chr1	845485	845678	845582	Y	NA	SAMD11,NOC2L,KLHL17	NA	NA	NA	NA	SAMD11	12582	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	1368471	1368786	1368620	Y	RNF223,DVL1,NADK,LOC441869,TMEM88B,VWA1	CCNL2,MRPL20,ANKRD65,TMEM88B,VWA1,ATAD3B	NA	NA	NA	NA	VWA1	230	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	2477415	2477971	2477660	Y	NA	PANK4,FAM213B	NA	NA	NA	NA	PANK4	21376	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	2478276	2478817	2478474	Y	SKI,PANK4,TNFRSF14	PANK4,FAM213B	NA	NA	NA	NA	PANK4	22237	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	7728673	7728970	7728748	Y	PER3	NA	NA	NA	NA	NA	VAMP3	100359	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	7729547	7729971	7729640	Y	NA	NA	NA	NA	NA	NA	VAMP3	99358	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	7764543	7764931	7764717	Y	PER3	NA	NA	NA	NA	NA	VAMP3	64398	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	10851136	10851604	10851471	Y	NA	CASZ1	NA	NA	NA	NA	CASZ1	3103	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	16339360	16339596	16339414	Y	NA	ZBTB17	NA	NA	NA	NA	ZBTB17	38733	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	16825333	16826291	16825792	Y	NA	NA	SPATA21,NECAP2,CROCCP3,NBPF1,CROCC	IMR90	Hi-C	24141950	NECAP2	60166	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	17231253	17231704	17231392	Y	PADI4,PADI2	NA	CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MFAP2	73626	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	17240188	17240783	17240515	Y	NA	NA	CROCC	K562	ChIA-PET	22265404	MFAP2	64547	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	17867253	17867735	17867370	Y	NA	ARHGEF10L	NA	NA	NA	NA	ARHGEF10L	2923	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	18973426	18973594	18973515	Y	NA	NA	NA	NA	NA	NA	ALDH4A1	253681	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	23881180	23881765	23881497	Y	NA	E2F2,ID3	E2F2	IMR90	Hi-C	24141950	ID3	2520	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	25425738	25426059	25426056	Y	NA	NA	RUNX3,IL22RA1,CLIC4,SRRM1,SYF2	IMR90	Hi-C	24141950	SYF2	130934	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	25566618	25566670	25566639	Y	NA	SYF2	SYF2	MCF7	ChIA-PET	22265404	SYF2	9625	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	26827232	26827869	26827508	Y	PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A	HMGN2	HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	HMGN2	30291	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	27024638	27025138	27024825	Y	SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV	ARID1A	NA	NA	NA	NA	ARID1A	4114	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	27175784	27176273	27175984	Y	C1orf172,AIM1L,ZNF683,RPS6KA1,SFN	ZDHHC18,SFN,GPN2,NUDC,GPATCH3	NA	NA	NA	NA	SFN	11360	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	27691785	27692261	27692091	Y	TMEM222,MAP3K6	TMEM222,RP11-4K3__A.5,SYTL1,GPR3	NA	NA	NA	NA	GPR3	24887	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	27853337	27854089	27853858	Y	NA	WASF2	NA	NA	NA	NA	WASF2	38668	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	27854575	27854919	27854692	Y	SYTL1,FGR,FGR,FGR,FAM76A,C1orf38	WASF2	NA	NA	NA	NA	WASF2	39906	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	27901397	27901604	27901422	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	27338	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	28573636	28574084	28573917	Y	NA	DNAJC8,ATPIF1,SESN2	NA	NA	NA	NA	SESN2	9954	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	29101544	29101853	29101799	Y	EPB41	YTHDF2	NA	NA	NA	NA	YTHDF2	40411	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	31627566	31627958	31627874	Y	SDC3,HCRTR1,NKAIN1	NA	SNRNP40,PUM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	82443	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	31628220	31628457	31628359	Y	NA	NA	PUM1,NKAIN1,SERINC2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	81944	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	31643824	31643962	31643871	Y	NA	NA	NA	NA	NA	NA	NKAIN1	66439	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	32015159	32015590	32015321	Y	NA	NA	FABP3,SERINC2,LOC284551,PEF1,HCRTR1,NKAIN1,TINAGL1	IMR90	Hi-C	24141950	PEF1	92907	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	33077721	33078012	33077949	Y	FNDC5	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	36492	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	33182280	33182513	33182368	Y	KIAA1522	KIAA1522	SYNC,S100PBP,BSDC1,ZBTB8B,RBBP4,KIAA1522,YARS	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KIAA1522	22973	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	33829513	33829825	33829684	Y	FNDC5,ZSCAN20	NA	NA	NA	NA	NA	PHC2	64828	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	40264988	40265120	40265045	Y	NA	BMP8B	HEYL,PPIE,BMP8B,MFSD2A,MACF1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	BMP8B	12455	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	41564044	41564297	41564171	Y	NA	NA	NA	NA	NA	NA	SCMH1	141529	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	41825927	41826139	41826062	Y	NA	FOXO6	NA	NA	NA	NA	FOXO6	333	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	41826642	41826952	41826745	Y	NA	FOXO6	NA	NA	NA	NA	FOXO6	1048	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	43389220	43390772	43390027	Y	NA	SLC2A1	NA	NA	NA	NA	SLC2A1	31758	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	45085192	45085548	45085380	Y	NA	NA	C1orf228,TMEM53	IMR90	Hi-C	24141950	TMEM53	52679	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	52088228	52088763	52088412	Y	NA	OSBPL9	NA	NA	NA	NA	OSBPL9	47377	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr1	53168640	53169047	53168726	Y	NA	ZYG11B	SELRC1	MCF7,K562	ChIA-PET	22265404	ZYG11B	21079	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	54873075	54873515	54873406	Y	SSBP3,SSBP3	SSBP3	NA	NA	NA	NA	SSBP3	3637	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	54925355	54925634	54925492	Y	NA	SSBP3	TMEM59,TCEANC2,SSBP3,CYB5RL,MRPL37	IMR90	Hi-C	24141950	SSBP3	48203	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	54953784	54954325	54954090	Y	SSBP3,SSBP3	NA	TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SSBP3	76632	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	59350687	59351233	59350859	Y	FGGY	NA	NA	NA	NA	NA	JUN	102902	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	59369049	59370138	59369602	Y	FGGY	NA	NA	NA	NA	NA	JUN	121264	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	65888047	65888596	65888066	Y	LEPR,LEPROT,LEPR,LEPROT	LEPR,LEPROT	NA	NA	NA	NA	LEPROT	3777	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	66173812	66174180	66173996	Y	NA	NA	PDE4B	IMR90	Hi-C	24141950	LEPROT	289542	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	66537394	66537579	66537468	Y	SGIP1,PDE4B	NA	NA	NA	NA	NA	SGIP1	459487	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	68663588	68663867	68663728	Y	NA	WLS,RPS7P4	NA	NA	NA	NA	WLS	32936	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	72749220	72749791	72749447	Y	NEGR1	NEGR1	NA	NA	NA	NA	NEGR1	2803	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	74970988	74971139	74971082	Y	NA	NA	NA	NA	NA	NA	TYW3	225697	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	77399446	77399567	77399507	Y	NA	NA	NA	NA	NA	NA	TPI1P1	235972	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	83153203	83153587	83153396	Y	NA	NA	NA	NA	NA	NA	RP11-475O6.1	1171119	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	84896355	84896549	84896476	Y	NA	RPF1	NA	NA	NA	NA	RPF1	46393	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	85643319	85643587	85643547	Y	NA	SYDE2	MIR4423	IMR90	Hi-C	24141950	SYDE2	21142	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	89358212	89358439	89358316	Y	PKN2,CCBL2	GTF2B	NA	NA	NA	NA	GTF2B	2585	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	89887466	89887838	89887537	Y	GBP3,GBP1,GBP2,GBP4,GBP5,LRRC8C,LRRC8B	NA	NA	NA	NA	NA	LRRC8B	100557	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	90319744	90319959	90319950	Y	NA	LRRC8D	NA	NA	NA	NA	LRRC8D	35171	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	90376424	90376756	90376561	Y	LRRC8D,LRRC8D,ZNF326	NA	NA	NA	NA	NA	GEMIN8P4	81124	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	94371317	94371601	94371445	Y	NA	DNTTIP2,GCLM	NA	NA	NA	NA	GCLM	1365	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	94788386	94788592	94788436	Y	ARHGAP29,F3	ARHGAP29	ARHGAP29,ABCA4,BCAR3,GCLM	IMR90	Hi-C	24141950	ARHGAP29	49762	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	144927217	144927550	144927432	Y	PDE4DIP,SEC22B,PDE4DIP,NOTCH2NL,NBPF10	RNU2-38P	NA	NA	NA	NA	RNU2-38P	15122	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	145455122	145455741	145455465	Y	PDE4DIP,PDE4DIP,SEC22B,NOTCH2NL,NBPF10,CD160,TXNIP	TXNIP,POLR3GL,ANKRD34A,LIX1L,RBM8A	NA	NA	NA	NA	POLR3GL	12647	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	147806841	147807184	147807140	Y	NA	RNU1-122P	NA	NA	NA	NA	RNU1-122P	1955	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr1	149821015	149821647	149821349	Y	NA	HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB	NA	NA	NA	NA	HIST2H2AA4	372	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	150185878	150186128	150186012	Y	HIST2H2AC,VPS45,RPRD2,ANP32E	ANP32E	NA	NA	NA	NA	ANP32E	20376	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr1	151386066	151386146	151386106	Y	NA	SELENBP1,PSMB4,POGZ	NA	NA	NA	NA	PSMB4	16056	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	151418157	151418544	151418397	Y	NA	PSMB4,POGZ	NA	NA	NA	NA	POGZ	11397	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	153505144	153505346	153505245	Y	NA	BX470102.3,S100A6,S100A4	NA	NA	NA	NA	BX470102.3	1065	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	153541018	153541368	153541269	Y	PGLYRP3,S100A7L2,S100A6,S100A2,S100A16,S100A14,S100A13,S100A13,S100A13	BX470102.3,S100A6,S100A4,S100A14	NA	NA	NA	NA	S100A4	20406	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	153853385	153853782	153853590	Y	NA	GATAD2B	NA	NA	NA	NA	GATAD2B	39669	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	154973036	154973200	154973120	Y	CLK2,ADAR,ADAR,PYGO2,CKS1B,ZBTB7B,DCST1	PBXIP1,PYGO2,SHC1,FLAD1,ADAM15	NA	NA	NA	NA	ZBTB7B	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	154973335	154973935	154973656	Y	ADAR,ADAR,MTX1,SHC1,ZBTB7B	PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	208	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	155164183	155164959	155164537	Y	NA	TRIM46,KRTCAP2,MUC1,MIR92B,MTX1,THBS3,GBAP1,GBA	NA	NA	NA	NA	MIR92B	1215	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr1	155830201	155830522	155830413	Y	ASH1L,MEX3A,ARHGEF2,ARHGEF2	GON4L,SYT11,RIT1	ARHGEF2,RXFP4,SNORA42,RIT1,KIAA0907	IMR90	Hi-C	24141950	SYT11	2901	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr1	155944562	155945214	155944815	Y	C1orf182,C1orf61,SYT11,PAQR6,PAQR6	KIAA0907,ARHGEF2,SSR2	NA	NA	NA	NA	ARHGEF2	29647	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	155945743	155946196	155946108	Y	C1orf182,ASH1L,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,SLC25A44,RIT1,KIAA0907,ARHGEF2,ARHGEF2	KIAA0907,ARHGEF2,SSR2	RXFP4,KIAA0907	K562	ChIA-PET	22265404	ARHGEF2	28665	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	156072500	156072641	156072571	Y	NA	LAMTOR2,MEX3A,LMNA	LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3	IMR90	Hi-C	24141950	LMNA	22136	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	156095033	156095181	156095051	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,RIT1,ARHGEF2,ARHGEF2,LMNA	MEX3A,LMNA	NA	NA	NA	NA	LMNA	44669	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	156426931	156427503	156427197	Y	ARHGEF2,ARHGEF2,LMNA,SLC25A44,PMF1,C1orf182,SH2D2A,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	41117	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	156472693	156472952	156472780	Y	LMNA,C1orf182,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	4073	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	156474686	156475018	156474923	Y	SLC25A44,PMF1,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	6066	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	159851477	159851987	159851825	Y	SLAMF9,COPA,SLAMF8,TAGLN2	C1orf204,CCDC19,TAGLN2	NA	NA	NA	NA	CCDC19	15966	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	160989381	160990254	160990012	Y	NDUFS2,ADAMTS4,F11R	F11R,TSTD1,USF1	NA	NA	NA	NA	F11R	243	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	161359666	161360218	161359899	Y	HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A	NA	NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SDHC	77619	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	161369073	161369991	161369486	Y	NA	NA	ADAMTS4,NDUFS2,APOA2,TOMM40L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SDHC	87026	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	164389251	164389388	164389267	Y	NA	NA	NA	NA	NA	NA	HMGB3P6	65247	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	165797615	165798367	165798308	Y	UCK2	UCK2,TMCO1	NA	NA	NA	NA	TMCO1	2623	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	167191021	167191933	167191618	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	2955	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	167650955	167651264	167651178	Y	POU2F1,RCSD1	MPZL1	NA	NA	NA	NA	MPZL1	37165	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	172078699	172079070	172078885	Y	NA	NA	C1orf105	IMR90	Hi-C	24141950	DNM3	270078	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	172327558	172328156	172327708	Y	NA	NA	NA	NA	NA	NA	PIGC	83074	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	172673235	172673367	172673301	Y	C1orf9,C1orf9,FASLG	NA	C1orf9	IMR90	Hi-C	24141950	PIGC	262005	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	174937322	174937525	174937409	Y	KIAA0040,KIAA0040	CACYBP	NA	NA	NA	NA	CACYBP	28775	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	175571336	175571362	175571351	Y	NA	NA	NA	NA	NA	NA	TNR	139544	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	176836644	176837016	176836830	Y	ASTN1	NA	NA	NA	NA	NA	RFWD2	662015	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	178995927	178996290	178996175	Y	AXDND1,RALGPS2,TOR3A	FAM20B	NA	NA	NA	NA	FAM20B	2988	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	179296885	179297079	179297006	Y	AXDND1,TOR3A,ABL2,SOAT1	SOAT1	NA	NA	NA	NA	SOAT1	35960	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	179734817	179735116	179734826	Y	FAM163A	FAM163A	NA	NA	NA	NA	FAM163A	24519	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	181074349	181074924	181074645	Y	XPR1,IER5	IER5	NA	NA	NA	NA	IER5	18711	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	182580570	182580950	182580946	Y	NA	RGS16	NA	NA	NA	NA	RGS16	9027	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	183951471	183951644	183951558	Y	NCF2,NCF2	NA	NA	NA	NA	NA	TSEN15	67167	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	185250433	185250655	185250484	Y	HMCN1,RNF2,SWT1,SWT1,IVNS1ABP	IVNS1ABP	NA	NA	NA	NA	IVNS1ABP	33806	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	185264835	185265233	185265202	Y	NA	IVNS1ABP	NA	NA	NA	NA	IVNS1ABP	19228	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	185298342	185298619	185298496	Y	FAM129A,RNF2,TRMT1L,SWT1,TRMT1L,SWT1,IVNS1ABP	IVNS1ABP	IVNS1ABP	MCF7	ChIA-PET	22265404	IVNS1ABP	13881	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	185536131	185536449	185536350	Y	NA	NA	IVNS1ABP,SWT1,MIR548F1,HMCN1	IMR90	Hi-C	24141950	IVNS1ABP	251670	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	193284093	193284405	193284249	Y	NA	NA	CDC73,B3GALT2	IMR90	Hi-C	24141950	B3GALT2	130309	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	193583968	193584211	193584008	Y	NA	NA	NA	NA	NA	NA	B3GALT2	430184	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	201139670	201140154	201139905	Y	NA	TMEM9	KIF21B,IGFN1,LAD1	IMR90	Hi-C	24141950	TMEM9	968	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	201619383	201619798	201619705	Y	SHISA4,GPR37L1,NAV1	NA	NA	NA	NA	NA	CSRP1	142799	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr1	203259429	203259985	203259729	Y	RABIF,KLHL12,ADIPOR1,ADIPOR1,BTG2	BTG2	NA	NA	NA	NA	BTG2	12634	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	204053773	204053963	204053834	Y	NA	SOX13	NA	NA	NA	NA	SOX13	13530	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	205709805	205710150	205710085	Y	NA	NUCKS1,RAB7L1	NA	NA	NA	NA	NUCKS1	7254	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	206291821	206292027	206291912	Y	NA	NA	NA	NA	NA	NA	AVPR1B	69845	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	208136912	208137268	208137107	Y	NA	NA	CD34,LOC148696,MIR29B2,MIR29C,PLXNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CD46	213510	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	212731490	212732709	212732386	Y	NA	ATF3	ATF3	K562,MCF7	ChIA-PET	22265404	ATF3	3967	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr1	212854473	212854873	212854553	Y	RPS6KC1,ATF3,ATF3	BATF3	NA	NA	NA	NA	BATF3	16454	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	214162828	214163073	214162948	Y	PROX1	PROX1	NA	NA	NA	NA	PROX1	8304	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr1	216774004	216774285	216774188	Y	ESRRG,ESRRG	NA	NA	NA	NA	NA	USH2A	179266	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	220399770	220399931	220399853	Y	NA	RAB3GAP2	NA	NA	NA	NA	RAB3GAP2	43865	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	221882292	221882723	221882499	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	30795	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	221916049	221916599	221916319	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	2531	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	223356140	223356312	223356226	Y	NA	NA	CAPN8,SUSD4	IMR90	Hi-C	24141950	SUSD4	179232	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	224180261	224180516	224180350	Y	NA	NA	NA	NA	NA	NA	FBXO28	119273	CAGE	NCI-H1385	hg19	FANTOM5	7.03645486260395
chr1	224633276	224633598	224633406	Y	NA	CNIH3,WDR26	WDR26,FBXO28,CNIH4	IMR90	Hi-C	24141950	WDR26	10541	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	224690718	224691054	224690869	Y	WDR26	NA	CNIH3	IMR90	Hi-C	24141950	WDR26	67983	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	226189681	226190319	226189910	Y	H3F3A,C1orf55	NA	NA	NA	NA	NA	H3F3A	57233	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr1	226190534	226190731	226190643	Y	H3F3A,C1orf55	NA	NA	NA	NA	NA	H3F3A	56821	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr1	226297611	226298113	226297674	Y	NA	NA	ACBD3,C1orf55,H3F3A,LIN9	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	H3F3A	50059	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	226315631	226315825	226315781	Y	PARP1,LIN9,PYCR2	NA	NA	NA	NA	NA	ACBD3	56606	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	226867580	226868182	226867972	Y	ITPKB	NA	NA	NA	NA	NA	PSEN2	187703	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	226890865	226891416	226891300	Y	ITPKB	NA	NA	NA	NA	NA	PSEN2	164469	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	227953974	227954299	227954123	Y	IBA57	SNAP47,JMJD4	NA	NA	NA	NA	JMJD4	32862	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr1	227976197	227976490	227976208	Y	NA	NA	NA	NA	NA	NA	JMJD4	55085	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr1	228783962	228784250	228784107	Y	NA	NA	NA	NA	NA	NA	RHOU	84574	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	229074291	229074557	229074548	Y	NA	NA	RHOU	IMR90	Hi-C	24141950	RHOU	205467	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	229206013	229206222	229206093	Y	RHOU	NA	RHOU	IMR90	Hi-C	24141950	RP5-1061H20.4	198553	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	229357329	229357959	229357668	Y	RAB4A	RP5-1061H20.4,RAB4A	RHOU,C1orf96	IMR90	Hi-C	24141950	RP5-1061H20.4	46816	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	230561990	230562633	230562303	Y	NA	NA	NA	NA	NA	NA	COG2	213602	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr1	230887462	230887658	230887571	Y	NA	NA	NA	NA	NA	NA	COG2	111227	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	230889321	230889962	230889601	Y	NA	NA	NA	NA	NA	NA	COG2	113086	CAGE	NCI-H1385	hg19	FANTOM5	6.25462654453684
chr1	232746522	232746891	232746785	Y	NA	NA	TSNAX-DISC1,SIPA1L2	IMR90	Hi-C	24141950	NTPCR	337460	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	232765644	232766127	232765957	Y	NA	NA	TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2	IMR90	Hi-C	24141950	NTPCR	318224	CAGE	NCI-H1385	hg19	FANTOM5	35.9641026310869
chr1	233250723	233251216	233250828	Y	NA	NA	NA	NA	NA	NA	NTPCR	166372	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	234728712	234729023	234728867	Y	NA	IRF2BP2	NA	NA	NA	NA	IRF2BP2	14248	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	234738546	234738834	234738624	Y	IRF2BP2	IRF2BP2	NA	NA	NA	NA	IRF2BP2	4437	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	234746093	234747674	234747395	Y	IRF2BP2	IRF2BP2	NA	NA	NA	NA	IRF2BP2	2822	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	234748100	234748931	234748566	Y	IRF2BP2	IRF2BP2	NA	NA	NA	NA	IRF2BP2	4829	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	235108971	235109355	235109264	Y	NA	NA	IRF2BP2,LOC100506810,LINC00184,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TOMM20	180896	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	235246558	235246857	235246620	Y	ARID4B,ARID4B	TOMM20	IRF2BP2	MCF7,K562	ChIA-PET	22265404	TOMM20	43394	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	235267591	235267744	235267678	Y	NA	TOMM20	NA	NA	NA	NA	TOMM20	22507	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	235644219	235644255	235644237	Y	NA	B3GALNT2	NA	NA	NA	NA	B3GALNT2	21526	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	236231203	236231484	236231380	Y	NA	NID1	NID1	IMR90	Hi-C	24141950	NID1	4741	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	237634251	237634535	237634324	Y	NA	NA	NA	NA	NA	NA	RYR2	430746	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	240308546	240308862	240308776	Y	NA	NA	NA	NA	NA	NA	FMN2	132898	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	241390681	241391063	241391027	Y	RGS7	NA	NA	NA	NA	NA	RGS7	127467	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr1	241771916	241772216	241772151	Y	KMO	NA	NA	NA	NA	NA	OPN3	66462	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	241804319	241804678	241804577	Y	NA	OPN3	NA	NA	NA	NA	OPN3	34000	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr1	243585242	243585384	243585313	Y	CEP170,AKT3,AKT3	NA	NA	NA	NA	NA	SDCCAG8	167922	CAGE	NCI-H1385	hg19	FANTOM5	7.03645486260395
chr1	245563795	245563810	245563803	Y	KIF26B	NA	NA	NA	NA	NA	KIF26B	247508	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr1	247035132	247035504	247035470	Y	CNST,ZNF669,AHCTF1	NA	NA	NA	NA	NA	AHCTF1	57776	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	556579	556951	556668	Y	ZMYND11,DIP2C	NA	NA	NA	NA	NA	DIP2C	176732	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	830510	830663	830589	Y	NA	NA	DIP2C	MCF7	ChIA-PET	22265404	DIP2C	96827	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	975785	976368	976035	Y	NA	LARP4B	DIP2C,LARP4B,GTPBP4,IDI1,IDI2-AS1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	LARP4B	221	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	3528683	3528786	3528735	Y	NA	NA	LOC100216001,LOC338588,KLF6	IMR90	Hi-C	24141950	KLF6	296687	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	5045021	5045414	5045392	Y	AKR1C2	AKR1C2,AKR1C3	NA	NA	NA	NA	AKR1C2	12809	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	5113786	5114179	5114065	Y	AKR1C1,AKR1C2,AKR1C3	AKR1C3	NA	NA	NA	NA	AKR1C3	38240	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr10	7277177	7277507	7277289	Y	ITIH2	NA	NA	NA	NA	NA	KIN	550483	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	10413071	10413088	10413080	Y	NA	NA	NA	NA	NA	NA	USP6NL	1238665	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	12527553	12527985	12527598	Y	CAMK1D	NA	NA	NA	NA	NA	CAMK1D	138072	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	15278281	15278573	15278465	Y	NA	NA	NA	NA	NA	NA	FAM171A1	132488	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	20518444	20518755	20518482	Y	PLXDC2	NA	NA	NA	NA	NA	PLXDC2	415276	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	21436057	21436346	21436225	Y	C10orf113,NEBL	NEBL	NA	NA	NA	NA	NEBL	24770	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	22629825	22629981	22629966	Y	DNAJC1	COMMD3,BMI1,SPAG6	NA	NA	NA	NA	SPAG6	2418	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	22725331	22726270	22725901	Y	NA	NA	NA	NA	NA	NA	SPAG6	92932	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr10	22726811	22727194	22727116	Y	NA	NA	NA	NA	NA	NA	SPAG6	94412	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	25240272	25240935	25240716	Y	ARHGAP21,THNSL1,GPR158,PRTFDC1	PRTFDC1	NA	NA	NA	NA	PRTFDC1	739	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr10	27531769	27532240	27532024	Y	ABI1,ANKRD26,YME1L1,MASTL,ACBD5	ACBD5	NA	NA	NA	NA	ACBD5	2710	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	28622853	28623578	28623396	Y	NA	MPP7	MPP7	IMR90	Hi-C	24141950	MPP7	1438	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	28957755	28957993	28957831	Y	BAMBI	BAMBI	BAMBI	K562	ChIA-PET	22265404	BAMBI	6278	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr10	31892273	31892723	31892643	Y	NA	NA	ZEB1	IMR90	Hi-C	24141950	ZEB1-AS1	284897	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	32047879	32048374	32048138	Y	ZEB1	NA	ZNF438,ZEB1,ARHGAP12	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	167368	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	32048872	32049424	32049213	Y	ZEB1,KIF5B	NA	ZNF438,ZEB1,ARHGAP12,LYZL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	166318	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr10	32626420	32626786	32626539	Y	NA	EPC1	NA	NA	NA	NA	EPC1	38940	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	32639699	32640002	32639940	Y	NA	EPC1	EPC1,C10orf68	IMR90	Hi-C	24141950	EPC1	25724	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	33562254	33562552	33562425	Y	ITGB1,ITGB1,NRP1	NA	NA	NA	NA	NA	NRP1	60638	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	33625950	33626342	33626167	Y	NA	NRP1	NA	NA	NA	NA	NRP1	2760	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	47034323	47034345	47034334	Y	NA	NA	NA	NA	NA	NA	FAM21C	813675	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	47149103	47149407	47149372	Y	NA	NA	NA	NA	NA	NA	FAM21C	928455	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	47655672	47656071	47655889	Y	NA	NA	AGAP7	MCF7	ChIA-PET	22265404	ZNF488	696953	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	60727421	60727594	60727472	Y	PHYHIPL,PHYHIPL,FAM13C,FAM13C	NA	NA	NA	NA	NA	PHYHIPL	206756	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	63657527	63657737	63657668	Y	ARID5B	NA	C10orf107,ARID5B	IMR90	Hi-C	24141950	RTKN2	368729	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	63663540	63663817	63663641	Y	ARID5B	NA	NA	NA	NA	NA	RTKN2	362649	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	71657953	71658245	71658099	Y	H2AFY2	NA	NA	NA	NA	NA	H2AFY2	152307	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	73620184	73620641	73620392	Y	DNAJB12,DDIT4,C10orf54,PSAP	PSAP	PSAP,C10orf54,CDH23,CHST3	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PSAP	11058	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	74091661	74092150	74091920	Y	PSAP,DDIT4,DNAJB12	DNAJB12	NA	NA	NA	NA	DNAJB12	20838	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	75361338	75361489	75361457	Y	NA	NA	USP54,PPP3CB,BMS1P4,SEC24C,SYNPO2L,MYOZ1,CHCHD1,TTC18,C10orf103	IMR90	Hi-C	24141950	AGAP5	94150	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	75805462	75805520	75805491	Y	NA	VCL	NA	NA	NA	NA	VCL	49590	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	79006844	79007202	79006984	Y	NA	NA	NA	NA	NA	NA	KCNMA1	389151	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	80166856	80166996	80166943	Y	NA	NA	LOC283050,ZMIZ1,RPS24,LOC100132987	IMR90	Hi-C	24141950	RPS24	375338	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	81946319	81946704	81946639	Y	ANXA11	ANXA11	NA	NA	NA	NA	ANXA11	16624	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	88471302	88471860	88471725	Y	LDB3,LDB3,LDB3	BMPR1A	NA	NA	NA	NA	BMPR1A	42547	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	94351391	94351691	94351485	Y	CPEB3	IDE,KIF11	NA	NA	NA	NA	KIF11	348	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr10	98471163	98471312	98471235	Y	LCOR,TM9SF3,PIK3AP1	PIK3AP1,RPL13AP5	NA	NA	NA	NA	PIK3AP1	6959	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	98638142	98638499	98638253	Y	NA	LCOR	NA	NA	NA	NA	LCOR	48125	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	103877464	103877788	103877718	Y	MGEA5,TMEM180,SUFU,PSD,FBXL15,C10orf76,LDB1	LDB1,PPRC1,NOLC1	NA	NA	NA	NA	LDB1	422	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	104401686	104402330	104401988	Y	NA	NA	NA	NA	NA	NA	TRIM8	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	106065731	106065880	106065781	Y	NA	GSTO2	NA	NA	NA	NA	GSTO2	39100	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	112402938	112403137	112402952	Y	NA	RBM20	NA	NA	NA	NA	RBM20	783	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	115719262	115719399	115719345	Y	NA	NA	ADRB1,NHLRC2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ADRB1	82407	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	116259358	116259612	116259525	Y	C10orf118,ABLIM1	NA	NA	NA	NA	NA	ABLIM1	183150	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	123626359	123626403	123626376	Y	NA	NA	NA	NA	NA	NA	ATE1-AS1	59424	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	123873239	123873409	123873290	Y	NA	NA	NA	NA	NA	NA	TACC2	126550	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr10	123914446	123914761	123914722	Y	NA	NA	NA	NA	NA	NA	TACC2	167757	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr10	123923874	123924133	123924069	Y	NA	NA	NA	NA	NA	NA	TACC2	177185	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr10	124636899	124637143	124637021	Y	NA	FAM24B,RP11-564D11.3	NA	NA	NA	NA	FAM24B	14	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	126840629	126841204	126840953	Y	NA	CTBP2	NA	NA	NA	NA	CTBP2	6535	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr10	133879247	133879524	133879406	Y	NA	NA	BNIP3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BNIP3	85812	CAGE	NCI-H1385	hg19	FANTOM5	7.81828318067106
chr10	134122010	134122092	134122081	Y	NA	STK32C,LRRC27	DPYSL4	IMR90	Hi-C	24141950	STK32C	21259	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	134260341	134260546	134260485	Y	C10orf91	NA	NA	NA	NA	NA	PWWP2B	51669	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr10	134266616	134267060	134266753	Y	LRRC27,LRRC27,PWWP2B,INPP5A,C10orf92	NA	NA	NA	NA	NA	PWWP2B	57944	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	355877	356724	356385	Y	NA	B4GALNT4	IFITM1,IFITM2,RIC8A,BET1L,ATHL1,PKP3	K562,MCF7	ChIA-PET	22265404	B4GALNT4	11072	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	1404202	1404317	1404259	Y	IFITM10,DUSP8	BRSK2	TOLLIP,LOC255512,MUC5B,BRSK2,MOB2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BRSK2	4812	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	1568333	1568421	1568379	Y	BRSK2,KRTAP5-3,DUSP8	DUSP8	NA	NA	NA	NA	DUSP8	22729	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	2717684	2718130	2717946	Y	TSSC4,TRPM5,KCNQ1	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	1094	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	8973817	8973979	8973898	Y	NA	ST5,AKIP1,TMEM9B-AS1,TMEM9B,NRIP3,RP11-467K18.2	C11orf16	IMR90	Hi-C	24141950	TMEM9B-AS1	10243	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	9385760	9386326	9386092	Y	ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7	IPO7	ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IPO7	17843	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr11	10373632	10373924	10373723	Y	NA	ADM	SBF2,MRVI1,MRVI1-AS1,ADM,LOC283104	IMR90	Hi-C	24141950	ADM	49405	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	10373965	10374241	10374089	Y	LYVE1,EIF4G2	ADM	SBF2,MRVI1,MRVI1-AS1,ADM,LOC283104	IMR90	Hi-C	24141950	ADM	49738	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	10955517	10955651	10955533	Y	NA	NA	EIF4G2,MICALCL,CTR9,GALNTL4,LOC729013,ZBED5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZBED5	77174	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	12214399	12214709	12214476	Y	NA	NA	NA	NA	NA	NA	MICAL2	100856	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr11	12697923	12698543	12698251	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	3954	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	13986123	13986466	13986328	Y	SPON1	SPON1	NA	NA	NA	NA	SPON1	4209	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	17374298	17375700	17374969	Y	RPS13,B7H6	KCNJ11	NA	NA	NA	NA	KCNJ11	33178	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	19957110	19957424	19957380	Y	NAV2	NA	NA	NA	NA	NA	PRMT3	449652	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	27657269	27657593	27657433	Y	NA	NA	NA	NA	NA	NA	LIN7C	130949	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	27739901	27740316	27740092	Y	BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF	NA	NA	NA	NA	NA	RP11-1033A18.1	170264	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr11	33427027	33427076	33427050	Y	NA	NA	C11orf41,C11orf91	IMR90	Hi-C	24141950	HIPK3	150809	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	36442519	36442687	36442604	Y	COMMD9,PRR5L,PRR5L,TRAF6	NA	NA	NA	NA	NA	TRAF6	87135	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	46143609	46143973	46143928	Y	NA	PHF21A	NA	NA	NA	NA	PHF21A	2624	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	47789923	47790126	47789984	Y	NA	FNBP4	NA	NA	NA	NA	FNBP4	2928	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	60809729	60810107	60810025	Y	SDHAF2,CD5,CD6	NA	NA	NA	NA	NA	VPS37C	116982	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	62211626	62212261	62212170	Y	FTH1,STX5,SLC3A2,NXF1,EML3,AHNAK	NA	NA	NA	NA	NA	ASRGL1	108706	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	65184888	65185395	65184991	Y	FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	2850	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	65185589	65187086	65186338	Y	NA	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	1159	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	65187297	65188198	65187553	Y	BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	47	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr11	65239550	65239870	65239751	Y	BATF2,FAU,CDC42EP2,KCNK7,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1	TIGD3,SCYL1	K562	ChIA-PET	22265404	AP000769.1	18822	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr11	65244638	65245303	65245021	Y	BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1,SCYL1	SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MALAT1	17930	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr11	65246279	65246484	65246387	Y	SCYL1,LTBP3,EFEMP2	AP000769.1,MALAT1,SCYL1	SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MALAT1	16749	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	65259217	65259522	65259389	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1	IMR90	Hi-C	24141950	MALAT1	3711	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	65264635	65265953	65265057	Y	NA	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	1402	CAGE	NCI-H1385	hg19	FANTOM5	8.60011149873816
chr11	66717584	66717809	66717709	Y	CLCF1,ADRBK1	PC	NA	NA	NA	NA	PC	6038	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	68147876	68148306	68148095	Y	NA	NA	NA	NA	NA	NA	LRP5	69799	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr11	68611298	68611611	68611498	Y	NA	CPT1A	NA	NA	NA	NA	CPT1A	1420	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr11	68924761	68925032	68924956	Y	TPCN2	NA	ORAOV1,CCND1,MYEOV	IMR90	Hi-C	24141950	TPCN2	110396	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	75059269	75059623	75059491	Y	NA	ARRB1,RPS3	NA	NA	NA	NA	ARRB1	1250	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	75270235	75270345	75270334	Y	NA	SERPINH1	NA	NA	NA	NA	SERPINH1	756	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	75919893	75920246	75919996	Y	WNT11	WNT11	NA	NA	NA	NA	WNT11	113	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr11	76480789	76480971	76480905	Y	NA	TSKU,RP11-21L23.3	B3GNT6,TSKU,GUCY2E,ACER3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TSKU	10324	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr11	88276753	88276819	88276788	Y	NA	NA	NA	NA	NA	NA	CTSC	207798	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	92504926	92505284	92505105	Y	NA	NA	NA	NA	NA	NA	SLC36A4	423846	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	112833069	112833192	112833175	Y	NCAM1	NCAM1	NA	NA	NA	NA	NCAM1	3072	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	118782911	118783378	118783221	Y	SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84	BCL9L	NA	NA	NA	NA	BCL9L	10939	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	123381868	123382248	123382089	Y	SCN3B,GRAMD1B	GRAMD1B	GRAMD1B	IMR90	Hi-C	24141950	GRAMD1B	12096	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	123519920	123520232	123520133	Y	OR8D4,SCN3B	SCN3B	NA	NA	NA	NA	SCN3B	3720	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	123957354	123957540	123957459	Y	SCN3B,OR6M1,TMEM225,OR8D1,VWA5A	VWA5A	OR8G1	IMR90	Hi-C	24141950	VWA5A	26529	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	124111920	124112038	124111963	Y	TMEM225,SPA17	NA	NA	NA	NA	NA	VWA5A	127851	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr11	124351758	124352356	124352073	Y	NA	NA	OR10G9,PANX3,TBRG1	IMR90	Hi-C	24141950	TBRG1	138376	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	129723853	129724184	129723902	Y	NFRKB	TMEM45B,NFRKB	NA	NA	NA	NA	NFRKB	39301	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	130392180	130392594	130392285	Y	NA	NA	SNX19,ADAMTS15	IMR90	Hi-C	24141950	ADAMTS15	75311	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr11	130506997	130507161	130507118	Y	NA	NA	ADAMTS15,ADAMTS8	IMR90	Hi-C	24141950	ADAMTS15	190128	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr11	133920876	133920983	133920947	Y	B3GAT1,SPATA19,JAM3	RP11-713P17.3,JAM3	NA	NA	NA	NA	JAM3	15837	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	1714275	1714637	1714592	Y	NA	FBXL14	FBXL14,RAD52,ERC1,WNT5B,WNK1	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	FBXL14	12944	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	2144277	2144357	2144308	Y	LRTM2	DCP1B,RP5-1096D14.6	CACNA1C,MIR3649,CACNA2D4,ADIPOR2,DCP1B,LOC100652846,WNT5B	IMR90	Hi-C	24141950	RP5-1096D14.6	32445	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	2432824	2433067	2432925	Y	NA	NA	NA	NA	NA	NA	RP5-1096D14.6	320992	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	6444583	6445131	6444861	Y	CD4,CD4,TNFRSF1A	PLEKHG6,TNFRSF1A,SCNN1A	NA	NA	NA	NA	TNFRSF1A	4149	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	6539566	6540029	6539921	Y	NA	RP1-102E24.9,CD27-AS1,TAPBPL,VAMP1	NA	NA	NA	NA	RP1-102E24.9	5635	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr12	6721904	6722326	6722186	Y	GPR162,ENO2,C12orf53	NOP2,CHD4,ACRBP,ING4	NA	NA	NA	NA	CHD4	7262	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	6854848	6855156	6854990	Y	TAPBPL,VAMP1,CHD4,ZNF384,PTPN6,CD4,CD4	COPS7A,PTMS,MLF2	NA	NA	NA	NA	PTMS	17526	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	6901890	6902092	6902006	Y	TAPBPL,IFFO1,CHD4,ING4,ZNF384,ZNF384,PTPN6,CD4,CD4	PTMS,MLF2,GPR162,LEPREL2	NA	NA	NA	NA	GPR162	26619	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	7000184	7000641	7000294	Y	PEX5,VAMP1,ACRBP,CD4,CD4,PTPN6	CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2,ENO2,ATN1,C12orf57	NA	NA	NA	NA	SPSB2	3662	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr12	7058106	7058233	7058157	Y	ACSM4,VAMP1,ZNF384,ZNF384,CD4,CD4,LRRC23,PTPN6	ENO2,ATN1,C12orf57,RNU7-1,EMG1,U47924.27,PHB2,C1S	NA	NA	NA	NA	RNU7-1	7127	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	7592182	7592797	7592685	Y	PEX5,NANOG	RP11-157G21.2	NA	NA	NA	NA	RP11-157G21.2	1596	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	8179132	8179551	8179335	Y	NA	FOXJ2	PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXJ2	3748	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	8840377	8840836	8840579	Y	RIMKLB	RIMKLB	RIMKLB	MCF7	ChIA-PET	22265404	RIMKLB	8181	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	9271887	9272280	9271908	Y	NA	NA	PZP	IMR90	Hi-C	24141950	M6PR	171336	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	9895387	9895495	9895395	Y	NA	NA	NA	NA	NA	NA	RP11-705C15.4	96782	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	10517487	10517775	10517755	Y	NA	RP11-277P12.20,KLRC4-KLRK1	NA	NA	NA	NA	RP11-277P12.20	3119	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	12255233	12255559	12255327	Y	BCL2L14	NA	NA	NA	NA	NA	LRP6	162387	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	13253893	13254547	13254171	Y	CDKN1B,EMP1	NA	NA	NA	NA	NA	KIAA1467	58675	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	19496981	19496995	19496989	Y	NA	NA	NA	NA	NA	NA	AEBP2	57984	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	22779557	22779668	22779574	Y	NA	ETNK1	NA	NA	NA	NA	ETNK1	3548	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	25538390	25538869	25538521	Y	NA	NA	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KRAS	136520	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	25539082	25539407	25539207	Y	NA	NA	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KRAS	137212	CAGE	NCI-H1385	hg19	FANTOM5	13.2910814071408
chr12	26944008	26944360	26944283	Y	STK38L,C12orf71	ITPR2	NA	NA	NA	NA	ITPR2	39771	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	28501330	28501622	28501413	Y	NA	NA	NA	NA	NA	NA	RP11-967K21.1	160031	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	29844514	29844723	29844664	Y	NA	NA	NA	NA	NA	NA	TMTC1	90969	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	29859887	29860252	29860216	Y	NA	NA	NA	NA	NA	NA	TMTC1	75440	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	31804886	31805136	31805063	Y	NA	METTL20	NA	NA	NA	NA	METTL20	6792	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	31902136	31902566	31902240	Y	C12orf35,AMN1,H3F3C	AMN1,H3F3C	AMN1	K562	ChIA-PET	22265404	AMN1	22028	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	39800065	39800203	39800134	Y	NA	KIF21A	NA	NA	NA	NA	KIF21A	34989	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	46272544	46272693	46272552	Y	ARID2,SLC38A1,SCAF11	NA	NA	NA	NA	NA	SCAF11	111210	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	47058808	47059020	47058972	Y	SLC38A2	NA	SLC38A2,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	283346	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	47074564	47074850	47074707	Y	NA	NA	SLC38A1,SLC38A2,SLC38A4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	299102	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	47263284	47263605	47263445	Y	NA	NA	SLC38A1,SLC38A4,RPAP3	IMR90	Hi-C	24141950	AMIGO2	208129	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	47474423	47475249	47474825	Y	NA	AMIGO2	NA	NA	NA	NA	AMIGO2	2689	CAGE	NCI-H1385	hg19	FANTOM5	10.1637681348724
chr12	47482441	47482676	47482559	Y	NA	AMIGO2	AMIGO2	K562	ChIA-PET	22265404	AMIGO2	10707	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	47701468	47701752	47701723	Y	NA	NA	AMIGO2,MIR4698,LOC100233209,FAM113B	IMR90	Hi-C	24141950	AMIGO2	229734	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	49592771	49592915	49592838	Y	NA	TUBA1C,TUBA1A	TUBA1B,PRPH,TUBA1A,TUBA1C,LMBR1L,DHH	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	TUBA1A	11664	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	49595765	49596022	49595888	Y	LMBR1L	TUBA1C,TUBA1A	TUBA1A,TUBA1B	MCF7,K562	ChIA-PET	22265404	TUBA1A	14658	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr12	49626851	49627096	49626872	Y	NA	TUBA1C,TUBA1A	DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TUBA1A	45744	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	49628278	49628526	49628405	Y	LMBR1L,TUBA1A	TUBA1C,TUBA1A	DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TUBA1A	47171	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr12	49739970	49740063	49739997	Y	NA	TROAP,C1QL4,DNAJC22,SPATS2	NA	NA	NA	NA	DNAJC22	1270	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	52426547	52427164	52426822	Y	NR4A1,ACVR1B,ACVR1B,GRASP	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	11931	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	53273269	53273433	53273418	Y	NA	NA	NA	NA	NA	NA	KRT18	67222	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	54746110	54746353	54746239	Y	PDE1B,GPR84	NA	NA	NA	NA	NA	COPZ1	53124	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	54752671	54753884	54753119	Y	NCKAP1L,ITGA5,ZNF385A,GPR84	NA	NA	NA	NA	NA	COPZ1	59685	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	57028610	57029302	57028864	Y	NA	BAZ2A,ATP5B	NA	NA	NA	NA	BAZ2A	10	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	57735992	57736374	57736348	Y	NA	NA	R3HDM2	IMR90	Hi-C	24141950	R3HDM2	86414	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr12	58281637	58282038	58281777	Y	CDK4,METTL1,METTL21B,TSFM	CTDSP2,RP11-620J15.3	CTDSP2,TSFM,AVIL	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTDSP2	43115	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	58283417	58283685	58283602	Y	AGAP2,TSPAN31,CDK4,METTL1,METTL21B,TSFM,CTDSP2	CTDSP2,RP11-620J15.3,XRCC6BP1	CTDSP2,TSFM,AVIL	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-620J15.3	44273	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	63096065	63096306	63096205	Y	USP15,C12orf61	NA	NA	NA	NA	NA	RP11-631N16.2	101533	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	63240359	63240641	63240456	Y	NA	NA	NA	NA	NA	NA	PPM1H	86176	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	65013818	65014124	65014036	Y	TBK1,RASSF3,GNS	RASSF3	NA	NA	NA	NA	RASSF3	11525	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	67404997	67405349	67405173	Y	NA	NA	NA	NA	NA	NA	RP11-123O10.4	55593	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	69036661	69037118	69036873	Y	NA	RAP1B,RP11-254B13.3,NUP107	NA	NA	NA	NA	RP11-254B13.3	1888	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr12	69724869	69725108	69724964	Y	LYZ	YEATS4	YEATS4	K562	ChIA-PET	22265404	YEATS4	26375	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	82350374	82350688	82350420	Y	CCDC59	NA	NA	NA	NA	NA	PPFIA2	199042	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	83157091	83157416	83157138	Y	NA	NA	NA	NA	NA	NA	TMTC2	78432	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	86658149	86658358	86658243	Y	NA	NA	NA	NA	NA	NA	NTS	392076	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	88828245	88828424	88828303	Y	NA	NA	KITLG	IMR90	Hi-C	24141950	KITLG	144204	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	91775053	91775433	91775292	Y	NA	NA	LOC256021,C12orf12,EPYC,DCN,CLLU1OS,CLLU1,C12orf74	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	BTG1	762240	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	92517978	92518398	92518142	Y	BTG1	BTG1	NA	NA	NA	NA	BTG1	19275	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	94581330	94581746	94581508	Y	TMCC3,PLXNC1	PLXNC1	CCDC41	IMR90	Hi-C	24141950	PLXNC1	40831	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	94919144	94919451	94919150	Y	NA	NA	PLXNC1	IMR90	Hi-C	24141950	CCDC41	67380	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	95939436	95939751	95939594	Y	NA	USP44	NA	NA	NA	NA	USP44	3515	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	98186256	98186389	98186323	Y	NA	NA	NA	NA	NA	NA	TMPO	720901	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	98487338	98487732	98487536	Y	NA	NA	NA	NA	NA	NA	TMPO	419558	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	110618684	110618848	110618757	Y	NA	NA	NA	NA	NA	NA	IFT81	58544	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	112341708	112342051	112341878	Y	ATXN2,BRAP,MAPKAPK5,NAA25,C12orf51,TMEM116	NA	NA	NA	NA	NA	MAPKAPK5	63926	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	113630509	113630869	113630677	Y	NA	DDX54,TPCN1,IQCD	NA	NA	NA	NA	DDX54	9225	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	114029271	114029455	114029396	Y	LHX5	NA	RBM19	IMR90	Hi-C	24141950	SDSL	171229	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	115130244	115130426	115130316	Y	TBX3	TBX3	TBX3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBX3	10275	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	115889491	115890073	115889778	Y	NA	NA	TBX3	IMR90	Hi-C	24141950	TBX3	769522	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	116701070	116701373	116701314	Y	MAP1LC3B2,MED13L	MED13L	NA	NA	NA	NA	MED13L	11770	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr12	116796896	116797249	116796984	Y	NA	NA	MED13L,MIR4472-2,LINC00173,MAP1LC3B2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MED13L	83753	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	118123457	118123641	118123524	Y	NA	NA	NA	NA	NA	NA	KSR2	281147	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	118313927	118314150	118314016	Y	NA	NA	NA	NA	NA	NA	KSR2	90638	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	119646482	119646796	119646670	Y	SRRM4,CCDC60,HSPB8	HSPB8	NA	NA	NA	NA	HSPB8	32035	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	120426531	120426889	120426594	Y	NA	NA	NA	NA	NA	NA	CIT	113436	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr12	120912483	120912692	120912652	Y	NA	COX6A1,TRIAP1,GATC,SRSF9,DYNLL1	NA	NA	NA	NA	DYNLL1	6830	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	121322345	121322363	121322358	Y	NA	SPPL3	NA	NA	NA	NA	SPPL3	17811	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	121715307	121715461	121715407	Y	OASL,P2RX7,P2RX4,CAMKK2	CAMKK2	NA	NA	NA	NA	CAMKK2	18650	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	122020162	122020238	122020212	Y	RNF34,SETD1B,ORAI1,KDM2B,KDM2B	KDM2B,ORAI1	NA	NA	NA	NA	KDM2B	3242	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	122908043	122908483	122908329	Y	ZCCHC8,DENR,CLIP1	CLIP1	NA	NA	NA	NA	CLIP1	2864	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr12	125027797	125027993	125027883	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	22142	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	125117108	125117622	125117163	Y	NCOR2	NA	NCOR2,ZNF664-FAM101A	IMR90	Hi-C	24141950	NCOR2	66973	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	125347630	125347766	125347649	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	17448	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	125404545	125404922	125404790	Y	UBC	SCARB1,UBC	NCOR2,SCARB1,UBC	IMR90	Hi-C	24141950	UBC	4631	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	125424077	125424667	125424516	Y	NA	UBC,DHX37	UBC	IMR90	Hi-C	24141950	UBC	24163	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	127567979	127568114	127568034	Y	NA	RP11-575F12.1	NA	NA	NA	NA	RP11-575F12.1	25033	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	127942413	127942644	127942529	Y	NA	NA	NA	NA	NA	NA	AC079949.1	293741	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	131117194	131117823	131117569	Y	RIMBP2	NA	NA	NA	NA	NA	RIMBP2,RP11-662M24.2	81003	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	131513179	131513358	131513281	Y	GPR133	RP11-76C10.5	NA	NA	NA	NA	RP11-76C10.5	36658	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr12	132315038	132315239	132315115	Y	MMP17	MMP17	NA	NA	NA	NA	MMP17	4100	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr13	22249294	22249707	22249608	Y	FGF9	RPS7P10,FGF9	NA	NA	NA	NA	FGF9	5772	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr13	22249979	22250230	22250030	Y	NA	RPS7P10,FGF9	NA	NA	NA	NA	FGF9	6457	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	24062649	24062979	24062814	Y	NA	NA	NA	NA	NA	NA	SACS	56808	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	25485313	25485583	25485398	Y	PARP4,PABPC3,NUPL1,MTMR6	CENPJ	NA	NA	NA	NA	CENPJ	9435	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	27957593	27957812	27957644	Y	RASL11A,GTF3A	GTF3A	CDX2,GSX1	IMR90	Hi-C	24141950	GTF3A	38869	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	31407198	31407336	31407268	Y	HSPH1	NA	USPL1	IMR90	Hi-C	24141950	USPL1	217368	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr13	34731212	34731445	34731362	Y	NA	NA	NA	NA	NA	NA	RFC3	341026	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	36728930	36729180	36728956	Y	DCLK1,SPG20,DCLK1	NA	NA	NA	NA	NA	SPG20	213137	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr13	40344833	40345034	40344934	Y	NA	NA	NA	NA	NA	NA	COG6	117069	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	45629728	45629998	45629866	Y	KCTD4	NA	NA	NA	NA	NA	GTF2F2	62652	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	46244354	46244716	46244645	Y	NA	NA	NA	NA	NA	NA	SIAH3	179155	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	46747616	46748160	46748034	Y	C13orf18,LCP1	LRRC63	NA	NA	NA	NA	LRRC63	35923	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	60338539	60338813	60338676	Y	NA	NA	NA	NA	NA	NA	DIAPH3	397308	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	64652316	64652644	64652373	Y	NA	LINC00355	NA	NA	NA	NA	LINC00355	4172	CAGE	NCI-H1385	hg19	FANTOM5	7.03645486260395
chr13	67461334	67461726	67461614	Y	PCDH9	NA	NA	NA	NA	NA	PCDH9	340742	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	72206339	72206570	72206525	Y	DACH1	NA	NA	NA	NA	NA	DACH1	232760	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	72996613	72996915	72996766	Y	NA	NA	NA	NA	NA	NA	RPL21P110	278916	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	74709487	74710034	74709735	Y	KLF12	KLF12	NA	NA	NA	NA	KLF12	3093	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	77898193	77898346	77898226	Y	NA	MYCBP2	NA	NA	NA	NA	MYCBP2	839	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	88259012	88259340	88259160	Y	NA	NA	NA	NA	NA	NA	SLITRK6	1887389	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr13	88345046	88345403	88345227	Y	NA	NA	NA	NA	NA	NA	SLITRK6	1973423	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	88384592	88384886	88384741	Y	NA	NA	NA	NA	NA	NA	SLITRK6	2012969	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	90486324	90486483	90486404	Y	NA	NA	NA	NA	NA	NA	MIR17HG	1511591	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	95201580	95202169	95201893	Y	NA	TGDS,GPR180	NA	NA	NA	NA	TGDS	44342	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	96262046	96262201	96262124	Y	DZIP1	DZIP1	NA	NA	NA	NA	DZIP1	32756	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	97636174	97636720	97636457	Y	NA	NA	NA	NA	NA	NA	MBNL2	234968	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr13	100008605	100009044	100008755	Y	DOCK9,UBAC2,UBAC2,GPR18,GPR183,CLYBL	NA	NA	NA	NA	NA	H2AFZP3	142593	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	102569627	102570054	102569972	Y	NA	NA	NA	NA	NA	NA	FGF14-IT1	474815	CAGE	NCI-H1385	hg19	FANTOM5	42.2187291756237
chr13	102696707	102696889	102696861	Y	NA	NA	NA	NA	NA	NA	FGF14-IT1	347980	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	108099145	108099375	108099322	Y	FAM155A	NA	NA	NA	NA	NA	FAM155A	417708	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	108153519	108153767	108153691	Y	NA	NA	NA	NA	NA	NA	FAM155A	363316	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	108181035	108181120	108181078	Y	NA	NA	NA	NA	NA	NA	FAM155A	335963	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	108238726	108238999	108238876	Y	FAM155A	NA	NA	NA	NA	NA	FAM155A	278084	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	108520131	108520835	108520801	Y	LIG4,FAM155A	FAM155A	NA	NA	NA	NA	FAM155A	3048	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr13	108520964	108521235	108521194	Y	LIG4,FAM155A	FAM155A	NA	NA	NA	NA	FAM155A	3881	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	109568044	109568430	109568179	Y	NA	NA	NA	NA	NA	NA	ABHD13	699317	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	110064831	110065141	110064985	Y	NA	NA	MYO16	IMR90	Hi-C	24141950	IRS2	371774	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	110274718	110274736	110274728	Y	IRS2	NA	MYO16	IMR90	Hi-C	24141950	IRS2	162179	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	110352571	110352699	110352636	Y	NA	NA	MYO16	IMR90	Hi-C	24141950	IRS2	84216	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	110353585	110353767	110353676	Y	NA	NA	MYO16	IMR90	Hi-C	24141950	IRS2	83148	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	110359460	110359633	110359542	Y	IRS2	NA	MYO16,IRS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	IRS2	77282	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	110426988	110427362	110427201	Y	NA	IRS2	NA	NA	NA	NA	IRS2	9553	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	110439676	110440079	110439929	Y	IRS2	IRS2	NA	NA	NA	NA	IRS2	2761	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	110521819	110522258	110522077	Y	NA	NA	MYO16,IRS2,COL4A1	IMR90	Hi-C	24141950	IRS2	84904	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr13	110781860	110782469	110782431	Y	NA	NA	NA	NA	NA	NA	IRS2	344945	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr13	110785109	110785340	110785201	Y	NA	NA	NA	NA	NA	NA	IRS2	348194	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	111589420	111590157	111589779	Y	NA	ANKRD10	ARHGEF7,LINC00346	IMR90	Hi-C	24141950	ANKRD10	24004	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr13	113514166	113514374	113514224	Y	NA	NA	NA	NA	NA	NA	MCF2L-AS1	106764	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	21150605	21151121	21150987	Y	TEP1,TMEM55B,PNP,ZNF219,ARHGEF40	NA	NA	NA	NA	NA	PNP	215492	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	33126424	33126565	33126444	Y	NA	NA	NA	NA	NA	NA	AKAP6	329945	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	34801443	34801630	34801553	Y	NA	NA	SPTSSA	MCF7	ChIA-PET	22265404	SPTSSA	127932	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	36977511	36977654	36977606	Y	MBIP,SFTA3,NKX2-1,NKX2-1	SFTA3,RP11-896J10.3,NKX2-1	NA	NA	NA	NA	SFTA3	3380	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	38054173	38054544	38054319	Y	NA	TTC6,FOXA1	NA	NA	NA	NA	TTC6	8508	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	39559553	39559840	39559693	Y	NA	SEC23A,GEMIN2	NA	NA	NA	NA	SEC23A	17010	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	42075138	42075996	42075609	Y	LRFN5	LRFN5	NA	NA	NA	NA	LRFN5	365	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	42158111	42158422	42158211	Y	LRFN5	NA	NA	NA	NA	NA	LRFN5	83338	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	48109739	48110114	48110083	Y	MDGA2	NA	NA	NA	NA	NA	RPL13AP2	441432	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	50329576	50329987	50329651	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	11655	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	50334846	50335244	50334992	Y	RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6	NEMF,ARF6	SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	16925	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	53020677	53020806	53020735	Y	PTGDR,TXNDC16,GPR137C	TXNDC16,GPR137C	NA	NA	NA	NA	GPR137C	2811	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	54833964	54834357	54834051	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	27210	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	57377264	57377625	57377408	Y	NA	NA	NA	NA	NA	NA	EXOC5	356101	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	58637905	58638297	58638125	Y	NA	ACTR10	NA	NA	NA	NA	ACTR10	26501	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	59656513	59656908	59656842	Y	DAAM1	DAAM1	NA	NA	NA	NA	DAAM1	3149	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	64324216	64324732	64324422	Y	PPP2R5E,WDR89,WDR89,SYNE2	SYNE2	NA	NA	NA	NA	SYNE2	6533	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	65272532	65272626	65272579	Y	NA	NA	NA	NA	NA	NA	SPTB	71975	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	65347160	65347466	65347258	Y	RAB15	SPTB,CHURC1,CHURC1-FNTB,FNTB	SPTB	IMR90	Hi-C	24141950	SPTB	2559	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	71797093	71797681	71797289	Y	PCNX	SIPA1L1	SIPA1L1,LOC145474	IMR90	Hi-C	24141950	SIPA1L1	11927	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	72438276	72438928	72438440	Y	NA	RGS6	NA	NA	NA	NA	RGS6	41120	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	76401422	76401643	76401519	Y	ESRRB,TGFB3	IFT43	NA	NA	NA	NA	IFT43	34943	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	77381505	77381598	77381569	Y	NA	RP11-488C13.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	30412	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	77384980	77385465	77385224	Y	VASH1	RP11-488C13.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	33887	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	77386302	77386621	77386483	Y	IRF2BPL	RP11-488C13.1	IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-488C13.1	35209	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	77396429	77396646	77396562	Y	IRF2BPL	RP11-488C13.1	IRF2BPL,POMT2,GSTZ1,KIAA1737	IMR90	Hi-C	24141950	RP11-488C13.1	45336	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	77466876	77467234	77466958	Y	ZDHHC22,NGB,VASH1,KIAA1737,IRF2BPL	IRF2BPL	NA	NA	NA	NA	IRF2BPL	25800	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	77499482	77500543	77500476	Y	VASH1,C14orf166B,IRF2BPL	IRF2BPL	KIAA1737,POMT2,GSTZ1	MCF7	ChIA-PET	22265404	IRF2BPL	6448	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	81685513	81686063	81685724	Y	GTF2A1,GTF2A1	NA	NA	NA	NA	NA	GTF2A1	0	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr14	89770346	89770725	89770409	Y	FOXN3,FOXN3	NA	NA	NA	NA	NA	FOXN3	312768	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	90167936	90168219	90168049	Y	TDP1,FOXN3,FOXN3	NA	FOXN3,LOC400236,PRO1768,EFCAB11	IMR90	Hi-C	24141950	FOXN3	84443	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	98741028	98741056	98741042	Y	C14orf177	NA	NA	NA	NA	NA	SETD3	1204160	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	100448901	100449138	100448963	Y	NA	NA	EML1,EVL,YY1,DEGS2	IMR90	Hi-C	24141950	DEGS2	175362	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	102227271	102227509	102227387	Y	WDR20,PPP2R5C,PPP2R5C	PPP2R5C	NA	NA	NA	NA	PPP2R5C	1136	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	102414226	102414964	102414565	Y	NA	DYNC1H1	NA	NA	NA	NA	DYNC1H1	13901	CAGE	NCI-H1385	hg19	FANTOM5	8.60011149873816
chr14	102554875	102555215	102555129	Y	HSP90AA1	WDR20,HSP90AA1	NA	NA	NA	NA	WDR20	48625	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	102991046	102991386	102991124	Y	NA	ANKRD9	ANKRD9,RCOR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANKRD9	16910	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr14	105144100	105144955	105144117	Y	GPR132,AKT1	INF2,ADSSL1	NA	NA	NA	NA	INF2	8988	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	105948139	105949025	105948432	Y	NA	CRIP2,C14orf80,TMEM121	NA	NA	NA	NA	C14orf80	5167	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr14	106857348	106857526	106857389	Y	NA	NA	NA	NA	NA	NA	LINC00221	78919	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr15	21905791	21906130	21906013	Y	NA	NA	NA	NA	NA	NA	RP11-603B24.2	637959	CAGE	NCI-H1385	hg19	FANTOM5	13.2910814071408
chr15	25554216	25554517	25554319	Y	NA	NA	NA	NA	NA	NA	UBE3A	127611	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	38954760	38954890	38954768	Y	NA	NA	RASGRP1,FAM98B	IMR90	Hi-C	24141950	FAM98B	210432	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	41199675	41199878	41199759	Y	DLL4	RHOV,VPS18,DLL4,CHAC1	DLL4	IMR90	Hi-C	24141950	VPS18	15047	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	41953918	41954236	41954127	Y	EHD4,MGA	MGA	MAPKBP1	IMR90	Hi-C	24141950	MGA	42496	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr15	44289112	44289501	44289307	Y	NA	NA	NA	NA	NA	NA	PIN4P1	122670	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	49217829	49218211	49218108	Y	SHC4	EID1,SHC4	NA	NA	NA	NA	SHC4	35430	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	50604506	50604513	50604510	Y	NA	GABPB1	NA	NA	NA	NA	GABPB1	41092	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	57465140	57465369	57465208	Y	ZNF280D,TCF12	NA	LOC283663	IMR90	Hi-C	24141950	TCF12	256319	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	57792525	57792857	57792691	Y	NA	NA	NA	NA	NA	NA	POLR2M	89374	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	60835043	60835413	60835301	Y	NA	NA	NA	NA	NA	NA	RP11-219B17.1	65666	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	62574155	62574333	62574245	Y	NA	NA	NA	NA	NA	NA	TLN2	106392	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr15	64748954	64749303	64749001	Y	PLEKHO2,SNX1	ZNF609	NA	NA	NA	NA	ZNF609	1638	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	65713781	65714189	65713985	Y	IGDCC3,IGDCC4	NA	NA	NA	NA	NA	DPP8	93853	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	66163349	66163534	66163463	Y	NA	NA	NA	NA	NA	NA	DENND4A	80718	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	69063538	69063566	69063553	Y	NA	ANP32A	NA	NA	NA	NA	ANP32A	47670	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	70248819	70249136	70249012	Y	TLE3	NA	C15orf50,LOC145837	IMR90	Hi-C	24141950	TLE3	139379	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	70391851	70392235	70392005	Y	TLE3	TLE3	NA	NA	NA	NA	TLE3	3336	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr15	75288966	75289325	75289146	Y	CPLX3,ULK3,SCAMP5	SCAMP5,RPP25,PPCDC	NA	NA	NA	NA	PPCDC	24571	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	75745296	75745530	75745399	Y	PPCDC,IMP3,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	653	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	75747348	75747533	75747407	Y	RPP25,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1165	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	76050803	76051078	76050853	Y	NA	DNM1P35	NA	NA	NA	NA	DNM1P35	21839	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	82339167	82339811	82339478	Y	MEX3B	MEX3B	NA	NA	NA	NA	MEX3B	2685	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr15	83239509	83239741	83239625	Y	AP3B2,CPEB1	NA	NA	NA	NA	NA	CPEB1	75871	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	84256275	84256758	84256443	Y	SH3GL3	NA	NA	NA	NA	NA	HDGFRP3	381505	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	86020857	86021180	86020870	Y	KLHL25	NA	NA	NA	NA	NA	AKAP13	99055	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	89532902	89533939	89533555	Y	NA	NA	MFGE8,ABHD2	IMR90	Hi-C	24141950	ABHD2	94751	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	89664635	89664981	89664666	Y	NA	ABHD2	NA	NA	NA	NA	ABHD2	35945	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr15	89675943	89676620	89676217	Y	ISG20,ABHD2	ABHD2	NA	NA	NA	NA	ABHD2	47253	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	90944087	90944636	90944284	Y	FES,FES,FES,ZNF710,CIB1,C15orf58,CRTC3,IQGAP1	IQGAP1	NA	NA	NA	NA	IQGAP1	14637	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	92481402	92481730	92481524	Y	SLCO3A1	NA	NA	NA	NA	NA	SLCO3A1	86477	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	92490454	92490951	92490737	Y	SLCO3A1	NA	NA	NA	NA	NA	SLCO3A1	95529	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	93142854	93143118	93142986	Y	NA	NA	NA	NA	NA	NA	RP11-386M24.4	132307	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr15	93354824	93354998	93354897	Y	CHD2	FAM174B	NA	NA	NA	NA	FAM174B	3710	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr15	93363497	93364154	93363735	Y	ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2	FAM174B	ASB9P1,CHD2,LOC100507217	IMR90	Hi-C	24141950	FAM174B	12383	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr15	93374780	93375598	93375185	Y	NA	FAM174B,CHD2	CHD2,LOC100507217,ASB9P1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM174B	23666	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	575519	575832	575766	Y	NHLRC4	PIGQ	NA	NA	NA	NA	PIGQ	39163	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	1232339	1232689	1232437	Y	NA	CACNA1H	NA	NA	NA	NA	CACNA1H	31098	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	1979729	1980160	1979842	Y	TSC2,MLST8,DNASE1L2,C16orf79,ABCA3,CCDC154,NME3,NUBP2,TBL3,RNF151	HS3ST6,NDUFB10,RPS2,SNHG9,TBL3	NUBP2,FAHD1,IGFALS,C16orf73,HS3ST6,MAPK8IP3,SPSB3,EME2,NME3,MRPS34,HAGH,LINC00254	IMR90	Hi-C	24141950	HS3ST6	13288	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	2104972	2105164	2105052	Y	NA	ZNF598,NPW,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	NTHL1	9105	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	2582505	2583298	2582685	Y	RAB26,E4F1,SRRM2,ATP6V0C,ATP6V0C,AMDHD2,CEMP1,PDPK1	ATP6V0C,AMDHD2,PDPK1	NA	NA	NA	NA	PDPK1	2667	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	2917931	2918273	2918246	Y	NA	FLYWCH2,FLYWCH1	PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	FLYWCH2	12914	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	3053798	3054225	3053960	Y	NA	PAQR4,PKMYT1,CLDN9,TNFRSF12A,THOC6,HCFC1R1	NA	NA	NA	NA	CLDN9	6232	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	3060017	3060177	3060084	Y	NAT15,PRSS22,CCDC64B,THOC6,CLDN9	PAQR4,PKMYT1,CLDN9,TNFRSF12A,THOC6,HCFC1R1	NA	NA	NA	NA	CLDN9	280	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	3156518	3156937	3156694	Y	PAQR4,CLUAP1,ZNF205	ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	3624	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr16	3200393	3200919	3200597	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	22615	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	3414643	3415237	3414919	Y	NA	ZNF174	NA	NA	NA	NA	ZNF174	33998	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	4233647	4234082	4234013	Y	NA	NA	NA	NA	NA	NA	ADCY9	69461	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	4321625	4322178	4321908	Y	ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4	TFAP4	NA	NA	NA	NA	TFAP4	549	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	11012685	11013009	11012730	Y	TEKT5,FAM18A,CIITA,CLEC16A	DEXI,CLEC16A	NA	NA	NA	NA	DEXI	21308	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	11890330	11890418	11890367	Y	LITAF,LITAF,SNN,RUNDC2A,TXNDC11,ZC3H7A	ZC3H7A	NA	NA	NA	NA	ZC3H7A	1207	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	14402100	14402342	14402181	Y	NA	NA	NA	NA	NA	NA	MKL2	238922	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	22207042	22207397	22207176	Y	NA	EEF2K	POLR3E,EEF2K,C16orf52	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	8206	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	23377055	23377415	23377279	Y	SCNN1B	NA	NA	NA	NA	NA	COG7	85086	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	23871062	23871733	23871381	Y	GGA2,PRKCB	NA	NA	NA	NA	NA	PLK1	184085	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	30645556	30645885	30645776	Y	CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14	ZNF689,PRR14,FBRS	PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF689	12223	CAGE	NCI-H1385	hg19	FANTOM5	6.25462654453684
chr16	30825606	30826012	30825883	Y	NA	ZNF629	ZNF629,RNF40,MIR4519	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF629	29083	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	30885980	30886229	30886174	Y	ZNF689,PHKG2,RNF40,C16orf93,ZNF668	MIR4519,BCL7C,FBXL19-AS1	NA	NA	NA	NA	MIR4519	1336	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	31264985	31265278	31265093	Y	STX4,ZNF668,ZNF646,MYST1,ITGAX,PYCARD,ITGAM	NA	NA	NA	NA	NA	FUS	75554	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	34441880	34442279	34442062	Y	NA	NA	NA	NA	NA	NA	ZNF267	2558801	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	46823783	46824029	46823881	Y	NA	C16orf87	NA	NA	NA	NA	C16orf87	39294	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr16	47175603	47175949	47175815	Y	NETO2	NA	NA	NA	NA	NA	NETO2	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	53517834	53518098	53518006	Y	NA	AKTIP	NA	NA	NA	NA	AKTIP	18225	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	66906996	66907469	66907329	Y	SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2	NAE1,PDP2	NA	NA	NA	NA	NAE1	1837	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	66988106	66988414	66988274	Y	NA	FAM96B,CES2,CES3,CES4A	NA	NA	NA	NA	CES3	4726	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	69790577	69791500	69790768	Y	PDF,NIP7,NOB1	NQO1,NOB1,WWP2	NA	NA	NA	NA	WWP2	2709	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	70779915	70780216	70780046	Y	NA	NA	NA	NA	NA	NA	VAC14	52848	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr16	72257967	72258413	72258290	Y	NA	NA	HPR	IMR90	Hi-C	24141950	TXNL4B	131637	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	72459158	72459630	72459377	Y	NA	NA	NA	NA	NA	NA	TXNL4B	332828	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	73102955	73103191	73103082	Y	ZFHX3	ZFHX3	ZFHX3,HTA	IMR90	Hi-C	24141950	ZFHX3	11358	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	73104505	73104770	73104567	Y	ZFHX3,ZFHX3	ZFHX3	ZFHX3,HTA	IMR90	Hi-C	24141950	ZFHX3	12908	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr16	74701397	74701877	74701440	Y	RFWD3	RFWD3	NA	NA	NA	NA	RFWD3	2618	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	75628076	75628219	75628207	Y	NA	TMEM231,GABARAPL2,ADAT1	NA	NA	NA	NA	ADAT1	26979	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	80060890	80061347	80061153	Y	NA	NA	NA	NA	NA	NA	MAF	428279	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	81763852	81764387	81764185	Y	NA	NA	NA	NA	NA	NA	SDR42E1	278706	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	84545075	84545257	84545139	Y	NA	NA	COTL1	MCF7	ChIA-PET	22265404	COTL1	104426	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	85470615	85470779	85470696	Y	NA	NA	KIAA0182,LOC400548,FAM92B,LINC00311,LOC727710,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	250900	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	85498599	85498960	85498791	Y	KIAA0182	NA	KIAA0182,LOC727710,C16orf74,LINC00311,LOC400548,FAM92B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	222719	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	85586938	85587370	85587020	Y	NA	NA	LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	134309	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	85783855	85783992	85783913	Y	NA	C16orf74,COX4I1	NA	NA	NA	NA	C16orf74	1120	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	87421939	87422407	87422148	Y	NA	MAP1LC3B,FBXO31	NA	NA	NA	NA	FBXO31	1341	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	87812654	87813065	87812978	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	15056	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr16	89268043	89268411	89268231	Y	NA	ZNF778	NA	NA	NA	NA	ZNF778	13707	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	89313669	89314138	89313993	Y	ZNF276,ZNF778	ZNF778	NA	NA	NA	NA	ZNF778	31551	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr16	89392350	89392997	89392648	Y	NA	NA	NA	NA	NA	NA	ZNF778	110232	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	89573610	89573931	89573734	Y	NA	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	18285	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr16	90143699	90144065	90143926	Y	C16orf55,SPATA2L,ZNF276,C16orf7,ZNF276,TCF25	NA	LOC100130015,GAS8	MCF7	ChIA-PET	22265404	DBNDD1	59163	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	117780	117923	117852	Y	NA	NA	DOC2B	IMR90	Hi-C	24141950	DOC2B	88353	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	234794	234851	234823	Y	DOC2B	RPH3AL,C17orf97	RPH3AL,DOC2B	IMR90	Hi-C	24141950	RPH3AL	749	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	473610	473838	473725	Y	FAM101B	NA	NA	NA	NA	NA	VPS53	149119	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	698193	698349	698271	Y	NA	DBIL5P,GEMIN4,RNMTL1,GLOD4	NA	NA	NA	NA	GLOD4	14612	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	990722	991295	990801	Y	NA	NA	NA	NA	NA	NA	TIMM22	92365	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	1011015	1011228	1011147	Y	NA	NA	NA	NA	NA	NA	TIMM22	112658	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	1391218	1391783	1391434	Y	NA	CRK,MYO1C,INPP5K,PITPNA-AS1	NA	NA	NA	NA	MYO1C	2323	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	1466992	1467380	1467296	Y	RILP	INPP5K,PITPNA-AS1,PITPNA	NA	NA	NA	NA	PITPNA	2882	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	1533068	1533815	1533453	Y	CRK,INPP5K,WDR81,WDR81,WDR81,PITPNA,SLC43A2,SCARF1	SLC43A2,RILP	NA	NA	NA	NA	SLC43A2	2888	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	1620806	1621089	1620895	Y	PITPNA,SLC43A2,SCARF1,OVCA2,WDR81,WDR81,WDR81	PRPF8,WDR81,MIR22HG	NA	NA	NA	NA	MIR22HG	2338	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	1953067	1954207	1953327	Y	TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1	RTN4RL1,DPH1,OVCA2	NA	NA	NA	NA	OVCA2	9740	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	2302108	2302510	2302261	Y	RAP1GAP2,PAFAH1B1,MNT	NA	NA	NA	NA	NA	MNT	0	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	2302778	2303366	2303033	Y	SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT	MNT	NA	NA	NA	NA	MNT	366	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	4205148	4205753	4205440	Y	P2RX1,ATP2A3,ZZEF1,ZMYND15,ZMYND15,SMTNL2,SMTNL2,ARRB2,UBE2G1	ANKFY1	NA	NA	NA	NA	ANKFY1	39874	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	4737531	4737755	4737558	Y	PLD2,MINK1	PSMB6,PLD2,MINK1	NA	NA	NA	NA	MINK1	2848	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	7737438	7738736	7737971	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	20328	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	7738822	7740614	7739046	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	18450	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	7745337	7745870	7745591	Y	NA	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	13194	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	7746991	7747556	7747325	Y	POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	11508	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	7790181	7790340	7790322	Y	POLR2A,WRAP53,PER1,CTC1,KDM6B,CHD3,CHD3	CYB5D1,CHD3,LSMD1,AC025335.1,CNTROB,TRAPPC1	NA	NA	NA	NA	LSMD1	3625	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	8029634	8030116	8029995	Y	NA	HES7,VAMP2,SNORD118,TMEM107	NA	NA	NA	NA	HES7	4224	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	8057335	8058055	8057702	Y	KDM6B,NDEL1,CTC1,PER1,VAMP2,C17orf59	HES7,VAMP2,SNORD118,TMEM107,C17orf59	NA	NA	NA	NA	VAMP2	6809	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	8095551	8095762	8095658	Y	KDM6B,KCNAB3,CTC1,VAMP2	VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	3987	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	8103328	8103700	8103595	Y	NA	VAMP2,SNORD118,TMEM107,C17orf59,AURKB,PFAS,CTC1	NA	NA	NA	NA	AURKB	8218	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	8827075	8827289	8827193	Y	NDEL1,PIK3R5,PIK3R5	NA	NA	NA	NA	NA	MYH10	294996	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	13390789	13390935	13390899	Y	NA	NA	NA	NA	NA	NA	ELAC2	471285	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	14044844	14045160	14045003	Y	NA	NA	NA	NA	NA	NA	COX10	74031	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	17319893	17320013	17319952	Y	FLCN	RPL13P12	NA	NA	NA	NA	RPL13P12	34567	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	17397062	17397447	17397255	Y	NA	MED9,RASD1	NA	NA	NA	NA	RASD1	262	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	17470517	17470759	17470631	Y	LRRC48	PEMT	RASD1	MCF7	ChIA-PET	22265404	PEMT	22263	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	17597479	17598220	17598134	Y	ALKBH5,FLCN,COPS3	RAI1	NA	NA	NA	NA	RAI1	14692	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	17686462	17687119	17686716	Y	NA	NA	NA	NA	NA	NA	SREBF1	51206	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	19656390	19656618	19656531	Y	MAPK7,MAPK7	NA	NA	NA	NA	NA	ALDH3A2	106941	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	20755696	20755942	20755820	Y	NA	NA	NA	NA	NA	NA	SCDP1	69738	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	21179100	21179414	21179208	Y	CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3	MAP2K3	MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAP2K3	6570	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	22191973	22192114	22192043	Y	NA	NA	NA	NA	NA	NA	C17orf51	716251	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	25409900	25410125	25410078	Y	NA	NA	NA	NA	NA	NA	WSB1	208977	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	25416172	25416581	25416426	Y	NA	NA	NA	NA	NA	NA	WSB1	202521	CAGE	NCI-H1385	hg19	FANTOM5	32.8367893588184
chr17	25659975	25660361	25659997	Y	NA	WSB1	NA	NA	NA	NA	WSB1	40873	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	25680632	25681097	25680982	Y	NA	NA	KSR1,WSB1,MIR4522	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WSB1	61530	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr17	27475765	27476166	27476073	Y	NEK8,PHF12	MYO18A	NA	NA	NA	NA	MYO18A	29264	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	27506307	27506816	27506504	Y	TLCD1,TLCD1,TRAF4,GIT1,MYO18A	MYO18A	NA	NA	NA	NA	MYO18A	877	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	29717293	29717639	29717335	Y	OMG,RAB11FIP4	RAB11FIP4	NA	NA	NA	NA	RAB11FIP4	651	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	30726822	30727202	30727012	Y	NA	PSMD11	NA	NA	NA	NA	PSMD11	42077	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	30846365	30846870	30846526	Y	NA	CDK5R1	NA	NA	NA	NA	CDK5R1	34728	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	30847234	30847756	30847477	Y	NA	CDK5R1	NA	NA	NA	NA	CDK5R1	35597	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	33349623	33350064	33349994	Y	SLFN5,SLFN12L,CCT6B,ZNF830,RFFL	LIG3	NA	NA	NA	NA	LIG3	44110	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	35078576	35079010	35078700	Y	NA	NA	LHX1,AATF,ACACA,MRM1,DHRS11	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	MRM1	122575	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	36571646	36572076	36571709	Y	C17orf96	NA	NA	NA	NA	NA	SOCS7	65535	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	37366071	37366159	37366135	Y	STAC2	CACNB1,RPL19	NA	NA	NA	NA	RPL19	11535	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	37542274	37542291	37542284	Y	NA	FBXL20	NA	NA	NA	NA	FBXL20	14485	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	38467869	38468243	38468028	Y	NA	CDC6,RARA	NA	NA	NA	NA	RARA	4425	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	38509274	38509600	38509311	Y	NA	RARA	NA	NA	NA	NA	RARA	45830	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	42215472	42215904	42215679	Y	C17orf53	HDAC5,C17orf53,ASB16,TMUB2	C17orf53	MCF7	ChIA-PET	22265404	C17orf53	1370	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	42276572	42276897	42276785	Y	TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3	ASB16,TMUB2,ATXN7L3,UBTF	NA	NA	NA	NA	ATXN7L3	1091	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr17	42404001	42404290	42404282	Y	C17orf65,TMUB2,TMUB2,UBTF,ITGA2B,SLC4A1,SLC25A39	RUNDC3A,SLC25A39,GRN,FAM171A2	NA	NA	NA	NA	SLC25A39	3763	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	42861642	42861917	42861696	Y	NA	GJC1	NA	NA	NA	NA	GJC1	44267	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	43095998	43096402	43096133	Y	NA	NMT1,DCAKD	NA	NA	NA	NA	NMT1	30576	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	44344171	44344471	44344293	Y	NA	NA	KANSL1-AS1,KANSL1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MAPT	374423	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	44848812	44849347	44849259	Y	NA	NA	NA	NA	NA	NA	RPS7P11	51279	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	45771013	45771467	45771041	Y	NPEPPS,OSBPL7,CDK5RAP3,TBX21,TBKBP1	KPNB1	NA	NA	NA	NA	KPNB1	46171	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	45778272	45778788	45778511	Y	SNX11,SNX11,ITGB3,C17orf57,NPEPPS,SP2,OSBPL7,CDK5RAP3,TBKBP1,TBX21	NA	NA	NA	NA	NA	KPNB1	53430	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	46091721	46092069	46091883	Y	NA	CDK5RAP3,NFE2L1	SP2,PNPO,CDK5RAP3,PRR15L	IMR90	Hi-C	24141950	NFE2L1	31622	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	46226881	46226967	46226912	Y	TBX21,OSBPL7,LRRC46,SKAP1	CBX1,SNX11	SNX11	IMR90	Hi-C	24141950	SNX11	48162	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	46583139	46583523	46583310	Y	SKAP1	HOXB-AS1,HOXB2,HOXB-AS3	HOXB2,HOXB3,HOXB4,SKAP1,HOXB8,HOXB1,HOXB9	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HOXB-AS1	35390	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	46662223	46662405	46662377	Y	NA	HOXB-AS1,HOXB2,HOXB-AS3,HOXB5,HOXB3,HOXB6,HOXB8,HOXB9,HOXB7	NA	NA	NA	NA	HOXB5	6918	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	46662684	46663231	46662943	Y	HOXB2,HOXB3,HOXB4,HOXB9,HOXB8,HOXB7,HOXB6,HOXB5	HOXB-AS1,HOXB2,HOXB-AS3,HOXB5,HOXB3,HOXB6,HOXB8,HOXB9,HOXB7	NA	NA	NA	NA	HOXB5	6092	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	46664992	46665342	46665097	Y	NA	HOXB-AS1,HOXB2,HOXB-AS3,HOXB5,HOXB3,HOXB6,HOXB8,HOXB9,HOXB7	NA	NA	NA	NA	HOXB5	3981	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	46696942	46697254	46696999	Y	NA	HOXB5,HOXB3,HOXB6,HOXB8,HOXB9,HOXB7,RP11-357H14.17	NA	NA	NA	NA	HOXB9	4585	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	47270202	47270509	47270359	Y	CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3	NA	NA	NA	NA	NA	ZNF652	167326	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	48228924	48229616	48229504	Y	SPATA20,SAMD14	SAMD14,PPP1R9B	NA	NA	NA	NA	PPP1R9B	2933	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	48996944	48997365	48997235	Y	UTP18,RSAD1,TOB1	NA	LOC400604,TOB1,WFIKKN2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TOB1	53605	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr17	49028088	49028439	49028211	Y	NA	NA	NA	NA	NA	NA	TOB1	84749	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	50024582	50024600	50024591	Y	CA10,CA10,CA10	NA	NA	NA	NA	NA	CA10	210777	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	53315618	53315983	53315841	Y	HLF	HLF	STXBP4,HLF	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HLF	24390	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	55740175	55740776	55740501	Y	MSI2,MSI2,DYNLL2	NA	NA	NA	NA	NA	MRPS23	184641	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	55749375	55749748	55749439	Y	NA	NA	NA	NA	NA	NA	MRPS23	175669	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	55860194	55860305	55860223	Y	NA	NA	MSI2,AKAP1	IMR90	Hi-C	24141950	MRPS23	65112	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	56736656	56737064	56736885	Y	MTMR4,SEPT4,SEPT4,PPM1E	RNU1-60P,RNU1-108P,RNU1-85P,RAD51C	SEPT4,C17orf47	K562,MCF7	ChIA-PET	22265404	RNU1-60P	1990	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	57443443	57443708	57443557	Y	YPEL2	YPEL2	NA	NA	NA	NA	YPEL2	36393	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	59474585	59474918	59474715	Y	NA	TBX2	NA	NA	NA	NA	TBX2	339	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	59488217	59488528	59488332	Y	NA	TBX2	NA	NA	NA	NA	TBX2	12960	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	61043121	61043648	61043243	Y	NA	NA	NA	NA	NA	NA	MARCH10	159416	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	63060882	63060952	63060917	Y	GNA13	GNA13	GNA13,RGS9	IMR90	Hi-C	24141950	GNA13	9925	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	63624560	63624814	63624604	Y	NA	NA	NA	NA	NA	NA	RGS9	493011	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	65242250	65242562	65242536	Y	NA	HELZ,SNORA8	NA	NA	NA	NA	HELZ	2145	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	65389377	65389540	65389482	Y	HELZ,BPTF,PITPNC1	PSMD12,PITPNC1	NA	NA	NA	NA	PITPNC1	17802	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	66016045	66016315	66016119	Y	NA	C17orf58,KPNA2	BPTF,C17orf58,KPNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KPNA2	13320	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	66817214	66817283	66817253	Y	NA	NA	ABCA8	IMR90	Hi-C	24141950	PRKAR1A	311293	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	70585200	70585480	70585419	Y	NA	NA	NA	NA	NA	NA	SOX9-AS1	369223	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	70628447	70628581	70628499	Y	NA	NA	NA	NA	NA	NA	SOX9-AS1	412470	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	72978355	72978661	72978434	Y	KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L	OTOP3,CDR2L,ICT1,KCTD2	CDR2L,ICT1,C17orf28,HN1	MCF7,K562	ChIA-PET	22265404	CDR2L	3066	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	74117633	74117738	74117682	Y	NA	EXOC7	NA	NA	NA	NA	EXOC7	1976	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	74836829	74837207	74837140	Y	UBE2O,MGAT5B	MGAT5B	MFSD11,MGAT5B,SEC14L1,SRSF2,SEPT9	IMR90	Hi-C	24141950	MGAT5B	25331	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	75199050	75199385	75199187	Y	NA	NA	NA	NA	NA	NA	SEPT9	75266	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	75422359	75422648	75422577	Y	SEPT9,SEPT9,SEPT9,SEPT9	NA	NA	NA	NA	NA	SEPT9	147708	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	75798844	75799281	75799210	Y	TNRC6C,TMEM235	NA	LOC100507351,TNRC6C	IMR90	Hi-C	24141950	TNRC6C	198968	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	75953939	75954304	75954190	Y	TMEM235,TMC8,TMC6,TMC6,SOCS3,PGS1,TNRC6C	TNRC6C	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TNRC6C	43945	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	75954393	75954796	75954614	Y	NA	TNRC6C	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TNRC6C	43453	CAGE	NCI-H1385	hg19	FANTOM5	30.4913044046171
chr17	76348964	76349371	76349046	Y	USP36,CYTH1,TMC6,TMC8,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	4787	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	76356993	76357093	76357047	Y	SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	2835	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	77783959	77784243	77784073	Y	CBX2,CBX8	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	10477	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	77787297	77787609	77787349	Y	NA	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	13815	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	77967532	77967765	77967641	Y	CBX8,CBX4,RNF213,GAA,EIF4A3	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	39882	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr17	78428203	78429274	78428566	Y	NA	ENDOV,NPTX1	NA	NA	NA	NA	NPTX1	20369	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	78560725	78560872	78560817	Y	NA	RPTOR	NA	NA	NA	NA	RPTOR	44106	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	78725388	78725609	78725479	Y	AATK	NA	NA	NA	NA	NA	RPTOR	208769	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	78734428	78734929	78734574	Y	C17orf56	NA	NA	NA	NA	NA	RPTOR	217809	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	78806684	78807307	78807121	Y	C17orf56	NA	NA	NA	NA	NA	CHMP6	156091	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr17	79319325	79319648	79319507	Y	FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	51978	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	79319812	79320225	79320116	Y	FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1	NA	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC38A10	52465	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	79360408	79361324	79361141	Y	ARHGDIA,ARHGDIA,TSPAN10	NA	NA	NA	NA	NA	SLC38A10	93061	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr17	79448388	79448678	79448571	Y	NPB,AATK,AZI1,BAHCC1	RP13-766D20.2,ACTG1	NA	NA	NA	NA	RP13-766D20.2	30395	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr17	79451287	79451558	79451462	Y	AATK,AZI1,BAHCC1	RP13-766D20.2,ACTG1	NA	NA	NA	NA	RP13-766D20.2	27515	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	80056613	80056910	80056718	Y	C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN	RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	2405	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	80255299	80255755	80255478	Y	SIRT7,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,C17orf62,C17orf62,CSNK1D,SECTM1,CD7	CSNK1D	NA	NA	NA	NA	CSNK1D	25692	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr17	80255798	80256475	80256187	Y	SIRT7,MAFG,MAFG,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,HEXDC,C17orf62,C17orf62,CSNK1D,SECTM1,CD7	CSNK1D	NA	NA	NA	NA	CSNK1D	26191	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	80453708	80453979	80453866	Y	LRRC45,DUS1L,FASN,UTS2R,TBCD,FOXK2	C17orf62,NARF,FOXK2	NA	NA	NA	NA	FOXK2	21610	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	80454894	80455238	80455175	Y	LRRC45,CCDC57,FN3KRP,NARF	C17orf62,NARF,FOXK2	NA	NA	NA	NA	FOXK2	20351	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr17	80796209	80796714	80796435	Y	METRNL,ZNF750	NA	NA	NA	NA	NA	TBCD	88269	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	667633	668016	667981	Y	THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11293	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	2031840	2031857	2031849	Y	NA	NA	NA	NA	NA	NA	METTL4	537651	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	3630146	3630509	3630328	Y	DLGAP1	NA	NA	NA	NA	NA	TGIF1	220540	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	3665613	3666165	3665884	Y	NA	NA	NA	NA	NA	NA	TGIF1	256007	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	5895274	5895803	5895585	Y	TMEM200C	NA	L3MBTL4	IMR90	Hi-C	24141950	EPB41L3	266575	CAGE	NCI-H1385	hg19	FANTOM5	31.2731327226842
chr18	7460129	7460467	7460298	Y	NA	NA	NA	NA	NA	NA	PTPRM	104313	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	8661812	8662039	8661951	Y	NA	NA	ANKRD12,CCDC165,TWSG1,NDUFV2	IMR90	Hi-C	24141950	RAB12	54369	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr18	9914998	9915501	9915128	Y	PPP4R1,RAB31,VAPA	VAPA	NA	NA	NA	NA	VAPA	2999	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	10766591	10766813	10766750	Y	NA	NA	NA	NA	NA	NA	NAPG	242689	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	11849903	11850727	11850169	Y	MPPE1,CHMP1B	CHMP1B	NA	NA	NA	NA	CHMP1B	508	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	12765132	12765369	12765274	Y	CEP76	NA	NA	NA	NA	NA	CEP76	64356	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	21562247	21562750	21562607	Y	NA	TTC39C	TTC39C	IMR90	Hi-C	24141950	TTC39C	7987	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr18	32239709	32239834	32239782	Y	MAPRE2,DTNA,DTNA,DTNA,DTNA,DTNA,DTNA	NA	NA	NA	NA	NA	DTNA	168455	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	33876540	33877026	33876703	Y	NA	FHOD3	NA	NA	NA	NA	FHOD3	863	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	33878609	33878753	33878681	Y	FHOD3	FHOD3	NA	NA	NA	NA	FHOD3	2932	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	38923845	38924195	38924020	Y	NA	NA	NA	NA	NA	NA	PIK3C3	608976	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	45688048	45688324	45688110	Y	NA	NA	NA	NA	NA	NA	SMAD2	232533	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr18	46066779	46067121	46067052	Y	CTIF	CTIF	NA	NA	NA	NA	CTIF	3362	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	46072108	46072320	46072224	Y	NA	CTIF	NA	NA	NA	NA	CTIF	8691	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	46242460	46242735	46242629	Y	SMAD7	NA	NA	NA	NA	NA	CTIF	179043	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	46349762	46350033	46349891	Y	NA	NA	NA	NA	NA	NA	CTIF	286345	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	46478230	46479206	46479122	Y	SMAD7,SMAD7	NA	NA	NA	NA	NA	CTIF	414813	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr18	46502180	46502412	46502333	Y	SMAD7	NA	SMAD7,CTIF	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CTIF	438763	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr18	55095005	55095410	55095044	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	5507	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr18	55101559	55101949	55101758	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	642	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr18	55102016	55102207	55102112	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	1099	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr18	55104670	55104954	55104730	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	3753	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	55105190	55105288	55105239	Y	ST8SIA3,ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	4273	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	55108186	55108329	55108231	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	7269	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	55108837	55109086	55108936	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	7920	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr18	55109141	55109496	55109318	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	8224	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	60189219	60189514	60189362	Y	TNFRSF11A,ZCCHC2	ZCCHC2	NA	NA	NA	NA	ZCCHC2	979	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	60193382	60194139	60194065	Y	KIAA1468,PHLPP1,ZCCHC2	ZCCHC2	NA	NA	NA	NA	ZCCHC2	5142	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr18	60456322	60456424	60456373	Y	NA	NA	NA	NA	NA	NA	PHLPP1	75650	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	60598497	60598585	60598560	Y	NA	NA	NA	NA	NA	NA	PHLPP1	217825	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	60864948	60865713	60864996	Y	PHLPP1,VPS4B	NA	NA	NA	NA	NA	BCL2	119648	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	60874386	60874946	60874584	Y	VPS4B,BCL2	NA	NA	NA	NA	NA	BCL2	110415	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	60891499	60892086	60892002	Y	VPS4B	NA	NA	NA	NA	NA	BCL2	93275	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	63434118	63434346	63434234	Y	CDH7	CDH7	NA	NA	NA	NA	CDH7	18630	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	63445505	63445788	63445646	Y	CDH7	CDH7	NA	NA	NA	NA	CDH7	30017	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	63496695	63496713	63496704	Y	NA	NA	NA	NA	NA	NA	CDH7	81207	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	65945074	65945279	65945262	Y	NA	NA	LOC643542	IMR90	Hi-C	24141950	CCDC102B	435167	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	66508189	66508486	66508312	Y	NA	NA	NA	NA	NA	NA	TMX3	127654	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	70535937	70536272	70536159	Y	NA	NETO1	NA	NA	NA	NA	NETO1	2556	CAGE	NCI-H1385	hg19	FANTOM5	6.25462654453684
chr18	70536769	70537080	70536861	Y	CBLN2,NETO1,NETO1	NETO1	NA	NA	NA	NA	NETO1	3388	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr18	74802146	74802233	74802190	Y	MBP	NA	NA	NA	NA	NA	ZNF236	269583	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr18	78004258	78004625	78004566	Y	PARD6G	PARD6G	NA	NA	NA	NA	PARD6G	829	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	290136	290651	290316	Y	RNF126,GZMM,C19orf21,PPAP2C,PPAP2C	PPAP2C	NA	NA	NA	NA	PPAP2C	743	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	908605	908810	908775	Y	NA	MED16,R3HDM4,KISS1R	NA	NA	NA	NA	R3HDM4	2430	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	1240232	1240534	1240365	Y	MUM1,APC2,C19orf26	ATP5D,MIDN,CIRBP,C19orf24,MUM1	NA	NA	NA	NA	ATP5D	483	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	1260732	1261171	1260912	Y	NA	ATP5D,MIDN,CIRBP,C19orf24,MUM1	NA	NA	NA	NA	CIRBP	3348	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	2494705	2495117	2494880	Y	DOT1L,GADD45B	LMNB2,GADD45B	NA	NA	NA	NA	GADD45B	20585	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	2543618	2543970	2543682	Y	DOT1L,GADD45B	NA	NA	NA	NA	NA	GADD45B	69498	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	3035530	3035851	3035686	Y	NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2	TLE2,AES	NA	NA	NA	NA	TLE2	9782	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	5338459	5338816	5338637	Y	PTPRS	NA	NA	NA	NA	NA	PTPRS	0	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	6056849	6057757	6057360	Y	DENND1C,SAFB2,SAFB,VMAC,RFX2	NA	NA	NA	NA	NA	RANBP3	80696	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	9777343	9777681	9777659	Y	ZNF559,ZNF559,ZNF177,ZNF846	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	6095	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	9896233	9896620	9896495	Y	ZNF266,COL5A3,ZNF846	FBXL12,UBL5,PIN1	NA	NA	NA	NA	FBXL12	39872	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	10515339	10515636	10515481	Y	PDE4A,PDE4A	TYK2,MIR1181	NA	NA	NA	NA	MIR1181	3125	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	11202963	11203178	11203054	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	4925	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	12888910	12889352	12889266	Y	NA	C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A	NA	NA	NA	NA	JUNB	10958	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	13957204	13959386	13957586	Y	NA	NA	NA	NA	NA	NA	ZSWIM4	52930	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	13976745	13977653	13977105	Y	CACNA1A,RFX1,LPHN1,ZSWIM4,C19orf57	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	37361	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	14732511	14733275	14733016	Y	SYDE1	NA	NA	NA	NA	NA	NDUFB7	51637	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	15947617	15948119	15947980	Y	AKAP8,AKAP8L,RASAL3,OR10H3,OR10H4,RAB8A,KLF2,AP1M1	NA	NA	NA	NA	NA	CYP4F11	95558	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	18414244	18414595	18414365	Y	NA	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	LSM4	17489	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	18415031	18416060	18415513	Y	JAK3,KCNN1,ARRDC2,ARRDC2,IL12RB1,SSBP4,KLHL26,ELL,C19orf60,JUND	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	LSM4	16024	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	18527701	18528040	18527800	Y	KCNN1,ARRDC2,ARRDC2,IL12RB1,IFI30,JUND,PGPEP1,LRRC25,SSBP4	GDF15,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	27	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	18740732	18741107	18740923	Y	NA	C19orf60,TMEM59L,KLHL26	NA	NA	NA	NA	KLHL26	4668	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	19248225	19248392	19248286	Y	NA	TMEM161A	NA	NA	NA	NA	TMEM161A	903	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	21689202	21689645	21689487	Y	ZNF430,ZNF708,ZNF493,ZNF100,ZNF429	ZNF429	NA	NA	NA	NA	ZNF429	11718	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	27733888	27734761	27733974	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1967687	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	29702850	29703471	29703365	Y	NA	UQCRFS1	NA	NA	NA	NA	UQCRFS1	402	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	34850085	34850642	34850351	Y	ZNF599,ZNF302,ZNF181	GPI,PDCD2L	NA	NA	NA	NA	GPI	1700	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	35491833	35492367	35492256	Y	FFAR3,FFAR2,USF2,FXYD5,FXYD5,FXYD5,GRAMD1A	GRAMD1A	NA	NA	NA	NA	GRAMD1A	8145	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	36193251	36193562	36193412	Y	USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33	IGFLR1,PSENEN,U2AF1L4,LIN37	MLL4,ZBTB32	K562	ChIA-PET	22265404	IGFLR1	37792	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	36618643	36619171	36618835	Y	NA	TBCB,POLR2I,CAPNS1	NA	NA	NA	NA	CAPNS1	9306	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	39149253	39149575	39149354	Y	SPINT2,C19orf33,PAK4,ACTN4	EIF3K,ACTN4	NA	NA	NA	NA	ACTN4	12964	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	39891902	39892845	39892340	Y	GMFG,SAMD4B,PAF1,MED29,ZFP36,SUPT5H,SUPT5H,RPS16,PLEKHG2	PAF1,MED29,ZFP36,PLEKHG2,RPS16,SUPT5H	NA	NA	NA	NA	ZFP36	2608	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	40315090	40315548	40315357	Y	NA	DYRK1B,FBL	NA	NA	NA	NA	DYRK1B	7293	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	41304071	41304255	41304136	Y	SERTAD1,SERTAD3,SHKBP1,ADCK4,ADCK4,RAB4B,HNRNPUL1	SNRPA,C19orf54,MIA,RAB4B,EGLN2	NA	NA	NA	NA	EGLN2	1170	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	41915515	41915996	41915671	Y	ARHGEF1,HNRNPUL1,TGFB1	B9D2,BCKDHA,EXOSC5,B3GNT8,ATP5SL	NA	NA	NA	NA	EXOSC5	14131	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	42432096	42432209	42432128	Y	NA	ARHGEF1,RABAC1	NA	NA	NA	NA	RABAC1	29333	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	42772295	42772768	42772477	Y	NA	ZNF526,GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	1606	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	42772804	42773312	42773020	Y	CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	2115	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	42775992	42776735	42776352	Y	NA	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	NA	NA	NA	NA	CIC	5303	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	42784087	42784212	42784170	Y	CEACAM8,CEACAM3,DEDD2	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13398	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	42784527	42784991	42784716	Y	ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13838	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	44124638	44124922	44124781	Y	CADM4	XRCC1,IRGQ,ZNF576,SRRM5,ZNF428,CADM4	NA	NA	NA	NA	ZNF428	2612	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	44249305	44249426	44249352	Y	IRGQ,ZNF222,PLAUR,KCNN4,C19orf61	SMG9	NA	NA	NA	NA	SMG9	7716	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	44555398	44555498	44555444	Y	ZNF155,ZNF223	ZNF222,ZNF223,ZNF284,ZNF224	NA	NA	NA	NA	ZNF223	1878	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	45256546	45257099	45256742	Y	ZNF296,RELB,CLASRP,BLOC1S3,BCL3	BCL3	NA	NA	NA	NA	BCL3	7584	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	45393623	45393866	45393750	Y	ZNF285,ZNF180,GEMIN7,GEMIN7,CLASRP,TOMM40	PVRL2,TOMM40,APOE,APOC1	NA	NA	NA	NA	TOMM40	1797	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	45953262	45953678	45953446	Y	GIPR,RELB,CLASRP,BLOC1S3,PPM1N,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	15575	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	45953764	45954783	45954182	Y	NA	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	14470	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	46011701	46012269	46011904	Y	FBXO46,CLASRP,ZNF296,VASP	FOSB,ERCC1,PPM1N,VASP	NA	NA	NA	NA	VASP	3864	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	46386037	46386278	46386146	Y	OPA3,GIPR,FBXO46,SYMPK,FOXA3	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	IRF2BP1	1098	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	46877153	46877367	46877269	Y	NA	PPP5C	NA	NA	NA	NA	PPP5C	28902	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	47142195	47142976	47142503	Y	NA	CALM3,DACT3	NA	NA	NA	NA	DACT3	19419	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	47613231	47613789	47613256	Y	PRKD2,STRN4,NAPA,GPR77,DHX34,CCDC9,C5AR1,BBC3,ZC3H4	SAE1,ZC3H4	TMEM160,NPAS1	IMR90	Hi-C	24141950	SAE1	742	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	47742856	47743228	47743000	Y	NA	MIR3191,BBC3,CCDC9,PRR24	NA	NA	NA	NA	BBC3	8833	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	47744387	47744529	47744512	Y	SLC8A2	MIR3191,BBC3,CCDC9,PRR24	NA	NA	NA	NA	BBC3	10364	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	47746329	47746738	47746506	Y	SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24	MIR3191,BBC3,CCDC9,PRR24	NA	NA	NA	NA	CCDC9	10499	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	47776748	47776969	47776841	Y	GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1	MIR3191,BBC3,CCDC9,PRR24	NA	NA	NA	NA	PRR24	606	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	48103581	48103982	48103689	Y	GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1	NA	GLTSCR1,NAPA	MCF7	ChIA-PET	22265404	NAPA	87084	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	49057128	49057239	49057162	Y	NA	LMTK3,SULT2B1	NA	NA	NA	NA	SULT2B1	3796	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	49092091	49092636	49092297	Y	BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11	SULT2B1,SPHK2,RPL18,DBP	NA	NA	NA	NA	SPHK2	27912	CAGE	NCI-H1385	hg19	FANTOM5	9.38193981680527
chr19	49466802	49467527	49467169	Y	IZUMO1,PPP1R15A,CD37,FTL	DHDH,BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	244	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	51198423	51198838	51198828	Y	KLK6,KCNC3,ASPDH,LRRC4B,SYT3,SYT3,SHANK1	SHANK1	NA	NA	NA	NA	SHANK1	21869	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr19	51339255	51339614	51339393	Y	KLK14,IGLON5,LRRC4B,SYT3,SYT3	C19orf48	NA	NA	NA	NA	C19orf48	33069	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr19	52192085	52192767	52192400	Y	ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577	NA	NA	NA	NA	NA	ZNF577	199436	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr19	53727403	53727861	53727738	Y	NA	NA	NA	NA	NA	NA	ZNF415	93073	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	56060798	56061018	56060898	Y	NA	ZNF579,ZNF524	SGK110	K562	ChIA-PET	22265404	ZNF579	29193	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	56097081	56097467	56097273	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581	SSC5D,SGK110,SBK2,ZNF579	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF579	6870	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	56116208	56117068	56116734	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	4872	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr19	58321012	58321020	58321017	Y	VN1R1,ZNF211,ZNF587,ZNF417,ZNF776,ZNF586,ZNF552	ZNF586,ZNF552,ZNF587	NA	NA	NA	NA	ZNF552	3261	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	58413801	58413982	58413868	Y	ZNF154,ZNF418	ZNF417,ZNF418,ZNF256	NA	NA	NA	NA	ZNF417	11996	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr19	58912594	58912944	58912773	Y	ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324	A1BG,ZNF837,RPS5,ZNF584,ZNF132,ZNF324B	NA	NA	NA	NA	ZNF584	1723	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr2	1858495	1858644	1858520	Y	MYT1L	NA	NA	NA	NA	NA	MYT1L	474388	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	1859174	1859261	1859218	Y	NA	NA	NA	NA	NA	NA	MYT1L	473771	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	2468009	2468259	2468065	Y	NA	NA	NA	NA	NA	NA	MYT1L	134977	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr2	2617084	2617480	2617333	Y	NA	NA	NA	NA	NA	NA	MYT1L	284052	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr2	3508183	3508316	3508315	Y	NA	ADI1	NA	NA	NA	NA	ADI1	13191	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	3699787	3700199	3700016	Y	NA	NA	NA	NA	NA	NA	RPS7	78992	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	6912526	6912690	6912595	Y	NA	NA	NA	NA	NA	NA	RNF144A	142833	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	7152754	7152946	7152770	Y	NA	NA	NA	NA	NA	NA	RNF144A	97231	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	8597253	8597584	8597383	Y	KIDINS220	NA	LOC100506274,LINC00299,LOC339788	IMR90	Hi-C	24141950	ID2	219391	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	8712183	8712281	8712245	Y	NA	NA	LINC00299,LOC100506274,ID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ID2	104694	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	10260365	10260994	10260486	Y	ODC1,TAF1B,RRM2,RRM2	NA	NA	NA	NA	NA	RRM2	0	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	11270081	11270242	11270156	Y	KCNF1,C2orf50	PQLC3	NA	NA	NA	NA	PQLC3	23082	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr2	11352501	11352895	11352887	Y	NA	NA	NA	NA	NA	NA	PQLC3	59177	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	11483029	11483376	11483266	Y	NA	ROCK2	NA	NA	NA	NA	ROCK2	3080	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	11884050	11884543	11884432	Y	NA	NA	NA	NA	NA	NA	LPIN1	68329	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	12538008	12538228	12538087	Y	TRIB2	NA	LPIN1,LOC100506474,TRIB2,MIR4262	IMR90	Hi-C	24141950	TRIB2	316787	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	15027568	15027702	15027655	Y	NA	NA	NA	NA	NA	NA	FAM84A	256758	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	19986322	19986559	19986384	Y	TTC32	NA	NA	NA	NA	NA	TTC32	113188	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	20638245	20638508	20638456	Y	HS1BP3	RHOB	HS1BP3,GDF7	IMR90	Hi-C	24141950	RHOB	6327	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr2	23901919	23902357	23902230	Y	UBXN2A	NA	NA	NA	NA	NA	ATAD2B	245627	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	24213695	24213947	24213707	Y	NA	NA	NA	NA	NA	NA	C2orf44	56498	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	27069178	27069486	27069284	Y	NA	DPYSL5	NA	NA	NA	NA	DPYSL5	563	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	27072631	27072808	27072721	Y	CCDC164,MAPRE3,DPYSL5	DPYSL5	NA	NA	NA	NA	DPYSL5	4016	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	27543962	27544264	27544065	Y	NA	SLC30A3,TRIM54,MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17	NA	NA	NA	NA	MPV17	2283	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	27939397	27939784	27939607	Y	TRIM54	AC074091.13	RBKS,BRE,LOC100505716,FOSL2,PLB1	IMR90	Hi-C	24141950	AC074091.13	2798	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	28492364	28492732	28492561	Y	NA	NA	NA	NA	NA	NA	FOSL2	120583	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	28844259	28844848	28844625	Y	FOSL2,TRMT61B,PPP1CB,PPP1CB	NA	NA	NA	NA	NA	PPP1CB	127658	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	33567334	33567407	33567353	Y	NA	NA	NA	NA	NA	NA	FAM98A	255042	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	36603527	36603925	36603600	Y	NA	CRIM1	NA	NA	NA	NA	CRIM1	22458	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	39665108	39665339	39665266	Y	NA	MAP4K3	NA	NA	NA	NA	MAP4K3	2655	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	40767004	40767399	40767181	Y	NA	NA	SLC8A1	IMR90	Hi-C	24141950	SLC8A1	68794	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	43038629	43038924	43038876	Y	NA	NA	THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MTA3	318920	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	43496273	43496611	43496398	Y	NA	ZFP36L2	NA	NA	NA	NA	ZFP36L2	44525	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	44471855	44471912	44471885	Y	NA	NA	NA	NA	NA	NA	PPM1B	78747	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	44577605	44577885	44577745	Y	NA	PREPL,CAMKMT	NA	NA	NA	NA	PREPL	9116	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	45161073	45161475	45161220	Y	SIX3	RP11-89K21.1,SIX3	NA	NA	NA	NA	RP11-89K21.1	2863	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	47796567	47796699	47796698	Y	NA	KCNK12	NA	NA	NA	NA	KCNK12	489	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	56276359	56276680	56276532	Y	NA	NA	NA	NA	NA	NA	CCDC85A	132578	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	60776650	60777166	60776879	Y	REL,BCL11A	BCL11A	NA	NA	NA	NA	BCL11A	1536	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	61385752	61386084	61385930	Y	REL	C2orf74,AHSA2	NA	NA	NA	NA	C2orf74	15509	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	61991278	61991660	61991557	Y	NA	NA	XPO1,FAM161A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM161A	87618	CAGE	NCI-H1385	hg19	FANTOM5	7.81828318067106
chr2	64245195	64245602	64245370	Y	NA	VPS54	NA	NA	NA	NA	VPS54	989	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	64994926	64995226	64995021	Y	SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2	SERTAD2	SERTAD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	18787	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	65657861	65658229	65658008	Y	SLC1A4,SPRED2,SPRED2	SPRED2	NA	NA	NA	NA	SPRED2	90	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	68544914	68545935	68545552	Y	CNRIP1	NA	NA	NA	NA	NA	CNRIP1	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	69536922	69537085	69537004	Y	NA	NA	NA	NA	NA	NA	GFPT1	75297	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	71129017	71129173	71129049	Y	NA	VAX2,ATP6V1B1	NA	NA	NA	NA	VAX2	3297	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	74408934	74409182	74409080	Y	NAT8B,TET3,MOBKL1B	BOLA3,BOLA3-AS1,MOB1A,MTHFD2	NA	NA	NA	NA	MOB1A	4909	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	74647656	74647929	74647851	Y	SLC4A5,SLC4A5,DCTN1,C2orf81	DCTN1,WDR54,RTKN,INO80B,WBP1,MOGS	NA	NA	NA	NA	WDR54	851	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	78464924	78465229	78465077	Y	NA	NA	NA	NA	NA	NA	CTNNA2	945128	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	85186958	85187334	85187145	Y	NA	KCMF1	TMSB10,KCMF1	IMR90	Hi-C	24141950	KCMF1	8882	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	85567649	85568034	85567918	Y	NA	TGOLN2,ELMOD3,RETSAT	TGOLN2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ELMOD3	11483	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	85982713	85983043	85983025	Y	NA	ATOH8	NA	NA	NA	NA	ATOH8	6246	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	86562971	86563338	86563025	Y	REEP1,REEP1	NA	NA	NA	NA	NA	REEP1	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	88899554	88899981	88899832	Y	EIF2AK3	EIF2AK3	NA	NA	NA	NA	EIF2AK3	25113	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	97012594	97012961	97012778	Y	ASTL	SNRNP200,ITPRIPL1,NCAPH	NA	NA	NA	NA	NCAPH	13069	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	100907600	100907945	100907823	Y	NA	LONRF2	NA	NA	NA	NA	LONRF2	29250	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	100908504	100908788	100908727	Y	NA	LONRF2	NA	NA	NA	NA	LONRF2	28407	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	100937334	100937484	100937407	Y	LONRF2	LONRF2	NA	NA	NA	NA	LONRF2	139	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr2	102383406	102383725	102383568	Y	MAP4K4,MAP4K4	NA	NA	NA	NA	NA	MAP4K4	72094	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	102844003	102844653	102844435	Y	IL1R2,IL18RAP,IL1R1	NA	NA	NA	NA	NA	SLC9A2	389513	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	110863536	110863928	110863763	Y	MALL	MALL	NA	NA	NA	NA	MALL	8215	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	112811776	112811937	112811878	Y	ZC3H6	TMEM87B	NA	NA	NA	NA	TMEM87B	976	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	113568769	113568943	113568854	Y	IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B	CKAP2L	NA	NA	NA	NA	CKAP2L	48515	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	115897297	115897567	115897434	Y	DPP10,DPP10,DPP10	DPP10-AS1	NA	NA	NA	NA	DPP10-AS1	19353	CAGE	NCI-H1385	hg19	FANTOM5	6.25462654453684
chr2	115944602	115944633	115944617	Y	DPP10,DPP10,DPP10	DPP10-AS1	NA	NA	NA	NA	DPP10-AS1	27682	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	116280969	116281118	116281045	Y	NA	NA	NA	NA	NA	NA	DPP10-AS1	364049	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	116469497	116469517	116469506	Y	NA	NA	NA	NA	NA	NA	DPP10-AS1	552577	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	121200367	121200763	121200697	Y	NA	NA	NA	NA	NA	NA	INHBB	98648	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	125343251	125343272	125343262	Y	NA	NA	NA	NA	NA	NA	CNTNAP5	562387	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	129994679	129994961	129994820	Y	NA	NA	NA	NA	NA	NA	HS6ST1	920528	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	130928401	130928722	130928538	Y	NA	MZT2B,SMPD4	NA	NA	NA	NA	MZT2B	8588	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	131058181	131058640	131058440	Y	NA	AC068137.13,IMP4,CCDC115	NA	NA	NA	NA	AC068137.13	8786	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr2	131485043	131485533	131485339	Y	NA	AC140481.8	NA	NA	NA	NA	AC140481.8	25919	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	131555592	131555820	131555689	Y	CCDC115	AC140481.8	PLEKHB2,FAM168B	K562,MCF7	ChIA-PET	22265404	AC140481.8	44140	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	134193030	134193115	134193062	Y	NCKAP5	NA	NA	NA	NA	NA	MGAT5	682439	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	142222584	142223129	142223081	Y	NA	NA	NA	NA	NA	NA	LRP1B	664141	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	145078226	145078371	145078292	Y	ZEB2,GTDC1,GTDC1,GTDC1	GTDC1	NA	NA	NA	NA	GTDC1	9764	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	149017229	149017560	149017414	Y	NA	NA	NA	NA	NA	NA	ORC4	240082	CAGE	NCI-H1385	hg19	FANTOM5	142.292753888213
chr2	149645940	149646152	149646140	Y	KIF5C	KIF5C	NA	NA	NA	NA	KIF5C	15121	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	151022837	151023057	151022971	Y	NA	NA	RND3	MCF7	ChIA-PET	22265404	RND3	370468	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	151567491	151567674	151567620	Y	NA	NA	NA	NA	NA	NA	RND3	173966	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	155556801	155556983	155556830	Y	NA	KCNJ3	NA	NA	NA	NA	KCNJ3	3990	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	157659765	157659881	157659802	Y	NA	NA	NA	NA	NA	NA	GPD2	369963	CAGE	NCI-H1385	hg19	FANTOM5	6.25462654453684
chr2	158067838	158068005	158067865	Y	NA	NA	NA	NA	NA	NA	ACVR1C	415512	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	160470388	160470776	160470715	Y	NA	AC009506.1,BAZ2B	NA	NA	NA	NA	BAZ2B	427	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	161208357	161208687	161208675	Y	NA	NA	NA	NA	NA	NA	MIR4785	53706	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	162095171	162095411	162095272	Y	TBR1,SLC4A10	NA	NA	NA	NA	NA	PSMD14	67138	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	162481875	162482596	162482291	Y	NA	NA	NA	NA	NA	NA	SLC4A10	203032	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	163695900	163696326	163696258	Y	NA	KCNH7	NA	NA	NA	NA	KCNH7	2660	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr2	166983519	166983786	166983732	Y	NA	SCN1A	NA	NA	NA	NA	SCN1A	996	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	171671285	171671753	171671591	Y	NA	AC007405.4,AC007405.6,GAD1	NA	NA	NA	NA	GAD1	3562	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	176866139	176866392	176866261	Y	KIAA1715	KIAA1715	NA	NA	NA	NA	KIAA1715	572	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	177518737	177518933	177518835	Y	NA	LINC01116	HOXD10,HOXD11,HOXD8,HOXD-AS2,HOXD9,HOXD4,MIR10B	IMR90	Hi-C	24141950	LINC01116	18078	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	178104644	178105169	178104872	Y	NFE2L2,NFE2L2,HNRNPA3	MIR3128,AC079305.10	NA	NA	NA	NA	MIR3128	13569	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	188464486	188464724	188464607	Y	NA	NA	GULP1	IMR90	Hi-C	24141950	GULP1	689672	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	194142383	194142416	194142400	Y	NA	NA	NA	NA	NA	NA	TMEFF2	1083948	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	197787148	197787421	197787192	Y	NA	PGAP1	NA	NA	NA	NA	PGAP1	3099	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	208007936	208008436	208008192	Y	METTL21A,METTL21A,KLF7,CREB1	KLF7	NA	NA	NA	NA	KLF7	21555	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	208472249	208472458	208472354	Y	NA	METTL21A	NA	NA	NA	NA	METTL21A	16194	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	211406237	211406446	211406310	Y	NA	NA	NA	NA	NA	NA	CPS1	65831	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	217556283	217557311	217557110	Y	NA	IGFBP5	NA	NA	NA	NA	IGFBP5	937	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	219773515	219774011	219773826	Y	USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A	CDK5R2	NA	NA	NA	NA	CDK5R2	48366	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	219827943	219828258	219828078	Y	USP37,STK36,PTPRN,PTPRN,CDK5R2,FEV	CDK5R2,FEV,CRYBA2,AC097468.4	NA	NA	NA	NA	CDK5R2	5566	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr2	219862366	219862575	219862480	Y	FEV	CDK5R2,FEV,CRYBA2,AC097468.4	NA	NA	NA	NA	AC097468.4	2362	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	224428219	224428432	224428353	Y	NA	SCG2	SCG2	IMR90	Hi-C	24141950	SCG2	36789	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	224810635	224810927	224810791	Y	AP1S3	WDFY1,MRPL44	NA	NA	NA	NA	WDFY1	2531	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	226895670	226896158	226895921	Y	NA	NA	IRS1	IMR90	Hi-C	24141950	NYAP2	632306	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	227665859	227666449	227665964	Y	NA	RHBDD1	NA	NA	NA	NA	RHBDD1	31848	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	230736228	230736612	230736477	Y	SP110	FBXO36,TRIP12	NA	NA	NA	NA	FBXO36	48406	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	232229850	232230117	232229960	Y	NA	NA	NA	NA	NA	NA	NCL	116235	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	232468888	232470128	232469532	Y	DIS3L2,PTMA,NMUR1	NA	NA	NA	NA	NA	LINC00471	91838	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr2	232470282	232470477	232470427	Y	NA	NA	NA	NA	NA	NA	LINC00471	93232	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr2	233353154	233353413	233353362	Y	ECEL1,PRSS56	ECEL1	NA	NA	NA	NA	ECEL1	2616	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	233367792	233368150	233367876	Y	ALPP,GIGYF2,ALPI,ECEL1,PRSS56,TIGD1	ECEL1,EIF4E2,TIGD1	MIR1471,ECEL1P2	IMR90	Hi-C	24141950	ECEL1	17254	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	237482983	237483115	237483021	Y	NA	NA	NA	NA	NA	NA	AC079135.1	408893	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	238582267	238582825	238582560	Y	LRRFIP1	LRRFIP1	NA	NA	NA	NA	LRRFIP1	48048	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	238616188	238616491	238616226	Y	ILKAP,LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	81969	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	239870450	239870747	239870599	Y	NA	NA	LOC151171,TRAF3IP1,FLJ43879,MIR4786,TWIST2,HDAC4	IMR90	Hi-C	24141950	AC062017.1	450383	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr2	241845496	241845803	241845554	Y	NA	C2orf54	LOC200772,SNED1,MTERFD2	IMR90	Hi-C	24141950	C2orf54	11190	CAGE	NCI-H1385	hg19	FANTOM5	7.81828318067106
chr20	5553446	5553705	5553635	Y	NA	GPCPD1	NA	NA	NA	NA	GPCPD1	35967	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	5825010	5825403	5825098	Y	NA	NA	NA	NA	NA	NA	CHGB	64673	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	8737014	8737369	8737294	Y	NA	NA	NA	NA	NA	NA	PLCB4	310041	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr20	13434936	13435260	13435184	Y	NA	NA	NA	NA	NA	NA	TASP1	182327	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	18565876	18566072	18565973	Y	CSRP2BP,ZNF133,POLR3F,SEC23B,SEC23B,SEC23B,DTD1	LINC00493,DTD1	NA	NA	NA	NA	DTD1	465	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	19889354	19889507	19889429	Y	NA	NA	NA	NA	NA	NA	NAA20	106253	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	20344554	20345237	20344967	Y	NA	INSM1	INSM1	IMR90	Hi-C	24141950	INSM1	1528	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr20	20391161	20391545	20391351	Y	NA	INSM1	NA	NA	NA	NA	INSM1	44396	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	21082914	21083089	21083038	Y	NA	PLK1S1	PLK1S1,NKX2-2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PLK1S1	21535	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	23008232	23008345	23008289	Y	NA	NA	NA	NA	NA	NA	NXT1	321028	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	23084032	23084273	23084186	Y	THBD,CD93,GZF1	NA	NA	NA	NA	NA	NXT1	245100	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	23271772	23272010	23271878	Y	CST9	NA	THBD	IMR90	Hi-C	24141950	NXT1	57363	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	26116339	26116766	26116505	Y	NA	NA	NA	NA	NA	NA	RP13-401N8.1	386485	CAGE	NCI-H1385	hg19	FANTOM5	10.1637681348724
chr20	30191850	30192346	30192159	Y	ID1	ID1	NA	NA	NA	NA	ID1	764	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr20	30196293	30196740	30196417	Y	ID1	ID1	NA	NA	NA	NA	ID1	5207	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	30796713	30797081	30796897	Y	NA	PLAGL2,POFUT1	NA	NA	NA	NA	POFUT1	3030	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	31045263	31045487	31045417	Y	KIF3B	NA	NA	NA	NA	NA	ASXL1	101108	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr20	33150860	33150919	33150894	Y	NA	DYNLRB1	NA	NA	NA	NA	DYNLRB1	48646	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	34652590	34653055	34652672	Y	NA	NA	LOC647979,PHF20,SCAND1,C20orf152,EPB41L1	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	SCAND1	107196	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr20	35464098	35464342	35464182	Y	RBL1,DSN1,DSN1	NA	NA	NA	NA	NA	DSN1	63877	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	37302978	37303466	37303191	Y	ACTR5,SLC32A1	SLC32A1	ARHGAP40,ACTR5,SLC32A1,PPP1R16B	IMR90	Hi-C	24141950	SLC32A1	47639	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	40210012	40210373	40210193	Y	NA	CHD6	NA	NA	NA	NA	CHD6	34760	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	40321359	40321668	40321514	Y	NA	NA	CHD6	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHD6	76226	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	47750965	47751079	47750977	Y	ZNFX1	NA	NA	NA	NA	NA	STAU1	51825	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	48533898	48534043	48533948	Y	B4GALT5,SLC9A8,CEBPB,SPATA2,SNAI1,RNF114	SPATA2,RNF114	NA	NA	NA	NA	SPATA2	3818	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	48770876	48771106	48770991	Y	NA	UBE2V1,TMEM189-UBE2V1,TMEM189,CEBPB	NA	NA	NA	NA	TMEM189	2541	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	48924890	48925591	48925260	Y	SLC9A8,RNF114,SNAI1,TMEM189,CEBPB,PTPN1	NA	NA	NA	NA	NA	CEBPB	119514	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr20	49407275	49407470	49407371	Y	MOCS3	BCAS4	ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3	MCF7,K562	ChIA-PET	22265404	BCAS4	1961	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr20	50383575	50384083	50383723	Y	ATP9A	ATP9A	NA	NA	NA	NA	ATP9A	402	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	52483715	52484176	52483911	Y	NA	NA	NA	NA	NA	NA	PFDN4	338210	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	61505589	61505880	61505712	Y	BHLHE23,DIDO1,C20orf11	TCFL5	TCFL5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TCFL5	14474	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	61506279	61506510	61506352	Y	BHLHE23,TCFL5,DIDO1,C20orf11	TCFL5	TCFL5	MCF7,K562	ChIA-PET	22265404	TCFL5	15164	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	62494990	62495823	62495679	Y	NA	TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	TPD52L2	394	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr20	62793391	62793466	62793434	Y	NA	MYT1	NA	NA	NA	NA	MYT1	12247	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	9881917	9882087	9882000	Y	NA	NA	NA	NA	NA	NA	TEKT4P2	84498	CAGE	NCI-H1385	hg19	FANTOM5	10.1637681348724
chr21	17959400	17959753	17959559	Y	NA	NA	NA	NA	NA	NA	SNORD74	304311	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr21	17960667	17961305	17960883	Y	NA	NA	NA	NA	NA	NA	SNORD74	305578	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr21	18984370	18984546	18984496	Y	NA	BTG3	NA	NA	NA	NA	BTG3	1105	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	23435216	23435382	23435330	Y	NA	NA	NA	NA	NA	NA	NCAM2	1066583	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	30374865	30375265	30375125	Y	C21orf7,N6AMT1,LTN1,USP16	LTN1,RWDD2B,USP16	LTN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LTN1	11595	CAGE	NCI-H1385	hg19	FANTOM5	7.03645486260395
chr21	38935728	38936411	38936235	Y	TTC3,DYRK1A,DYRK1A	NA	DSCR3,DSCR9,DYRK1A,KCNJ6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DYRK1A	199636	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	38936686	38937128	38936852	Y	DYRK1A,DYRK1A	NA	DSCR3,DSCR9,DYRK1A,KCNJ6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DYRK1A	200594	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	41729839	41730224	41730032	Y	NA	NA	NA	NA	NA	NA	DSCAM	486841	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	42213096	42213280	42213166	Y	DSCAM	DSCAM	NA	NA	NA	NA	DSCAM	3785	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	42619630	42619951	42619670	Y	NA	NA	NA	NA	NA	NA	FAM3B	54188	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr21	44597156	44597534	44597315	Y	SIK1	NA	NA	NA	NA	NA	U2AF1	71459	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	44598375	44598751	44598475	Y	NA	NA	NA	NA	NA	NA	U2AF1	72678	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr21	44753292	44753457	44753456	Y	NA	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	91551	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	44850435	44851222	44850996	Y	CBS	SIK1	CRYAA,SIK1,HSF2BP,LINC00313,LINC00319,RRP1B	IMR90	Hi-C	24141950	SIK1	5427	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr21	44860778	44861412	44860950	Y	SIK1	SIK1	NA	NA	NA	NA	SIK1	15770	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr21	47167832	47168236	47167895	Y	NA	NA	PCBP3,LOC100129027	IMR90	Hi-C	24141950	PCBP3	106224	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr22	19159081	19159242	19159165	Y	NA	DGCR14,SLC25A1	NA	NA	NA	NA	SLC25A1	5101	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	22010846	22011267	22010978	Y	YPEL1	YDJC,SDF2L1,PPIL2	NA	NA	NA	NA	PPIL2	6287	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr22	22011632	22012115	22011859	Y	NA	YDJC,SDF2L1,PPIL2	NA	NA	NA	NA	PPIL2	7073	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	23907888	23908026	23907993	Y	IGLL1	NA	NA	NA	NA	NA	GUSBP11	149517	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	23908349	23908676	23908605	Y	NA	NA	NA	NA	NA	NA	GUSBP11	148867	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	25348731	25349104	25348989	Y	NA	NA	SGSM1,KIAA1671,TMEM211	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SGSM1	148495	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	27041081	27041748	27041447	Y	SEZ6L,ASPHD2	MIAT,CTA-211A9.5	MIAT	IMR90	Hi-C	24141950	MIAT	689	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr22	27043800	27044733	27044318	Y	SEZ6L	MIAT,CTA-211A9.5	NA	NA	NA	NA	MIAT	3408	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr22	27054967	27055259	27055032	Y	SEZ6L,ASPHD2	MIAT,CTA-211A9.5	NA	NA	NA	NA	CTA-211A9.5	11471	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	29319930	29320200	29320120	Y	NA	ZNRF3	NA	NA	NA	NA	ZNRF3	42350	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	30591785	30593544	30592394	Y	NA	LIF	NA	NA	NA	NA	LIF	47296	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	30649196	30649657	30649496	Y	MTMR3,TBC1D10A,SF3A1,DUSP18,LIF,OSM	LIF,GATSL3	NA	NA	NA	NA	LIF	8356	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	31219107	31219239	31219180	Y	NA	NA	NA	NA	NA	NA	TUG1	145424	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	36728624	36729163	36728912	Y	IFT27	NA	NA	NA	NA	NA	MYH9	52900	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	39091291	39091422	39091336	Y	NA	CBY1,RP3-508I15.9,TOMM22,JOSD1,GTPBP1	NA	NA	NA	NA	JOSD1	4139	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	41047729	41047883	41047796	Y	NA	MKL1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17023	CAGE	NCI-H1385	hg19	FANTOM5	4.69096990840263
chr22	41048065	41048352	41048232	Y	EP300,MKL1	MKL1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17359	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr22	41809427	41810696	41809981	Y	CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF	TEF,TOB2	NA	NA	NA	NA	TOB2	30331	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr22	44856761	44856923	44856842	Y	NA	NA	PARVB,PARVG,SAMM50,KIAA1644,LINC00229	IMR90	Hi-C	24141950	PARVB	463670	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	44993593	44993881	44993680	Y	NA	NA	NA	NA	NA	NA	PHF21B	409999	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	46957537	46957704	46957620	Y	NA	CELSR1,GRAMD4	TRMU,CELSR1,GRAMD4	IMR90	Hi-C	24141950	GRAMD4	12205	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	49768624	49768992	49768711	Y	NA	NA	NA	NA	NA	NA	BRD1	450168	CAGE	NCI-H1385	hg19	FANTOM5	35.1822743130197
chr22	49843892	49843993	49843957	Y	NA	NA	NA	NA	NA	NA	BRD1	375167	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	50327730	50328489	50328002	Y	TRABD,SELO,PIM3,PANX2,HDAC10,BRD1	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	17624	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr22	50329443	50330313	50330025	Y	TUBGCP6,TRABD,PIM3,PANX2,HDAC10,BRD1	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	19337	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr22	50330725	50331030	50330945	Y	MAPK12,MAPK11	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	20619	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	50344780	50345228	50344944	Y	NA	CRELD2,ALG12,PIM3	PLXNB2	MCF7	ChIA-PET	22265404	PIM3	6933	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr22	50364350	50364715	50364589	Y	NA	PIM3	NA	NA	NA	NA	PIM3	12189	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	50414821	50415138	50414874	Y	BRD1,TUBGCP6,TRABD,PANX2,HDAC10,PIM3	NA	NA	NA	NA	NA	PIM3	62660	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	50710173	50710402	50710310	Y	MLC1,MOV10L1,MOV10L1,MOV10L1,SHANK3,SBF1,PPP6R2,MAPK8IP2,MAPK8IP2,FAM116B,ACR,MAPK11	TUBGCP6,HDAC10,MAPK12,MAPK11,PLXNB2	NA	NA	NA	NA	MAPK11	2977	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr22	50769449	50769513	50769481	Y	MOV10L1	PLXNB2,PPP6R2	PLXNB2,FAM116B	MCF7	ChIA-PET	22265404	PPP6R2	10220	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	3532969	3532987	3532979	Y	NA	NA	NA	NA	NA	NA	CRBN	313575	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	13493281	13493606	13493395	Y	NA	NUP210,HDAC11	IQSEC1,NUP210	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HDAC11	25618	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	15675662	15676068	15675826	Y	NA	BTD,HACL1	NA	NA	NA	NA	HACL1	34324	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	16324333	16324353	16324342	Y	NA	DPH3,OXNAD1	NA	NA	NA	NA	OXNAD1	19627	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	19188369	19188866	19188531	Y	NA	KCNH8	NA	NA	NA	NA	KCNH8	423	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	22060274	22060563	22060426	Y	NA	NA	NA	NA	NA	NA	HMGB1P5	360747	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	31149741	31150063	31149903	Y	NA	NA	NA	NA	NA	NA	STT3B	422067	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	31737462	31737733	31737598	Y	NA	NA	NA	NA	NA	NA	STT3B	165332	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	32463504	32463726	32463567	Y	CMTM6	NA	NA	NA	NA	NA	CMTM6	79174	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr3	37218637	37218971	37218954	Y	DCLK3,TRANK1,C3orf35	LRRFIP2	MLH1	IMR90	Hi-C	24141950	LRRFIP2	4209	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr3	43935699	43936111	43935927	Y	NA	NA	NA	NA	NA	NA	ANO10	204613	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	44036592	44036799	44036686	Y	NA	NA	NA	NA	NA	NA	ANO10	305506	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr3	44038399	44038801	44038781	Y	NA	NA	NA	NA	NA	NA	ANO10	307313	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr3	44040259	44040834	44040651	Y	NA	NA	ANO10	IMR90	Hi-C	24141950	ANO10	309173	CAGE	NCI-H1385	hg19	FANTOM5	23.4548495420132
chr3	45157727	45158120	45157925	Y	CDCP1	CDCP1	NA	NA	NA	NA	CDCP1	27794	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	49358291	49358883	49358713	Y	ARIH2,C3orf71,NDUFAF3,DALRD3,QRICH1,USP19,UBA7,IP6K1,USP4	USP4,GPX1	NA	NA	NA	NA	USP4	17262	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	50264852	50265230	50265012	Y	TUSC2,IP6K1,GNAI2,GNAI2	GNAI2	NA	NA	NA	NA	GNAI2	3128	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr3	50629910	50630235	50630098	Y	MAPKAPK3,CISH	HEMK1,C3orf18,MAPKAPK3,CISH	NA	NA	NA	NA	MAPKAPK3	16716	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	52143667	52143964	52143845	Y	NA	POC1A	NA	NA	NA	NA	POC1A	42742	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	53304049	53304491	53304265	Y	PRKCD,DCP1A,TKT	TKT	NA	NA	NA	NA	TKT	15981	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	55707711	55707857	55707784	Y	NA	NA	NA	NA	NA	NA	ERC2	792534	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	62427415	62427809	62427798	Y	FEZF2,CADPS	NA	NA	NA	NA	NA	PTPRG-AS1	74410	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	63629436	63629448	63629442	Y	NA	NA	NA	NA	NA	NA	THOC7	218131	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	69790676	69790712	69790690	Y	MITF	MITF	NA	NA	NA	NA	MITF	4090	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	71151319	71151713	71151657	Y	NA	NA	NA	NA	NA	NA	FOXP1	479427	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	79557050	79557111	79557081	Y	ROBO1	NA	NA	NA	NA	NA	ROBO1	257854	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	85011127	85011790	85011174	Y	NA	CADM2	NA	NA	NA	NA	CADM2	4995	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	85479934	85479951	85479943	Y	NA	NA	NA	NA	NA	NA	CADM2	473802	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	87101402	87101690	87101545	Y	NA	NA	NA	NA	NA	NA	CHMP2B	172731	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	89352653	89353050	89352849	Y	EPHA3	NA	NA	NA	NA	NA	EPHA3	197979	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	105087492	105087848	105087688	Y	NA	ALCAM	NA	NA	NA	NA	ALCAM	3739	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	105087916	105088171	105088021	Y	ALCAM	ALCAM	NA	NA	NA	NA	ALCAM	4163	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	105838688	105838919	105838809	Y	NA	NA	CBLB	MCF7	ChIA-PET	22265404	CBLB	252292	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	111816359	111816505	111816432	Y	C3orf52	C3orf52	NA	NA	NA	NA	C3orf52	13177	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	114813239	114813371	114813303	Y	NA	NA	NA	NA	NA	NA	ZBTB20	50747	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	115503263	115503751	115503546	Y	NA	NA	NA	NA	NA	NA	GAP43	163092	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr3	115696572	115696769	115696673	Y	NA	NA	NA	NA	NA	NA	GAP43	356401	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	115717910	115718046	115717986	Y	NA	NA	NA	NA	NA	NA	GAP43	377739	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr3	115771171	115771507	115771363	Y	NA	NA	NA	NA	NA	NA	GAP43	431000	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	115843003	115843038	115843021	Y	NA	NA	NA	NA	NA	NA	GAP43	502832	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	116145742	116145918	116145863	Y	NA	NA	NA	NA	NA	NA	PTMAP8	597627	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	117441757	117441996	117441951	Y	NA	NA	NA	NA	NA	NA	LSAMP	272099	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	117715221	117715404	117715326	Y	NA	LSAMP,RP11-384F7.2	NA	NA	NA	NA	RP11-384F7.2	782	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	120493479	120494008	120493729	Y	NA	GTF2E1,RABL3	NA	NA	NA	NA	RABL3	33639	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	121778262	121778510	121778467	Y	EAF2,CD86	NA	NA	NA	NA	NA	EAF2	226232	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	125554978	125555354	125555286	Y	NA	NA	NA	NA	NA	NA	OSBPL11	243044	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	125709142	125709481	125709414	Y	ZXDC,CCDC37	NA	NA	NA	NA	NA	RP11-124N2.1	91582	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr3	126292509	126292856	126292714	Y	NA	TXNRD3NB	NA	NA	NA	NA	TXNRD3NB	32542	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	128336521	128336831	128336572	Y	DNAJB8	NA	NA	NA	NA	NA	RPN1	61087	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	128745839	128746109	128746044	Y	NA	KIAA1257	NA	NA	NA	NA	KIAA1257	26306	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	141319185	141319480	141319327	Y	RASA2	NA	NA	NA	NA	NA	RASA2	115296	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	156252887	156253352	156253202	Y	NA	SSR3	NA	NA	NA	NA	SSR3	17621	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	156443600	156443618	156443611	Y	LEKR1,LEKR1,CCNL1,TIPARP,TIPARP,TIPARP	NA	NA	NA	NA	NA	TIPARP-AS1	53433	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	156784451	156784922	156784633	Y	PTX3,C3orf55	NA	NA	NA	NA	NA	CCNL1	91627	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	158440805	158440990	158440882	Y	MFSD1	MFSD1	NA	NA	NA	NA	MFSD1	6997	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	169872442	169872609	169872497	Y	NA	PHC3	NA	NA	NA	NA	PHC3	24928	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	183003579	183004143	183003750	Y	ATP11B,B3GNT5,KLHL6,KLHL24	B3GNT5	NA	NA	NA	NA	B3GNT5	34547	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr3	183980250	183980567	183980542	Y	CAMK2N2,ECE2	ALG3,ECE2,CAMK2N2,PSMD2,EIF4G1	NA	NA	NA	NA	CAMK2N2	2999	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	184523233	184523425	184523324	Y	VPS8	VPS8	VPS8,CHRD,THPO,EPHB3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	VPS8	4506	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	192997761	192997785	192997774	Y	NA	HRASLS	NA	NA	NA	NA	HRASLS	40847	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	193857372	193857551	193857481	Y	HES1	HES1	NA	NA	NA	NA	HES1	5438	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	193859199	193859624	193859359	Y	TMEM44	HES1	NA	NA	NA	NA	HES1	7265	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr3	194979031	194979323	194979161	Y	NA	XXYLT1	NA	NA	NA	NA	XXYLT1	10573	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr3	196696811	196697020	196696957	Y	LRRC33,PIGZ	NCBP2,PIGZ,MFI2-AS1	NA	NA	NA	NA	PIGZ	2880	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	1966776	1967112	1967086	Y	WHSC1,WHSC1	NA	NA	NA	NA	NA	C4orf48	74577	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	2414575	2415364	2414914	Y	HAUS3,TNIP2,TNIP2,SH3BP2,SH3BP2,SH3BP2,ZFYVE28,RNF4,RNF4,LOC402160	ZFYVE28,RNF4	NA	NA	NA	NA	ZFYVE28	3026	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	2537711	2538436	2538089	Y	NA	NA	NA	NA	NA	NA	RNF4	75764	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	6785099	6785509	6785391	Y	TBC1D14,TBC1D14,TADA2B,KIAA0232	KIAA0232	NA	NA	NA	NA	KIAA0232	3997	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	15651682	15652058	15651870	Y	NA	FAM200B,FBXL5	NA	NA	NA	NA	FAM200B	29227	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	23879721	23879980	23879976	Y	NA	PPARGC1A	NA	NA	NA	NA	PPARGC1A	23732	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	24043691	24044033	24043870	Y	NA	NA	PPARGC1A	IMR90	Hi-C	24141950	PPARGC1A	139979	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	24472474	24473298	24472910	Y	NA	NA	PPARGC1A,DHX15,CCDC149,SOD3,PI4K2B,ANAPC4,LGI2,SEPSECS	IMR90	Hi-C	24141950	DHX15	110875	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	32028735	32028753	32028744	Y	NA	NA	NA	NA	NA	NA	PCDH7	1308698	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	38859134	38859762	38859410	Y	KLF3,KLHL5,TLR1,TLR6	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	TLR1,TLR6	2696	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	54568898	54569145	54569018	Y	CHIC2	NA	SCFD2,LNX1,PDGFRA,FIP1L1,RPL21P44,CHIC2	IMR90	Hi-C	24141950	FIP1L1	327088	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	54958023	54958135	54958077	Y	NA	CHIC2	SCFD2,CHIC2	IMR90	Hi-C	24141950	CHIC2	29166	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	57831930	57832208	57832081	Y	NA	POLR2B,NOA1	NA	NA	NA	NA	POLR2B	9680	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	62068799	62069364	62069049	Y	LPHN3	LPHN3	NA	NA	NA	NA	LPHN3	3823	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	66392114	66392503	66392309	Y	NA	NA	NA	NA	NA	NA	RP11-807H7.1	141176	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	77511406	77511861	77511558	Y	ANKRD56,SHROOM3	NA	NA	NA	NA	NA	SHROOM3	157153	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	77931984	77932418	77932077	Y	NA	NA	NA	NA	NA	NA	CCNI	62740	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	78656019	78656351	78656260	Y	NA	NA	NA	NA	NA	NA	CNOT6L	82418	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	78708574	78708903	78708795	Y	CNOT6L	CNOT6L	NA	NA	NA	NA	CNOT6L	29866	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	78979777	78980204	78980085	Y	NA	FRAS1	NA	NA	NA	NA	FRAS1	3053	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	84887961	84887976	84887969	Y	NA	NA	NA	NA	NA	NA	AGPAT9	432894	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	86664396	86664842	86664610	Y	ARHGAP24	NA	NA	NA	NA	NA	WDFY3	778852	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	87626625	87626818	87626720	Y	PTPN13	NA	NA	NA	NA	NA	PTPN13	113157	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	88480312	88480555	88480436	Y	NA	NA	NA	NA	NA	NA	NUDT9	138578	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	88480669	88480961	88480822	Y	NA	NA	NA	NA	NA	NA	NUDT9	138935	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	89922113	89922454	89922284	Y	NA	NA	NA	NA	NA	NA	FAM13A	108095	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	91049597	91049943	91049669	Y	FAM190A	NA	NA	NA	NA	NA	SNCA	292131	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	93226334	93226694	93226354	Y	GRID2	GRID2	NA	NA	NA	NA	GRID2	2784	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr4	93226746	93226922	93226838	Y	GRID2	GRID2	NA	NA	NA	NA	GRID2	3196	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr4	93555263	93555546	93555317	Y	GRID2	NA	NA	NA	NA	NA	GRID2	331713	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	93695522	93695754	93695563	Y	GRID2	NA	NA	NA	NA	NA	GRID2	471972	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	93938951	93939057	93939003	Y	NA	NA	NA	NA	NA	NA	GRID2	715401	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	110320309	110320596	110320490	Y	LRIT3	SEC24B	OSTC,AGXT2L1,COL25A1,CFI	IMR90	Hi-C	24141950	SEC24B	32332	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	111114926	111115298	111115104	Y	GAR1,ELOVL6,ELOVL6	ELOVL6	NA	NA	NA	NA	ELOVL6	3057	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	120205306	120205694	120205553	Y	NA	C4orf3	NA	NA	NA	NA	C4orf3	17906	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	125354669	125354869	125354769	Y	NA	NA	ANKRD50	MCF7	ChIA-PET	22265404	ANKRD50	277018	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	131082218	131082340	131082279	Y	NA	NA	NA	NA	NA	NA	SCLT1	1069454	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	139177153	139177364	139177274	Y	SLC7A11	SLC7A11	SLC7A11	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC7A11	15650	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	139831999	139832463	139832295	Y	NA	NA	LOC641365,SLC7A11,LOC641364	IMR90	Hi-C	24141950	CCRN4L	102480	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr4	140656102	140656508	140656327	Y	MAML3	NA	NA	NA	NA	NA	MGST2	71180	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	140891718	140892054	140891918	Y	NA	NA	NA	NA	NA	NA	MAML3	181284	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	140970177	140970718	140970535	Y	NA	NA	NA	NA	NA	NA	MAML3	102620	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr4	141218386	141218686	141218436	Y	MAML3,SCOC	SCOC	NA	NA	NA	NA	SCOC	41946	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr4	142564611	142565296	142564927	Y	ZNF330,IL15	NA	NA	NA	NA	NA	RP11-362F19.1	312839	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	142984215	142984339	142984277	Y	NA	NA	NA	NA	NA	NA	RP11-362F19.1	732443	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	146856855	146857112	146856936	Y	NA	ZNF827	NA	NA	NA	NA	ZNF827	675	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	148426409	148426782	148426596	Y	NA	NA	NA	NA	NA	NA	TMEM184C	109752	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	152367520	152367754	152367585	Y	NA	FAM160A1	NA	NA	NA	NA	FAM160A1	39152	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	153180278	153180573	153180364	Y	NA	NA	PET112,FAM160A1,FBXW7	IMR90	Hi-C	24141950	FBXW7	274680	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	153412522	153412921	153412842	Y	NA	FBXW7,MIR4453	NA	NA	NA	NA	FBXW7	42332	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	153858553	153859077	153858605	Y	TRIM2,FHDC1	FHDC1	ARFIP1,FHDC1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FHDC1	3049	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	153884926	153884958	153884941	Y	NA	FHDC1	NA	NA	NA	NA	FHDC1	29422	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr4	154170296	154170804	154170469	Y	TIGD4,KIAA0922	NA	NA	NA	NA	NA	MND1	92997	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	158219771	158220072	158219781	Y	NA	NA	NA	NA	NA	NA	GRIA2	96437	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	158883602	158883623	158883612	Y	NA	NA	NA	NA	NA	NA	FAM198B	208847	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr4	159103850	159104073	159103996	Y	NA	FAM198B	NA	NA	NA	NA	FAM198B	11380	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	160195976	160196239	160196029	Y	RAPGEF2	NA	NA	NA	NA	NA	FNIP2	507686	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	162371144	162371411	162371278	Y	NA	NA	NA	NA	NA	NA	FSTL5	711776	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	164688247	164688444	164688347	Y	NA	NA	NA	NA	NA	NA	NAF1	602174	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr4	164876357	164876532	164876526	Y	NA	NA	NA	NA	NA	NA	NAF1	790284	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	174112212	174112389	174112298	Y	NA	GALNT7	NA	NA	NA	NA	GALNT7	24308	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	184328356	184328744	184328447	Y	CDKN2AIP	CDKN2AIP	WWC2,ODZ3,C4orf38,CLDN24,CLDN22,CDKN2AIP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CDKN2AIP	35000	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	184485137	184485268	184485203	Y	NA	NA	RWDD4	IMR90	Hi-C	24141950	ING2	60990	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	184718887	184719489	184719407	Y	NA	NA	ENPP6,CASP3	IMR90	Hi-C	24141950	STOX2	53095	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	186432179	186432538	186432506	Y	NA	CCDC110,PDLIM3	NA	NA	NA	NA	PDLIM3	22228	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	186481104	186481365	186481225	Y	NA	PDLIM3	PDLIM3,SORBS2	IMR90	Hi-C	24141950	PDLIM3	26338	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr4	189361062	189361328	189361166	Y	NA	NA	NA	NA	NA	NA	ZFP42	446137	CAGE	NCI-H1385	hg19	FANTOM5	7.81828318067106
chr4	190936592	190936699	190936668	Y	NA	NA	NA	NA	NA	NA	FRG1	76649	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	53990	54174	54063	Y	PLEKHG4B,C5orf55	NA	LRRC14B,CCDC127,PLEKHG4B,SDHA	IMR90	Hi-C	24141950	CCDC127	162156	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr5	373695	374160	373984	Y	EXOC3	NA	NA	NA	NA	NA	C5orf55	67098	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	399875	400445	400189	Y	EXOC3	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	40813	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	672861	673336	673024	Y	NA	TPPP	NA	NA	NA	NA	TPPP	18174	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	784651	785023	784908	Y	ZDHHC11,TPPP	NA	NA	NA	NA	NA	TPPP	93141	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr5	1316464	1316882	1316563	Y	TERT,SLC6A3	CLPTM1L	TERT	IMR90	Hi-C	24141950	CLPTM1L	26332	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	1501941	1502569	1502322	Y	LPCAT1	LPCAT1	NA	NA	NA	NA	LPCAT1	19523	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	1506387	1506607	1506390	Y	NA	LPCAT1	SLC6A3	IMR90	Hi-C	24141950	LPCAT1	15485	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	6712873	6713977	6713364	Y	NA	NA	NA	NA	NA	NA	RP11-332J15.3	50027	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr5	14011107	14011342	14011264	Y	NA	NA	TRIO	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAH5	68455	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	14142803	14143164	14142969	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	992	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	30694167	30694547	30694365	Y	NA	NA	NA	NA	NA	NA	CDH6	497310	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr5	34001406	34001643	34001533	Y	AMACR	AMACR	NA	NA	NA	NA	AMACR	4577	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	36174356	36174616	36174412	Y	SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	24265	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	38660472	38660667	38660594	Y	LIFR	NA	EGFLAM,LIFR	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LIFR	54016	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	42994649	42995346	42995172	Y	NA	CTD-2035E11.3	NA	NA	NA	NA	CTD-2035E11.3	21185	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	43007637	43008177	43007831	Y	NA	CTD-2035E11.3	NA	NA	NA	NA	CTD-2035E11.3	8354	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	58866470	58866828	58866806	Y	NA	NA	NA	NA	NA	NA	PART1	914712	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	60736184	60736544	60736365	Y	NA	NA	NA	NA	NA	NA	RPL3P6	50486	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	71852712	71853181	71852905	Y	TNPO1	NA	TNPO1,ZNF366,PTCD2	IMR90	Hi-C	24141950	MRPS27	238239	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	72118223	72118546	72118402	Y	TNPO1	TNPO1	NA	NA	NA	NA	TNPO1	8084	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	76928376	76928558	76928504	Y	NA	WDR41	NA	NA	NA	NA	WDR41	13940	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr5	77589539	77589820	77589680	Y	AP3B1	AP3B1	NA	NA	NA	NA	AP3B1	960	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	79768084	79768333	79768119	Y	NA	CTD-2015H6.3	NA	NA	NA	NA	CTD-2015H6.3	13549	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	80216788	80217158	80217017	Y	NA	NA	RASGRF2,MSH3	IMR90	Hi-C	24141950	DHFR	267986	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	80989989	80990372	80990282	Y	NA	NA	NA	NA	NA	NA	SSBP2	55244	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	87956632	87957169	87956907	Y	MEF2C,MEF2C	LINC00461	NA	NA	NA	NA	LINC00461	27689	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	92958001	92958327	92958133	Y	NA	NR2F1	NA	NA	NA	NA	NR2F1	40958	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	102091646	102092087	102091846	Y	NA	PAM	NA	NA	NA	NA	PAM	3961	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	106837531	106838094	106837969	Y	NA	NA	NA	NA	NA	NA	FBXL17	877705	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	107004755	107005118	107004922	Y	NA	NA	NA	NA	NA	NA	FBXL17	710681	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr5	111018976	111019194	111019085	Y	C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	NA	NA	NA	NA	NA	STARD4	172688	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	118670685	118671156	118670901	Y	TNFAIP8	NA	NA	NA	NA	NA	TNFAIP8	68298	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	123966351	123966687	123966497	Y	NA	NA	NA	NA	NA	NA	ZNF608	115813	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	124085012	124085124	124085092	Y	NA	ZNF608	ZNF608	IMR90	Hi-C	24141950	ZNF608	2512	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	131629178	131629624	131629352	Y	FNIP1,IRF1,SLC22A4	P4HA2	NA	NA	NA	NA	P4HA2	170	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr5	132576270	132576709	132576388	Y	AFF4,ZCCHC10	NA	NA	NA	NA	NA	HSPA4	190616	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	135405259	135405482	135405390	Y	NA	NA	NA	NA	NA	NA	SMAD5	61052	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	136940488	136940640	136940554	Y	NA	SPOCK1	NA	NA	NA	NA	SPOCK1	8420	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	137799770	137800154	137799916	Y	FAM13B,FAM53C,KDM3B,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	591	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr5	137800317	137800564	137800421	Y	FAM13B,FAM53C,KDM3B,ETF1,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	1138	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	138078029	138078389	138078209	Y	NA	AC034243.1	CTNNA1,SIL1,HSPA9,MATR3	IMR90	Hi-C	24141950	AC034243.1	8609	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	138897527	138897822	138897662	Y	MATR3,MATR3,DNAJC18,PSD2	UBE2D2	DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	UBE2D2	6194	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	138965572	138965797	138965632	Y	NA	NA	NA	NA	NA	NA	CXXC5	59087	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	139488718	139489038	139488945	Y	NA	PURA	NRG2,CYSTM1,IGIP	IMR90	Hi-C	24141950	PURA	3356	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	140090601	140091006	140090806	Y	NA	WDR55,HARS2,HARS,ZMAT2,VTRNA1-1	NA	NA	NA	NA	VTRNA1-1	1741	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	140381838	140382244	140382041	Y	DND1,PCDHAC1,PCDHAC2,PCDHAC2	PCDHAC2	NA	NA	NA	NA	PCDHAC2	38018	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	140420005	140420137	140420073	Y	NA	NA	PCDHA1	MCF7	ChIA-PET	22265404	PCDHB2	52090	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	140893513	140893891	140893828	Y	PCDH12,KIAA0141,DIAPH1	NA	NA	NA	NA	NA	DIAPH1	102731	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	141736379	141736797	141736670	Y	ARHGAP26	AC005592.2,SPRY4	NDFIP1,FGF1,SPRY4,GNPDA1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SPRY4	32359	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	143578105	143578377	143578180	Y	YIPF5	YIPF5,KCTD16	NA	NA	NA	NA	KCTD16	29709	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	145498086	145498488	145498483	Y	NA	NA	NA	NA	NA	NA	LARS	61735	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	146047313	146047450	146047388	Y	NA	NA	NA	NA	NA	NA	TCERG1	222439	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr5	152494885	152495216	152495051	Y	NA	NA	NA	NA	NA	NA	MFAP3	921250	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	173369010	173369228	173369031	Y	NA	NA	NA	NA	NA	NA	CPEB4	55727	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	173391031	173391183	173391109	Y	HMP19	NA	NA	NA	NA	NA	CPEB4	77748	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	177042588	177043196	177042926	Y	NSD1,FAM193B	TMED9,B4GALT7	NA	NA	NA	NA	B4GALT7	17487	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr5	178259703	178260206	178260005	Y	ZNF879	ZNF354B,RNU1-39P	ZNF879,AGXT2L2,GRM6,COL23A1	IMR90	Hi-C	24141950	ZNF354B	24748	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr5	180611137	180611357	180611292	Y	MGAT1	CTC-338M12.5,TRIM41	NA	NA	NA	NA	CTC-338M12.5	5567	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	472688	472701	472695	Y	HUS1B,EXOC2	NA	NA	NA	NA	NA	DUSP22	183058	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	711154	711526	711478	Y	DUSP22,EXOC2	EXOC2	NA	NA	NA	NA	EXOC2	20037	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	1060093	1060393	1060133	Y	NA	NA	NA	NA	NA	NA	EXOC2	368976	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	3160462	3160701	3160583	Y	NA	BPHL,TUBB2A	NA	NA	NA	NA	TUBB2A	4702	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr6	3238745	3238826	3238788	Y	NA	PSMG4,TUBB2B	NA	NA	NA	NA	TUBB2B	8781	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	5266800	5267044	5266922	Y	NA	LYRM4,FARS2	NA	NA	NA	NA	FARS2	7523	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	6687140	6687567	6687361	Y	NA	NA	RREB1,SSR1,SNRNP48	IMR90	Hi-C	24141950	RREB1	418263	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr6	7137966	7138068	7138020	Y	RIOK1,RIOK1,CAGE1,RREB1,RREB1	RREB1	NA	NA	NA	NA	RREB1	32136	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	14777704	14777964	14777898	Y	JARID2	NA	JARID2	IMR90	Hi-C	24141950	JARID2	466563	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	16771345	16771373	16771363	Y	NA	RP1-151F17.1,ATXN1	ATXN1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	ATXN1	11623	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	16803732	16803856	16803794	Y	NA	RP1-151F17.1,ATXN1	FLJ23152,GMPR,ATXN1	IMR90	Hi-C	24141950	ATXN1	44010	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	17312081	17312238	17312192	Y	RBM24	RBM24	NA	NA	NA	NA	RBM24	32504	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	17703484	17703614	17703560	Y	KDM1B,FAM8A1,NUP153	NUP153	NA	NA	NA	NA	NUP153	1042	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	22149387	22149566	22149505	Y	NA	NA	NA	NA	NA	NA	SOX4	557415	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	25630252	25630438	25630350	Y	SCGN	SCGN	NA	NA	NA	NA	SCGN	20026	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	25992254	25993073	25992840	Y	NA	HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2	NA	NA	NA	NA	HIST1H3A	25645	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr6	26025834	26026125	26026038	Y	BTN2A1,BTN2A1,TRIM38	HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C	NA	NA	NA	NA	HIST1H4B	354	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	26026306	26026795	26026679	Y	HIST1H1D,BTN3A3,BTN3A2,BTN3A2,BTN3A1,HIST1H2BD,HIST1H1E,TRIM38,HIST1H3A	HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C	NA	NA	NA	NA	HIST1H4B	826	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	26266741	26266990	26266911	Y	NA	HIST1H3E,HIST1H1D,HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H3G,HIST1H2APS4,HIST1H2BI,HIST1H4H	NA	NA	NA	NA	HIST1H3G	2622	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	27798416	27798741	27798578	Y	NA	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L	NA	NA	NA	NA	HIST1H4K	1111	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	28072476	28072872	28072543	Y	HIST1H4K,HIST1H2AK,ZNF165,ZSCAN16,ZNF192	ZNF165,ZSCAN16	NA	NA	NA	NA	ZSCAN16	17466	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	29932777	29932958	29932802	Y	HLA-F,TRIM10,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,HLA-A	HLA-K,HLA-A	NA	NA	NA	NA	HLA-A	25740	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr6	29933738	29934144	29933980	Y	NA	HLA-K,HLA-A	NA	NA	NA	NA	HLA-A	26701	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	30247447	30247451	30247450	Y	NA	TRIM39,HCG18	NA	NA	NA	NA	TRIM39	44805	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	30737456	30737900	30737560	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,ABCF1,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3	FLOT1,IER3	DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A,MRPS18B,PPP1R10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	IER3	27125	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	31275830	31276119	31275994	Y	NA	RPL3P2,HLA-B	MUC22,PSORS1C1,C6orf15,PSORS1C2,CCHCR1,HCG26	IMR90	Hi-C	24141950	RPL3P2	29736	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	31702368	31703528	31702658	Y	HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,SKIV2L,PBX2,NEU1,HSPA1L,HSPA1A,GPSM3,ATF6B,AGPAT1,C6orf47,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1	ABHD16A,DDAH2,CLIC1,MSH5,VWA7	NA	NA	NA	NA	CLIC1	2012	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	31789672	31790268	31789876	Y	NA	VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48,NEU1	NA	NA	NA	NA	HSPA1B	3244	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	34191726	34192136	34191830	Y	C6orf1,HMGA1	CYCSP55,HMGA1,C6orf1,RPL35P2	RPS10-NUDT3,NUDT3,C6orf1	MCF7	ChIA-PET	22265404	CYCSP55	6510	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	35270455	35270931	35270541	Y	TAF11,ANKS1A,ZNF76,DEF6,PPARD	ZNF76	NA	NA	NA	NA	ZNF76	45769	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	35532430	35532714	35532506	Y	NA	NA	NA	NA	NA	NA	RPL10A	98245	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	36409257	36409482	36409373	Y	MAPK14,BRPF3,STK38,SRSF3,CDKN1A,CDKN1A,ETV7,ETV7,PXT1,KCTD20	KCTD20	NA	NA	NA	NA	KCTD20	713	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	37070053	37070857	37070460	Y	CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2	NA	PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	65122	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr6	37190361	37190574	37190538	Y	NA	TBC1D22B,TMEM217	NA	NA	NA	NA	TBC1D22B	32974	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	37470188	37470996	37470682	Y	NA	CCDC167	CCDC167,FTSJD2,MDGA1,RNF8,MIR4462,BTBD9	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CCDC167	4490	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	37673124	37673343	37673226	Y	NA	NA	MDGA1	K562	ChIA-PET	22265404	ZFAND3	111932	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	39122561	39122673	39122617	Y	NA	SAYSD1	GLP1R,DNAH8	IMR90	Hi-C	24141950	SAYSD1	41596	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	41286601	41286824	41286755	Y	NFYA,TFEB,TREML4,TREM1	TREM1	C6orf130	K562	ChIA-PET	22265404	TREM1	34144	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	42420719	42421067	42420926	Y	NA	TRERF1	NA	NA	NA	NA	TRERF1	2930	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	43351423	43351855	43351784	Y	NA	ZNF318,ABCC10	TJAP1,TTBK1,DLK2,POLH,SLC22A7,ABCC10,C6orf108,CUL9,YIPF3,LRRC73,POLR1C,CRIP3,ZNF318,XPO5	IMR90	Hi-C	24141950	ZNF318	16207	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	44205807	44206020	44205896	Y	NA	SLC29A1,HSP90AB1,SLC35B2,NFKBIE,TMEM151B	NA	NA	NA	NA	HSP90AB1	6804	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	53224045	53224723	53224315	Y	NA	ELOVL5	ELOVL5	K562	ChIA-PET	22265404	ELOVL5	12098	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	54604535	54604549	54604543	Y	NA	NA	NA	NA	NA	NA	HMGCLL1	837463	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	56229630	56229801	56229716	Y	NA	NA	DST	IMR90	Hi-C	24141950	BMP5	491268	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	58777244	58778438	58777771	Y	NA	NA	NA	NA	NA	NA	GUSBP4	522675	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	64151294	64151779	64151706	Y	NA	NA	NA	NA	NA	NA	PTP4A1	77887	CAGE	NCI-H1385	hg19	FANTOM5	7.03645486260395
chr6	70941416	70941424	70941420	Y	FAM135A	NA	NA	NA	NA	NA	FAM135A	179220	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	80487784	80488033	80487927	Y	NA	NA	NA	NA	NA	NA	SH3BGRL2	148784	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	81348599	81348680	81348638	Y	NA	NA	BCKDHB	IMR90	Hi-C	24141950	BCKDHB	534235	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	90885505	90885892	90885812	Y	BACH2,BACH2	NA	NA	NA	NA	NA	BACH2	118735	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	99279577	99279776	99279667	Y	POU3F2	NA	NA	NA	NA	NA	FBXL4	114073	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	106440406	106440671	106440473	Y	PRDM1	NA	PRDM1,ATG5	IMR90	Hi-C	24141950	ATG5	330995	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	108455044	108455377	108455332	Y	NA	OSTM1	LACE1,ARMC2,NR2E1	IMR90	Hi-C	24141950	OSTM1	29681	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	109269728	109269873	109269801	Y	NA	RP11-249L21.4	SESN1	IMR90	Hi-C	24141950	RP11-249L21.4	42652	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	114176108	114176553	114176196	Y	MARCKS	NA	NA	NA	NA	NA	MARCKS	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	114662587	114662962	114662866	Y	NA	NA	NA	NA	NA	NA	HDAC2	332115	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	116988703	116988966	116988944	Y	DSE,ZUFSP,KPNA5	ZUFSP,KPNA5	NA	NA	NA	NA	ZUFSP	746	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	119366243	119366474	119366359	Y	NA	NA	NA	NA	NA	NA	FAM184A	102078	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	125420883	125421200	125421024	Y	NA	TPD52L1	NA	NA	NA	NA	TPD52L1	16995	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	126068034	126068254	126068125	Y	HEY2	NCOA7	NA	NA	NA	NA	NCOA7	32053	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	127769705	127769797	127769751	Y	NA	RP3-403A15.1	NA	NA	NA	NA	RP3-403A15.1	14924	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	129822062	129822220	129822139	Y	NA	NA	NA	NA	NA	NA	ARHGAP18	207150	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	133059787	133059954	133059917	Y	NA	NA	NA	NA	NA	NA	RPS12	73626	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	136646315	136646580	136646378	Y	NA	BCLAF1	NA	NA	NA	NA	BCLAF1	37326	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	138427134	138427492	138427302	Y	PERP	PERP	NA	NA	NA	NA	PERP	486	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	140984884	140985153	140985121	Y	NA	NA	LOC100132735	IMR90	Hi-C	24141950	CITED2	1291127	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	147477372	147477535	147477473	Y	NA	STXBP5,STXBP5-AS1	NA	NA	NA	NA	STXBP5	46026	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	148822303	148822649	148822378	Y	NA	NA	NA	NA	NA	NA	SASH1	230863	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	154858221	154858762	154858474	Y	CNKSR3	CNKSR3	IPCEF1,OPRM1,CNKSR3	IMR90	Hi-C	24141950	CNKSR3	28428	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	154914262	154914493	154914392	Y	CNKSR3	NA	NA	NA	NA	NA	CNKSR3	84469	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	157007979	157008724	157008580	Y	ARID1B	NA	MIR4466,ARID1B,NOX3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ARID1B	88339	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	157639062	157639495	157639253	Y	C6orf35	NA	NA	NA	NA	NA	TMEM242	103138	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	161794970	161795177	161795007	Y	NA	NA	NA	NA	NA	NA	AGPAT4	101877	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	166422302	166422862	166422743	Y	NA	PDE10A,LINC00473	NA	NA	NA	NA	LINC00473	22766	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	168789584	168789819	168789635	Y	NA	NA	CCR6	IMR90	Hi-C	24141950	DACT2	71150	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	170358465	170358648	170358556	Y	FAM120B	NA	LOC154449,DLL1	IMR90	Hi-C	24141950	TCTE3	208810	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	170468202	170468424	170468316	Y	NA	NA	NA	NA	NA	NA	DLL1	129137	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr6	170589556	170589600	170589578	Y	WDR27,TCTE3,TBP	DLL1,FAM120B	NA	NA	NA	NA	DLL1	7961	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr6	170600439	170600921	170600644	Y	NA	DLL1,FAM120B	NA	NA	NA	NA	FAM120B	2648	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	1546091	1546367	1546260	Y	NA	MICALL2,INTS1,MAFK	NA	NA	NA	NA	INTS1	2602	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	1546424	1546775	1546565	Y	NA	MICALL2,INTS1,MAFK	NA	NA	NA	NA	INTS1	2935	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	1706379	1706695	1706444	Y	NA	NA	MAD1L1,KIAA1908,PSMG3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PSMG3	97738	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	1945683	1945719	1945693	Y	NA	NA	NA	NA	NA	NA	MAD1L1	325159	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	1968189	1968469	1968397	Y	NA	NA	NA	NA	NA	NA	MAD1L1	302409	CAGE	NCI-H1385	hg19	FANTOM5	28.1458194504158
chr7	2006506	2006818	2006734	Y	NA	NA	NA	NA	NA	NA	MAD1L1	264060	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	2550421	2551074	2550672	Y	LFNG,LFNG,BRAT1	LFNG,BRAT1,IQCE	NA	NA	NA	NA	LFNG	258	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	4681329	4681565	4681443	Y	MMD2	NA	SDK1,FOXK1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXK1	0	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	5609541	5610012	5609880	Y	SLC29A4,TNRC18,FBXL18,FSCN1	ACTB,FSCN1	RNF216,FSCN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACTB	8126	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr7	13085757	13085829	13085793	Y	NA	NA	ARL4A	IMR90	Hi-C	24141950	ARL4A	361276	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	19157963	19158297	19158271	Y	NA	TWIST1	NA	NA	NA	NA	TWIST1	2668	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	20163699	20164108	20163996	Y	NA	AC005062.2	NA	NA	NA	NA	AC005062.2	13968	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	20837430	20837819	20837731	Y	SP8	SP8	SP8	K562	ChIA-PET	22265404	SP8	12925	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	22011633	22011901	22011770	Y	NA	CDCA7L	NA	NA	NA	NA	CDCA7L	27931	CAGE	NCI-H1385	hg19	FANTOM5	6.25462654453684
chr7	22485088	22485297	22485116	Y	RAPGEF5	NA	NA	NA	NA	NA	EEF1A1P6	64321	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	24875802	24875986	24875894	Y	NA	NA	NA	NA	NA	NA	MPP6	264915	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	25872655	25872829	25872766	Y	NA	NA	NA	NA	NA	NA	NFE2L3	317031	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	25896515	25897081	25896801	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	292779	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	25990725	25991211	25991018	Y	NA	NA	NA	NA	NA	NA	NFE2L3	198649	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr7	25992296	25992472	25992423	Y	NA	NA	NA	NA	NA	NA	NFE2L3	197388	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	28191527	28192056	28191751	Y	NA	JAZF1-AS1,JAZF1	NA	NA	NA	NA	JAZF1-AS1	25885	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	28194446	28194874	28194789	Y	NA	JAZF1-AS1,JAZF1	NA	NA	NA	NA	JAZF1-AS1	23067	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	35075861	35076697	35076367	Y	NA	NA	NA	NA	NA	NA	HERPUD2	656484	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	36785983	36786266	36786088	Y	AOAH	NA	AOAH	IMR90	Hi-C	24141950	KIAA0895	358249	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	41025919	41026252	41026112	Y	NA	NA	C7orf10,LOC285954,INHBA	IMR90	Hi-C	24141950	INHBA	714454	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	42927750	42928726	42928340	Y	NA	C7orf25,MRPL32,PSMA2	NA	NA	NA	NA	C7orf25	21178	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr7	57471842	57471971	57471867	Y	NA	NA	NA	NA	NA	NA	CHCHD2	1299573	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	65878387	65878723	65878560	Y	RABGEF1,KCTD7	NA	ASL,CRCP,TPST1,LINC00174	IMR90	Hi-C	24141950	GS1-124K5.3	77830	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	75795833	75796053	75795969	Y	RHBDD2,POR	SRRM3	SRRM3,HSPB1,MDH2,STYXL1	IMR90	Hi-C	24141950	SRRM3	33163	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr7	75993825	75994303	75994024	Y	NA	YWHAG,ZP3	YWHAG	MCF7	ChIA-PET	22265404	YWHAG	7477	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr7	76009173	76009680	76009431	Y	POR	YWHAG,ZP3	NA	NA	NA	NA	ZP3	15155	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	77428722	77429286	77429067	Y	PION,PTPN12,RSBN1L,PHTF2,PHTF2	TMEM60,PHTF2	NA	NA	NA	NA	PHTF2	2600	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr7	81233474	81233832	81233648	Y	NA	NA	HGF,CACNA2D1	IMR90	Hi-C	24141950	HGF	163922	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	81234008	81234151	81234026	Y	NA	NA	HGF,CACNA2D1	IMR90	Hi-C	24141950	HGF	163603	CAGE	NCI-H1385	hg19	FANTOM5	18.7638796336105
chr7	81247788	81247966	81247912	Y	NA	NA	HGF	IMR90	Hi-C	24141950	HGF	149788	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	81582871	81583219	81583134	Y	NA	NA	NA	NA	NA	NA	HGF	185117	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	82004642	82004673	82004658	Y	NA	NA	NA	NA	NA	NA	CACNA2D1	66441	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	85403399	85403494	85403443	Y	NA	NA	NA	NA	NA	NA	SEMA3D	589228	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	85450448	85450904	85450654	Y	NA	NA	NA	NA	NA	NA	SEMA3D	636277	CAGE	NCI-H1385	hg19	FANTOM5	18.7638796336105
chr7	90711391	90711663	90711528	Y	NA	NA	NA	NA	NA	NA	FZD1	180120	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	93672671	93673149	93672763	Y	NA	BET1	GNG11,TFPI2,BET1	IMR90	Hi-C	24141950	BET1	40977	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	95645399	95645785	95645516	Y	NA	NA	NA	NA	NA	NA	DYNC1I1	245533	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	98557558	98557720	98557639	Y	KPNA7	NA	NA	NA	NA	NA	MIR3609	80285	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	99291105	99291222	99291169	Y	PTCD1,CYP3A43,CYP3A4,AZGP1,CYP3A5	NA	NA	NA	NA	NA	FAM200A	136946	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	99551289	99551506	99551376	Y	ZCWPW1,PILRA,MEPCE,C7orf59,ZNF655,ZNF655	TRIM4	NA	NA	NA	NA	TRIM4	36066	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	99678619	99678725	99678657	Y	NA	ZSCAN21,ZNF3,COPS6,AP4M1,MCM7,CNPY4,TAF6	NA	NA	NA	NA	ZNF3	448	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	100743461	100743946	100743576	Y	GNB2,TRIM56	NA	SERPINE1	IMR90	Hi-C	24141950	AP1S1	51732	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	101929978	101930313	101930074	Y	CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2	NA	NA	NA	NA	NA	PRKRIP1	72006	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr7	104684659	104684988	104684665	Y	NA	LINC01004	NA	NA	NA	NA	LINC01004	33168	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	106089773	106090176	106089868	Y	NAMPT,PIK3CG	NA	NAMPT	IMR90	Hi-C	24141950	NAMPT	165001	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	108056534	108056914	108056866	Y	PNPLA8,DNAJB9	NRCAM	NA	NA	NA	NA	NRCAM	38247	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	111721905	111722337	111722086	Y	ZNF277,IFRD1,DOCK4	NA	NA	NA	NA	NA	DOCK4	122129	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	111819433	111819596	111819575	Y	NA	DOCK4,ZNF277	NA	NA	NA	NA	DOCK4	24870	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	114056337	114056620	114056363	Y	NA	NA	NA	NA	NA	NA	FOXP2	331955	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	127807416	127807928	127807646	Y	LRRC4	NA	SND1	IMR90	Hi-C	24141950	LRRC4	137256	CAGE	NCI-H1385	hg19	FANTOM5	3.90914159033553
chr7	128170830	128171695	128171212	Y	NA	NA	IMPDH1,HILPDA,METTL2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	METTL2B	56047	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	129419876	129420343	129420085	Y	NA	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	NRF1	170321	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr7	129421490	129421976	129421792	Y	FAM40B	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	UBE2H	168813	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	129464915	129465297	129464948	Y	NA	NA	NA	NA	NA	NA	UBE2H	125492	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr7	129465628	129465864	129465722	Y	NA	NA	NA	NA	NA	NA	UBE2H	124925	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr7	131580267	131580830	131580536	Y	NA	NA	PLXNA4	IMR90	Hi-C	24141950	PODXL	339291	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	132095203	132095420	132095353	Y	PLXNA4,PLXNA4	NA	NA	NA	NA	NA	CHCHD3	669428	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	134117156	134117311	134117298	Y	NA	AKR1B1	NA	NA	NA	NA	AKR1B1	24725	CAGE	NCI-H1385	hg19	FANTOM5	7.03645486260395
chr7	138917056	138917428	138917261	Y	ZC3HAV1,UBN2	UBN2	NA	NA	NA	NA	UBN2	3954	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr7	140774728	140775101	140774915	Y	NA	NA	NA	NA	NA	NA	MRPS33	61700	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	148638273	148638633	148638462	Y	NA	NA	EZH2,ZNF786,ZNF398,ZNF425,CUL1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EZH2	58860	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	148684338	148684706	148684475	Y	NA	PDIA4	NA	NA	NA	NA	PDIA4	39027	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr7	148788414	148788490	148788418	Y	CUL1,ZNF786,ZNF425,ZNF398	ZNF398	NA	NA	NA	NA	ZNF398	33018	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	149468740	149469267	149468803	Y	NA	ZNF467	NA	NA	NA	NA	ZNF467	172	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr7	152160715	152161193	152160959	Y	NA	NA	NA	NA	NA	NA	XRCC2	210057	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr7	152161348	152162014	152161594	Y	NA	NA	NA	NA	NA	NA	XRCC2	209236	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr8	638062	638589	638348	Y	ZNF596,ZNF596,ERICH1	ERICH1	NA	NA	NA	NA	ERICH1	47517	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	10875664	10875852	10875757	Y	NA	NA	NA	NA	NA	NA	PINX1	180270	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	11560575	11560973	11560829	Y	GATA4	NA	NA	NA	NA	NA	NEIL2	64175	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	13988363	13988798	13988479	Y	NA	NA	NA	NA	NA	NA	TUSC3	1283926	CAGE	NCI-H1385	hg19	FANTOM5	50.8188406743619
chr8	16629867	16630175	16630011	Y	ZDHHC2	NA	TUSC3,MSR1,SGCZ,ZDHHC2	IMR90	Hi-C	24141950	ZDHHC2	381363	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	17463292	17463534	17463469	Y	MTMR7,MTUS1	PDGFRL	NA	NA	NA	NA	PDGFRL	31350	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	19467797	19468008	19467904	Y	NA	NA	NA	NA	NA	NA	INTS10	204643	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	21775759	21776194	21775973	Y	PHYHIP,DOK2,NPM2	XPO7	NA	NA	NA	NA	XPO7	579	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	21867707	21867918	21867811	Y	PHYHIP,LGI3,EPB49,EPB49,NPM2	NA	NA	NA	NA	NA	FAM160B2	76752	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	22441359	22441704	22441532	Y	NA	SORBS3,PDLIM2,C8orf58	NA	NA	NA	NA	PDLIM2	7567	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	24858208	24858485	24858356	Y	NA	NEFL	NA	NA	NA	NA	NEFL	45584	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	26232086	26232281	26232177	Y	NA	BNIP3L,SDAD1P1	NA	NA	NA	NA	BNIP3L	6133	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	27114452	27114997	27114718	Y	NA	STMN4	NA	NA	NA	NA	STMN4	515	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	27474556	27474730	27474657	Y	NA	CLU,SCARA3	SCARA3,TRIM35,CLU,CCDC25,ESCO2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CLU	4008	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	29595040	29595214	29595121	Y	KIF13B,DUSP4,DUSP4,TMEM66,LEPROTL1	NA	NA	NA	NA	NA	TMEM66	343509	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	30769723	30770025	30769859	Y	NA	NA	TEX15,WRN,PPP2CB,PURG	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPP2CB	99893	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr8	37002327	37002551	37002443	Y	NA	NA	KCNU1,PROSC,ZNF703,ERLIN2,LOC728024,GPR124	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF703	548718	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	38160807	38161004	38160956	Y	NA	PPAPDC1B	NA	NA	NA	NA	PPAPDC1B	36046	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	38242599	38242872	38242674	Y	TACC1,WHSC1L1,LETM2,LETM2	WHSC1L1,LETM2	NA	NA	NA	NA	LETM2	874	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	39964053	39964403	39964231	Y	NA	C8orf4	C8orf4	IMR90	Hi-C	24141950	C8orf4	44586	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	41997279	41998522	41997937	Y	NA	AP3M2	KAT6A,ANK1,POLB,AP3M2,VDAC3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP3M2	9942	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	42383718	42383741	42383730	Y	NA	SLC20A2	NA	NA	NA	NA	SLC20A2	11328	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	49426952	49427328	49427172	Y	SNAI2	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	131802	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	49835974	49836286	49836197	Y	SNAI2	SNAI2	NA	NA	NA	NA	SNAI2	3675	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	53243512	53243700	53243588	Y	ST18	NA	NA	NA	NA	NA	RB1CC1	412703	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr8	54932125	54932445	54932251	Y	NA	TCEA1	NA	NA	NA	NA	TCEA1	644	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	59980234	59980420	59980383	Y	NA	RP11-25K19.1,TOX	NA	NA	NA	NA	RP11-25K19.1	49179	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	61592861	61593584	61592948	Y	NA	CHD7	NA	NA	NA	NA	CHD7	3524	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	61705362	61705819	61705615	Y	NA	NA	NA	NA	NA	NA	CHD7	116025	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	62634431	62634735	62634612	Y	ASPH	ASPH	NA	NA	NA	NA	ASPH	9276	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	67033765	67034253	67033944	Y	NA	NA	NA	NA	NA	NA	PDE7A	281208	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	73333960	73334345	73334224	Y	NA	NA	NA	NA	NA	NA	KCNB2	113281	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	73605435	73605486	73605461	Y	KCNB2,TERF1	NA	NA	NA	NA	NA	KCNB2	157809	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	73733862	73734193	73733971	Y	KCNB2	NA	NA	NA	NA	NA	TERF1	184906	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	78067256	78067767	78067611	Y	NA	NA	NA	NA	NA	NA	PEX2	155976	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	80680806	80681178	80681064	Y	HEY1	HEY1	NA	NA	NA	NA	HEY1	2708	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	81639602	81640013	81639931	Y	ZNF704	NA	NA	NA	NA	NA	ZBTB10	243748	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	95003706	95004122	95004001	Y	NA	NA	LINC00535,RBM12B,RAD54B,CDH17,GEM	IMR90	Hi-C	24141950	PDP1	135671	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	97779129	97779296	97779215	Y	PGCP	NA	NA	NA	NA	NA	SDC2	275550	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	98877971	98878157	98878074	Y	NA	MATN2	NA	NA	NA	NA	MATN2	911	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr8	99952283	99952358	99952318	Y	OSR2	STK3,OSR2	NA	NA	NA	NA	STK3	697	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	99953302	99954000	99953407	Y	STK3,OSR2	STK3,OSR2	NA	NA	NA	NA	STK3	247	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	101428409	101428827	101428524	Y	RNF19A,RNF19A	NA	SPAG1,RNF19A,ANKRD46,MIR4471	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNF19A	81963	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	101920723	101921107	101920870	Y	NA	YWHAZ	NA	NA	NA	NA	YWHAZ	42509	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	102038562	102039020	102038731	Y	PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706	NA	ZNF706,YWHAZ,SNX31,FLJ42969	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	YWHAZ	74946	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	102161878	102162231	102162054	Y	NA	NA	FLJ42969,YWHAZ,ZNF706	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF706	54190	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	102373140	102373427	102373201	Y	NA	NACAP1	GRHL2,NACAP1,NCALD	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NACAP1	1118	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	103803215	103803631	103803453	Y	AZIN1,ATP6V1C1,KLF10,KLF10	NA	KLF10,UBR5,ODF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1507C5.2	70897	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	104406173	104406574	104406390	Y	NA	CTHRC1,DCAF13,SLC25A32	NA	NA	NA	NA	DCAF13	18368	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	105087342	105087776	105087510	Y	NA	NA	NA	NA	NA	NA	LRP12	511476	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	111381887	111381916	111381903	Y	NA	NA	NA	NA	NA	NA	SYBU	679867	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	114058689	114058941	114058782	Y	NA	NA	NA	NA	NA	NA	CSMD3	388387	CAGE	NCI-H1385	hg19	FANTOM5	14.854738043275
chr8	114257291	114257677	114257549	Y	CSMD3	NA	NA	NA	NA	NA	CSMD3	189651	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	114447535	114447912	114447629	Y	CSMD3	CSMD3	NA	NA	NA	NA	CSMD3	207	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	121822442	121823157	121823030	Y	NA	NA	NA	NA	NA	NA	MRPL13	366800	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	124363606	124363931	124363783	Y	NA	NA	NA	NA	NA	NA	ATAD2	62659	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	124549741	124550229	124550044	Y	FBXO32,FBXO32	FBXO32	NA	NA	NA	NA	FBXO32	1217	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr8	125275002	125275221	125275161	Y	RNF139	NA	FER1L6,FER1L6-AS1,TMEM65,FAM91A1	IMR90	Hi-C	24141950	TMEM65	107712	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	125984707	125984742	125984718	Y	ZNF572	ZNF572,SQLE	NA	NA	NA	NA	ZNF572	1167	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	126195292	126195668	126195512	Y	TRIB1,KIAA0196,NSMCE2	NA	TRIB1	IMR90	Hi-C	24141950	KIAA0196	93210	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	126446642	126447323	126446973	Y	KIAA0196,NSMCE2,TRIB1	TRIB1	NA	NA	NA	NA	TRIB1	6079	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	129569050	129569202	129569118	Y	NA	NA	MYC,PVT1	IMR90	Hi-C	24141950	RNU4-25P	548193	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	130996080	130996422	130996182	Y	NA	FAM49B	NA	NA	NA	NA	FAM49B	30953	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	130996669	130996803	130996748	Y	NA	FAM49B	NA	NA	NA	NA	FAM49B	30572	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	131245360	131245556	131245456	Y	NA	NA	NA	NA	NA	NA	ASAP1	208350	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	132928633	132929053	132928845	Y	NA	EFR3A	NA	NA	NA	NA	EFR3A	14298	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr8	134699077	134699376	134699146	Y	NA	NA	ST3GAL1	IMR90	Hi-C	24141950	NDRG1	386812	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	135843585	135843751	135843688	Y	ZFAT	NA	ZFAT,MIR30D,MIR30B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZFAT	120293	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr8	139293707	139293714	139293711	Y	NA	NA	NA	NA	NA	NA	COL22A1	630535	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	141108529	141108796	141108710	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	357882	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr8	141108929	141109987	141109387	Y	KCNK9,TRAPPC9	NA	NA	NA	NA	NA	TRAPPC9	356691	CAGE	NCI-H1385	hg19	FANTOM5	5.47279822646974
chr8	141110302	141110773	141110688	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	355905	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr8	141849368	141849592	141849371	Y	TRAPPC9	NA	NA	NA	NA	NA	PTK2	160723	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	142424633	142425265	142424919	Y	NA	PTP4A3	NA	NA	NA	NA	PTP4A3	24540	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	142426003	142426250	142426062	Y	PTP4A3	PTP4A3	NA	NA	NA	NA	PTP4A3	25910	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	143533998	143534621	143534303	Y	LYNX1,LYNX1,TSNARE1,BAI1	NA	BAI1,TSNARE1	MCF7	ChIA-PET	22265404	TSNARE1	51397	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	143696778	143697162	143696893	Y	NA	ARC	NA	NA	NA	NA	ARC	1945	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr8	144360422	144361034	144360946	Y	ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT	ZFP41,GLI4,RP13-582O9.5,ZNF696	NA	NA	NA	NA	RP13-582O9.5	826	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr8	145025737	145026802	145026365	Y	ZC3H3,GSDMD,NAPRT1,EEF1D,SPATC1,PLEC,PARP10	GRINA	NA	NA	NA	NA	GRINA	35424	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr8	145558616	145559185	145558966	Y	ZNF517,ZNF34,LRRC24,KIFC2,CYHR1,SCRT1	BOP1,HSF1,DGAT1,FBXL6,ADCK5	NA	NA	NA	NA	DGAT1	10043	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr8	145909879	145909957	145909931	Y	SCRT1,KIFC2,LRRC24,ARHGAP39,ZNF517,ZNF34	ARHGAP39	ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	685	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr8	145911932	145912089	145912059	Y	SCRT1,KIFC2,LRRC24,ZNF34	ARHGAP39	ARHGAP39,ZNF251,ZNF34	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	2738	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	2623377	2623723	2623671	Y	NA	VLDLR	NA	NA	NA	NA	VLDLR	3543	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	4334414	4334840	4334611	Y	NA	GLIS3	GLIS3	IMR90	Hi-C	24141950	GLIS3	11552	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	5843832	5844207	5843936	Y	NA	ERMP1	ERMP1	IMR90	Hi-C	24141950	ERMP1	12715	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	6680895	6681975	6681336	Y	UHRF2,KDM4C	RP11-106A1.2,KDM4C	KDM4C,UHRF2,GLDC	K562,MCF7	ChIA-PET	22265404	KDM4C	36888	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	10530768	10530969	10530965	Y	NA	NA	NA	NA	NA	NA	PTPRD	79754	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	13034069	13034552	13034397	Y	NA	NA	NFIB	IMR90	Hi-C	24141950	RP11-3L8.3	221725	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	14322295	14322910	14322674	Y	ZDHHC21,NFIB	NA	NA	NA	NA	NA	ZDHHC21	368559	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	18718417	18718817	18718751	Y	NA	NA	NA	NA	NA	NA	RP11-296P7.4	306073	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	33229414	33229715	33229547	Y	NA	BAG1,CHMP5	NFX1	MCF7	ChIA-PET	22265404	BAG1	33046	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	35603992	35604628	35604112	Y	TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2	TESK1	NA	NA	NA	NA	TESK1	625	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	36765862	36766252	36766147	Y	RNF38,RNF38	NA	MELK	IMR90	Hi-C	24141950	MELK	195003	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	37036641	37037011	37036829	Y	ZCCHC7,ZBTB5,PAX5	PAX5	NA	NA	NA	NA	PAX5	4538	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	37963992	37964293	37964120	Y	NA	NA	NA	NA	NA	NA	SHB	102917	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	68377347	68377469	68377407	Y	NA	NA	NA	NA	NA	NA	FAM122A	3015495	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr9	68417391	68418146	68417579	Y	NA	NA	NA	NA	NA	NA	FAM122A	2974818	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	68455261	68455556	68455421	Y	NA	NA	NA	NA	NA	NA	FAM122A	2937408	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr9	73025378	73025559	73025525	Y	NA	KLF9	NA	NA	NA	NA	KLF9	1981	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	73033763	73035382	73035076	Y	SMC5,KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	6223	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	73035561	73035945	73035863	Y	KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	8021	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	90133886	90134005	90133888	Y	NA	NA	NA	NA	NA	NA	CDK20	453663	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	91150927	91151269	91151097	Y	NA	NA	NA	NA	NA	NA	SPIN1	149593	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	91762072	91762095	91762084	Y	NA	SHC3	NA	NA	NA	NA	SHC3	29587	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	91795136	91795669	91795494	Y	C9orf47,SHC3	SHC3	NA	NA	NA	NA	SHC3	3454	CAGE	NCI-H1385	hg19	FANTOM5	10.1637681348724
chr9	92218967	92219282	92219262	Y	NA	GADD45G	NA	NA	NA	NA	GADD45G	1039	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	92255438	92255678	92255612	Y	SECISBP2,SEMA4D	GADD45G	NA	NA	NA	NA	GADD45G	37510	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	92762358	92762553	92762476	Y	NA	NA	NA	NA	NA	NA	GADD45G	544430	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	100685565	100685605	100685585	Y	NA	C9orf156	NA	NA	NA	NA	C9orf156	2713	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	102277502	102277650	102277581	Y	TGFBR1,NR4A3	NA	SEC61B,ALG2	IMR90	Hi-C	24141950	SEC61B	295156	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	109626456	109627144	109627032	Y	NA	ZNF462	NA	NA	NA	NA	ZNF462	3078	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	113020211	113020679	113020386	Y	AKAP2	TXN	NA	NA	NA	NA	TXN	3291	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	113646742	113646840	113646791	Y	NA	NA	NA	NA	NA	NA	KIAA0368	598185	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	117657108	117657611	117657338	Y	DFNB31,ATP6V1G1,TNFSF15,TNFSF15,TNFSF8	NA	NA	NA	NA	NA	TNFSF15	90702	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	117671276	117671580	117671329	Y	DFNB31,ATP6V1G1,TNFSF15,TNFSF15,TNFSF8	NA	NA	NA	NA	NA	TNFSF15	104870	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	118024698	118025071	118024956	Y	NA	NA	NA	NA	NA	NA	TNC	146162	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	119404408	119404429	119404420	Y	NA	TRIM32	NA	NA	NA	NA	TRIM32	43152	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	123446824	123446976	123446902	Y	TRAF1,TRAF1	MEGF9	NA	NA	NA	NA	MEGF9	27772	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	123640419	123640826	123640772	Y	NA	PSMD5,PHF19	NA	NA	NA	NA	PHF19	2813	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	126291594	126291648	126291621	Y	NA	NA	NA	NA	NA	NA	CRB2	175145	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	130718218	130718307	130718248	Y	NA	ST6GALNAC4,DPM2,FAM102A	NA	NA	NA	NA	DPM2	19455	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	132040752	132040968	132040856	Y	NA	C9orf106	C9orf106,IER5L,LOC100506190,PPP2R4,CRAT,C9orf50,METTL11A	IMR90,MCF7,HELA,K562	Hi-C,ChIA-PET,5C	24141950,22265404,22955621	C9orf106	40327	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	132171147	132171349	132171255	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	72381	CAGE	NCI-H1385	hg19	FANTOM5	3.12731327226842
chr9	132175926	132176326	132176076	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	67404	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	132257886	132258547	132258348	Y	NA	LINC00963	NA	NA	NA	NA	LINC00963	14156	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	134248752	134249121	134248943	Y	AIF1L,POMT1,PRRC2B	PRRC2B	PRRC2B,NUP214,FAM78A	IMR90	Hi-C	24141950	PRRC2B	18359	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chr9	135089544	135089849	135089761	Y	NTNG2	NA	NA	NA	NA	NA	MED27	136249	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	139737773	139737949	139737875	Y	NA	PHPT1,EDF1,TRAF2	NA	NA	NA	NA	PHPT1	3227	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	139826661	139826850	139826762	Y	NOTCH1,NDOR1,LCNL1,TRAF2	FBXW5	NA	NA	NA	NA	FBXW5	10298	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	140023869	140024391	140024239	Y	NA	MAN1B1,DPP7,MIR3621	GRIN1	K562	ChIA-PET	22265404	DPP7	16240	CAGE	NCI-H1385	hg19	FANTOM5	11.7274247710066
chr9	140117588	140118357	140118103	Y	C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1	ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	TUBB4B	15308	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chr9	140134697	140134985	140134927	Y	C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3	TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	TUBB4B	1032	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	140189199	140189592	140189229	Y	NA	NRARP	NA	NA	NA	NA	NRARP	5111	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chr9	140205114	140205300	140205216	Y	PNPLA7,NOXA1,NRARP	NRARP	NA	NA	NA	NA	NRARP	10411	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	3732842	3733263	3733002	Y	PRKX	NA	NA	NA	NA	NA	PRKX	103193	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	9433838	9434425	9434365	Y	TBL1X	TBL1X	NA	NA	NA	NA	TBL1X	4503	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	10161663	10162021	10162010	Y	NA	CLCN4	NA	NA	NA	NA	CLCN4	38639	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	12859907	12859927	12859917	Y	ATXN3L	NA	NA	NA	NA	NA	PRPS2	52433	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	18693104	18693424	18693141	Y	PHKA2,CDKL5	NA	NA	NA	NA	NA	CDKL5	251401	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	36981340	36981727	36981708	Y	PRRG1,PRRG1	NA	NA	NA	NA	NA	PRRG1	224801	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	39873339	39874259	39873676	Y	NA	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	160323	CAGE	NCI-H1385	hg19	FANTOM5	2.34548495420132
chrX	39963356	39963613	39963579	Y	NA	NA	NA	NA	NA	NA	BCOR	70969	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	39963931	39964200	39963990	Y	BCOR	NA	NA	NA	NA	NA	BCOR	70382	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	39965558	39965902	39965820	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	68680	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	39966584	39967157	39966963	Y	BCOR	NA	NA	NA	NA	NA	BCOR	67425	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	40030956	40031200	40030978	Y	BCOR,CXorf38,ATP6AP2	BCOR	NA	NA	NA	NA	BCOR	3382	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	40032962	40033837	40033453	Y	BCOR,CXorf38,BCOR	BCOR	NA	NA	NA	NA	BCOR	745	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	40034694	40035505	40035056	Y	BCOR,CXorf38,ATP6AP2,BCOR	BCOR	NA	NA	NA	NA	BCOR	112	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	46989082	46989431	46989227	Y	NA	RBM10,NDUFB11	NA	NA	NA	NA	RBM10	12837	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	47221089	47221361	47221213	Y	NA	NA	USP11,ZNF157,UBA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF41	118984	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	47415526	47415793	47415667	Y	NA	ARAF	NA	NA	NA	NA	ARAF	2723	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	70401853	70402134	70401993	Y	IL2RG,MED12,TAF1,OGT,CXCR3,NONO	NA	NA	NA	NA	NA	MED12	65447	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	73228588	73229157	73228689	Y	CHIC1	NA	NA	NA	NA	NA	JPX	66429	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	73510244	73510542	73510484	Y	RLIM	FTX	NA	NA	NA	NA	FTX	867	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	101914784	101914936	101914847	Y	BHLHB9,GPRASP1,GPRASP1	GPRASP1	NA	NA	NA	NA	GPRASP1	10490	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chrX	123351438	123351580	123351505	Y	SH2D1A	NA	NA	NA	NA	NA	STAG2	259376	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	140218304	140218459	140218382	Y	NA	NA	NA	NA	NA	NA	LDOC1	50851	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	150152595	150153067	150152778	Y	NA	HMGB3,RPL19P21	NA	NA	NA	NA	HMGB3	5613	CAGE	NCI-H1385	hg19	FANTOM5	7.81828318067106
chrX	152075667	152076216	152075921	Y	GABRQ	NA	NA	NA	NA	NA	NSDHL	78156	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	153166203	153166850	153166548	Y	ABCD1,PLXNB3,MECP2,ATP6AP1,RENBP	L1CAM,ARHGAP4,NAA10,RENBP	NA	NA	NA	NA	L1CAM	5827	CAGE	NCI-H1385	hg19	FANTOM5	1.56365663613421
chrX	153239828	153239923	153239886	Y	ABCD1,ARHGAP4,RENBP,MECP2,EMD,DNASE1L1,TMEM187	ARHGAP4,NAA10,RENBP,HCFC1,IRAK1	NA	NA	NA	NA	HCFC1	4570	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	153308447	153308946	153308655	Y	ABCD1,ARHGAP4,RENBP,TEX28,TEX28,TAZ,MECP2,IKBKG,IKBKG,IKBKG,EMD,DNASE1L1,TMEM187,IRAK1	IRAK1	IRAK1,MIR718	MCF7	ChIA-PET	22265404	IRAK1	25016	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	153596671	153598676	153598064	Y	NA	FLNA,EMD,RPL10,TAZ	NA	NA	NA	NA	FLNA	2330	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106
chrX	153771070	153771275	153771201	Y	IRAK1,MECP2,TEX28,TEX28,EMD,DNASE1L1,TAZ,ATP6AP1,F8A2,F8A1,LOC100132963,MPP1,GAB3,IKBKG,IKBKG,IKBKG	FAM3A,IKBKG,G6PD	NA	NA	NA	NA	G6PD	2512	CAGE	NCI-H1385	hg19	FANTOM5	0.781828318067106