NA NA FRG1 151095 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr5 784651 785023 784908 Y ZDHHC11,TPPP NA NA NA NA NA TRIP13 105735 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 6712873 6713977 6713364 Y NA NA NA NA NA NA SRD5A1 81417 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr5 17184758 17185051 17184904 Y BASP1 NA NA NA NA NA BASP1 121051 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 26847119 26847280 26847167 Y NA NA NA NA NA NA CDH10 2204032 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 32760271 32760413 32760371 Y SUB1 NA NA NA NA NA SUB1 230532 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 39760848 39761179 39761033 Y NA NA PTGER4,PRKAA1,TTC33 IMR90 Hi-C 24141950 DAB2 300446 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 42994649 42995346 42995172 Y NA AC025171.1 NA NA NA NA AC025171.1 44331 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 43498058 43498404 43498231 Y NA C5orf28,RP11-159F24.3 C5orf28 MCF7 ChIA-PET 22265404 RP11-159F24.3 15997 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 55461813 55461854 55461833 Y IL6ST NA NA NA NA NA IL6ST 172992 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 55471391 55471677 55471521 Y IL6ST NA NA NA NA NA IL6ST 182570 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 60597691 60598057 60597813 Y NA ZSWIM6 ZSWIM6,C5orf43 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZSWIM6 28043 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 64062726 64062917 64062822 Y NA SREK1IP1 NA NA NA NA CWC27 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 66145750 66145926 66145797 Y NA NA CD180 IMR90 Hi-C 24141950 MAST4 255574 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr5 68338463 68338878 68338699 Y NA SLC30A5 NA NA NA NA SLC30A5 48595 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 73611863 73612159 73611974 Y NA NA RGNEF,ENC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEXB 321689 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 75034241 75034569 75034405 Y NA POC5 NA NA NA NA POC5 22928 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 83677578 83677928 83677708 Y EDIL3 CTD-2269F5.1,EDIL3 NA NA NA NA CTD-2269F5.1 317 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 87662538 87662727 87662633 Y NA NA NA NA NA NA TMEM161B 99245 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 118701841 118702237 118702039 Y NA NA NA NA NA NA HSD17B4 83901 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 119573403 119573585 119573488 Y NA NA NA NA NA NA PRR16 224388 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 131074214 131074509 131074363 Y NA NA NA NA NA NA FNIP1 56201 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 137827710 137828119 137827817 Y EGR1 EGR1,ETF1 NA NA NA NA EGR1 28531 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 139076374 139076603 139076510 Y CXXC5 NA NA NA NA NA CXXC5 51490 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 139090940 139091124 139091019 Y NA NA CXXC5 K562 ChIA-PET 22265404 CXXC5 66056 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 140098281 140098628 140098472 Y NA HARS2,HARS,ZMAT2 NA NA NA NA ZMAT2 22016 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr5 149518246 149518623 149518550 Y NA PDGFRB NA NA NA NA PDGFRB 14812 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr5 150401918 150402484 150402308 Y GPX3,TNIP1 GPX3 NA NA NA NA GPX3 3794 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 159592617 159593055 159592885 Y NA PWWP2A TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PWWP2A 48187 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 171788471 171789086 171788773 Y DUSP1,STK10,UBTD2 NA NA NA NA NA UBTD2 79396 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 172160417 172160946 172160788 Y ATP6V0E1 DUSP1 ERGIC1,ATP6V0E1,C5orf41,DUSP1,NEURL1B,BNIP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP1 35252 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 172192263 172193766 172192583 Y UBTD2,ERGIC1,C5orf41,DUSP1 DUSP1 NA NA NA NA DUSP1 2432 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 178052813 178053238 178053128 Y AGXT2L2,CLK4 CLK4 COL23A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLK4 2378 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr5 178692524 178692976 178692825 Y ADAMTS2 NA NA NA NA NA ADAMTS2 77455 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 3987035 3987350 3987158 Y NA PRPF4B SLC22A23,FAM50B,PXDC1,TUBB2B,BPHL,LOC100507194 IMR90 Hi-C 24141950 PRPF4B 32151 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 4317088 4317563 4317434 Y CDYL NA RPP40,CDYL,LYRM4 IMR90 Hi-C 24141950 ECI2 183257 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 11586757 11587121 11586877 Y NA NA NA NA NA NA NEDD9 206176 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 17418097 17418389 17418210 Y NA CAP2 NA NA NA NA CAP2 26650 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 17715315 17715544 17715493 Y NUP153 NUP153 NUP153,KIF13A IMR90 Hi-C 24141950 NUP153 10659 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 25992254 25993073 25992840 Y NA TRIM38,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB NA NA NA NA HIST1H3A 25645 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 28601930 28602271 28602104 Y NA NA NA NA NA NA ZSCAN23 192651 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 30787859 30788252 30788206 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,IER3 NA FLOT1,TUBB,VARS2,DHX16,IER3,DDR1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDR1 53946 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 35457906 35458213 35458053 Y TEAD3 FANCE,RPL10A,TEAD3 NA NA NA NA TEAD3 4640 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 37070053 37070857 37070460 Y CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2 NA PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 65122 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 37212541 37212901 37212835 Y NA TBC1D22B NA NA NA NA TBC1D22B 10647 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 39850347 39850811 39850571 Y NA MOCS1 NA NA NA NA MOCS1 49479 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr6 52377018 52377269 52377212 Y GSTA5,TRAM2 NA NA NA NA NA TRAM2 62444 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 64810831 64811146 64811044 Y NA NA NA NA NA NA PHF3 467106 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 72178822 72179167 72178995 Y NA NA OGFRL1,MIR30C2 IMR90 Hi-C 24141950 LINC00472 50350 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 83931407 83931579 83931543 Y UBE2CBP,PRSS35,RWDD2A,PGM3 RWDD2A,PGM3 RWDD2A,PGM3 IMR90 Hi-C 24141950 PGM3 29752 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 106389460 106389820 106389604 Y PRDM1 NA NA NA NA NA ATG5 381846 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 121399720 121399938 121399829 Y NA NA NA NA NA NA RP1-276J11.2 300680 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 125420389 125420754 125420652 Y NA TPD52L1 NA NA NA NA TPD52L1 17441 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 125420883 125421200 125421024 Y NA TPD52L1 NA NA NA NA TPD52L1 16995 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr6 125426714 125426967 125426959 Y NA TPD52L1 NA NA NA NA TPD52L1 11228 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 140984884 140985153 140985121 Y NA NA LOC100132735 IMR90 Hi-C 24141950 CITED2 1291127 CAGE HIRS-BM hg19 FANTOM5 89.1359612785593 chr6 143171849 143172301 143172148 Y HIVEP2 NA NA NA NA NA AIG1 207332 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 143206296 143206927 143206703 Y HIVEP2 NA NA NA NA NA AIG1 172706 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr6 148588961 148589218 148589102 Y UST SASH1 SASH1 IMR90 Hi-C 24141950 SASH1 2222 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr6 148822303 148822649 148822378 Y NA NA NA NA NA NA SASH1 230863 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 148834877 148835159 148834957 Y UST NA NA NA NA NA UST 231305 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr6 151178746 151179109 151178841 Y NA MTHFD1L NA NA NA NA MTHFD1L 5576 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 155492232 155492854 155492387 Y SCAF8 NA NA NA NA NA TFB1M 140773 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 157342507 157343524 157343342 Y ARID1B,ZDHHC14 NA NA NA NA NA ARID1B 245444 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 158136804 158137189 158136890 Y NA NA TMEM242,SNX9,ZDHHC14 IMR90 Hi-C 24141950 SNX9 105107 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 158254729 158255396 158255020 Y NA SNX9 NA NA NA NA SNX9 12433 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 158424430 158424803 158424679 Y SYNJ2 SYNJ2 NA NA NA NA SYNJ2 23542 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 158463343 158463878 158463391 Y SNX9,SYNJ2 NA NA NA NA NA SYNJ2 62455 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr6 160556338 160556646 160556534 Y NA NA NA NA NA NA IGF2R 168207 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 163840967 163841346 163841003 Y NA QKI NA NA NA NA QKI 7935 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 167234873 167234954 167234914 Y NA NA NA NA NA NA RPS6KA2 82985 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 169497404 169497715 169497550 Y THBS2 NA PHF10,THBS2,WDR27,C6orf70 IMR90 Hi-C 24141950 RP11-417E7.1 63304 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 169568038 169568505 169568172 Y NA RP11-417E7.1 C6orf70,THBS2,PHF10,WDR27 IMR90 Hi-C 24141950 RP11-417E7.1 7019 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr6 170600439 170600921 170600644 Y NA FAM120B NA NA NA NA FAM120B 2648 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr7 652642 652893 652768 Y PRKAR1B,ADAP1 NA NA NA NA NA PDGFA 94709 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 949613 949923 949864 Y NA GET4 NA NA NA NA GET4 35424 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 1572262 1572844 1572636 Y ZFAND2A,MAFK INTS1,MAFK,PSMG3-AS1,PSMG3 NA NA NA NA MAFK 3912 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 2903227 2903785 2903462 Y LFNG,LFNG,TTYH3,GNA12 AC006028.11,GNA12 GNA12 MCF7 ChIA-PET 22265404 GNA12 21269 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr7 5634980 5635411 5634989 Y AIMP2,FBXL18,ACTB,FSCN1 ACTB,FSCN1 RNF216 IMR90 Hi-C 24141950 FSCN1 4541 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 17029591 17029925 17029620 Y NA NA AHR IMR90 Hi-C 24141950 BZW2 345835 CAGE HIRS-BM hg19 FANTOM5 53.983751196874 chr7 17336947 17337086 17336970 Y NA NA NA NA NA NA AC019117.1 75405 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 17564000 17564574 17564249 Y NA NA AHR IMR90 Hi-C 24141950 AC019117.1 151509 CAGE HIRS-BM hg19 FANTOM5 17.5761050408427 chr7 20239036 20239390 20239182 Y TWISTNB NA NA NA NA NA RPL21P75 198690 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 25064852 25065012 25064919 Y NA OSBPL3 OSBPL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OSBPL3 45599 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr7 28548594 28548738 28548668 Y NA NA NA NA NA NA CREB5 211654 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 33762230 33762341 33762268 Y NA NA BMPER,BBS9 IMR90 Hi-C 24141950 BMPER 180182 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 40867151 40867518 40867335 Y NA NA NA NA NA NA INHBA 873188 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 46842508 46842579 46842545 Y NA NA NA NA NA NA TNS3 777577 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 47553531 47553930 47553845 Y C7orf65 NA NA NA NA NA TNS3 66226 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 56243524 56243790 56243559 Y LOC389493 NA NA NA NA NA CHCHD2 71255 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 63767130 63767234 63767166 Y NA ZNF736 NA NA NA NA ZNF736 1293 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 73704690 73704803 73704747 Y CLIP2 RFC2,CLIP2 NA NA NA NA CLIP2 2885 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 75993825 75994303 75994024 Y NA YWHAG YWHAG MCF7 ChIA-PET 22265404 YWHAG 7477 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 77908468 77908642 77908513 Y NA NA NA NA NA NA PHTF2 482346 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr7 92361219 92361296 92361260 Y NA NA NA NA NA NA AC002454.1 102501 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 94021237 94021945 94021560 Y NA NA NA NA NA NA COL1A2 0 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr7 100772573 100772742 100772614 Y SERPINE1 TRIM56,SERPINE1,AP1S1 NA NA NA NA SERPINE1 4203 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 100809834 100810470 100810178 Y NA SERPINE1,AP1S1,ZNHIT1,PLOD3 NA NA NA NA AP1S1 14156 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 101929978 101930313 101930074 Y CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2 NA NA NA NA NA PRKRIP1 72006 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 104884738 104885065 104884890 Y NA NA NA NA NA NA SRPK2 152690 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 107644827 107645024 107644950 Y LAMB1 LAMB1 NA NA NA NA LAMB1 3127 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 116168216 116168790 116168273 Y CAV2,CAV2,CAV1,CAV1,CAV1,CAV1 CAV1 NA NA NA NA CAV1 5377 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 120938122 120938485 120938307 Y FAM3C NA NA NA NA NA FAM3C 95933 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 126341155 126341491 126341268 Y NA NA NA NA NA NA ZNF800 728487 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 128170830 128171695 128171212 Y NA NA IMPDH1,HILPDA,METTL2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 METTL2B 56047 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr7 130575591 130576512 130576394 Y NA NA NA NA NA NA MKLN1 216343 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 130636331 130636776 130636707 Y MKLN1 NA NA NA NA NA MKLN1 156079 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 130670866 130671152 130671128 Y MKLN1 NA NA NA NA NA MKLN1 121703 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 130875085 130875581 130875276 Y NA NA NA NA NA NA LINC-PINT 82150 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 133390444 133390812 133390625 Y NA NA NA NA NA NA EXOC4 454615 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 134117156 134117311 134117298 Y NA AKR1B1 NA NA NA NA AKR1B1 24725 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 135665513 135665767 135665568 Y NA MTPN NA NA NA NA MTPN 5412 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 137372806 137372951 137372895 Y NA NA NA NA NA NA CREB3L2 311862 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 142554207 142554559 142554324 Y EPHB6 NA NA NA NA NA GSTK1 384627 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr7 149468740 149469267 149468803 Y NA ZNF467 NA NA NA NA ZNF467 172 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr7 150363010 150363297 150363193 Y LOC100128542 NA NA NA NA NA ZNF775 299131 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 13329086 13329400 13329354 Y DLC1 DLC1 NA NA NA NA DLC1 41767 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 16609902 16609923 16609912 Y VPS37A NA TUSC3,MSR1 IMR90 Hi-C 24141950 ZDHHC2 401615 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr8 26306627 26307336 26307213 Y NA NA BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PNMA2 62272 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 26466209 26466513 26466418 Y PPP2R2A,BNIP3L NA NA NA NA NA DPYSL2 96418 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr8 26466894 26467238 26467101 Y NA NA NA NA NA NA DPYSL2 97103 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr8 28930417 28930501 28930459 Y NA CTD-2647L4.4 NA NA NA NA CTD-2647L4.4 18965 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 33579772 33580017 33579844 Y NA NA NA NA NA NA RNF122 157129 CAGE HIRS-BM hg19 FANTOM5 10.0434885947672 chr8 33668021 33668356 33668148 Y NA NA NA NA NA NA RNF122 245378 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 35382808 35383133 35382968 Y NA NA NA NA NA NA RP1-84O15.1 1203648 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 38627692 38628125 38628027 Y LETM2,LETM2,C8orf86,PLEKHA2,TACC1 TACC1 NA NA NA NA TACC1 43988 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 42370484 42370865 42370805 Y NA SLC20A2 NA NA NA NA SLC20A2 24204 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 59768911 59769118 59769011 Y NA NA NA NA NA NA NSMAF 198508 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 69672075 69672426 69672227 Y NA NA NA NA NA NA ARFGEF1 1418163 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 80705910 80706255 80706054 Y HEY1 HEY1 HEY1,MRPS28 IMR90 Hi-C 24141950 HEY1 27812 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 90845997 90846144 90846052 Y RIPK2,OSGIN2 NA OSGIN2,NBN,RIPK2,DECR1 IMR90 Hi-C 24141950 OSGIN2 65943 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 97921730 97922056 97921913 Y NA NA NA NA NA NA TSPYL5 366120 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 98001253 98001769 98001454 Y PGCP NA NA NA NA NA TSPYL5 286407 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr8 103743323 103743460 103743418 Y NA NA KLF10 IMR90 Hi-C 24141950 KLF10 77193 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 110589431 110589605 110589518 Y NA EBAG9 NA NA NA NA EBAG9 39491 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 119808728 119809168 119808881 Y TNFRSF11B NA TNFRSF11B IMR90 Hi-C 24141950 TNFRSF11B 153271 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr8 124665857 124666229 124666132 Y NA NA NA NA NA NA FAM91A1 112467 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 128099457 128099542 128099514 Y NA NA NA NA NA NA FAM84B 530819 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 128973364 128973763 128973565 Y MYC NA NA NA NA NA PVT1 168585 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 134141328 134141671 134141507 Y TG NA NA NA NA NA NDRG1 170594 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 135843585 135843751 135843688 Y ZFAT NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFAT 120293 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 141358966 141359028 141358983 Y NA NA NA NA NA NA TRAPPC9 107650 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 143533998 143534621 143534303 Y LYNX1,LYNX1,TSNARE1,BAI1 NA BAI1,TSNARE1 MCF7 ChIA-PET 22265404 TSNARE1 51397 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 144300737 144301128 144300944 Y GPIHBP1 ZFP41,GLI4 NA NA NA NA ZFP41 26152 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 144301806 144302247 144302025 Y MAFA ZFP41,GLI4 NA NA NA NA ZFP41 25033 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr8 144360422 144361034 144360946 Y ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT ZFP41,GLI4,RP13-582O9.5,ZNF696 NA NA NA NA RP13-582O9.5 826 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 23850835 23851256 23851099 Y NA NA NA NA NA NA TUSC1 1825600 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 33953868 33954185 33954034 Y UBE2R2,UBAP1 NA NA NA NA NA UBAP2 92762 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 35114116 35114547 35114222 Y DNAJB5,KIAA1539 VCP,FANCG,PIGO,STOML2,UNC13B NA NA NA NA FAM214B 0 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr9 35520478 35520852 35520494 Y NA NA NA NA NA NA TESK1 82515 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr9 35914292 35914707 35914657 Y NA HRCT1 NA NA NA NA HRCT1 10103 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr9 37859471 37859543 37859507 Y NA NA NA NA NA NA EXOSC3 60037 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 37930298 37930375 37930337 Y NA NA NA NA NA NA EXOSC3 130864 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 73021810 73022419 73022127 Y NA KLF9 NA NA NA NA KLF9 5121 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 73033763 73035382 73035076 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 6223 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr9 75549526 75549619 75549601 Y NA NA NA NA NA NA ANXA1 215054 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 75797609 75797655 75797632 Y NA ANXA1 NA NA NA NA ANXA1 32936 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 87370377 87370471 87370425 Y NA NA NA NA NA NA NTRK2 88911 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr9 87470234 87470516 87470442 Y NTRK2,NTRK2,NTRK2 NA NA NA NA NA NTRK2 188768 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 88902044 88902242 88902143 Y NA ISCA1 NA NA NA NA ISCA1 6368 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 95894467 95895029 95894875 Y IPPK,PHF2,C9orf89,NINJ1 C9orf89 NA NA NA NA NINJ1 0 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 101868249 101868435 101868378 Y NA TGFBR1 NA NA NA NA TGFBR1 3929 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 110512153 110512586 110512216 Y KLF4 NA KLF4 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF4 261390 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr9 112905689 112906067 112905829 Y NA NA NA NA NA NA TXN 110853 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 114811444 114811737 114811486 Y UGCG NA NA NA NA NA SUSD1 123951 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 117566825 117567042 117566994 Y TNFSF15 TNFSF15 NA NA NA NA TNFSF15 419 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 118412488 118412760 118412588 Y NA NA PAPPA,ASTN2,LOC100128505,LINC00474 IMR90 Hi-C 24141950 TNC 533952 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 118701397 118701694 118701515 Y NA NA ASTN2,LINC00474,PAPPA IMR90 Hi-C 24141950 TRIM32 745887 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 120481913 120482131 120481990 Y TLR4 TLR4 NA NA NA NA TLR4 17303 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 124361597 124361984 124361689 Y NA DAB2IP NA NA NA NA DAB2IP 34261 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr9 124363625 124363839 124363710 Y NA DAB2IP NA NA NA NA DAB2IP 36289 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 124498744 124498978 124498839 Y GSN NA NA NA NA NA DAB2IP 171408 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 127980597 127980978 127980790 Y NA PPP6C,RABEPK,HSPA5,GAPVD1 NA NA NA NA RABEPK 19776 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 128422195 128422516 128422378 Y HSPA5 MAPKAP1 NA NA NA NA MAPKAP1 44997 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 131127114 131127521 131127297 Y SLC25A25 COQ4,TRUB2,SLC27A4,URM1,CERCAM NA NA NA NA URM1 4077 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 131900982 131901116 131901071 Y ENDOG,PHYHD1,CRAT,IER5L PPP2R4,IER5L NA NA NA NA PPP2R4 29753 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 132175926 132176326 132176076 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00963 67404 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chr9 132349858 132350089 132350073 Y NA RP11-492E3.2 LOC100506190,IER5L,C9orf50 MCF7 ChIA-PET 22265404 RP11-492E3.2 14170 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 133565449 133565699 133565571 Y NA RP11-57C19.2,EXOSC2,ABL1 NA NA NA NA EXOSC2 1409 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr9 134248752 134249121 134248943 Y AIF1L,POMT1,PRRC2B PRRC2B PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 18359 CAGE HIRS-BM hg19 FANTOM5 5.02174429738362 chr9 136009131 136009458 136009277 Y GTF3C4,DDX31,TSC1,RALGDS RALGDS NA NA NA NA RALGDS 27843 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 136576519 136576779 136576603 Y SURF4 SARDH NA NA NA NA SARDH 26298 CAGE HIRS-BM hg19 FANTOM5 13.809796817805 chr9 136710457 136710861 136710661 Y RPL7A,SLC2A6 NA NA NA NA NA SARDH 107380 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 137221069 137221192 137221119 Y RXRA RXRA NA NA NA NA RXRA 14125 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chr9 137536549 137536868 137536739 Y COL5A1 COL5A1 NA NA NA NA COL5A1 4929 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chr9 139466507 139466851 139466737 Y NA NOTCH1,RP11-611D20.2 MIR4674,NOTCH1,SEC16A,C9orf163 IMR90 Hi-C 24141950 RP11-611D20.2 27843 CAGE HIRS-BM hg19 FANTOM5 6.27718037172953 chr9 140117588 140118357 140118103 Y C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1 ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,C9orf169,TUBB4B NA NA NA NA C9orf169 501 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chrX 3732842 3733263 3733002 Y PRKX NA NA NA NA NA PRKX 103193 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chrX 56839801 56840427 56840156 Y NA NA NA NA NA NA UQCRBP1 77791 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chrX 68004355 68004677 68004478 Y NA SERBP1P1,EFNB1 NA NA NA NA SERBP1P1 3040 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chrX 69654278 69654566 69654417 Y DLG3 DLG3 NA NA NA NA DLG3 8145 CAGE HIRS-BM hg19 FANTOM5 2.51087214869181 chrX 69655002 69655313 69655257 Y DLG3 DLG3 NA NA NA NA DLG3 7398 CAGE HIRS-BM hg19 FANTOM5 3.76630822303772 chrX 135275239 135275595 135275317 Y CT45A6,MMGT1,FHL1,FHL1 NA NA NA NA NA MAP7D3 61046 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591 chrX 152753051 152753292 152753194 Y NA TREX2,BGN,HAUS7 BGN MCF7 ChIA-PET 22265404 BGN 5105 CAGE HIRS-BM hg19 FANTOM5 10.0434885947672 chrX 154256125 154256514 154256179 Y IKBKG,IKBKG,IKBKG,GAB3,MPP1,LOC100132963,F8A1,F8A2 FUNDC2,BRCC3 NA NA NA NA FUNDC2 3870 CAGE HIRS-BM hg19 FANTOM5 1.25543607434591