chr1	956563	956812	956665	Y	UBE2J2,PUSL1,GLTPD1,DVL1,CPSF3L,C1orf159,AURKAIP1,AURKAIP1,AURKAIP1,ATAD3A,ATAD3A,NOC2L,PLEKHN1,ISG15,AGRN	HES4,ISG15,AGRN,RP11-465B22.3	NA	NA	NA	NA	AGRN	3060	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	1814762	1815124	1815035	Y	SKI,C1orf86,MIB2	GNB1,TMEM52	NA	NA	NA	NA	GNB1	5371	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	1840449	1840835	1840668	Y	SKI,ATAD3B,C1orf70,MIB2,MIB2,PRKCZ,GABRD	GNB1,TMEM52	NA	NA	NA	NA	TMEM52	7877	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	2111429	2112079	2111937	Y	NA	C1orf86	NA	NA	NA	NA	C1orf86	30080	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	2574343	2574764	2574705	Y	MORN1,PANK4,ACTRT2,MMEL1	NA	NA	NA	NA	NA	FAM213B	58413	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	3420761	3421065	3420920	Y	NA	NA	NA	NA	NA	NA	MEGF6	104994	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	3817648	3818071	3817969	Y	LRRC47	CEP104,DFFB,C1orf174	NA	NA	NA	NA	C1orf174	2791	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	7531062	7531540	7531160	Y	PARK7	NA	NA	NA	NA	NA	VAMP3	297789	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	8107848	8108157	8108001	Y	NA	ERRFI1	ERRFI1,RERE,SLC45A1	IMR90	Hi-C	24141950	ERRFI1	23480	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	8198088	8198334	8198235	Y	NA	NA	ERRFI1,SLC45A1,RERE,PARK7	IMR90	Hi-C	24141950	RNU1-7P	66323	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	8272041	8272390	8272277	Y	NA	RNU1-7P	ERRFI1,PARK7,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	7384	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	8810273	8810466	8810370	Y	NA	NA	NA	NA	NA	NA	RERE	65236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	8858188	8858497	8858477	Y	NA	RERE	NA	NA	NA	NA	RERE	17205	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	8964053	8964236	8964145	Y	ENO1	ENO1	ENO1-AS1,ENO1	K562,MCF7	ChIA-PET	22265404	ENO1	26745	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	9488839	9489227	9489154	Y	NA	NA	SPSB1,SLC25A33,H6PD,MIR34A,GPR157	IMR90	Hi-C	24141950	SLC25A33	108314	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	10853772	10853865	10853819	Y	NA	CASZ1	NA	NA	NA	NA	CASZ1	842	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	10927237	10927380	10927309	Y	CASZ1	NA	PEX14,CASZ1,APITD1-CORT,C1orf127	IMR90	Hi-C	24141950	CASZ1	72530	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	11559549	11559947	11559917	Y	NA	PTCHD2	NA	NA	NA	NA	PTCHD2	22326	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	12050736	12051137	12050880	Y	NPPA,NPPB,MFN2	MFN2,MIIP	NA	NA	NA	NA	MFN2	12498	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	12406013	12406127	12406056	Y	NA	NA	NA	NA	NA	NA	VPS13D	117889	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	14467397	14467540	14467499	Y	NA	NA	NA	NA	NA	NA	PRDM2	442704	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	14992426	14992802	14992486	Y	NA	NA	NA	NA	NA	NA	KAZN	69226	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	15415174	15415506	15415314	Y	NA	NA	NA	NA	NA	NA	TMEM51	61522	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	15762061	15762268	15762214	Y	NA	EFHD2	NA	NA	NA	NA	EFHD2	27670	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	16125579	16125747	16125670	Y	FBLIM1,FBLIM1,FBLIM1,EPHA2	FBLIM1,SPEN,RP11-169K16.9	NA	NA	NA	NA	FBLIM1	44477	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	16175691	16176294	16176100	Y	NA	SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	3049	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	16696032	16696399	16696223	Y	NA	FBXO42	NA	NA	NA	NA	FBXO42	19083	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	16825333	16826291	16825792	Y	NA	NA	SPATA21,NECAP2,CROCCP3,NBPF1,CROCC	IMR90	Hi-C	24141950	NECAP2	60166	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	17231253	17231704	17231392	Y	PADI4,PADI2	RP11-108M9.4	CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-108M9.4	17109	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	17240188	17240783	17240515	Y	NA	RP11-108M9.4	CROCC	K562	ChIA-PET	22265404	RP11-108M9.4	26044	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	17534687	17534794	17534729	Y	NA	RP11-380J14.1	NA	NA	NA	NA	RP11-380J14.1	20409	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	17896198	17896624	17896362	Y	NA	ARHGEF10L	NA	NA	NA	NA	ARHGEF10L	31868	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	19253034	19253391	19253292	Y	UBR4,IFFO2	ALDH4A1,IFFO2	ALDH4A1	IMR90	Hi-C	24141950	ALDH4A1	25759	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	19276270	19276542	19276361	Y	AKR7A2	ALDH4A1,IFFO2	NA	NA	NA	NA	IFFO2	4638	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	19277155	19277462	19277361	Y	UBR4,IFFO2	ALDH4A1,IFFO2	NA	NA	NA	NA	IFFO2	3718	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	19360402	19360809	19360663	Y	IFFO2	NA	UBR4,IFFO2,ALDH4A1	IMR90	Hi-C	24141950	IFFO2	79222	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	19701557	19701789	19701674	Y	NA	NA	NA	NA	NA	NA	PQLC2	64737	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	19804974	19805167	19805055	Y	PLA2G2E	CAPZB	NA	NA	NA	NA	CAPZB	4899	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	20930711	20931037	20930891	Y	CDA	CDA,PINK1	PINK1	IMR90	Hi-C	24141950	CDA	17270	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr1	21588176	21588724	21588522	Y	ECE1,ECE1	NA	NA	NA	NA	NA	ECE1	81273	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	22221933	22221950	22221942	Y	NA	RP11-26H16.1,HSPG2	NA	NA	NA	NA	RP11-26H16.1	10641	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	23123668	23124069	23123697	Y	NA	NA	NA	NA	NA	NA	EPHB2	88336	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	23669506	23669991	23669712	Y	NA	HNRNPR,C1orf213,ZNF436	NA	NA	NA	NA	HNRNPR	677	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	23881180	23881765	23881497	Y	NA	E2F2,ID3	E2F2	IMR90	Hi-C	24141950	ID3	2520	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	23977708	23977880	23977794	Y	NA	RPL11	NA	NA	NA	NA	RPL11	38389	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	24229023	24229388	24229190	Y	NA	FUCA1	NA	NA	NA	NA	FUCA1	36239	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	24519628	24519970	24519647	Y	GRHL3	NA	MYOM3,IL22RA1,C1orf201,NIPAL3,RCAN3,RCAN3AS,C1orf130	IMR90	Hi-C	24141950	IL22RA1	52017	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	24691833	24692082	24691893	Y	PNRC2,GRHL3	NIPAL3	NA	NA	NA	NA	NIPAL3	48202	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	24854734	24855006	24854870	Y	NA	RCAN3	NA	NA	NA	NA	RCAN3	27347	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	26827232	26827869	26827508	Y	PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A	HMGN2	HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	HMGN2	30291	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	26946837	26947249	26947076	Y	CATSPER4,UBXN11,UBXN11,PIGV,GPATCH3,ARID1A	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	73275	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	26947342	26948198	26947481	Y	SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	72326	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	27024638	27025138	27024825	Y	SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV	ARID1A	NA	NA	NA	NA	ARID1A	4114	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	27191386	27191927	27191661	Y	FAM46B,C1orf172,HMGN2,RPS6KA1,SFN,NUDC,GPN2	ZDHHC18,SFN,GPN2,NUDC,GPATCH3	NA	NA	NA	NA	SFN	3753	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr1	27527451	27527688	27527509	Y	NA	SLC9A1,WDTC1	WDTC1,SLC9A1,C1orf172	IMR90	Hi-C	24141950	WDTC1	31319	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	27691785	27692261	27692091	Y	TMEM222,MAP3K6	TMEM222,RP11-4K3__A.5,SYTL1,MAP3K6,GPR3	NA	NA	NA	NA	MAP3K6	402	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	27907931	27908052	27907995	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	20890	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	27922522	27922947	27922946	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	5995	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	28268335	28268431	28268383	Y	NA	RPA2,XKR8	NA	NA	NA	NA	XKR8	15542	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	29503706	29504118	29503928	Y	NA	SRSF4	NA	NA	NA	NA	SRSF4	2381	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	31537719	31538012	31537814	Y	LAPTM5,PUM1	PUM1	NA	NA	NA	NA	PUM1	881	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	31627566	31627958	31627874	Y	SDC3,HCRTR1,NKAIN1	NA	SNRNP40,PUM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PUM1	90728	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	31628220	31628457	31628359	Y	NA	NA	PUM1,NKAIN1,SERINC2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PUM1	91382	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	32180603	32180986	32180867	Y	PEF1,SPOCD1,COL16A1	BAI2	PEF1,COL16A1	IMR90	Hi-C	24141950	BAI2	47508	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	32421622	32422096	32421696	Y	MARCKSL1,PEF1,PTP4A2,PTP4A2,KHDRBS1	PTP4A2	KHDRBS1,SPOCD1,PTP4A2,TINAGL1,COL16A1,PEF1,BAI2,TMEM39B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTP4A2	13165	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	33077721	33078012	33077949	Y	FNDC5	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	36492	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	33515825	33516245	33515960	Y	RNF19B	AK2,ADC	AK2,S100PBP,RNF19B,TMEM54,FNDC5,HPCA,ADC	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AK2	28352	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	33564918	33565286	33565197	Y	NA	AK2,ADC	NA	NA	NA	NA	ADC	20213	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	36555347	36555633	36555606	Y	STK40,SH3D21,EIF2C1,EIF2C3,ADPRHL2	ADPRHL2	NA	NA	NA	NA	ADPRHL2	2871	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	36616485	36616868	36616577	Y	STK40,SH3D21,CSF3R,EIF2C4,EIF2C1,EIF2C3,MAP7D1	TRAPPC3,MAP7D1	NA	NA	NA	NA	MAP7D1	2312	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	36626561	36626969	36626609	Y	STK40,SH3D21,LSM10,CSF3R,EIF2C4,EIF2C1,EIF2C3,ADPRHL2,MAP7D1,THRAP3	TRAPPC3,MAP7D1	NA	NA	NA	NA	MAP7D1	7381	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	36817040	36817280	36817137	Y	NA	SH3D21,STK40,LSM10	SH3D21,FAM176B	K562	ChIA-PET	22265404	STK40	32217	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	38009784	38010404	38010149	Y	SNIP1,MTF1,ZC3H12A	MEAF6,SNIP1,RP3-423B22.5,GNL2	MEAF6	IMR90	Hi-C	24141950	SNIP1	7499	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	38287158	38287399	38287321	Y	ZC3H12A,SNIP1,YRDC,MTF1	MANEAL,C1orf122,YRDC,MTF1	NA	NA	NA	NA	YRDC	15301	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	39651405	39651741	39651429	Y	NA	NA	NA	NA	NA	NA	MACF1	106417	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	40264988	40265120	40265045	Y	NA	BMP8B	HEYL,PPIE,BMP8B,MFSD2A,MACF1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	BMP8B	12455	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	40606256	40606595	40606426	Y	NA	PPT1,RLF	RLF,PPT1,SMAP2,COL9A2,ZMPSTE24,CAP1	IMR90	Hi-C	24141950	RLF	18450	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	41343431	41343839	41343651	Y	NA	CITED4	KCNQ4,CTPS,NFYC,CITED4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CITED4	17413	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	41952015	41952273	41952132	Y	EDN2	NA	NA	NA	NA	NA	FOXO6	126421	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	42127851	42128791	42128091	Y	NA	NA	NA	NA	NA	NA	FOXO6	302257	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	43407355	43407700	43407616	Y	YBX1,ERMAP,SZT2	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1	14830	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	43428386	43429108	43428580	Y	CLDN19,CCDC23,ERMAP,SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	5666	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	45376274	45376331	45376304	Y	NA	CCNB1IP1P1	NA	NA	NA	NA	CCNB1IP1P1	45898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	46689426	46689696	46689549	Y	FAAH,C1orf190	PIK3R3,POMGNT1,RAD54L	NA	NA	NA	NA	POMGNT1	5449	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	51245588	51245972	51245952	Y	NA	PHBP12	NA	NA	NA	NA	PHBP12	1576	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	54261078	54261111	54261098	Y	NA	NA	NA	NA	NA	NA	YIPF1	93296	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	54744858	54745090	54744974	Y	NA	NA	CYB5RL,MRPL37	IMR90	Hi-C	24141950	CYB5RL	81149	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	59083966	59084335	59084186	Y	NA	TACSTD2	TACSTD2,OMA1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	TACSTD2	42800	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	59280773	59281281	59281052	Y	FGGY,JUN	JUN	NA	NA	NA	NA	JUN	32988	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	59281873	59282217	59282125	Y	MYSM1,FGGY,JUN	JUN	NA	NA	NA	NA	JUN	34088	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	59369049	59370138	59369602	Y	FGGY	NA	NA	NA	NA	NA	JUN	121264	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	59608749	59609120	59609039	Y	NA	NA	NA	NA	NA	NA	FGGY	151190	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	64558632	64559006	64558819	Y	NA	NA	NA	NA	NA	NA	CFL1P3	251276	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	65888047	65888596	65888066	Y	LEPR,LEPROT,LEPR,LEPROT	LEPR,LEPROT	NA	NA	NA	NA	LEPROT	3777	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	66959447	66959772	66959623	Y	NA	SGIP1	PDE4B	IMR90	Hi-C	24141950	SGIP1	37294	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	67029939	67030347	67030122	Y	PDE4B	SGIP1	NA	NA	NA	NA	SGIP1	32873	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr1	68257383	68257657	68257565	Y	NA	GNG12	NA	NA	NA	NA	GNG12	39493	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	72749220	72749791	72749447	Y	NEGR1	NEGR1	NA	NA	NA	NA	NEGR1	2803	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	77165935	77166101	77166017	Y	NA	TPI1P1	ST6GALNAC3	IMR90	Hi-C	24141950	TPI1P1	2461	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	78350506	78350835	78350671	Y	FAM73A	NEXN	NA	NA	NA	NA	NEXN	1363	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	78469106	78469287	78469191	Y	DNAJB4	FUBP1,DNAJB4	NA	NA	NA	NA	DNAJB4	26247	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	78557346	78557710	78557476	Y	NA	NA	NA	NA	NA	NA	DNAJB4	114487	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	81941853	81942198	81942026	Y	NA	NA	NA	NA	NA	NA	ST13P20	243180	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	85795855	85796291	85796120	Y	DDAH1,CYR61	NA	NA	NA	NA	NA	BCL10	55082	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	85796595	85797055	85796822	Y	CYR61	NA	NA	NA	NA	NA	BCL10	55822	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	85968002	85968172	85968087	Y	DDAH1,CYR61	NA	NA	NA	NA	NA	DDAH1	73761	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	86049987	86050100	86050044	Y	NA	DDAH1,CYR61	NA	NA	NA	NA	CYR61	5543	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	86071867	86071976	86071922	Y	NA	DDAH1,CYR61	DDAH1,CYR61,ZNHIT6	IMR90	Hi-C	24141950	CYR61	27423	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	86078461	86078819	86078680	Y	DDAH1,CYR61	DDAH1,CYR61	DDAH1,ZNHIT6,CYR61,COL24A1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CYR61	34017	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	87800631	87801610	87800748	Y	NA	LMO4	NA	NA	NA	NA	LMO4	8480	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	92183243	92183457	92183382	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	119515	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	92198149	92198440	92198227	Y	TGFBR3	NA	NA	NA	NA	NA	RP11-91I11.1	134421	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	92202579	92202753	92202666	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	138851	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	94007993	94008357	94008092	Y	FNBP1L,BCAR3	NA	NA	NA	NA	NA	FNBP1L	96305	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	94158601	94159338	94158654	Y	GCLM,DNTTIP2,BCAR3	NA	BCAR3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCAR3	151368	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr1	94244939	94245309	94245199	Y	ARHGAP29,FNBP1L,BCAR3	NA	BCAR3,MIR760,FNBP1L	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCAR3	65397	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	94788386	94788592	94788436	Y	ARHGAP29,F3	ARHGAP29	ARHGAP29,ABCA4,BCAR3,GCLM	IMR90	Hi-C	24141950	ARHGAP29	49762	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	94891778	94892070	94891849	Y	NA	ABCD3	NA	NA	NA	NA	ABCD3	9845	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	95060137	95060382	95060260	Y	NA	NA	F3,ALG14,SLC44A3	IMR90	Hi-C	24141950	F3	54781	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	98011760	98012364	98012119	Y	NA	NA	NA	NA	NA	NA	DPYD	372241	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	98494244	98494658	98494592	Y	NA	NA	NA	NA	NA	NA	DPYD	109639	CAGE	RERF-LC-AI	hg19	FANTOM5	6.87298861676983
chr1	98606055	98606462	98606113	Y	NA	NA	NA	NA	NA	NA	RP5-1070A16.1	67841	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	98642709	98642844	98642773	Y	NA	RP5-1070A16.1	NA	NA	NA	NA	RP5-1070A16.1	31459	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	98693625	98693976	98693800	Y	NA	RP5-1070A16.1	NA	NA	NA	NA	RP5-1070A16.1	19322	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	100502622	100502881	100502754	Y	NA	HIAT1	NA	NA	NA	NA	HIAT1	969	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	109467804	109468470	109468110	Y	GPSM2,WDR47,SORT1,SORT1,PSRC1,CELSR2,CLCC1	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	35636	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	110947330	110947681	110947535	Y	NA	LAMTOR5-AS1,SLC16A4	NA	NA	NA	NA	SLC16A4	15626	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	111163364	111163623	111163482	Y	PROK1	NA	NA	NA	NA	NA	SLC16A4	231660	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	111188051	111188448	111188135	Y	LRIF1,CD53	NA	KCNA3	IMR90	Hi-C	24141950	CD53	225327	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	111729234	111729498	111729366	Y	NA	CEPT1,DRAM2	NA	NA	NA	NA	DRAM2	48396	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	114236415	114236760	114236542	Y	MAGI3	NA	NA	NA	NA	NA	PHTF1	63351	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	116694646	116694883	116694753	Y	NA	NA	NA	NA	NA	NA	SLC22A15	177527	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	117169735	117170114	117169931	Y	ATP1A1	IGSF3	NA	NA	NA	NA	IGSF3	38261	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	121154332	121154613	121154395	Y	NA	NA	NA	NA	NA	NA	EMBP1	104530	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	144009977	144010738	144010098	Y	NA	NA	NA	NA	NA	NA	NBPF8	134070	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	144533627	144534178	144533764	Y	PDE4DIP	RNU1-59P	PDE4DIP,SEC22B,NOTCH2NL,HIST2H2AB,HIST2H2AC,HIST2H2BE	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RNU1-59P	1589	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	145093258	145093700	145093462	Y	NA	PDE4DIP,SEC22B	NA	NA	NA	NA	SEC22B	520	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	145113904	145114998	145114671	Y	PDE4DIP,PDE4DIP,SEC22B,NBPF10,NOTCH2NL	PDE4DIP,SEC22B	NA	NA	NA	NA	SEC22B	19684	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	145396760	145397198	145397044	Y	NA	RP11-458D21.1,RNVU1-6,TXNIP	LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNVU1-6	16003	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	147080043	147080251	147080097	Y	PRKAB2,CHD1L,BCL9	NA	NA	NA	NA	NA	ACP6	60367	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	147806841	147807184	147807140	Y	NA	RNU1-122P	NA	NA	NA	NA	RNU1-122P	1955	CAGE	RERF-LC-AI	hg19	FANTOM5	4.04293448045284
chr1	149222771	149223127	149223106	Y	NA	RNU1-92P	NBPF10,SEC22B,NBPF15	MCF7	ChIA-PET	22265404	RNU1-92P	9471	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	149821015	149821647	149821349	Y	NA	HIST2H2BF,HIST2H3D,HIST2H3C,HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H2BE,BOLA1,HIST2H2AB	NA	NA	NA	NA	HIST2H2AA4	372	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	150185878	150186128	150186012	Y	HIST2H2AC,VPS45,RPRD2,ANP32E	ANP32E	NA	NA	NA	NA	ANP32E	20376	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	150577042	150577503	150577391	Y	CDC42SE1,PLEKHO1,PRPF3,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	22585	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	150585815	150586394	150586132	Y	CDC42SE1,PLEKHO1,ANP32E,PRPF3,FAM63A,FAM63A,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	13694	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	150949569	150950014	150949933	Y	ZNF687,TNFAIP8L2,SELENBP1,RFX5,POGZ,POGZ,PI4KB,PI4KB,CDC42SE1,MCL1,CTSS,ARNT,SETDB1,LASS2,PRUNE,FAM63A,FAM63A,FAM63A	CERS2,FAM63A,PRUNE	NA	NA	NA	NA	CERS2	4090	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	151168916	151169086	151168995	Y	NA	SCNM1,LYSMD1,VPS72,PIP5K1A	NA	NA	NA	NA	PIP5K1A	491	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	152140379	152140745	152140485	Y	NA	FLG-AS1	NA	NA	NA	NA	FLG-AS1	1778	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr1	153202444	153202707	153202576	Y	NA	NA	NA	NA	NA	NA	BX470102.3	301372	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	153936554	153936861	153936642	Y	UBAP2L,HAX1,S100A16,SNAPIN,ILF2,JTB,CREB3L4	GATAD2B,CRTC2,CREB3L4,SLC39A1,JTB,RAB13,RPS27,RP11-422P24.9	NA	NA	NA	NA	CREB3L4	1149	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	154154606	154155027	154154830	Y	SLC27A3,DENND4B,CRTC2,IL6R,ADAR,ADAR,UBAP2L,UBAP2L,TPM3	TPM3,UBAP2L,C1orf43	NA	NA	NA	NA	TPM3	10097	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	154392646	154393050	154392862	Y	CRTC2,UBAP2L,C1orf43,UBAP2L,ADAR,IL6R	IL6R	NA	NA	NA	NA	IL6R	16977	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	154529043	154529152	154529118	Y	NA	UBE2Q1	NA	NA	NA	NA	UBE2Q1	352	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	154973335	154973935	154973656	Y	ADAR,ADAR,MTX1,SHC1,ZBTB7B	PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	208	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	155164183	155164959	155164537	Y	NA	TRIM46,KRTCAP2,MIR92B,MTX1,THBS3,GBA	NA	NA	NA	NA	MIR92B	1215	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr1	155620238	155620623	155620432	Y	NA	DAP3,YY1AP1	NA	NA	NA	NA	DAP3	35128	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	156426931	156427503	156427197	Y	ARHGEF2,ARHGEF2,LMNA,SLC25A44,PMF1,C1orf182,SH2D2A,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	41117	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	156472693	156472952	156472780	Y	LMNA,C1orf182,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	4073	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	156629760	156630406	156629967	Y	PAQR6,PAQR6,C1orf182,CCT3,ISG20L2,GPATCH4,HAPLN2	RP11-284F21.7,NES,CRABP2	NA	NA	NA	NA	RP11-284F21.7	544	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	156662788	156663099	156662881	Y	NA	RP11-284F21.7,NES,CRABP2,RRNAD1,ISG20L2,MRPL24	BCAN,NES	IMR90	Hi-C	24141950	CRABP2	10509	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	156718467	156719136	156718868	Y	C1orf182,MEF2D,ETV3,ETV3,RRNAD1	CRABP2,RRNAD1,ISG20L2,MRPL24,PRCC,HDGF	NA	NA	NA	NA	PRCC	65	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	157989414	157989935	157989469	Y	KIRREL	KIRREL	NA	NA	NA	NA	KIRREL	28351	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	157990877	157991211	157991044	Y	NA	KIRREL	NA	NA	NA	NA	KIRREL	29814	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	159859603	159860031	159859945	Y	SLAMF9,COPA,SLAMF8,TAGLN2	C1orf204,CCDC19,TAGLN2	C1orf204,SLAMF8	IMR90	Hi-C	24141950	CCDC19	7922	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	159886226	159886307	159886250	Y	NA	CCDC19,TAGLN2,IGSF9	NA	NA	NA	NA	TAGLN2	7215	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	160696081	160696317	160696161	Y	CD48,FCER1G,CD244,SLAMF7	SLAMF7	NA	NA	NA	NA	SLAMF7	10720	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	160982920	160983992	160983766	Y	CD84,CD48,SLAMF7,CD244,NR1I3,FCGR2A,FCER1G,DEDD,DEDD,USF1,ARHGAP30	F11R,USF1	NA	NA	NA	NA	F11R	5146	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	161348767	161349231	161349047	Y	NDUFS2	NA	NA	NA	NA	NA	SDHC	66720	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	161369073	161369991	161369486	Y	NA	NA	ADAMTS4,NDUFS2,APOA2,TOMM40L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SDHC	87026	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	162511455	162511984	162511719	Y	UAP1,UHMK1	UHMK1,UAP1	NA	NA	NA	NA	UAP1	17339	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	164289956	164290255	164290071	Y	NA	HMGB3P6	NA	NA	NA	NA	HMGB3P6	33749	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	165797615	165798367	165798308	Y	UCK2	UCK2,TMCO1	NA	NA	NA	NA	TMCO1	2623	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	165823413	165823808	165823568	Y	NA	UCK2,TMCO1	NA	NA	NA	NA	TMCO1	28421	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	165868061	165868423	165868295	Y	NA	NA	NA	NA	NA	NA	TMCO1	73069	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	166828089	166828463	166828188	Y	POU2F1,POGK	POGK,TADA1	NA	NA	NA	NA	TADA1	15101	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	167035961	167036358	167035977	Y	NA	NA	NA	NA	NA	NA	ILDR2	93242	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	168582981	168583414	168583137	Y	NA	NA	ATP1B1,NME7,C1orf114,BLZF1	IMR90	Hi-C	24141950	TBX19	334703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	168961520	168961569	168961544	Y	NA	NA	ATP1B1	MCF7	ChIA-PET	22265404	ATP1B1	111366	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	169443033	169443373	169443298	Y	NA	SLC19A2,AL021068.1	NA	NA	NA	NA	SLC19A2	9868	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	170042588	170042670	170042627	Y	C1orf112	KIFAP3	NA	NA	NA	NA	KIFAP3	9679	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	172150675	172151005	172150697	Y	NA	NA	NA	NA	NA	NA	PIGC	260225	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	172507125	172507604	172507262	Y	NA	NA	NA	NA	NA	NA	PIGC	95895	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	172788027	172788361	172788212	Y	NA	NA	CENPL,DARS2,TNFSF4,LOC100506023,RC3H1,SERPINC1,TNFSF18	IMR90	Hi-C	24141950	TNFSF18	229742	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	172874674	172874828	172874762	Y	NA	NA	TNFSF4,LOC100506023,TNFSF18,SNORD47,SNORD81,GAS5,SNORD75,ZBTB37,SNORD80,SNORD76,SNORD44,LOC100506046,SNORD77,SNORD79,SNORD78,DARS2	IMR90	Hi-C	24141950	TNFSF18	143275	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	172878579	172879356	172878831	Y	TNFSF18	NA	TNFSF4,LOC100506023,TNFSF18,SNORD81,GAS5,SNORD75,SNORD47,SNORD79,LOC100506046,SNORD77,DARS2,SNORD78,SNORD80,ZBTB37,SNORD44,SNORD76	IMR90	Hi-C	24141950	TNFSF18	138747	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	172900674	172900969	172900756	Y	TNFSF18	NA	TNFSF4,LOC100506023,TNFSF18,DARS2,CENPL,ZBTB37,GAS5	IMR90	Hi-C	24141950	TNFSF18	117134	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	172903010	172903534	172903241	Y	TNFSF18,TNFSF4	NA	TNFSF4,LOC100506023,ZBTB37,GAS5,DARS2,CENPL	IMR90	Hi-C	24141950	TNFSF18	114569	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	173447359	173447668	173447399	Y	PRDX6	PRDX6	NA	NA	NA	NA	PRDX6	2954	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	178121154	178121309	178121232	Y	RASAL2	NA	NA	NA	NA	NA	RASAL2	60290	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	181074349	181074924	181074645	Y	XPR1,IER5	IER5	NA	NA	NA	NA	IER5	18711	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	182998797	182999044	182998924	Y	NA	LAMC1	NA	NA	NA	NA	LAMC1	8202	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	183149947	183150219	183150157	Y	LAMC2	NA	NA	NA	NA	NA	LAMC1	159352	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	184005350	184005919	184005662	Y	RGL1,GLT25D2	TSEN15	RGL1	IMR90	Hi-C	24141950	TSEN15	12892	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	184033703	184034036	184033838	Y	NA	TSEN15	NA	NA	NA	NA	TSEN15	14892	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	184265554	184265938	184265708	Y	NA	NA	C1orf21,EDEM3,TSEN15	IMR90	Hi-C	24141950	C1orf21	88254	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	184773428	184773803	184773695	Y	SWT1,SWT1,RNF2,FAM129A,EDEM3	NA	NA	NA	NA	NA	EDEM3	51381	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	184794829	184794875	184794854	Y	NA	NA	NA	NA	NA	NA	EDEM3	72782	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	198903935	198904934	198904858	Y	PTPRC	NA	NA	NA	NA	NA	RP11-104D3.2	449335	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	200379777	200379959	200379899	Y	NA	ZNF281	NA	NA	NA	NA	ZNF281	2593	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	200831452	200831819	200831500	Y	NA	NA	NA	NA	NA	NA	CAMSAP2	124766	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	200839315	200839533	200839446	Y	NA	NA	NA	NA	NA	NA	CAMSAP2	132629	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	201472589	201472996	201472808	Y	LMOD1,CSRP1,CSRP1,CSRP1	PHLDA3,RP11-134G8.7,CSRP1	NA	NA	NA	NA	RP11-134G8.7	1373	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	202217450	202217807	202217629	Y	NA	NA	NA	NA	NA	NA	UBE2T	91301	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	203101073	203101246	203101163	Y	NA	ADORA1	NA	NA	NA	NA	ADORA1	43291	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr1	203481982	203482534	203482093	Y	BTG2,ATP2B4	NA	NA	NA	NA	NA	ATP2B4	111155	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr1	204684045	204684323	204684297	Y	NA	NA	NFASC,LRRN2	IMR90	Hi-C	24141950	MDM4	200534	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	205253892	205254222	205253971	Y	NUAK2	NUAK2	NA	NA	NA	NA	NUAK2	34661	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	205442172	205442546	205442359	Y	CNTN2,TMEM81	CDK18	KLHDC8A,NUAK2,MIR135B,LOC284576,LEMD1,CDK18	IMR90	Hi-C	24141950	CDK18	29177	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	205475126	205475451	205475289	Y	NA	CDK18	NA	NA	NA	NA	CDK18	3403	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	206531313	206531464	206531384	Y	RASSF5,RASSF5,MAPKAPK2,IKBKE,DYRK3	NA	NA	NA	NA	NA	IKBKE	110327	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	206931189	206931520	206931334	Y	IKBKE,RASSF5,FAIM3,FAIM3,IL10	NA	NA	NA	NA	NA	MAPKAPK2	74900	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	206966600	206966901	206966735	Y	IKBKE,RASSF5,RASSF5,DYRK3,MAPKAPK2,IL10,IL19	NA	MAPKAPK2,IL10,IL19	IMR90	Hi-C	24141950	MAPKAPK2	110311	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	209830400	209831026	209830727	Y	TRAF3IP3,G0S2,C1orf74,LAMB3	G0S2	NA	NA	NA	NA	G0S2	15739	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	209996933	209997272	209996990	Y	NA	C1orf74,DIEXF	DIEXF,IRF6,C1orf74	K562	ChIA-PET	22265404	DIEXF	2080	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	212650622	212650921	212650683	Y	ATF3,ATF3,ATF3	NENF	NSL1,ATF3,FAM71A,BATF3,FLVCR1,VASH2,ANGEL2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	NENF	46393	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	212659054	212659720	212659497	Y	ATF3,ATF3,ATF3	NA	ATF3,FAM71A,ANGEL2,NSL1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	NENF	54825	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	212731490	212732709	212732386	Y	NA	ATF3	ATF3	K562,MCF7	ChIA-PET	22265404	ATF3	3967	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr1	218523725	218524123	218523798	Y	NA	TGFB2	NA	NA	NA	NA	TGFB2	6148	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	218633382	218633612	218633512	Y	NA	NA	NA	NA	NA	NA	TGFB2	115805	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	218636802	218637167	218637004	Y	NA	NA	NA	NA	NA	NA	TGFB2	119225	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	218649784	218650063	218649859	Y	NA	NA	TGFB2,LOC728463,RRP15	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TGFB2	132207	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	218666268	218666506	218666426	Y	NA	NA	TGFB2,LOC728463,LOC643723	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TGFB2	148691	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	218671989	218672275	218672071	Y	NA	NA	TGFB2,LOC643723,LOC728463	IMR90	Hi-C	24141950	TGFB2	154412	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	219497639	219497836	219497817	Y	NA	NA	TGFB2,LOC728463,RRP15	IMR90	Hi-C	24141950	LYPLAL1	152453	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	219498496	219498646	219498574	Y	NA	NA	TGFB2,LOC728463,RRP15	IMR90	Hi-C	24141950	LYPLAL1	153310	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	220427006	220427444	220427299	Y	NA	MORF4L1P1,RAB3GAP2	NA	NA	NA	NA	MORF4L1P1	2094	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	221916049	221916599	221916319	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	2531	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	222638782	222639204	222638963	Y	NA	NA	DUSP10,MIA3,AIDA,BROX	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TAF1A	122071	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	223914239	223914747	223914523	Y	TP53BP2,FBXO28,CAPN2	CAPN2	NA	NA	NA	NA	CAPN2	26944	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	224180261	224180516	224180350	Y	NA	NA	NA	NA	NA	NA	FBXO28	119273	CAGE	RERF-LC-AI	hg19	FANTOM5	4.04293448045284
chr1	224269875	224270192	224270045	Y	FBXO28	FBXO28	TP53BP2,NVL	IMR90	Hi-C	24141950	FBXO28	29597	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	224458940	224459060	224459002	Y	NA	NA	NA	NA	NA	NA	NVL	57029	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	224811590	224812043	224811760	Y	NA	NA	NA	NA	NA	NA	WDR26	188855	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	224819300	224819585	224819443	Y	NA	NA	NA	NA	NA	NA	WDR26	196565	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	225845408	225845613	225845516	Y	ENAH	ENAH,RP11-145A3.1	NA	NA	NA	NA	ENAH	6564	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	226297611	226298113	226297674	Y	NA	NA	ACBD3,C1orf55,H3F3A,LIN9	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	H3F3A	50059	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	226315631	226315825	226315781	Y	PARP1,LIN9,PYCR2	NA	NA	NA	NA	NA	ACBD3	56606	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	226890865	226891416	226891300	Y	ITPKB	NA	NA	NA	NA	NA	PSEN2	164469	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	229473732	229474385	229474330	Y	NA	NA	NA	NA	NA	NA	RAB4A	68910	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	229547907	229548085	229548007	Y	NA	NA	NA	NA	NA	NA	NUP133	94018	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	229825145	229825279	229825212	Y	NA	NA	TAF5L,URB2,GALNT2,PGBD5	IMR90	Hi-C	24141950	URB2	65164	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	230248068	230248475	230248108	Y	NA	NA	NA	NA	NA	NA	GALNT2	56532	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	232765644	232766127	232765957	Y	NA	NA	TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2	IMR90	Hi-C	24141950	RNU1-74P	199806	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	234275805	234276023	234275906	Y	NA	NA	NA	NA	NA	NA	RP5-827C21.4	231316	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	234728712	234729023	234728867	Y	NA	IRF2BP2	NA	NA	NA	NA	IRF2BP2	14248	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr1	234792654	234793437	234793098	Y	NA	IRF2BP2	IRF2BP2,TARBP1,LINC00184,LOC100506810	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IRF2BP2	49383	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	235133014	235133422	235133155	Y	NA	NA	LINC00184,LOC100506810,IRF2BP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TOMM20	156829	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	235242252	235242564	235242410	Y	IRF2BP2,ARID4B,ARID4B	TOMM20	IRF2BP2	MCF7	ChIA-PET	22265404	TOMM20	47687	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	240306890	240307603	240307416	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23852	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	240307621	240308162	240308005	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23293	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr1	240437557	240437954	240437680	Y	FMN2	NA	NA	NA	NA	NA	ADH5P3	106102	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	243487001	243487352	243487082	Y	CEP170,SDCCAG8	NA	NA	NA	NA	NA	SDCCAG8	69681	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	245255337	245255432	245255385	Y	NA	NA	NA	NA	NA	NA	EFCAB2	124330	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	247035132	247035504	247035470	Y	CNST,ZNF669,AHCTF1	NA	NA	NA	NA	NA	AHCTF1	57776	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	247297966	247298129	247298007	Y	NA	ZNF669	NA	NA	NA	NA	ZNF669	32292	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr1	248894360	248894532	248894495	Y	NA	NA	NA	NA	NA	NA	MIR3124	224044	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	500969	501047	501008	Y	ZMYND11	NA	NA	NA	NA	NA	DIP2C	232636	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	2256285	2256680	2256409	Y	NA	NA	NA	NA	NA	NA	ADARB2	478615	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr10	3028046	3028193	3028123	Y	NA	NA	LINC00200	IMR90	Hi-C	24141950	PFKP	78332	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	3123873	3124204	3123982	Y	NA	PFKP	NA	NA	NA	NA	PFKP	17348	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	3509617	3509911	3509759	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PITRM1	296614	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	3510310	3510716	3510597	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PITRM1	297307	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr10	3710838	3711066	3710976	Y	KLF6	NA	KLF6	K562	ChIA-PET	22265404	KLF6	114407	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	3845250	3845852	3845788	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	19777	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	3848037	3849536	3848891	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	22564	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr10	3983198	3983475	3983337	Y	NA	NA	KLF6,LOC100216001,LOC338588	IMR90	Hi-C	24141950	KLF6	157725	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	4705159	4705783	4705486	Y	NA	NA	NA	NA	NA	NA	AKR1C1	227013	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr10	4713647	4713873	4713697	Y	NA	NA	NA	NA	NA	NA	AKR1C1	218923	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr10	4991516	4991911	4991654	Y	NA	NA	tAKR,AKR1C2,AKR1C3,UCN3,NET1,TUBAL3	IMR90	Hi-C	24141950	AKR1C1	58720	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	5783071	5783414	5783247	Y	NA	NA	GDI2	IMR90	Hi-C	24141950	FAM208B	58270	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	6171883	6172155	6171968	Y	IL15RA,RBM17,RBM17,PFKFB3,PFKFB3	RBM17,PFKFB3	NA	NA	NA	NA	PFKFB3	12726	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	6183553	6183785	6183703	Y	NA	PFKFB3	NA	NA	NA	NA	PFKFB3	1096	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	6237775	6238114	6237949	Y	IL15RA,PFKFB3,PFKFB3	NA	NA	NA	NA	NA	PFKFB3	52894	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	6281305	6281494	6281382	Y	IL15RA,PFKFB3,PFKFB3	NA	NA	NA	NA	NA	PFKFB3	96424	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	6443408	6443712	6443449	Y	PFKFB3,PFKFB3	NA	IL2RA,PFKFB3,LOC399715,FBXO18,RBM17,IL15RA,PRKCQ	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PRKCQ	176551	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	6836289	6836715	6836468	Y	NA	NA	NA	NA	NA	NA	RP11-554I8.2	58945	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	10953472	10953723	10953520	Y	NA	NA	NA	NA	NA	NA	SFTA1P	118529	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	11835953	11836243	11836176	Y	C10orf47	NA	NA	NA	NA	NA	ECHDC3	53588	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	13200624	13201003	13200885	Y	NA	MCM10	NA	NA	NA	NA	MCM10	551	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	13390886	13391219	13391148	Y	NA	PHYH,SEPHS1	NA	NA	NA	NA	SEPHS1	2589	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	13391797	13392252	13392084	Y	SEPHS1	PHYH,SEPHS1	NA	NA	NA	NA	SEPHS1	3500	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	13754952	13755339	13755135	Y	NA	NA	NA	NA	NA	NA	PRPF18	128025	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	13908290	13908478	13908416	Y	NA	NA	NA	NA	NA	NA	PRPF18	281363	CAGE	RERF-LC-AI	hg19	FANTOM5	7.6815755128604
chr10	13928984	13929094	13929038	Y	NA	NA	NA	NA	NA	NA	PRPF18	302057	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14003091	14003406	14003339	Y	NA	NA	NA	NA	NA	NA	PRPF18	376164	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14039311	14039587	14039450	Y	FRMD4A	NA	NA	NA	NA	NA	PRPF18	412384	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14064122	14064423	14064398	Y	NA	NA	NA	NA	NA	NA	PRPF18	437195	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14131369	14132062	14131667	Y	NA	NA	PRPF18	IMR90	Hi-C	24141950	FRMD4A	370079	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	14217181	14217543	14217379	Y	FRMD4A	NA	NA	NA	NA	NA	FRMD4A	284598	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14417107	14417451	14417285	Y	NA	NA	FRMD4A,FAM107B,PRPF18	IMR90	Hi-C	24141950	FRMD4A	84690	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14441741	14441971	14441846	Y	NA	NA	FRMD4A,MIR1265	IMR90	Hi-C	24141950	FRMD4A	60170	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14447046	14447458	14447244	Y	NA	NA	FRMD4A,FAM107B	IMR90	Hi-C	24141950	FRMD4A	54683	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	14518978	14519126	14519049	Y	NA	FRMD4A	FRMD4A	IMR90	Hi-C	24141950	FRMD4A	16837	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	16481463	16481634	16481561	Y	NA	PTER,RNU2-18P	NA	NA	NA	NA	PTER	4521	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	17707752	17708081	17707913	Y	VIM,ST8SIA6,STAM	STAM	NA	NA	NA	NA	STAM	23628	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	18897565	18897858	18897712	Y	NSUN6,ARL5B	NSUN6,ARL5B	NA	NA	NA	NA	NSUN6	40693	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	19927503	19927756	19927630	Y	NA	NA	NA	NA	NA	NA	PLXDC2	175412	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	21386477	21386751	21386615	Y	NA	NA	NA	NA	NA	NA	NEBL	74365	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr10	21809167	21809536	21809441	Y	C10orf114,C10orf140	MLLT10	NA	NA	NA	NA	MLLT10	11558	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	21816029	21816444	21816223	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	4650	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr10	21816987	21817223	21817104	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	3871	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	22026318	22026683	22026671	Y	EBLN1	NA	NA	NA	NA	NA	RN7SKP37	193389	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	22519481	22519667	22519580	Y	BMI1,EBLN1	NA	COMMD3-BMI1,PIP4K2A,ARMC3,DNAJC1,LOC100499489	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	COMMD3	83236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	22725331	22726270	22725901	Y	NA	NA	NA	NA	NA	NA	BMI1	117191	CAGE	RERF-LC-AI	hg19	FANTOM5	4.04293448045284
chr10	22887940	22888243	22888209	Y	NA	NA	NA	NA	NA	NA	PIP4K2A	113241	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	22961361	22961802	22961720	Y	NA	PIP4K2A	NA	NA	NA	NA	PIP4K2A	39682	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	24993053	24993414	24993236	Y	GPR158,ARHGAP21	ARHGAP21	NA	NA	NA	NA	ARHGAP21	17183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	26775885	26776759	26776046	Y	APBB1IP,ABI1	NA	NA	NA	NA	NA	APBB1IP	50753	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	27354652	27354729	27354695	Y	NA	ANKRD26	NA	NA	NA	NA	ANKRD26	32692	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	29761620	29761743	29761682	Y	NA	NA	NA	NA	NA	NA	PTCHD3P1	65289	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	30073207	30073608	30073571	Y	SVIL	SVIL	SVIL	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SVIL	49497	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	31892273	31892723	31892643	Y	NA	NA	ZEB1	IMR90	Hi-C	24141950	ZEB1-AS1	284897	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	31986692	31987073	31986913	Y	NA	NA	ARHGAP12,ZEB1,ZNF438	IMR90	Hi-C	24141950	ARHGAP12	228669	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	32048872	32049424	32049213	Y	ZEB1,KIF5B	NA	ZNF438,ZEB1,ARHGAP12,LYZL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	166318	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr10	32621222	32621521	32621374	Y	ARHGAP12,CCDC7,C10orf68,EPC1	EPC1	NA	NA	NA	NA	EPC1	44205	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	32735821	32736068	32735865	Y	NA	CCDC7	C10orf68	MCF7	ChIA-PET	22265404	CCDC7	2753	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	33250851	33251304	33251058	Y	NA	RP11-462L8.1,ITGB1	NA	NA	NA	NA	RP11-462L8.1	5078	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	33562254	33562552	33562425	Y	ITGB1,ITGB1,NRP1	NA	NA	NA	NA	NA	NRP1	60638	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	35668149	35668482	35668241	Y	CREM,CREM	NA	NA	NA	NA	NA	CCNY	134196	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	43249248	43249682	43249506	Y	NA	BMS1	NA	NA	NA	NA	BMS1	26567	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	43600895	43601120	43601049	Y	RASGEF1A	CSGALNACT2	NA	NA	NA	NA	CSGALNACT2	30814	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	43633157	43633403	43633253	Y	RASGEF1A	CSGALNACT2	NA	NA	NA	NA	CSGALNACT2	1223	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	44100382	44100859	44100681	Y	CSGALNACT2	ZNF239,CAP1P2,ZNF485,ZNF32	NA	NA	NA	NA	ZNF485	527	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	45868742	45869084	45868822	Y	ANUBL1,OR13A1,ALOX5	ALOX5	NA	NA	NA	NA	ALOX5	1081	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	48323344	48323752	48323648	Y	NA	RP11-463P17.1,ZNF488	SYT15,GPRIN2	IMR90	Hi-C	24141950	RP11-463P17.1	6445	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	50791340	50791620	50791497	Y	NA	PGBD3,ERCC6	NA	NA	NA	NA	ERCC6	45756	CAGE	RERF-LC-AI	hg19	FANTOM5	6.06440172067926
chr10	52083052	52083210	52083101	Y	FAM21A	NA	NA	NA	NA	NA	FAM21A	257404	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	54367095	54367120	54367106	Y	NA	NA	NA	NA	NA	NA	DKK1	295039	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	60935384	60935742	60935425	Y	NA	NA	NA	NA	NA	NA	CCDC6	728672	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	65389747	65390882	65390384	Y	NA	NA	NA	NA	NA	NA	REEP3	110624	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	69609160	69609390	69609211	Y	NA	DNAJC12,SIRT1	SIRT1	K562	ChIA-PET	22265404	DNAJC12	13236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	69854882	69855277	69855187	Y	HERC4	HERC4	ATOH7,HNRNPH3,PBLD,MYPN,HERC4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HERC4	21777	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr10	71109104	71109433	71109270	Y	NA	NA	NA	NA	NA	NA	HK1	81364	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	72082681	72083053	72082867	Y	NA	NA	NA	NA	NA	NA	LRRC20	57329	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	73526437	73526878	73526654	Y	CDH23,C10orf54,C10orf105	C10orf54	NA	NA	NA	NA	C10orf54	4377	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	73620184	73620641	73620392	Y	DNAJB12,DDIT4,C10orf54,PSAP	PSAP	PSAP,C10orf54,CDH23,CHST3	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PSAP	11058	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	74056833	74058104	74057179	Y	PSAP,DDIT4,DNAJB12	DDIT4	NA	NA	NA	NA	DDIT4	25155	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr10	74080430	74080993	74080646	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	31995	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	74091661	74092150	74091920	Y	PSAP,DDIT4,DNAJB12	DNAJB12	NA	NA	NA	NA	DNAJB12	20838	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	75221740	75221926	75221833	Y	NA	ANXA7,RP11-345K20.2,RP11-137L10.6,PPP3CB	NA	NA	NA	NA	RP11-137L10.6	31357	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	75768391	75768772	75768419	Y	NA	VCL	NA	NA	NA	NA	VCL	12519	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	77155063	77155414	77155221	Y	NA	ZNF503	NA	NA	NA	NA	ZNF503	4250	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	77164585	77164731	77164659	Y	ZNF503	ZNF503	NA	NA	NA	NA	ZNF503	4921	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	79176142	79176460	79176291	Y	NA	NA	NA	NA	NA	NA	KCNMA1	219893	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	79265772	79266169	79265902	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	130184	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	79291052	79291779	79291330	Y	KCNMA1	NA	NA	NA	NA	NA	KCNMA1	104574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	88160011	88160294	88160175	Y	NA	NA	WAPAL	MCF7	ChIA-PET	22265404	WAPAL	119278	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	88470805	88471213	88471023	Y	NA	BMPR1A	NA	NA	NA	NA	BMPR1A	43194	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	89519838	89520126	89519981	Y	NA	NA	NA	NA	NA	NA	CFL1P1	55559	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	90643265	90643581	90643488	Y	LIPK,FAS,STAMBPL1	STAMBPL1	ACTA2	IMR90	Hi-C	24141950	STAMBPL1	5774	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	91020368	91020477	91020401	Y	IFIT5,IFIT1,IFIT3,IFIT3,IFIT2	RP11-149I23.3,IFIT2	NA	NA	NA	NA	RP11-149I23.3	21045	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	91073442	91073645	91073541	Y	NA	RP11-149I23.3,IFIT2,IFIT3	IFIT3	IMR90	Hi-C	24141950	IFIT3	12006	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	93109121	93109290	93109218	Y	NA	NA	NA	NA	NA	NA	HECTD2	58806	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	94351391	94351691	94351485	Y	CPEB3	IDE,KIF11	NA	NA	NA	NA	KIF11	348	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	94831659	94831948	94831694	Y	CYP26A1,CYP26A1	NA	NA	NA	NA	NA	XRCC6P1	135436	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	95193537	95193891	95193765	Y	MYOF	MYOF	NA	NA	NA	NA	MYOF	46183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	95225325	95225770	95225711	Y	MYOF	MYOF,CEP55	NA	NA	NA	NA	MYOF	14304	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr10	95228207	95228553	95228471	Y	MYOF,CEP55,CEP55	MYOF,CEP55	NA	NA	NA	NA	MYOF	11521	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr10	99408797	99409067	99408957	Y	NA	MORN4,AVPI1	NA	NA	NA	NA	MORN4	17453	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	100076500	100076699	100076593	Y	C10orf28,HPS1	NA	LOXL4,C10orf28,PYROXD2,HPS1,HPSE2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LOXL4	50493	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	101539519	101539906	101539726	Y	NA	COX15	NA	NA	NA	NA	COX15	49662	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	101765990	101766360	101766233	Y	NA	DNMBP	NA	NA	NA	NA	DNMBP	1316	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr10	102488726	102488983	102488821	Y	NA	PAX2	PAX2	IMR90	Hi-C	24141950	PAX2	4377	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	102490299	102490653	102490523	Y	PAX2	PAX2	NA	NA	NA	NA	PAX2	2707	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	103124623	103124787	103124739	Y	FBXW4	BTRC	DPCD,POLL	IMR90	Hi-C	24141950	BTRC	12803	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	103699141	103699397	103699242	Y	NA	NA	NA	NA	NA	NA	C10orf76	114553	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	104387544	104387817	104387672	Y	GBF1,CUEDC2,ACTR1A	TRIM8	NA	NA	NA	NA	TRIM8	14436	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	104401686	104402330	104401988	Y	NA	NA	NA	NA	NA	NA	TRIM8	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	112123790	112124003	112123953	Y	MXI1	NA	SMC3,DUSP5,RBM20	IMR90	Hi-C	24141950	SMNDC1	61081	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	112159079	112159451	112159258	Y	NA	NA	SMC3,DUSP5	IMR90	Hi-C	24141950	DUSP5	96145	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	112168008	112168205	112168118	Y	DUSP5	NA	DUSP5	IMR90	Hi-C	24141950	DUSP5	87391	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	112170161	112170538	112170357	Y	DUSP5	NA	DUSP5	IMR90	Hi-C	24141950	DUSP5	85058	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr10	112259301	112259712	112259445	Y	MXI1,PDCD4,DUSP5	DUSP5	NA	NA	NA	NA	DUSP5	3705	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr10	112290201	112290297	112290249	Y	NA	DUSP5,SMC3	NA	NA	NA	NA	DUSP5	34605	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	114035592	114035948	114035764	Y	NA	NA	NA	NA	NA	NA	GPAM	62457	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	114594508	114594817	114594706	Y	TCF7L2	NA	NA	NA	NA	NA	TCF7L2	113192	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	114847181	114847492	114847280	Y	TCF7L2	NA	NA	NA	NA	NA	TCF7L2	139172	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	116582671	116583074	116582920	Y	NA	FAM160B1	NA	NA	NA	NA	FAM160B1	3168	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	116902844	116903191	116903017	Y	ATRNL1	NA	NA	NA	NA	NA	ATRNL1	51720	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	119311834	119312129	119311974	Y	RAB11FIP2,EMX2	NA	NA	NA	NA	NA	PDZD8	178856	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	120692616	120692979	120692798	Y	NA	NA	NA	NA	NA	NA	NANOS1	94249	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	121065390	121065964	121065436	Y	NA	NA	NA	NA	NA	NA	PRDX3	129045	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	123900074	123900243	123900143	Y	NA	NA	NA	NA	NA	NA	TACC2	153385	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	124222687	124222865	124222833	Y	NA	HTRA1	NA	NA	NA	NA	HTRA1	3646	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	124254349	124254758	124254614	Y	NA	HTRA1	NA	NA	NA	NA	HTRA1	35308	CAGE	RERF-LC-AI	hg19	FANTOM5	11.7245099933132
chr10	124636899	124637143	124637021	Y	NA	FAM24B,RP11-564D11.3	NA	NA	NA	NA	FAM24B	14	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	125754916	125755682	125755196	Y	CHST15	NA	NA	NA	NA	NA	CHST15	95524	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	127770762	127770961	127770902	Y	NA	NA	NA	NA	NA	NA	FANK1	187654	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	132099901	132100191	132100002	Y	NA	NA	NA	NA	NA	NA	GLRX3	167238	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	133879247	133879524	133879406	Y	NA	NA	BNIP3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BNIP3	85812	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	134208745	134209013	134208865	Y	NA	NA	NA	NA	NA	NA	LRRC27	65131	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	134369255	134369540	134369399	Y	PWWP2B,INPP5A	INPP5A	NA	NA	NA	NA	INPP5A	19931	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	134826942	134827305	134827042	Y	NA	NA	LOC399829,INPP5A	IMR90	Hi-C	24141950	TTC40	72615	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	135072735	135073128	135072895	Y	TUBGCP2,ADAM8	ADAM8,ZNF511	NA	NA	NA	NA	ADAM8	15244	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr10	135074691	135075148	135074934	Y	TUBGCP2,ADAM8	ADAM8,ZNF511,TUBGCP2	NA	NA	NA	NA	ADAM8	13224	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	269337	269903	269511	Y	TMEM80,TALDO1,SIGIRR,DEAF1,IFITM2,IFITM1,ATHL1	PSMD13,SIRT3,RP11-326C3.2,ATHL1,IFITM2	NA	NA	NA	NA	RP11-326C3.2	15402	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	312288	312763	312359	Y	TMEM80,TALDO1,SIGIRR,DEAF1,ATHL1,IFITM2,IFITM1	RP11-326C3.2,ATHL1,IFITM2,IFITM3	NA	NA	NA	NA	IFITM2	6657	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	655302	655449	655380	Y	SIRT3,NLRP6,CDHR5,CHID1	IRF7,EPS8L2,TMEM80,DEAF1	NA	NA	NA	NA	EPS8L2	36989	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	1409546	1409852	1409608	Y	KRTAP5-1,KRTAP5-6,KRTAP5-5,KRTAP5-3	BRSK2	NA	NA	NA	NA	BRSK2	417	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	1523761	1524132	1523960	Y	NA	NA	NA	NA	NA	NA	DUSP8	67018	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	1851395	1851620	1851555	Y	NA	NA	NA	NA	NA	NA	CTSD	68173	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	2164154	2164440	2164238	Y	IGF2	IGF2	NA	NA	NA	NA	IGF2	4393	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	2197020	2197182	2197031	Y	KRTAP5-6,ASCL2,TH	IGF2	NA	NA	NA	NA	IGF2	28187	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	2643075	2643474	2643317	Y	NA	NA	NA	NA	NA	NA	KCNQ1OT1	75750	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	2847272	2847432	2847347	Y	NA	NA	NA	NA	NA	NA	CDKN1C	57679	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	2988914	2989223	2989024	Y	MRGPRG,SLC22A18	PHLDA2,NAP1L4	NA	NA	NA	NA	NAP1L4	22384	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	3190882	3191107	3191009	Y	NA	OSBPL5	NA	NA	NA	NA	OSBPL5	4913	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	3443739	3443990	3443855	Y	NA	ZNF195	NA	NA	NA	NA	ZNF195	45291	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	3918054	3918451	3918253	Y	NA	STIM1,MIR4687	NA	NA	NA	NA	MIR4687	42762	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	4129900	4130200	4130091	Y	OR52M1,OR52K2,OR52K1,C11orf40,OR52I1	RRM1	NA	NA	NA	NA	RRM1	15963	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	6676048	6676412	6676073	Y	OR52W1,APBB1,APBB1,TRIM3,OR2D2,OR2D3,ZNF214,DCHS1	TAF10,TPP1,MRPL17	NA	NA	NA	NA	MRPL17	26220	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	9385760	9386326	9386092	Y	ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7	IPO7	ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IPO7	17843	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr11	9587499	9588027	9587720	Y	DENND5A,ZNF143,WEE1,SWAP70	WEE1	ZNF143,LOC644656	MCF7,K562	ChIA-PET	22265404	WEE1	5201	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	9635436	9636077	9635827	Y	DENND5A,ZNF143,WEE1,SWAP70	WEE1,SWAP70	WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	WEE1	42208	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	9770028	9770265	9770206	Y	WEE1,SWAP70	SBF2-AS1	NA	NA	NA	NA	SBF2-AS1	7574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	9786985	9787566	9787311	Y	NA	SBF2-AS1	NA	NA	NA	NA	SBF2-AS1	9146	CAGE	RERF-LC-AI	hg19	FANTOM5	10.9159230972227
chr11	10681207	10681687	10681411	Y	ADM,MRVI1,MRVI1	MRVI1	LYVE1,MRVI1-AS1	IMR90	Hi-C	24141950	MRVI1	31848	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	10955517	10955651	10955533	Y	NA	CTD-2003C8.2	EIF4G2,MICALCL,CTR9,GALNTL4,LOC729013,ZBED5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2003C8.2	36648	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	11998818	11999068	11999003	Y	MICALCL	NA	NA	NA	NA	NA	RP13-631K18.5	107370	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12097914	12098716	12098251	Y	PARVA,MICALCL,MICAL2	RP13-631K18.5,MICAL2	MICAL2,DKK3,USP47,MICALCL	IMR90	Hi-C	24141950	RP13-631K18.5	7722	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12101706	12102070	12101803	Y	DKK3,DKK3,PARVA,MICALCL,MICAL2	RP13-631K18.5,MICAL2	MICAL2,DKK3,USP47,MICALCL	IMR90	Hi-C	24141950	RP13-631K18.5	4368	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	12109558	12109847	12109697	Y	PARVA,MICALCL,MICAL2	RP13-631K18.5,MICAL2	MICAL2,TEAD1,MICALCL,DKK3,USP47	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP13-631K18.5	3120	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12111660	12111980	12111765	Y	NA	RP13-631K18.5,MICAL2	MICAL2,TEAD1,MICALCL,DKK3,USP47	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MICAL2	1563	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12132692	12132808	12132735	Y	MICAL2	RP13-631K18.5,MICAL2	NA	NA	NA	NA	MICAL2	19149	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12133218	12133350	12133292	Y	MICAL2	RP13-631K18.5,MICAL2	NA	NA	NA	NA	MICAL2	19675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	12181262	12181458	12181363	Y	MICALCL,MICAL2	NA	MICALCL	IMR90	Hi-C	24141950	MICAL2	67719	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	12184848	12185162	12185016	Y	NA	NA	NA	NA	NA	NA	MICAL2	71305	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	12188567	12188982	12188726	Y	NA	NA	NA	NA	NA	NA	MICAL2	75024	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr11	12197316	12197738	12197633	Y	MICAL2,MICALCL	NA	NA	NA	NA	NA	MICAL2	83773	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	12199343	12199732	12199431	Y	NA	NA	MICALCL	IMR90	Hi-C	24141950	MICAL2	85800	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12204138	12204505	12204342	Y	MICAL2,MICALCL	NA	NA	NA	NA	NA	MICAL2	90595	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	12204570	12205016	12204699	Y	MICAL2	NA	NA	NA	NA	NA	MICAL2	91027	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12309352	12309734	12309588	Y	TEAD1,DKK3,MICAL2,PARVA,MICALCL	NA	NA	NA	NA	NA	PARVA	86998	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12697923	12698543	12698251	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	3954	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12698857	12698926	12698896	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	4888	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12701917	12702070	12702017	Y	TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	7948	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12772830	12773175	12773002	Y	NA	NA	NA	NA	NA	NA	TEAD1	78861	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	12973520	12973623	12973568	Y	NA	NA	NA	NA	NA	NA	TEAD1	279551	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	13468446	13468721	13468666	Y	NA	BTBD10	NA	NA	NA	NA	BTBD10	14123	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	19599589	19599793	19599635	Y	NAV2,NAV2	NA	NA	NA	NA	NA	NAV2	229318	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	19649981	19650160	19650072	Y	NAV2	NA	NA	NA	NA	NA	NAV2	279710	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	19748565	19748818	19748690	Y	NA	NA	NA	NA	NA	NA	NAV2	378294	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	19938604	19938915	19938760	Y	NA	NA	NA	NA	NA	NA	HTATIP2	444316	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	27682701	27682852	27682777	Y	NA	NA	NA	NA	NA	NA	BDNF	58753	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	27693843	27694020	27693988	Y	BDNF,BDNF,BDNF,BDNF,BDNF,BDNF	BDNF	NA	NA	NA	NA	BDNF	47585	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	28779294	28779601	28779473	Y	NA	NA	BDNF,BDNF-AS1,KIF18A	IMR90	Hi-C	24141950	RP11-115J23.1	57132	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	28853592	28853798	28853653	Y	NA	NA	BDNF-AS1,BDNF	IMR90	Hi-C	24141950	RP11-115J23.1	131430	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	28855204	28855664	28855372	Y	NA	NA	BDNF-AS1,BDNF	IMR90	Hi-C	24141950	RP11-115J23.1	133042	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	28857853	28858464	28857991	Y	NA	NA	BDNF-AS1,BDNF	IMR90	Hi-C	24141950	RP11-115J23.1	135691	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	31489332	31489346	31489341	Y	NA	IMMP1L,ELP4	NA	NA	NA	NA	IMMP1L	39846	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	32915475	32916456	32915913	Y	NA	QSER1	NA	NA	NA	NA	QSER1	2751	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	33713598	33714029	33713919	Y	CD59	CD59	NA	NA	NA	NA	CD59	41962	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	34706877	34707176	34707110	Y	ABTB2,EHF	NA	NA	NA	NA	NA	PDHX	228200	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	36132577	36133046	36132774	Y	NA	NA	NA	NA	NA	NA	LDLRAD3	169046	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	36530791	36531124	36530883	Y	NA	TRAF6	NA	NA	NA	NA	TRAF6	969	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	44306158	44306224	44306191	Y	ALX4	NA	NA	NA	NA	NA	EXT2	191059	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	45201958	45202605	45202216	Y	NA	NA	NA	NA	NA	NA	TP53I11	231118	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr11	46258702	46259233	46258865	Y	DGKZ	CREB3L1	PHF21A,DGKZ,CREB3L1,MDK	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CREB3L1	37979	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	46264726	46265198	46265009	Y	NA	CREB3L1	DGKZ,PHF21A,CREB3L1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CREB3L1	32014	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	46412719	46412930	46412758	Y	NA	MDK	NA	NA	NA	NA	MDK	12413	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	47573563	47574025	47573747	Y	NR1H3,SPI1,PTPRJ,CELF1,CELF1,CELF1	NDUFS3,PTPMT1,CELF1,KBTBD4	NA	NA	NA	NA	NDUFS3	10863	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	47787265	47787534	47787400	Y	SPI1,CELF1,CELF1,CELF1,PTPRJ,FNBP4	FNBP4	NA	NA	NA	NA	FNBP4	270	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	47844695	47845036	47844861	Y	NA	NUP160	NA	NA	NA	NA	NUP160	23071	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	60753567	60754105	60753691	Y	SDHAF2,CD5,CD6	SLC15A3	NA	NA	NA	NA	SLC15A3	35565	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	61484059	61484366	61484213	Y	CYBASC3,CPSF7,CPSF7,SDHAF2,DAGLA,FTH1	DAGLA	NA	NA	NA	NA	DAGLA	38154	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	62320979	62321244	62321106	Y	NA	RP11-864I4.4,AHNAK,EEF1G,MIR3654,TUT1,MTA2	NA	NA	NA	NA	AHNAK	463	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	62321348	62321821	62321541	Y	NA	RP11-864I4.4,EEF1G,MIR3654,TUT1,MTA2	NA	NA	NA	NA	AHNAK	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	63744435	63744483	63744459	Y	KCNK4	NAA40,COX8A,AP000721.4,OTUB1	NA	NA	NA	NA	AP000721.4	4343	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	64125464	64125650	64125510	Y	MARK2,NUDT22,FKBP2,PPP1R14B,PLCB3,BAD,ESRRA,TRMT112,PRDX5,CDC42BPG,RPS6KA4	TRMT112,PRDX5,RPS6KA4	NA	NA	NA	NA	RPS6KA4	844	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65042835	65043130	65042858	Y	EHD1,C11orf85,CDC42EP2	POLA2,CDC42EP2	NA	NA	NA	NA	POLA2	15602	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65076655	65076852	65076688	Y	EHD1,BATF2,FAU,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,CDC42EP2	POLA2,CDC42EP2,DPF2,TIGD3	NA	NA	NA	NA	CDC42EP2	3437	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	65185589	65187086	65186338	Y	NA	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	1159	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65187297	65188198	65187553	Y	BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	47	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	65238917	65239096	65239037	Y	CDC42EP2,RELA,EHBP1L1,DKFZp761E198	AP000769.1,MALAT1	TIGD3	K562	ChIA-PET	22265404	AP000769.1	18189	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65239550	65239870	65239751	Y	BATF2,FAU,CDC42EP2,KCNK7,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1	TIGD3,SCYL1	K562	ChIA-PET	22265404	AP000769.1	18822	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	65244638	65245303	65245021	Y	BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1,SCYL1	SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MALAT1	17930	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	65248969	65249218	65249208	Y	SNX32	AP000769.1,MALAT1,SCYL1	FRMD8,SLC25A45,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	IMR90	Hi-C	24141950	MALAT1	14015	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65249962	65250245	65250146	Y	NA	AP000769.1,MALAT1,SCYL1	FRMD8,SLC25A45,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	IMR90	Hi-C	24141950	MALAT1	12988	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65256318	65257363	65256982	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,FRMD8,NEAT1,MIR612,POLA2,DPF2,SLC25A45,TIGD3,SCYL1	IMR90	Hi-C	24141950	MALAT1	5870	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	65261229	65261625	65261527	Y	CDC42EP2	AP000769.1,MALAT1,SCYL1	MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1	IMR90	Hi-C	24141950	MALAT1	1608	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	65264635	65265953	65265057	Y	NA	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	1402	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr11	65666492	65667203	65666864	Y	RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B	MUS81,CFL1,EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1	NA	NA	NA	NA	FOSL1	448	CAGE	RERF-LC-AI	hg19	FANTOM5	5.66010827263398
chr11	65670692	65670945	65670845	Y	RIN1,BRMS1,SCYL1,SSSCA1,PCNXL3,CFL1,MUS81,FIBP,CCDC85B,YIF1A,SF3B2,RAB1B,FOSL1,DRAP1,C11orf68,BANF1	MUS81,CFL1,EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1	NA	NA	NA	NA	FOSL1	4648	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	65678943	65679154	65679019	Y	RIN1,BRMS1,SCYL1,SSSCA1,CFL1,FIBP,CCDC85B,YIF1A,SF3B2,RAB1B,KLC2,FOSL1,SART1,DRAP1,C11orf68,BANF1	EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1	NA	NA	NA	NA	C11orf68	5434	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr11	65683105	65683625	65683322	Y	NA	EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1	NA	NA	NA	NA	C11orf68	963	CAGE	RERF-LC-AI	hg19	FANTOM5	11.320216545268
chr11	65782974	65783337	65783107	Y	FOSL1	BANF1,EIF1AD,CST6,CATSPER1,SF3B2	NA	NA	NA	NA	CST6	5662	CAGE	RERF-LC-AI	hg19	FANTOM5	8.49016240895097
chr11	67138852	67139479	67139267	Y	NA	POLD4,RAD9A,PPP1CA	NA	NA	NA	NA	AP003419.11	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	67139742	67140272	67140082	Y	NA	POLD4,AP003419.11,RAD9A,PPP1CA	NA	NA	NA	NA	AP003419.11	687	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	68110280	68110464	68110374	Y	NA	LRP5	PPP6R3	IMR90	Hi-C	24141950	LRP5	32203	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	68147876	68148306	68148095	Y	NA	NA	NA	NA	NA	NA	LRP5	69799	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	68611298	68611611	68611498	Y	NA	CPT1A	NA	NA	NA	NA	CPT1A	1420	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	68778534	68778789	68778694	Y	MRGPRF	MRGPRF,TPCN2	NA	NA	NA	NA	MRGPRF	88	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	68924761	68925032	68924956	Y	TPCN2	NA	ORAOV1,CCND1,MYEOV	IMR90	Hi-C	24141950	TPCN2	110396	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	68981040	68981260	68981150	Y	NA	NA	ORAOV1,MYEOV,CCND1,FGF19	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MYEOV	78345	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	69069179	69069344	69069260	Y	TPCN2	MYEOV	NA	NA	NA	NA	MYEOV	9574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	69235389	69235576	69235517	Y	NA	NA	MYEOV,ORAOV1,CCND1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MYEOV	175784	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	69451342	69451588	69451394	Y	NA	CCND1,ORAOV1	NA	NA	NA	NA	CCND1	2267	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	69795546	69795838	69795683	Y	ANO1	NA	ANO1,ORAOV1,FGF4,FADD	IMR90	Hi-C	24141950	FADD	251431	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	70090856	70091139	70091025	Y	NA	FADD,PPFIA1	PPFIA1,FADD	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PPFIA1	23667	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	70159213	70159451	70159301	Y	PPFIA1	PPFIA1	NA	NA	NA	NA	PPFIA1	44407	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	70245269	70246141	70245676	Y	ANO1,FADD,PPFIA1,CTTN	CTTN,AP000487.5	NA	NA	NA	NA	AP000487.5	2675	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr11	72003135	72003262	72003223	Y	NA	NA	NA	NA	NA	NA	INPPL1	70390	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	73088357	73088912	73088439	Y	NA	RELT	NA	NA	NA	NA	RELT	3048	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	74393461	74393664	74393563	Y	NA	NA	NA	NA	NA	NA	RP11-864N7.2	61495	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	74465903	74466299	74466070	Y	POLD3,RNF169	RP11-864N7.2,RNF169	XRRA1	IMR90	Hi-C	24141950	RNF169	7990	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr11	74565092	74565468	74565281	Y	NA	NA	NA	NA	NA	NA	XRRA1	92777	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	75946013	75946323	75946187	Y	NA	WNT11	C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WNT11	26233	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	78051007	78051295	78051151	Y	NA	NA	NA	NA	NA	NA	GAB2	76099	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	78091808	78092073	78091933	Y	GAB2,GAB2	GAB2	NA	NA	NA	NA	GAB2	35321	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	78134473	78134617	78134544	Y	GAB2,GAB2	GAB2	NA	NA	NA	NA	GAB2	7079	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	83278002	83278167	83278160	Y	NA	NA	NA	NA	NA	NA	CCDC90B	282552	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	86184196	86184398	86184363	Y	NA	NA	NA	NA	NA	NA	C11orf73	172943	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	86399785	86399941	86399864	Y	NA	ME3	ME3,PRSS23	IMR90	Hi-C	24141950	ME3	18107	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	86447030	86447398	86447213	Y	NA	NA	PRSS23,ME3,CCDC81	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PRSS23	52703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	87165029	87165072	87165051	Y	NA	NA	GRM5	IMR90	Hi-C	24141950	TMEM135	418143	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr11	88071526	88071793	88071707	Y	NA	CTSC	NA	NA	NA	NA	CTSC	2571	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	93446176	93446355	93446266	Y	NA	SCARNA9,C11orf54	NA	NA	NA	NA	SCARNA9	6324	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	95557234	95557451	95557366	Y	NA	CEP57,FAM76B	NA	NA	NA	NA	FAM76B	35661	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	95745158	95745721	95745455	Y	FAM76B,MAML2,CCDC82	NA	NA	NA	NA	NA	MTMR2	88679	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	95982466	95982894	95982863	Y	NA	NA	NA	NA	NA	NA	MAML2	91450	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	102297400	102297813	102297636	Y	BIRC3,BIRC2,MMP20,TMEM123	TMEM123	BIRC2	IMR90	Hi-C	24141950	TMEM123	41302	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	103281581	103281752	103281672	Y	NA	NA	NA	NA	NA	NA	DYNC2H1	303421	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	109870773	109871141	109870859	Y	FDX1,ZC3H12C	NA	ZC3H12C	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZC3H12C	90946	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	111692318	111692670	111692505	Y	NA	NA	PPP2R1B	IMR90	Hi-C	24141950	C11orf1	54989	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	114037766	114038216	114037805	Y	NA	NA	NA	NA	NA	NA	NNMT	88293	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	114162155	114162496	114162247	Y	NA	NNMT	NA	NA	NA	NA	NNMT	35646	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	117931677	117931995	117931810	Y	IL10RA	NA	NA	NA	NA	NA	FXYD6	185476	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	118782911	118783378	118783221	Y	SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84	BCL9L	NA	NA	NA	NA	BCL9L	10939	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr11	118800245	118800827	118800413	Y	MLL,DDX6,VPS11,RPS25,CBL,C2CD2L,CXCR5,CXCR5,CCDC84	BCL9L	NA	NA	NA	NA	BCL9L	5928	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	122049218	122049681	122049522	Y	NA	MIRLET7A2	NA	NA	NA	NA	MIRLET7A2	33917	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	122059856	122060218	122060121	Y	NA	MIRLET7A2	NA	NA	NA	NA	MIRLET7A2	44555	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	122608190	122608588	122608260	Y	NA	NA	NA	NA	NA	NA	UBASH3B	83807	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	123234100	123234303	123234163	Y	NA	NA	NA	NA	NA	NA	LINC01059	88803	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	123957354	123957540	123957459	Y	SCN3B,OR6M1,TMEM225,OR8D1,VWA5A	VWA5A	OR8G1	IMR90	Hi-C	24141950	VWA5A	26529	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	123984777	123984974	123984888	Y	VWA5A	VWA5A	NA	NA	NA	NA	VWA5A	708	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	124638889	124639135	124639012	Y	NA	NRGN,RP11-677M14.3,ESAM	NA	NA	NA	NA	ESAM	8703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	125983623	125983738	125983673	Y	CDON	NAP1L1P1	HYLS1	IMR90	Hi-C	24141950	NAP1L1P1	48189	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	126515042	126515485	126515173	Y	NA	NA	NA	NA	NA	NA	ST3GAL4	291507	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr11	126517645	126518030	126517735	Y	NA	NA	NA	NA	NA	NA	ST3GAL4	294110	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	126780606	126781009	126780811	Y	NA	NA	NA	NA	NA	NA	KIRREL3	90346	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	127391525	127391650	127391576	Y	NA	NA	NA	NA	NA	NA	KIRREL3	520170	CAGE	RERF-LC-AI	hg19	FANTOM5	11.7245099933132
chr11	128348079	128348401	128348240	Y	NA	NA	NA	NA	NA	NA	ETS1	107052	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	128376891	128377234	128377096	Y	ETS1	NA	NA	NA	NA	NA	ETS1	78219	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr11	130392180	130392594	130392285	Y	NA	NA	SNX19,ADAMTS15	IMR90	Hi-C	24141950	ADAMTS15	75311	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr11	131288211	131288548	131288380	Y	NA	NTM	NA	NA	NA	NA	NTM	49838	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	131417840	131417998	131417919	Y	NTM	NA	NA	NA	NA	NA	NTM	179467	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	132637704	132638094	132637706	Y	OPCML	NA	NA	NA	NA	NA	IGSF9B	1186786	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr11	134688539	134688830	134688760	Y	NA	NA	NA	NA	NA	NA	GLB1L2	488771	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	680187	680377	680237	Y	NA	NA	NA	NA	NA	NA	RP11-218M22.1	57680	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	1208361	1208617	1208550	Y	NA	NA	NA	NA	NA	NA	ERC1	110686	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	1770869	1771337	1771069	Y	LRTM2,ADIPOR2	ADIPOR2	NA	NA	NA	NA	ADIPOR2	24403	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	3326549	3326840	3326665	Y	TSPAN9	RP11-543P15.1	NA	NA	NA	NA	RP11-543P15.1	7453	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	3563518	3563854	3563701	Y	NA	NA	NA	NA	NA	NA	RP11-543P15.1	244422	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	3913952	3914004	3913978	Y	NA	EFCAB4B	NA	NA	NA	NA	EFCAB4B	41967	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	3948349	3948613	3948479	Y	NA	PARP11	NA	NA	NA	NA	PARP11	31995	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	4225746	4226120	4225854	Y	NA	NA	CCND2	IMR90	Hi-C	24141950	CCND2	154818	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	5198025	5198415	5198167	Y	NA	NA	NTF3,KCNA6,ANO2,VWF	IMR90	Hi-C	24141950	GALNT8	370518	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	5542952	5543350	5543174	Y	NTF3,NTF3	NA	NA	NA	NA	NA	GALNT8	715445	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	5915509	5915755	5915702	Y	NA	NA	NA	NA	NA	NA	CD9	391126	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	5918139	5918518	5918331	Y	NA	NA	NA	NA	NA	NA	CD9	388363	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	6288535	6288780	6288632	Y	CD9,VWF	CD9	VWF,PLEKHG6,CD9	IMR90	Hi-C	24141950	CD9	18101	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	6325035	6325634	6325452	Y	NA	CD9	NA	NA	NA	NA	CD9	18154	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	6717352	6717716	6717682	Y	SCNN1A,SCNN1A,PTPN6,LRRC23,ATN1,CHD4,ACRBP	NOP2,CHD4	NA	NA	NA	NA	CHD4	2710	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	7000184	7000641	7000294	Y	PEX5,VAMP1,ACRBP,CD4,CD4,PTPN6	CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2,ENO2,ATN1,C12orf57	NA	NA	NA	NA	SPSB2	3662	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	7034730	7034838	7034794	Y	ACSM4,PTMS,PHB2,PHB2,EMG1,USP5,USP5,SPSB2,SPSB2,ATN1	SPSB2,ENO2,ATN1,C12orf57,EMG1,PHB2	NA	NA	NA	NA	ATN1	3104	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	8123169	8123746	8123395	Y	CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3	SLC2A3	SLC2A3,FOXJ2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC2A3	36298	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	13025126	13025347	13025203	Y	NA	RPL13AP20,GPRC5A,MIR614	NA	NA	NA	NA	RPL13AP20	1086	CAGE	RERF-LC-AI	hg19	FANTOM5	16.9803248179019
chr12	13124934	13124993	13124963	Y	NA	RP11-392P7.6,HTR7P1,HEBP1	GPRC5D	IMR90	Hi-C	24141950	HTR7P1	25819	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	13253893	13254547	13254171	Y	CDKN1B,EMP1	NA	NA	NA	NA	NA	KIAA1467	58675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	15167625	15167774	15167700	Y	NA	NA	MGP	IMR90	Hi-C	24141950	ARHGDIB	54963	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	15899366	15899730	15899546	Y	PTPRO	NA	NA	NA	NA	NA	EPS8	133533	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	18511225	18511610	18511392	Y	NA	NA	NA	NA	NA	NA	PLEKHA5	769038	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	19496981	19496995	19496989	Y	NA	NA	NA	NA	NA	NA	AEBP2	57984	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	20975224	20975562	20975349	Y	NA	NA	NA	NA	NA	NA	PYROXD1	612987	CAGE	RERF-LC-AI	hg19	FANTOM5	6.87298861676983
chr12	25539082	25539407	25539207	Y	NA	NA	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KRAS	137212	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	31902136	31902566	31902240	Y	C12orf35,AMN1,H3F3C	AMN1,RP11-467L13.5,H3F3C	AMN1	K562	ChIA-PET	22265404	RP11-467L13.5	3085	CAGE	RERF-LC-AI	hg19	FANTOM5	3.63864103240756
chr12	39104065	39104215	39104143	Y	CPNE8	NA	NA	NA	NA	NA	CPNE8	195017	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	42825856	42826146	42826103	Y	YAF2,YAF2,YAF2	NA	NA	NA	NA	NA	ZCRB1	107936	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	44522730	44522871	44522801	Y	NA	NA	NA	NA	NA	NA	TMEM117	294960	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	46888080	46888552	46888358	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	112618	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	46917975	46918280	46918143	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1,AMIGO2	IMR90	Hi-C	24141950	RP11-96H19.1	142513	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr12	46947043	46947401	46947166	Y	SLC38A2	NA	SLC38A2	IMR90	Hi-C	24141950	RP11-96H19.1	171581	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr12	46956686	46956942	46956800	Y	SLC38A2	NA	SLC38A2	IMR90	Hi-C	24141950	RP11-96H19.1	181224	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	47058808	47059020	47058972	Y	SLC38A2	NA	SLC38A2,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	283346	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	47474423	47475249	47474825	Y	NA	AMIGO2	NA	NA	NA	NA	AMIGO2	2689	CAGE	RERF-LC-AI	hg19	FANTOM5	4.44722792849813
chr12	47482441	47482676	47482559	Y	NA	AMIGO2	AMIGO2	K562	ChIA-PET	22265404	AMIGO2	10707	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	47596373	47596459	47596419	Y	NA	PCED1B-AS1	NA	NA	NA	NA	PCED1B-AS1	11780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	47661403	47661671	47661594	Y	NA	NA	FAM113B,AMIGO2	IMR90	Hi-C	24141950	PCED1B-AS1	53164	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	47671815	47672221	47672059	Y	NA	NA	AMIGO2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PCED1B-AS1	63576	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	47701468	47701752	47701723	Y	NA	NA	AMIGO2,MIR4698,LOC100233209,FAM113B	IMR90	Hi-C	24141950	PCED1B-AS1	93229	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	49371065	49371287	49371156	Y	NA	ARF3,RP11-386G11.5,PRKAG1	NA	NA	NA	NA	RP11-386G11.5	18863	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	50911573	50911988	50911666	Y	SLC11A2,DIP2B	DIP2B	NA	NA	NA	NA	DIP2B	14805	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	51793762	51794009	51793886	Y	METTL7A,HIGD1C,SCN8A	SLC4A8,GALNT6	NA	NA	NA	NA	GALNT6	9111	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52242460	52242886	52242778	Y	SLC4A8,ANKRD33	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	100565	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	52419301	52419935	52419633	Y	NR4A1,GRASP,NR4A1	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	4685	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52540237	52540565	52540533	Y	NA	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	43219	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52540964	52541526	52541224	Y	KRT80,KRT7,KRT6A,KRT5,NR4A1,C12orf44	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	42258	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52542210	52542726	52542513	Y	KRT80,KRT7,KRT6B,KRT6A,KRT5,C12orf44	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	41058	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	52557711	52558022	52557822	Y	NA	KRT80	NA	NA	NA	NA	KRT80	25762	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52596776	52597514	52597151	Y	NR4A1	KRT80,KRT7	NA	NA	NA	NA	KRT80	12992	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52674655	52675081	52674843	Y	C12orf44,KRT80,KRT7	NA	NA	NA	NA	NA	KRT7	50351	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	52888449	52888608	52888529	Y	C12orf44,KRT6A,KRT5	NA	NA	NA	NA	NA	KRT7	264145	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	53267781	53268340	53268093	Y	PFDN5	NA	KRT18,KRT8,LOC283403,EIF4B,KRT80,LOC283404	MCF7	ChIA-PET	22265404	KRT18	72315	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	53284889	53285178	53285173	Y	ZNF740,SP1,KRT8,KRT18,KRT18	NA	NA	NA	NA	NA	KRT18	55477	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	53359181	53359363	53359294	Y	PCBP2,AMHR2,KRT8,KRT18,KRT18	KRT18,KRT8,EIF4B	NA	NA	NA	NA	KRT8	17443	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	54133160	54133497	54133297	Y	ATF7,ATP5G2	CALCOCO1	ATF7,ATP5G2,CALCOCO1,CBX5	IMR90	Hi-C	24141950	CALCOCO1	13631	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	54391907	54392298	54392098	Y	ATP5G2,HOXC8,HOXC6,HOXC4,HOXC12,HOXC10,HOXC9	HOTAIR,HOXC8	NA	NA	NA	NA	HOXC8	8534	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	54610828	54611089	54611007	Y	NA	SMUG1	NA	NA	NA	NA	SMUG1	30050	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	55807914	55808439	55808095	Y	NA	NA	NA	NA	NA	NA	METTL7B	264891	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	56219844	56220081	56219962	Y	OR6C3	SARNP,ORMDL2,TMEM198B,DNAJC14,MMP19	NA	NA	NA	NA	TMEM198B	1448	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	57028610	57029302	57028864	Y	NA	BAZ2A,ATP5B	NA	NA	NA	NA	BAZ2A	10	CAGE	RERF-LC-AI	hg19	FANTOM5	3.63864103240756
chr12	58238225	58238735	58238639	Y	AGAP2,TSPAN31,CDK4,METTL1,METTL21B,TSFM,XRCC6BP1,CTDSP2	RP11-620J15.1	NA	NA	NA	NA	CTDSP2	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	63118880	63119001	63118911	Y	NA	NA	NA	NA	NA	NA	RP11-631N16.2	124348	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	64312639	64312950	64312683	Y	SRGAP1	NA	NA	NA	NA	NA	SRGAP1	76566	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	65930655	65931175	65930934	Y	HMGA2	NA	MSRB3,HMGA2,RPSAP52	IMR90	Hi-C	24141950	RP11-221N13.3	63474	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	66004084	66004433	66004259	Y	NA	RP11-221N13.3	RPSAP52,HMGA2,MSRB3	IMR90	Hi-C	24141950	RP11-221N13.3	9435	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	66042799	66043321	66043056	Y	NA	RP11-221N13.3	RPSAP52,HMGA2,MSRB3	IMR90	Hi-C	24141950	RP11-221N13.3	48150	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	66135126	66135637	66135353	Y	HMGA2	NA	NA	NA	NA	NA	HMGA2	80274	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	66216365	66216749	66216512	Y	HMGA2	HMGA2	NA	NA	NA	NA	HMGA2	454	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	66285844	66286273	66285967	Y	IRAK3	NA	NA	NA	NA	NA	RP11-366L20.3	53986	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	66628292	66629290	66628922	Y	TMBIM4,IRAK3,HELB	IRAK3,RBMS1P1	NA	NA	NA	NA	RBMS1P1	1278	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	69036661	69037118	69036873	Y	NA	RAP1B,RP11-254B13.3,NUP107	NA	NA	NA	NA	RP11-254B13.3	1888	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr12	71039604	71039990	71039715	Y	NA	NA	NA	NA	NA	NA	RP11-611E13.2	404464	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	72125908	72126059	72125950	Y	NA	TMEM19,RAB21	NA	NA	NA	NA	RAB21	20595	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	76405800	76405899	76405843	Y	NA	PHLDA1	NA	NA	NA	NA	PHLDA1	19813	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	77377580	77377874	77377727	Y	NA	NA	ZDHHC17	IMR90	Hi-C	24141950	E2F7	79486	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	77426192	77426447	77426357	Y	OSBPL8	E2F7	NA	NA	NA	NA	E2F7	30913	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	77456593	77456922	77456786	Y	E2F7	E2F7	NA	NA	NA	NA	E2F7	438	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	89747699	89748479	89748073	Y	NA	DUSP6	NA	NA	NA	NA	DUSP6	2651	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	90257323	90257921	90257575	Y	POC1B	NA	LOC338758	IMR90	Hi-C	24141950	ATP2B1	156246	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	93277124	93277496	93277306	Y	NA	EEA1	NA	NA	NA	NA	EEA1	43611	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	94493473	94493774	94493548	Y	NA	PLXNC1	CRADD,LOC144481,SOCS2,MRPL42,UBE2N	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PLXNC1	46725	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	94678246	94678308	94678278	Y	PLXNC1,TMCC3	NA	NA	NA	NA	NA	PLXNC1	137747	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	95199817	95200100	95199987	Y	VEZT	NA	TMCC3,PLXNC1	IMR90	Hi-C	24141950	TMCC3	157479	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	96589359	96589977	96589479	Y	LTA4H,ELK3	ELK3	NA	NA	NA	NA	ELK3	3199	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	100518805	100519127	100519119	Y	NA	UHRF1BP1L	NA	NA	NA	NA	UHRF1BP1L	15499	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	101192574	101192822	101192700	Y	NA	NA	NA	NA	NA	NA	RP11-575G13.2	222052	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	104301376	104301628	104301530	Y	NA	HSP90B1	NA	NA	NA	NA	HSP90B1	20257	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	104658660	104659046	104658853	Y	NA	RPL18AP3,RP11-818F20.5	NA	NA	NA	NA	RPL18AP3	1604	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	108877904	108878160	108878033	Y	SSH1,SELPLG,SELPLG	FICD	NA	NA	NA	NA	FICD	28802	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	109227089	109227462	109227320	Y	NA	SSH1	NA	NA	NA	NA	SSH1	21904	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr12	109232143	109232504	109232328	Y	FICD,SELPLG,CORO1C,SSH1	SSH1	NA	NA	NA	NA	SSH1	16862	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	109249958	109250678	109250397	Y	NA	SSH1	NA	NA	NA	NA	SSH1	592	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	109570576	109570747	109570637	Y	ACACB	ALKBH2,UNG	NA	NA	NA	NA	UNG	37197	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	110867136	110867499	110867318	Y	NA	ANAPC7,HMGA1P3,ARPC3,GPN3	NA	NA	NA	NA	HMGA1P3	1049	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	111904763	111905142	111904953	Y	ALDH2,ATXN2	NA	NA	NA	NA	NA	SH2B3	63011	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	112018937	112019235	112019073	Y	NA	ATXN2	NA	NA	NA	NA	ATXN2	16245	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	113660919	113661318	113661188	Y	TPCN1	DDX54,TPCN1,IQCD	NA	NA	NA	NA	IQCD	4020	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	113938595	113938989	113938796	Y	NA	NA	RBM19,DTX1	IMR90	Hi-C	24141950	SDSL	80553	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	115354392	115354675	115354479	Y	NA	NA	TBX3	IMR90	Hi-C	24141950	RBM19	952216	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	120668258	120668871	120668569	Y	RAB35,DYNLL1,GCN1L1,RPLP0,PXN	GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1	NA	NA	NA	NA	PXN-AS1	31164	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	120672500	120673016	120672699	Y	PXN	GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1	NA	NA	NA	NA	PXN	28558	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	121019899	121020145	121020000	Y	NA	COQ5,POP5,RPL11P5	NA	NA	NA	NA	POP5	2698	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	121839154	121839422	121839290	Y	C12orf43,RHOF,KDM2B,RNF34	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	3310	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	122020162	122020238	122020212	Y	RNF34,SETD1B,ORAI1,KDM2B,KDM2B	KDM2B,ORAI1	NA	NA	NA	NA	KDM2B	3242	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	122067749	122067897	122067832	Y	ORAI1	ORAI1,MORN3	NA	NA	NA	NA	ORAI1	5294	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr12	122462417	122462775	122462615	Y	BCL7A	BCL7A,AC156455.1	NA	NA	NA	NA	BCL7A	7089	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	122908043	122908483	122908329	Y	ZCCHC8,DENR,CLIP1	CLIP1	NA	NA	NA	NA	CLIP1	2864	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	123930588	123930862	123930771	Y	RILPL2	RILPL2,SNRNP35	SNRNP35,SBNO1,SETD8,RILPL1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	SNRNP35	9326	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	124864827	124865003	124864908	Y	NA	NA	NA	NA	NA	NA	NCOR2	185132	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	124926088	124926324	124926239	Y	NA	NA	NA	NA	NA	NA	NCOR2	123811	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	125026162	125026505	125026332	Y	NA	NCOR2	NA	NA	NA	NA	NCOR2	23630	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	125027797	125027993	125027883	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	22142	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	125050856	125051375	125051213	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	721	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr12	125117108	125117622	125117163	Y	NCOR2	NA	NCOR2,ZNF664-FAM101A	IMR90	Hi-C	24141950	NCOR2	66973	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	125424077	125424667	125424516	Y	NA	UBC,DHX37	UBC	IMR90	Hi-C	24141950	UBC	24163	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	127715364	127715787	127715548	Y	NA	NA	NA	NA	NA	NA	AC079949.1	66692	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr12	132315038	132315239	132315115	Y	MMP17	MMP17	NA	NA	NA	NA	MMP17	4100	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr13	20644269	20644474	20644387	Y	ZMYM2,ZMYM2,ZMYM2	NA	NA	NA	NA	NA	GJA3	88714	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	20875474	20875741	20875720	Y	NA	NA	NA	NA	NA	NA	GJB2	110437	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	24289001	24289462	24289192	Y	PCOTH	NA	NA	NA	NA	NA	C1QTNF9B-AS1	171566	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	24697003	24697328	24697264	Y	NA	NA	SPATA13	IMR90	Hi-C	24141950	MIPEP	235445	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	24722927	24723324	24723037	Y	NA	NA	SPATA13	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MIPEP	261369	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	25115809	25116061	25115886	Y	RNF17	PARP4	NA	NA	NA	NA	PARP4	30861	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	27557231	27557465	27557334	Y	USP12,RPL21,RASL11A	NA	RASL11A,USP12,RPL21,MTIF3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP12	186568	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	27914842	27915161	27915002	Y	GSX1	NA	USP12,RPL21,RASL11A	IMR90	Hi-C	24141950	RASL11A	72378	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	28025291	28025563	28025486	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	MTIF3	2552	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	29114848	29114983	29114927	Y	NA	FLT1	FLT1,POMP,PAN3	IMR90	Hi-C	24141950	FLT1	47583	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	31151476	31151709	31151594	Y	C13orf26,USPL1	HMGB1,USPL1	TEX26-AS1,LINC00426,HMGB1	IMR90	Hi-C	24141950	HMGB1	38025	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	31583300	31583599	31583486	Y	NA	NA	USPL1,C13orf33,TEX26-AS1,KATNAL1,TEX26,ALOX5AP	IMR90	Hi-C	24141950	HSPH1	150926	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	33870395	33870537	33870466	Y	NA	NA	NA	NA	NA	NA	STARD13	52230	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr13	34116442	34117241	34116673	Y	NA	NA	NA	NA	NA	NA	STARD13	193675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr13	36918283	36918673	36918579	Y	NA	CCDC169,CCDC169-SOHLH2,SOHLH2,SPG20	NA	NA	NA	NA	SPG20	23644	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	40139698	40140018	40139948	Y	NA	LHFP	NA	NA	NA	NA	LHFP	35647	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	41624170	41624528	41624466	Y	C13orf15,NAA16,ELF1,ELF1	WBP4,ELF1	ELF1,MTRF1,NAA16	IMR90	Hi-C	24141950	WBP4	8882	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	43727960	43728297	43728107	Y	NA	NA	ENOX1,DNAJC15,CCDC122,LACC1	IMR90	Hi-C	24141950	DNAJC15	132621	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	44880536	44881091	44880742	Y	C13orf31,CCDC122,C13orf31	NA	TSC22D1,LACC1,SERP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERP2	64710	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr13	44887042	44887399	44887172	Y	C13orf31,CCDC122,C13orf31	NA	TSC22D1,SERP2	IMR90	Hi-C	24141950	SERP2	58402	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	45288309	45288506	45288432	Y	KCTD4	NA	NUFIP1,TSC22D1,TSC22D1-AS1,SERP2,LINC00330	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TSC22D1	139026	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr13	45928010	45928281	45928087	Y	NA	TPT1-AS1,TPT1	NA	NA	NA	NA	TPT1	14505	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	47128564	47128952	47128887	Y	LCP1,LRCH1	LRCH1	NA	NA	NA	NA	LRCH1	3261	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	50897882	50898235	50898046	Y	NA	RPL34P26	DLEU2,DLEU1	IMR90	Hi-C	24141950	RPL34P26	35664	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr13	51800117	51800150	51800132	Y	DLEU7,FAM124A	NA	NA	NA	NA	NA	RPS4XP16	226150	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	51902603	51902909	51902835	Y	NA	NA	DHRS12	IMR90	Hi-C	24141950	RPS4XP16	123391	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	52376068	52376210	52376139	Y	INTS6,WDFY2,DHRS12,DHRS12	DHRS12,RP11-327P2.5	NA	NA	NA	NA	DHRS12	83	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	52406665	52407091	52406817	Y	NA	DHRS12,RP11-327P2.5	NA	NA	NA	NA	RP11-327P2.5	30232	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	53765519	53765549	53765534	Y	NA	NA	NA	NA	NA	NA	SUGT1	540675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	75939887	75940324	75940051	Y	NA	NA	NA	NA	NA	NA	TBC1D4	113926	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	77166796	77167041	77166918	Y	NA	NA	NA	NA	NA	NA	KCTD12	291499	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	79232403	79232753	79232546	Y	NA	RNF219	NA	NA	NA	NA	RNF219	1089	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	80916096	80916414	80916232	Y	NA	SPRY2	NA	NA	NA	NA	SPRY2	3010	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	96366031	96366158	96366093	Y	DNAJC3	DNAJC3-AS1,DNAJC3	NA	NA	NA	NA	DNAJC3	38638	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	97908706	97909024	97908751	Y	NA	MBNL2	NA	NA	NA	NA	MBNL2	37018	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	99629306	99629403	99629355	Y	NA	NA	NA	NA	NA	NA	DOCK9	107476	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	107448247	107448283	107448269	Y	NA	NA	NA	NA	NA	NA	ATP5G1P5	134462	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	109568044	109568430	109568179	Y	NA	NA	NA	NA	NA	NA	ABHD13	699317	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	109806235	109806377	109806339	Y	NA	NA	NA	NA	NA	NA	IRS2	630538	CAGE	RERF-LC-AI	hg19	FANTOM5	4.04293448045284
chr13	109807507	109807975	109807755	Y	NA	NA	NA	NA	NA	NA	IRS2	628940	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	109808669	109809037	109808800	Y	NA	NA	NA	NA	NA	NA	IRS2	627878	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	109921804	109922211	109922051	Y	NA	NA	IRS2	IMR90	Hi-C	24141950	IRS2	514704	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr13	110426988	110427362	110427201	Y	NA	IRS2	NA	NA	NA	NA	IRS2	9553	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	110439676	110440079	110439929	Y	IRS2	IRS2	NA	NA	NA	NA	IRS2	2761	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	111176913	111177121	111177092	Y	ING1,ING1,ANKRD10,RAB20	RAB20	NA	NA	NA	NA	RAB20	34959	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	111589420	111590157	111589779	Y	NA	ANKRD10	ARHGEF7,LINC00346	IMR90	Hi-C	24141950	ANKRD10	24004	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	111607450	111607830	111607755	Y	RAB20,ING1,ING1,ANKRD10	ANKRD10	ARHGEF7,ANKRD10	IMR90	Hi-C	24141950	ANKRD10	42034	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	111863058	111863169	111863068	Y	NA	NA	NA	NA	NA	NA	ARHGEF7	98152	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	113373357	113373630	113373494	Y	ATP11A	ATP11A	NA	NA	NA	NA	ATP11A	30714	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	113806516	113806910	113806731	Y	ATP11A,CUL4A	F10	PROZ	IMR90	Hi-C	24141950	F10	31388	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	114565478	114566323	114565869	Y	GAS6,GAS6,GAS6	GAS6	NA	NA	NA	NA	GAS6	432	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	114810103	114810577	114810313	Y	NA	NA	NA	NA	NA	NA	RASA3	85509	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	114830489	114831626	114831334	Y	RASA3	NA	NA	NA	NA	NA	RASA3	64460	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr13	114881275	114881557	114881414	Y	NA	RASA3	NA	NA	NA	NA	RASA3	14529	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr13	114884280	114884926	114884814	Y	NA	RASA3	NA	NA	NA	NA	RASA3	11160	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	21150605	21151121	21150987	Y	TEP1,TMEM55B,PNP,ZNF219,ARHGEF40	RNASE4,ANG	NA	NA	NA	NA	ANG	269	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	21439863	21440073	21439999	Y	NA	METTL17	NA	NA	NA	NA	METTL17	15856	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	21540493	21540634	21540528	Y	RNASE6,TOX4,HNRNPC,ARHGEF40	ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	NDRG2	3462	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	21660147	21660368	21660311	Y	NA	NA	NA	NA	NA	NA	HNRNPC	75285	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	21684818	21685080	21685024	Y	OR10G2,OR4E2,OR10G3,RNASE8,OR5AU1	NA	NA	NA	NA	NA	HNRNPC	50573	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	23449757	23450231	23450060	Y	MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB,JUB	HAUS4,C14orf93	NA	NA	NA	NA	AJUBA	0	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	24481106	24481351	24481229	Y	NA	DHRS4L2,LRRC16B	NA	NA	NA	NA	LRRC16B	37855	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	24861663	24861718	24861669	Y	IPO4,RABGGTA,RABGGTA	NYNRIN,KHNYN,SDR39U1	NA	NA	NA	NA	NYNRIN	4274	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	31360303	31360625	31360494	Y	NA	COCH	NA	NA	NA	NA	COCH	18583	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	32953597	32954289	32954012	Y	ARHGAP5,AKAP6,NPAS3	RP11-320M16.1	NA	NA	NA	NA	RP11-320M16.1	1591	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr14	33756619	33756719	33756669	Y	NA	NA	NA	NA	NA	NA	RP11-320M16.1	804613	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	35120187	35120582	35120411	Y	SNX6,SNX6	SNX6	SNX6,BAZ1A,CFL2,PPP2R3C	IMR90	Hi-C	24141950	SNX6	22798	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	35834310	35835208	35834855	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	RP11-561B11.1,NFKBIA	PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-561B11.1	21067	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	38870563	38870760	38870662	Y	NA	NA	NA	NA	NA	NA	SEC23A	706090	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	39559553	39559840	39559693	Y	NA	SEC23A,GEMIN2	NA	NA	NA	NA	SEC23A	17010	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	50016855	50017158	50017090	Y	NA	RN7SL1,RPS29,LRR1	NA	NA	NA	NA	RN7SL1	34139	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	50329576	50329987	50329651	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	11655	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	50528497	50528810	50528555	Y	NA	RP11-58E21.3	NA	NA	NA	NA	RP11-58E21.3	22550	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	50531720	50532221	50531875	Y	RPL36AL,ARF6,C14orf182	RP11-58E21.3	NA	NA	NA	NA	RP11-58E21.3	25773	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	50926261	50926342	50926322	Y	MAP4K5,ATL1,ATL1,CDKL1	CDKL1	NA	NA	NA	NA	CDKL1	45082	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	52006399	52006758	52006578	Y	FRMD6	NA	NA	NA	NA	NA	FRMD6	52581	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	52076708	52076858	52076794	Y	NA	NA	NA	NA	NA	NA	FRMD6	122890	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	52119936	52120349	52120008	Y	FRMD6	NA	NA	NA	NA	NA	FRMD6	166118	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	53392802	53392977	53392890	Y	NA	FERMT2	NA	NA	NA	NA	FERMT2	24176	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	54833964	54834357	54834051	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	27210	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	55035984	55036343	55036300	Y	SAMD4A	SAMD4A	NA	NA	NA	NA	SAMD4A	4169	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	55173516	55173842	55173679	Y	SAMD4A	NA	NA	NA	NA	NA	SAMD4A	141701	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	55439267	55439511	55439438	Y	NA	NA	NA	NA	NA	NA	WDHD1	52312	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	55569733	55570176	55570087	Y	LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L	LGALS3	LGALS3,DLGAP5,MAPK1IP1L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	LGALS3	18652	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	55596570	55597156	55596587	Y	NA	LGALS3	NA	NA	NA	NA	LGALS3	7742	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	55921336	55921695	55921412	Y	NA	ATG14	NA	NA	NA	NA	ATG14	44760	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	56733293	56733420	56733313	Y	PELI2	NA	NA	NA	NA	NA	PELI2	150761	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	57316970	57317076	57317023	Y	OTX2	NA	NA	NA	NA	NA	EXOC5	416650	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	57378201	57378572	57378356	Y	NA	NA	NA	NA	NA	NA	EXOC5	355154	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	59216036	59216189	59216096	Y	ARID4A	RP11-112J1.1	DACT1	IMR90	Hi-C	24141950	RP11-112J1.1	43183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	59949393	59949731	59949550	Y	C14orf149	JKAMP	NA	NA	NA	NA	JKAMP	232	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	60214885	60214948	60214918	Y	RTN1	NA	NA	NA	NA	NA	JKAMP	265724	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	61570265	61570959	61570637	Y	SLC38A6	NA	NA	NA	NA	NA	PRKCH	81318	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	61985151	61985397	61985317	Y	HIF1A	NA	NA	NA	NA	NA	HIF1A	174834	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	63088627	63088999	63088813	Y	NA	NA	RHOJ	IMR90	Hi-C	24141950	RHOJ	579833	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	65169606	65170310	65170032	Y	NA	PLEKHG3	NA	NA	NA	NA	PLEKHG3	786	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	67763359	67763655	67763501	Y	NA	NA	NA	NA	NA	NA	MPP5	57533	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	68161499	68161767	68161616	Y	PLEK2	VTI1B,RDH11	NA	NA	NA	NA	RDH11	968	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	68555311	68555805	68555391	Y	NA	NA	NA	NA	NA	NA	RAD51B	270815	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	68604521	68604895	68604639	Y	NA	NA	NA	NA	NA	NA	PPIAP6	282018	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	69155852	69156106	69155979	Y	NA	NA	RAD51B,ZFP36L1	IMR90	Hi-C	24141950	ZFP36L1	105084	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	69404659	69405002	69404945	Y	NA	ACTN1	NA	NA	NA	NA	ACTN1	39155	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	69618210	69618757	69618360	Y	NA	DCAF5,EXD2	NA	NA	NA	NA	DCAF5	343	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	70020113	70020453	70020282	Y	NA	NA	NA	NA	NA	NA	KIAA0247	55860	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	74741846	74742137	74741995	Y	FCF1	ABCD4	NA	NA	NA	NA	ABCD4	25622	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	74949377	74949710	74949544	Y	NA	MIR4709,ISCA2,NPC2	NA	NA	NA	NA	MIR4709	4470	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	75491919	75492089	75492033	Y	NA	EIF2B2,MLH3,ACYP1	NA	NA	NA	NA	MLH3	24146	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	76843326	76843356	76843341	Y	NA	NA	NA	NA	NA	NA	RP11-187O7.1	256648	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	77431067	77431579	77431238	Y	NA	NA	IRF2BPL	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IRF2BPL	61455	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	80052385	80052697	80052460	Y	NA	NA	NA	NA	NA	NA	DIO2	799403	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	81484958	81485153	81484991	Y	TSHR	NA	NA	NA	NA	NA	CEP128	61097	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	81685513	81686063	81685724	Y	GTF2A1,GTF2A1	DYNLL1P1	NA	NA	NA	NA	GTF2A1	0	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr14	81867255	81867616	81867435	Y	GTF2A1,GTF2A1,STON2	STON2	NA	NA	NA	NA	STON2	33193	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	86066316	86066619	86066414	Y	NA	NA	NA	NA	NA	NA	FLRT2	71828	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	87930298	87930498	87930398	Y	NA	NA	NA	NA	NA	NA	GALC	527511	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	91683304	91683542	91683359	Y	NA	NA	NA	NA	NA	NA	RPS6KA5	158324	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	92972797	92972893	92972844	Y	SLC24A4,SLC24A4,RIN3	RIN3	NA	NA	NA	NA	RIN3	5225	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	95677984	95678067	95678026	Y	NA	NA	NA	NA	NA	NA	DICER1	55637	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	95758765	95759186	95759057	Y	CLMN	CLMN	NA	NA	NA	NA	CLMN	25057	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	99700697	99700801	99700734	Y	BCL11B	BCL11B	NA	NA	NA	NA	BCL11B	35060	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	99735950	99736476	99736276	Y	BCL11B	BCL11B	NA	NA	NA	NA	BCL11B	89	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	99739493	99739630	99739557	Y	BCL11B	BCL11B	NA	NA	NA	NA	BCL11B	3632	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	100040610	100041006	100040947	Y	SETD3,CCDC85C	CCDC85C	NA	NA	NA	NA	CCDC85C	27357	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	100068632	100068970	100068687	Y	NA	CCDC85C,HHIPL1	NA	NA	NA	NA	CCDC85C	269	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	100233292	100233532	100233412	Y	NA	EML1	EML1,CYP46A1	IMR90	Hi-C	24141950	EML1	31262	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	100415478	100415881	100415722	Y	NA	NA	NA	NA	NA	NA	EML1	213448	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	101159258	101159870	101159708	Y	NA	NA	NA	NA	NA	NA	WDR25	318503	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	101370822	101370975	101370899	Y	BEGAIN,RTL1	NA	NA	NA	NA	NA	WDR25	530067	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	102414226	102414964	102414565	Y	NA	DYNC1H1	NA	NA	NA	NA	DYNC1H1	13901	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	103577206	103577606	103577492	Y	C14orf153	TNFAIP2	NA	NA	NA	NA	TNFAIP2	10173	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	103673427	103673966	103673589	Y	CDC42BPB	NA	LOC100131366,CDC42BPB,EXOC3L4,EIF5,TNFAIP2,MARK3,RCOR1	IMR90	Hi-C	24141950	TNFAIP2	85648	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	103954462	103954719	103954539	Y	MARK3,KLC1	CKB,TRMT61A	NA	NA	NA	NA	CKB	32729	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	104016804	104017118	104016961	Y	CKB	CKB,TRMT61A,KLC1,BAG5,APOPT1,RNU4-68P	NA	NA	NA	NA	KLC1	9115	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	104483678	104483886	104483733	Y	ZFYVE21	NA	NA	NA	NA	NA	C14orf2	91072	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	105144100	105144955	105144117	Y	GPR132,AKT1	RP11-982M15.6,INF2	NA	NA	NA	NA	RP11-982M15.6	528	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	105491233	105491512	105491453	Y	NA	AHNAK2,CDCA4	NA	NA	NA	NA	CDCA4	5748	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr14	105493379	105493756	105493698	Y	NA	CDCA4	NA	NA	NA	NA	CDCA4	7894	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	105500263	105500628	105500453	Y	NA	CDCA4	NA	NA	NA	NA	CDCA4	14778	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	105662688	105662867	105662792	Y	NA	JAG2,NUDT14,BTBD6	NA	NA	NA	NA	NUDT14	17028	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr14	105948139	105949025	105948432	Y	NA	CRIP2,CRIP1,C14orf80	NA	NA	NA	NA	CRIP1	2511	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr14	107252931	107253417	107253022	Y	NA	NA	NA	NA	NA	NA	C14orf80	1298739	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	20500145	20500389	20500187	Y	NA	NA	NA	NA	NA	NA	TUBGCP5	2331006	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	26218277	26218446	26218362	Y	NA	NA	NA	NA	NA	NA	ATP10A	109960	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	29526240	29526874	29526776	Y	NA	NDNL2	NA	NA	NA	NA	NDNL2	33159	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	30315678	30315833	30315756	Y	NA	NA	NA	NA	NA	NA	TJP1	56610	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	31733081	31733438	31733352	Y	MTMR10,KLF13	NA	KLF13,OTUD7A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF13	116023	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	33162710	33163027	33162926	Y	NA	NA	NA	NA	NA	NA	SCG5	230833	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	33472781	33472968	33472835	Y	NA	NA	NA	NA	NA	NA	SCG5	540904	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	33746972	33747043	33747010	Y	NA	NA	NA	NA	NA	NA	AVEN	582334	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	34807090	34807442	34807248	Y	NA	NA	NA	NA	NA	NA	GOLGA8B	71262	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	37175924	37176266	37175984	Y	C15orf41,MEIS2,MEIS2,MEIS2,MEIS2	NA	NA	NA	NA	NA	CSNK1A1P1	67264	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	39561378	39561942	39561743	Y	THBS1	NA	NA	NA	NA	NA	RP11-624L4.1	155454	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	40179429	40179904	40179805	Y	NA	GPR176,EIF2AK4	FSIP1	IMR90	Hi-C	24141950	GPR176	31189	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	40210900	40211252	40211013	Y	GPR176	EIF2AK4	FSIP1	IMR90	Hi-C	24141950	GPR176	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	40373777	40374114	40374053	Y	FSIP1,BAHD1,BMF,BMF,BMF	SRP14,BMF	NA	NA	NA	NA	BMF	24979	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	41456018	41456111	41456065	Y	NA	INO80	NA	NA	NA	NA	INO80	49466	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	41953918	41954236	41954127	Y	EHD4,MGA	MGA	MAPKBP1	IMR90	Hi-C	24141950	MGA	42496	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	42213328	42213713	42213448	Y	NA	EHD4	NA	NA	NA	NA	EHD4	49063	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	42232566	42232958	42232887	Y	EHD4	EHD4	SPTBN5	IMR90	Hi-C	24141950	EHD4	29818	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	45016631	45017046	45016657	Y	SPG11,B2M,TRIM69	PATL2,B2M,TRIM69	NA	NA	NA	NA	TRIM69	2140	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	45746745	45747578	45747238	Y	SPATA5L1,C15orf48,SQRDL,PLDN	C15orf48	NA	NA	NA	NA	C15orf48	26018	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	45748469	45749175	45748989	Y	SPATA5L1,C15orf48,SQRDL,PLDN	C15orf48	NA	NA	NA	NA	C15orf48	27742	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	46881345	46881677	46881639	Y	NA	NA	NA	NA	NA	NA	SEMA6D	592621	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr15	48104672	48105061	48104769	Y	NA	NA	SEMA6D	IMR90	Hi-C	24141950	CTD-2270N23.1	83540	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	52273738	52273979	52273778	Y	NA	MAPK6,LEO1	MAPK6,GNB5,MYO5C,BCL2L10	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	LEO1	11735	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	52385766	52385957	52385877	Y	DMXL2,MAPK6	CTD-2184D3.1,BCL2L10	NA	NA	NA	NA	CTD-2184D3.1	274	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr15	59158498	59158653	59158597	Y	ADAM10,RNF111,SLTM	RNF111	NA	NA	NA	NA	RNF111	3124	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr15	60881604	60881753	60881652	Y	RORA	NA	NA	NA	NA	NA	RP11-219B17.1	112227	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	61520020	61520614	61520340	Y	RORA	RORA	NA	NA	NA	NA	RORA	502	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	62499952	62500233	62500097	Y	NA	C2CD4B	NA	NA	NA	NA	C2CD4B	44470	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	63142999	63143362	63143082	Y	NA	NA	NA	NA	NA	NA	RP11-244F12.1	100010	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	63439577	63439949	63439764	Y	NA	LACTB,RPS27L,RAB8B	NA	NA	NA	NA	RPS27L	8271	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	63795379	63795825	63795543	Y	NA	USP3	NA	NA	NA	NA	USP3	586	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	65244919	65245418	65244949	Y	ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16,ANKDD1A	ANKDD1A,SPG21	NA	NA	NA	NA	SPG21	35230	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	65245420	65245827	65245459	Y	ZNF609,OAZ2,PLEKHO2,PARP16	ANKDD1A,SPG21	NA	NA	NA	NA	SPG21	34821	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	65713781	65714189	65713985	Y	IGDCC3,IGDCC4	IGDCC4	NA	NA	NA	NA	IGDCC4	371	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	65831867	65832220	65831871	Y	NA	DPP8,PTPLAD1	C15orf44	IMR90	Hi-C	24141950	PTPLAD1	11111	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	65911878	65912241	65912183	Y	DENND4A	SLC24A1	NA	NA	NA	NA	SLC24A1	10174	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	66433661	66433831	66433761	Y	DENND4A,MAP2K1	NA	NA	NA	NA	NA	MEGF11	110254	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr15	66993287	66993569	66993487	Y	MAP2K1,SMAD6	SMAD6	NA	NA	NA	NA	SMAD6	721	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	67134448	67134928	67134631	Y	NA	NA	SMAD6,SNAPC5	IMR90	Hi-C	24141950	SMAD6	141882	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr15	67399103	67399775	67399548	Y	SMAD3	SMAD3	NA	NA	NA	NA	SMAD3	45002	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	67440675	67441024	67440815	Y	SMAD3	NA	NA	NA	NA	NA	RPS24P16	81760	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr15	67926783	67927143	67926830	Y	NA	NA	NA	NA	NA	NA	MAP2K5	93736	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	70391851	70392235	70392005	Y	TLE3	TLE3	NA	NA	NA	NA	TLE3	3336	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	71084406	71084742	71084644	Y	UACA,LARP6	UACA	UACA,LARP6,LRRC49	IMR90	Hi-C	24141950	UACA	30474	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	72518614	72519346	72519221	Y	ARIH1,PKM2	GRAMD2	NA	NA	NA	NA	GRAMD2	30488	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	72824073	72824405	72824125	Y	NA	NA	NA	NA	NA	NA	ARIH1	59406	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	74221354	74221537	74221415	Y	NA	LOXL1	NA	NA	NA	NA	LOXL1	5024	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	74346326	74346621	74346416	Y	NA	NA	NA	NA	NA	NA	PML	61312	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	74677413	74677899	74677622	Y	SEMA7A,SEMA7A,CSK,CLK3,ARID3B	SEMA7A	SEMA7A	K562	ChIA-PET	22265404	SEMA7A	46909	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	74689389	74689592	74689450	Y	SEMA7A,SEMA7A	SEMA7A	NA	NA	NA	NA	SEMA7A	35216	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	75250602	75250974	75250783	Y	RPP25	COX5A,SCAMP5,RPP25	NA	NA	NA	NA	RPP25	2797	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	75744907	75745094	75744993	Y	C15orf39,ODF3L1,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1089	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	76639120	76639380	76639270	Y	NA	ETFA,ISL2	NA	NA	NA	NA	ISL2	12055	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	79216586	79216987	79216944	Y	RASGRF1	CTSH	NA	NA	NA	NA	CTSH	22929	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	80211506	80211893	80211588	Y	NA	MTHFS,C15ORF37,ST20	NA	NA	NA	NA	C15ORF37	1614	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	80786706	80787081	80786777	Y	KIAA1199	NA	NA	NA	NA	NA	ARNT2	92014	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	81321783	81322073	81321879	Y	STARD5,MESDC1	MESDC2,MESDC1	C15orf26,IL16	IMR90	Hi-C	24141950	MESDC1	30488	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	85131508	85131753	85131631	Y	PDE8A	ZSCAN2,EGLN1P1	NA	NA	NA	NA	ZSCAN2	10464	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	86231326	86231343	86231335	Y	NA	NA	NA	NA	NA	NA	KLHL25	104918	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	86547032	86547326	86547179	Y	AGBL1	NA	NA	NA	NA	NA	KLHL25	210771	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	88877677	88878020	88877849	Y	NA	NA	NA	NA	NA	NA	MRPL46	130630	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	89187882	89188205	89187952	Y	NA	AEN,ISG20	NA	NA	NA	NA	ISG20	10498	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	90577561	90577868	90577654	Y	AP3S2,ZNF710,SEMA4B,IQGAP1	ZNF710	NA	NA	NA	NA	ZNF710	34937	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	92400491	92400865	92400640	Y	SLCO3A1	SLCO3A1	NA	NA	NA	NA	SLCO3A1	5566	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	93344993	93345488	93345070	Y	CHD2	FAM174B	NA	NA	NA	NA	FAM174B	5626	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	93363497	93364154	93363735	Y	ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2	FAM174B	ASB9P1,CHD2,LOC100507217	IMR90	Hi-C	24141950	FAM174B	12383	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	93374780	93375598	93375185	Y	NA	FAM174B,CHD2	CHD2,LOC100507217,ASB9P1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM174B	23666	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	93542371	93542660	93542397	Y	NA	NA	NA	NA	NA	NA	CHD2	117845	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	93864881	93865242	93865107	Y	NA	NA	NA	NA	NA	NA	CHD2	440355	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	96867031	96867104	96867071	Y	NA	NR2F2,NR2F2-AS1	NA	NA	NA	NA	NR2F2	63	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	96871345	96871608	96871517	Y	NR2F2,NR2F2,NR2F2	NR2F2,NR2F2-AS1	NA	NA	NA	NA	NR2F2-AS1	2755	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	96884042	96884481	96884402	Y	NA	NR2F2,NR2F2-AS1	NA	NA	NA	NA	NR2F2-AS1	15452	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr15	98545444	98546413	98546248	Y	NA	NA	NA	NA	NA	NA	ARRDC4	84660	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	98957223	98957617	98957414	Y	NA	NA	NA	NA	NA	NA	IGF1R	232583	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	99193577	99194531	99194069	Y	IGF1R	IGF1R	NA	NA	NA	NA	IGF1R	3377	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	99270923	99271213	99270975	Y	IGF1R	NA	NA	NA	NA	NA	IGF1R	80723	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	99525654	99525915	99525785	Y	NA	NA	NA	NA	NA	NA	SYNM	110505	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	99559007	99559192	99559062	Y	NA	NA	PGPEP1L	MCF7	ChIA-PET	22265404	SYNM	77228	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	99975346	99975780	99975666	Y	NA	MEF2A	LRRC28,LYSMD4,MEF2A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MEF2A	39590	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	100651295	100651582	100651483	Y	NA	NA	NA	NA	NA	NA	LYSMD4	379529	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	101783359	101783726	101783540	Y	CHSY1	CHSY1,SNRPA1	NA	NA	NA	NA	CHSY1	6411	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr15	101818299	101818511	101818407	Y	NA	CHSY1,SNRPA1	NA	NA	NA	NA	SNRPA1	14976	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	121563	121849	121614	Y	TMEM8A,PIGQ,PIGQ,NME4,MRPL28,ITFG3,DECR2,RHBDF1,MPG,MPG	SNRNP25,POLR3K,RHBDF1,MPG	NA	NA	NA	NA	RHBDF1	2505	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	658205	658397	658303	Y	NA	PIGQ,RAB40C,C16orf13,FAM195A,AL022341.3,WDR90	NA	NA	NA	NA	RAB40C	20848	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	2041117	2041468	2041266	Y	MAPK8IP3,EME2,SPSB3	NDUFB10,SNORA64,RPS2,SNHG9,TBL3,GFER,ZNF598,NPW,SLC9A3R2	NA	NA	NA	NA	GFER	8909	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	2478608	2478672	2478640	Y	RPS2,RNF151,TBL3,GFER,NTHL1,TSC2,TRAF7,MLST8,MLST8,DNASE1L2,ECI1,TCEB2,FLYWCH2	CCNF,C16orf59,TBC1D24	NA	NA	NA	NA	CCNF	1213	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	2518760	2519270	2519088	Y	RAB26,E4F1,SRRM2,C16orf59,TBC1D24,NTN3	CCNF,C16orf59,TBC1D24,ATP6V0C,AMDHD2	NA	NA	NA	NA	TBC1D24	3877	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	2917931	2918273	2918246	Y	NA	FLYWCH2,FLYWCH1	PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	FLYWCH2	12914	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	3013245	3013631	3013382	Y	KREMEN2	PAQR4,PKMYT1	NA	NA	NA	NA	PAQR4	3615	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	3156518	3156937	3156694	Y	PAQR4,CLUAP1,ZNF205	IL32,ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	3624	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	3200393	3200919	3200597	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	22615	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	3207486	3207903	3207712	Y	SRRM2,ZNF75A,ZNF597,ZNF200,ZNF200,ZNF200,NLRC3,MEFV	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	29708	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	4233647	4234082	4234013	Y	NA	NA	NA	NA	NA	NA	ADCY9	69461	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr16	4321625	4322178	4321908	Y	ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4	TFAP4	NA	NA	NA	NA	TFAP4	549	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr16	4349200	4349352	4349284	Y	NA	TFAP4	ADCY9,TFAP4,CREBBP,VASN,CORO7-PAM16	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TFAP4	28124	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	4666118	4666710	4666381	Y	NA	MGRN1	NA	NA	NA	NA	MGRN1	1624	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	4818680	4818913	4818758	Y	C16orf5,C16orf5,SEC14L5,ROGDI	C16orf71,ANKS3,ZNF500,ROGDI	NA	NA	NA	NA	ZNF500	3055	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	4993356	4993730	4993477	Y	PPL	PPL	UBN1,GLYR1,PPL,ROGDI,NUDT16L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PPL	15012	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	8950746	8950997	8950816	Y	NA	CARHSP1	NA	NA	NA	NA	CARHSP1	9869	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	9162231	9162510	9162397	Y	NA	C16orf72	USP7,C16orf72	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	C16orf72	20995	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	15583408	15583655	15583541	Y	NDE1,C16orf45	NA	KIAA0430	IMR90	Hi-C	24141950	C16orf45	57256	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	19302824	19302976	19302897	Y	NA	NA	NA	NA	NA	NA	SYT17	125531	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	20910424	20910792	20910538	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	718	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	20915885	20916169	20915941	Y	CRYM,DCUN1D3,LYRM1	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	6179	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	20917792	20918142	20917892	Y	NA	LYRM1,ERI2,DCUN1D3	DNAH3	IMR90	Hi-C	24141950	DCUN1D3	8086	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	21295163	21295477	21295440	Y	NA	CRYM-AS1	NA	NA	NA	NA	CRYM-AS1	14693	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	22202596	22202946	22202679	Y	POLR3E,CDR2	EEF2K	UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	12657	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	24263992	24264018	24264005	Y	NA	NA	NA	NA	NA	NA	RBBP6	282996	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	27533512	27533805	27533694	Y	JMJD5,JMJD5,IL21R,KIAA0556,GTF3C1	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	25429	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	30645556	30645885	30645776	Y	CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14	ZNF689,PRR14,FBRS	PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF689	12223	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	30876491	30876606	30876548	Y	NA	BCL7C,CTF1	NA	NA	NA	NA	BCL7C	27675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	49801728	49802101	49801855	Y	NA	NA	NA	NA	NA	NA	HEATR3	295751	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	56641054	56641530	56641359	Y	MT2A,MT1E	MT3,MT2A,MT1L,MT1E,MT1M,MT1A,MT1F	NA	NA	NA	NA	MT2A	943	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	56644047	56644457	56644379	Y	NLRC5,HERPUD1	MT3,MT2A,MT1L,MT1E,MT1M,MT1A,MT1F	NA	NA	NA	NA	MT2A	3936	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr16	57717053	57717380	57717096	Y	FAM192A,ZNF319,GPR97	NA	NA	NA	NA	NA	KATNB1	50262	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr16	57841964	57842337	57842236	Y	NA	NA	NA	NA	NA	NA	KIFC3	52620	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	66719308	66719396	66719350	Y	NA	CMTM4	NA	NA	NA	NA	CMTM4	9214	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	66906996	66907469	66907329	Y	SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2	NAE1,PDP2	NA	NA	NA	NA	NAE1	1837	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	67011641	67011860	67011695	Y	NA	FAM96B,CES2,CES4A,CBFB	NA	NA	NA	NA	CES4A	8632	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	67435763	67435871	67435819	Y	NA	ZDHHC1	NA	NA	NA	NA	ZDHHC1	12865	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	67597304	67597932	67597899	Y	THAP11,RLTPR,ACD	FAM65A,CTCF	NA	NA	NA	NA	CTCF	2994	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	68039646	68040046	68039896	Y	SLC7A6OS,RANBP10,PSMB10,DPEP2,NFATC3,DDX28	SLC12A4,DDX28	DPEP3,DPEP2	IMR90	Hi-C	24141950	DDX28	15724	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	68271348	68271876	68271591	Y	TSNAXIP1,SLC12A4,ESRP2	ESRP2,PLA2G15,SLC7A6	NA	NA	NA	NA	ESRP2	1343	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr16	69121214	69121414	69121257	Y	NA	HAS3,CHTF8,CIRH1A	HAS3	IMR90	Hi-C	24141950	HAS3	16053	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	69564577	69564882	69564731	Y	WWP2	NFAT5	NFAT5,CYB5B,TERF2,MIR1538	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	NFAT5	32115	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	69751128	69751528	69751345	Y	PDF,TERF2,NQO1	NQO1,NOB1,WWP2	NA	NA	NA	NA	NQO1	7326	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	69790577	69791500	69790768	Y	PDF,NIP7,NOB1	NQO1,NOB1,WWP2	NA	NA	NA	NA	WWP2	2709	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	70712649	70712861	70712739	Y	NA	MTSS1L	NA	NA	NA	NA	MTSS1L	5108	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	70779915	70780216	70780046	Y	NA	NA	NA	NA	NA	NA	VAC14	52848	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	70780634	70780961	70780786	Y	MTSS1L	NA	NA	NA	NA	NA	VAC14	52103	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	73096616	73096908	73096789	Y	NA	ZFHX3	ZFHX3	IMR90	Hi-C	24141950	ZFHX3	5019	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	73104505	73104770	73104567	Y	ZFHX3,ZFHX3	ZFHX3	ZFHX3,HTA	IMR90	Hi-C	24141950	ZFHX3	12908	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	74356396	74356719	74356558	Y	NA	PSMD7,RP11-252A24.2	NA	NA	NA	NA	PSMD7	27723	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	74701397	74701877	74701440	Y	RFWD3	RFWD3,MLKL	NA	NA	NA	NA	RFWD3	2618	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	74777612	74777799	74777727	Y	NA	MLKL,FA2H	NA	NA	NA	NA	FA2H	28930	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	75037611	75037819	75037667	Y	NA	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	5540	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	75286788	75287025	75286897	Y	NA	BCAR1	NA	NA	NA	NA	BCAR1	12926	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	75483148	75483204	75483176	Y	NA	CFDP1,TMEM170A,CHST6	NA	NA	NA	NA	TMEM170A	14191	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	77533444	77533555	77533500	Y	ADAMTS18	NA	NA	NA	NA	NA	NUDT7	220856	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	77708958	77709175	77709081	Y	NA	NUDT7	CLEC3A,WWOX,VAT1L	IMR90	Hi-C	24141950	NUDT7	45236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	78908280	78908607	78908407	Y	NA	NA	NA	NA	NA	NA	MAF	724004	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	78928740	78929250	78929028	Y	NA	NA	NA	NA	NA	NA	MAF	703361	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	79623380	79623748	79623651	Y	NA	MAF	NA	NA	NA	NA	MAF	8863	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	79635433	79635866	79635594	Y	MAF	MAF	NA	NA	NA	NA	MAF	2822	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	79692252	79692530	79692298	Y	NA	NA	WWOX	IMR90	Hi-C	24141950	MAF	59641	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	80710391	80710578	80710565	Y	NA	NA	NA	NA	NA	NA	CDYL2	125648	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr16	80838768	80839127	80839024	Y	CENPN,C16orf61,ATMIN,CDYL2	CDYL2	NA	NA	NA	NA	CDYL2	2542	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	81649296	81649780	81649593	Y	NA	NA	NA	NA	NA	NA	PLCG2	120922	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	85037797	85037883	85037799	Y	NA	ZDHHC7,KIAA0513	NA	NA	NA	NA	ZDHHC7	5258	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	85202555	85203049	85202710	Y	NA	NA	NA	NA	NA	NA	KIAA0513	143180	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr16	85428961	85429169	85429067	Y	NA	NA	LOC727710,LINC00311,GINS2,KIAA0182,FAM92B	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	292510	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	85497347	85497685	85497518	Y	KIAA0182,GINS2	NA	KIAA0182,LOC727710,C16orf74,LINC00311,ZDHHC7,LOC400548	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	223994	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	85586399	85586765	85586561	Y	KIAA0182,KIAA0182,GINS2	NA	LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	134914	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	86421149	86421325	86421222	Y	FOXF1,FOXC2	NA	LOC400550,LOC732275,LOC146513,FOXF1	IMR90	Hi-C	24141950	MTHFSD	165516	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr16	86609499	86609840	86609550	Y	FOXC2	MTHFSD	NA	NA	NA	NA	MTHFSD	22658	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	86619952	86620235	86620073	Y	FOXC2	MTHFSD	NA	NA	NA	NA	MTHFSD	33111	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	86775121	86775409	86775225	Y	NA	NA	FOXC2,FOXL1	IMR90	Hi-C	24141950	MTHFSD	188280	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	86985410	86985767	86985608	Y	FOXC2,FOXL1	NA	FOXL1,FOXC2,MTHFSD,FLJ30679,C16orf95	IMR90	Hi-C	24141950	MTHFSD	398569	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	87421939	87422407	87422148	Y	NA	MAP1LC3B,FBXO31	NA	NA	NA	NA	FBXO31	1341	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	87839693	87840050	87839856	Y	SLC7A5	KLHDC4	SLC7A5	MCF7	ChIA-PET	22265404	KLHDC4	42095	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr16	88063556	88063600	88063578	Y	BANP,BANP,BANP	NA	NA	NA	NA	NA	BANP	82706	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	88837093	88837695	88837443	Y	NA	PIEZO1,CDT1,APRT	NA	NA	NA	NA	PIEZO1	11924	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	88860126	88860280	88860179	Y	NA	PIEZO1,CDT1,APRT	NA	NA	NA	NA	CDT1	7341	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	89086731	89086969	89086798	Y	NA	NA	ACSF3,CBFA2T3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ACSF3	65814	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	89268043	89268411	89268231	Y	NA	ZNF778	NA	NA	NA	NA	ZNF778	13707	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	89451016	89451317	89451295	Y	CBFA2T3,ACSF3,ZNF778,ZNF276,ZNF276,TCF25,SPG7,SPATA2L,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	103652	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	89571786	89572109	89572034	Y	ACSF3,ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,ANKRD11	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	16461	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr16	89573610	89573931	89573734	Y	NA	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	18285	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	574639	574965	574941	Y	NA	VPS53	NA	NA	NA	NA	VPS53	47992	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	597415	597783	597745	Y	NA	VPS53,FAM57A	NA	NA	NA	NA	VPS53	25174	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	881410	881576	881449	Y	NA	NXN,TIMM22	NA	NA	NA	NA	NXN	400	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	1391218	1391783	1391434	Y	NA	CRK,MYO1C,INPP5K,PITPNA-AS1	NA	NA	NA	NA	MYO1C	2323	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr17	1620806	1621089	1620895	Y	PITPNA,SLC43A2,SCARF1,OVCA2,WDR81,WDR81,WDR81	PRPF8,TLCD2,WDR81,MIR22HG	NA	NA	NA	NA	MIR22HG	2338	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	1953067	1954207	1953327	Y	TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1	DPH1,OVCA2,HIC1	NA	NA	NA	NA	HIC1	1241	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	2095819	2096093	2095903	Y	WDR81	NA	NA	NA	NA	NA	SRR	108584	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	2163031	2163247	2163098	Y	SMYD4,MNT,METTL16,SMG6,SMG6	SRR,SMG6	NA	NA	NA	NA	SRR	41430	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	2300026	2300553	2300288	Y	RAP1GAP2,PAFAH1B1,MNT	MNT	NA	NA	NA	NA	MNT	1859	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	2302778	2303366	2303033	Y	SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT	MNT	NA	NA	NA	NA	MNT	366	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	2305266	2305571	2305415	Y	RAP1GAP2,PAFAH1B1,MNT	MNT	NA	NA	NA	NA	MNT	2854	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	2652547	2653322	2653300	Y	NA	NA	NA	NA	NA	NA	PAFAH1B1	158043	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	2719284	2719546	2719376	Y	NA	NA	NA	NA	NA	NA	PAFAH1B1	224780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	2757819	2758227	2758154	Y	NA	NA	NA	NA	NA	NA	PAFAH1B1	263315	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	6655808	6656203	6655969	Y	RNASEK,GABARAP,XAF1	XAF1	XAF1,MIR4520A,ALOX15P1,MIR4520B,MED31,C17orf100,FBXO39,TEKT1	IMR90	Hi-C	24141950	XAF1	563	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	7389589	7389989	7389739	Y	C17orf49,GPS2,ACAP1,WRAP53,KDM6B,CHD3,AMAC1L3,ZBTB4,POLR2A	FGF11,CHRNB1,ZBTB4,POLR2A	NA	NA	NA	NA	POLR2A	3904	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	7738822	7740614	7739046	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	18450	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	7745915	7746944	7746139	Y	NA	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	12120	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	7746991	7747556	7747325	Y	POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B	CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	CYB5D1	11508	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr17	8029634	8030116	8029995	Y	NA	HES7,PER1,VAMP2,SNORD118,TMEM107	NA	NA	NA	NA	HES7	4224	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr17	8031830	8031985	8031892	Y	CNTROB,ODF4	HES7,PER1,VAMP2,SNORD118,TMEM107	ALOXE3,HES7	IMR90	Hi-C	24141950	HES7	6420	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	8090038	8090540	8090163	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	1024	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	8090795	8091158	8090849	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	406	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	8103328	8103700	8103595	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,PFAS,CTC1	NA	NA	NA	NA	AURKB	8218	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	9155924	9156306	9156115	Y	PIK3R5	NA	NA	NA	NA	NA	NTN1	233065	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	13445928	13446299	13446210	Y	NA	NA	NA	NA	NA	NA	COX10-AS1	524513	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	13447669	13448094	13447771	Y	HS3ST3A1	NA	NA	NA	NA	NA	COX10-AS1	522718	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	14736627	14737029	14736827	Y	NA	NA	HS3ST3B1,HS3ST3A1	IMR90	Hi-C	24141950	RPS18P12	129776	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	15787021	15787553	15787332	Y	ZSWIM7,TTC19,ADORA2B	NA	NA	NA	NA	NA	ADORA2B	58678	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	15925706	15925935	15925791	Y	FAM18B2,PIGL,NCOR1,TTC19,ZSWIM7	TTC19,ZSWIM7	NA	NA	NA	NA	ZSWIM7	24675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	16440164	16440317	16440266	Y	ZNF624,CCDC144A	FAM211A,ZNF287	NA	NA	NA	NA	ZNF287	30203	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	17597479	17598220	17598134	Y	ALKBH5,FLCN,COPS3	RAI1	NA	NA	NA	NA	RAI1	14692	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	17655489	17655938	17655636	Y	DRG2,ALKBH5,COPS3,MED9	NA	NA	NA	NA	NA	RAI1	72702	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	17743258	17743857	17743527	Y	SMCR8	SREBF1	NA	NA	NA	NA	SREBF1	4933	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	18804175	18804500	18804326	Y	PRPSAP2	NA	NA	NA	NA	NA	PRPSAP2	62777	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	19656390	19656618	19656531	Y	MAPK7,MAPK7	ALDH3A1	NA	NA	NA	NA	ALDH3A1	6134	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	21179100	21179414	21179208	Y	CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3	C17orf103,MAP2K3	MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAP2K3	6570	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr17	21189600	21190105	21189864	Y	MAP2K3,MAP2K3	C17orf103,MAP2K3	NA	NA	NA	NA	MAP2K3	3616	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr17	21795425	21795556	21795487	Y	NA	NA	NA	NA	NA	NA	C17orf51	319703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	25680632	25681097	25680982	Y	NA	NA	KSR1,WSB1,MIR4522	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WSB1	61530	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	26135195	26135302	26135249	Y	NA	NA	NA	NA	NA	NA	NLK	231461	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	27429797	27430178	27430111	Y	NA	NA	NA	NA	NA	NA	MYO18A	75252	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	29596751	29597032	29596911	Y	NA	EVI2A	NA	NA	NA	NA	EVI2A	49870	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	29876692	29877391	29877039	Y	NA	NA	NA	NA	NA	NA	EVI2A	229790	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	30823818	30823986	30823902	Y	NA	CDK5R1	NA	NA	NA	NA	CDK5R1	12181	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	36412216	36412471	36412263	Y	NA	RP11-1407O15.2,MRPL45	NA	NA	NA	NA	RP11-1407O15.2	7387	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	36480536	36480738	36480637	Y	NA	MRPL45,SOCS7	NA	NA	NA	NA	SOCS7	25373	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	36758537	36758835	36758687	Y	NA	SRCIN1	NA	NA	NA	NA	SRCIN1	1348	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	36907984	36908100	36908042	Y	NA	MLLT6,CISD3,PCGF2,PSMB3,PIP4K2B	NA	NA	NA	NA	PSMB3	995	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	37910411	37911394	37910787	Y	FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3	MIEN1	NA	NA	NA	NA	MIEN1	25371	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	38084566	38084955	38084762	Y	NA	ORMDL3	NA	NA	NA	NA	ORMDL3	2712	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	38674878	38675250	38674921	Y	TMEM99,TMEM99,TMEM99,CDC6,TOP2A,TNS4	NA	IGFBP4,KRT42P,CCR7,RARA,GJD3,TOP2A,TNS4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IGFBP4	77176	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	39653134	39653351	39653234	Y	NA	KRT19	NA	NA	NA	NA	KRT19	29209	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	39683248	39683750	39683386	Y	NA	KRT19	NA	NA	NA	NA	KRT19	688	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	39686458	39686891	39686666	Y	KRT19	KRT19	NA	NA	NA	NA	KRT19	3898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	39705098	39705383	39705310	Y	NA	KRT19	NA	NA	NA	NA	KRT19	22538	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	39807728	39808143	39807934	Y	JUP,KRT36,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17	KRT17,EIF1	KRT19,KRT15,LOC147093	MCF7	ChIA-PET	22265404	KRT17	28634	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	40442498	40442595	40442547	Y	NA	STAT5B,STAT5A	NA	NA	NA	NA	STAT5A	4933	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	41042095	41042419	41042257	Y	NA	NA	NA	NA	NA	NA	BECN1	58728	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	41546132	41546290	41546231	Y	NA	DHX8	LOC100130581,ARL4D,DHX8	IMR90	Hi-C	24141950	DHX8	12943	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	42245888	42246083	42245988	Y	NA	HDAC5,C17orf53,TMUB2,ATXN7L3	NA	NA	NA	NA	TMUB2	16255	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr17	42276572	42276897	42276785	Y	TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3	TMUB2,ATXN7L3,UBTF	NA	NA	NA	NA	ATXN7L3	1091	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr17	42619909	42620020	42619938	Y	NA	GPATCH8,FZD2	GPATCH8,FZD2,C17orf104,CCDC43,DBF4B,ITGA2B	IMR90	Hi-C	24141950	FZD2	12905	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	42919802	42920006	42919936	Y	NA	GJC1	NA	NA	NA	NA	GJC1	13618	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	43304336	43305039	43304628	Y	PLEKHM1,ARHGAP27,FMNL1	FMNL1	NA	NA	NA	NA	FMNL1	7525	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	43398309	43398621	43398414	Y	NA	MAP3K14	LOC100133991,FMNL1,MAP3K14,TEX34,ARHGAP27	IMR90	Hi-C	24141950	MAP3K14	5895	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	44848812	44849347	44849259	Y	NA	NA	NA	NA	NA	NA	RPS7P11	51279	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr17	45302836	45303175	45303013	Y	NA	CDC27	NA	NA	NA	NA	CDC27	38048	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	45609469	45609601	45609554	Y	NA	NPEPPS	NA	NA	NA	NA	NPEPPS	11161	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	45771013	45771467	45771041	Y	NPEPPS,OSBPL7,CDK5RAP3,TBX21,TBKBP1	KPNB1,TBX21	NA	NA	NA	NA	TBX21	37143	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	46102426	46102830	46102617	Y	NA	COPZ2,NFE2L1	NA	NA	NA	NA	COPZ2	10562	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	46289129	46289412	46289274	Y	NA	NA	NA	NA	NA	NA	SNX11	110410	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	46662684	46663231	46662943	Y	HOXB2,HOXB3,HOXB4,HOXB9,HOXB8,HOXB7,HOXB6,HOXB5	HOXB6,HOXB9	NA	NA	NA	NA	HOXB6	17123	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	46702579	46702749	46702606	Y	HOXB2,HOXB3,SNF8,HOXB5,HOXB6,HOXB7,HOXB8,HOXB9	HOXB6,HOXB9,RP11-357H14.17	NA	NA	NA	NA	HOXB9	740	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	47270202	47270509	47270359	Y	CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3	NA	NA	NA	NA	NA	B4GALNT2	62380	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	47792509	47793110	47792630	Y	PPP1R9B,MYST2	SPOP,SLC35B1	NA	NA	NA	NA	SLC35B1	8133	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	48066634	48067004	48066930	Y	NA	DLX4	NA	NA	NA	NA	DLX4	22300	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	48139711	48140314	48140012	Y	XYLT2,LRRC59,EPN3,ITGA3	ITGA3,PDK2	NA	NA	NA	NA	ITGA3	8379	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	48206052	48206167	48206088	Y	NA	PDK2,PPP1R9B	NA	NA	NA	NA	PPP1R9B	19824	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	48228924	48229616	48229504	Y	SPATA20,SAMD14	PPP1R9B,COL1A1	NA	NA	NA	NA	PPP1R9B	2933	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	48255388	48256117	48255676	Y	NA	PPP1R9B,COL1A1	NA	NA	NA	NA	COL1A1	20876	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	48716257	48716537	48716480	Y	NA	ABCC3	NA	NA	NA	NA	ABCC3	6119	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	49075036	49075414	49075227	Y	NA	NA	NA	NA	NA	NA	SPAG9	120812	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	50036821	50037210	50037183	Y	CA10,CA10,CA10	NA	NA	NA	NA	NA	UTP18	700932	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	53497202	53497618	53497598	Y	NA	NA	NA	NA	NA	NA	MMD	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	54263832	54264049	54263912	Y	NA	NA	NA	NA	NA	NA	NOG	405011	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	56025910	56026308	56026041	Y	SUPT4H1	CUEDC1,VEZF1	NA	NA	NA	NA	CUEDC1	4376	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	57409690	57409997	57409875	Y	YPEL2	YPEL2	NA	NA	NA	NA	YPEL2	2640	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	57502934	57503327	57503130	Y	YPEL2	NA	YPEL2	IMR90	Hi-C	24141950	YPEL2	95884	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	57863159	57864676	57863979	Y	NA	NA	NA	NA	NA	NA	MIR21	51951	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	59474585	59474918	59474715	Y	NA	TBX2	NA	NA	NA	NA	TBX2	339	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	60868640	60868941	60868827	Y	NA	MARCH10	NA	NA	NA	NA	MARCH10	14764	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	60973132	60973339	60973182	Y	TLK2	NA	NA	NA	NA	NA	MARCH10	89427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	61043121	61043648	61043243	Y	NA	NA	NA	NA	NA	NA	MARCH10	159416	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	62487438	62487665	62487534	Y	ICAM2	POLG2,MIR3064,CEP95,DDX5	NA	NA	NA	NA	POLG2	3489	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	62526246	62526643	62526459	Y	NA	POLG2,MIR3064,CEP95,DDX5	NA	NA	NA	NA	DDX5	23929	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	62675748	62676312	62676051	Y	SMURF2	SMURF2	SMURF2,LOC146880	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SMURF2	19562	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	62703261	62703596	62703473	Y	SMURF2	SMURF2	SMURF2	IMR90	Hi-C	24141950	SMURF2	47075	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	62705157	62705447	62705234	Y	SMURF2	SMURF2	SMURF2	IMR90	Hi-C	24141950	SMURF2	48971	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	63119249	63119621	63119552	Y	GNA13	RGS9	RGS9,GNA13,AMZ2P1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RGS9	11928	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	63639930	63640399	63640359	Y	NA	NA	NA	NA	NA	NA	RGS9	508381	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	64128284	64128318	64128301	Y	CEP112,CEP112	NA	NA	NA	NA	NA	CEP112	57884	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	64194072	64194322	64194164	Y	NA	CEP112	NA	NA	NA	NA	CEP112	7870	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	64301184	64301397	64301241	Y	NA	PRKCA	NA	NA	NA	NA	PRKCA	4430	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	64455929	64456369	64456061	Y	NA	NA	NA	NA	NA	NA	PRKCA	159175	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	70412502	70412837	70412669	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	208533	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	70417215	70417683	70417549	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	203687	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	70585924	70586379	70586141	Y	NA	RPL32P33	NA	NA	NA	NA	RPL32P33	34991	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	70664433	70664574	70664507	Y	NA	RPL32P33	NA	NA	NA	NA	RPL32P33	43063	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	70712408	70712674	70712489	Y	NA	NA	NA	NA	NA	NA	RPL32P33	91038	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	71287548	71287861	71287762	Y	NA	CDC42EP4	NA	NA	NA	NA	CDC42EP4	18453	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	71338137	71338558	71338458	Y	NA	CDC42EP4	NA	NA	NA	NA	CDC42EP4	31823	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	72633570	72634215	72633653	Y	TTYH2,TTYH2,CD300A,CD300LB,CD300C,CD300LD,TMEM104,SLC16A5,CD300E,CD300LF	NA	GPRC5C,C17orf77,CD300LD,RAB37,CD300LF,CD300E	IMR90	Hi-C	24141950	SLC9A3R1	108576	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	72978355	72978661	72978434	Y	KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L	CDR2L,ICT1,KCTD2	CDR2L,ICT1,C17orf28,HN1	MCF7,K562	ChIA-PET	22265404	CDR2L	3066	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	73073656	73074040	73073685	Y	RAB37,RAB37,ARMC7	KCTD2,ATP5H,SLC16A5,ARMC7	NA	NA	NA	NA	SLC16A5	7782	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	73426423	73426691	73426652	Y	MRPS7	GRB2,KIAA0195	NA	NA	NA	NA	KIAA0195	8549	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	73696530	73696897	73696707	Y	SAP30BP,ITGB4,ITGB4	SAP30BP,RECQL5,ITGB4	NA	NA	NA	NA	ITGB4	18511	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	74117633	74117738	74117682	Y	NA	GALR2,EXOC7	NA	NA	NA	NA	EXOC7	1976	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	74440987	74441354	74441087	Y	NA	UBE2O	NA	NA	NA	NA	UBE2O	5934	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	74705254	74705618	74705431	Y	MXRA7	MXRA7,JMJD6,METTL23,MFSD11,SRSF2	NA	NA	NA	NA	MXRA7	156	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75094541	75094684	75094581	Y	JMJD6,SEC14L1,SEC14L1,SEC14L1,SEC14L1	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	13743	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75120383	75120864	75120582	Y	JMJD6,SEC14L1,SEC14L1,SEPT9,SEPT9,SEC14L1,SEC14L1	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	39585	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75167597	75167895	75167730	Y	NA	NA	NA	NA	NA	NA	LINC00338,SEC14L1	86799	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75281811	75282557	75281917	Y	SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	7160	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	75319028	75319523	75319372	Y	SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	44377	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	75319670	75320031	75319742	Y	MGAT5B,SEPT9,SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	45019	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	75384636	75384998	75384811	Y	NA	NA	NA	NA	NA	NA	SEPT9	109985	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75450694	75450827	75450755	Y	NA	NA	NA	NA	NA	NA	SEPT9	176043	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75798844	75799281	75799210	Y	TNRC6C,TMEM235	NA	LOC100507351,TNRC6C	IMR90	Hi-C	24141950	TNRC6C	198968	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75830749	75830836	75830793	Y	TMC8,TMC6	NA	TNRC6C,LOC100507351	IMR90	Hi-C	24141950	TNRC6C	167413	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	75954393	75954796	75954614	Y	NA	TNRC6C	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TNRC6C	43453	CAGE	RERF-LC-AI	hg19	FANTOM5	15.7674444737661
chr17	76325206	76325964	76325662	Y	CYTH1,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	28194	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	76337607	76338208	76338068	Y	USP36,CYTH1,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	15950	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	76338337	76338836	76338651	Y	USP36,CYTH1,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	15322	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	76382008	76383398	76383057	Y	USP36,CYTH1,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	PGS1	9287	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	76879007	76879631	76879400	Y	CYTH1,ENGASE,CANT1,USP36	USP36,TIMP2	NA	NA	NA	NA	TIMP2	39838	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr17	76930060	76930674	76930419	Y	NA	TIMP2,LGALS3BP	TIMP2	MCF7	ChIA-PET	22265404	TIMP2	10591	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	77178498	77178880	77178689	Y	NA	NA	NA	NA	NA	NA	ENGASE	109477	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	77967532	77967765	77967641	Y	CBX8,CBX4,RNF213,GAA,EIF4A3	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	39882	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	78121490	78121818	78121740	Y	NA	GAA,EIF4A3	NA	NA	NA	NA	EIF4A3	2508	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	78238527	78238862	78238699	Y	GAA,EIF4A3,SGSH,RNF213	SLC26A11,SGSH,RNF213	NA	NA	NA	NA	RNF213	5862	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	78830209	78830686	78830492	Y	NA	NA	NA	NA	NA	NA	CHMP6	132712	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	79017666	79018027	79017910	Y	AZI1,BAIAP2	BAIAP2	NA	NA	NA	NA	BAIAP2	10718	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr17	79024187	79024380	79024262	Y	BAIAP2	BAIAP2	NA	NA	NA	NA	BAIAP2	17239	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	79068878	79069252	79068906	Y	C17orf56	NA	NA	NA	NA	NA	BAIAP2	61930	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	79319325	79319648	79319507	Y	FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1	LINC00482	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00482	38277	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	79339701	79340108	79339894	Y	NA	NA	SLC38A10,NPLOC4	IMR90	Hi-C	24141950	LINC00482	58653	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	79451287	79451558	79451462	Y	AATK,AZI1,BAHCC1	ACTG1	NA	NA	NA	NA	ACTG1	37315	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	79546845	79547000	79546944	Y	PCYT2	C17orf70	NA	NA	NA	NA	C17orf70	27858	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	80052713	80052821	80052782	Y	MRPL12,SLC25A10,GCGR,PCYT2,ASPSCR1,HEXDC,FOXK2,LRRC45,DCXR,DUS1L,FASN	GPS1,RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	1387	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	80066063	80066430	80066275	Y	GCGR,DCXR	DUS1L,FASN	NA	NA	NA	NA	FASN	11855	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	80214734	80215057	80214944	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	14550	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr17	80328282	80328672	80328333	Y	NA	SECTM1,HEXDC	NA	NA	NA	NA	SECTM1	38332	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	666183	666708	666437	Y	THOC1,YES1,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	9843	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	667633	668016	667981	Y	THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11293	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr18	2302701	2302761	2302738	Y	NA	NA	NA	NA	NA	NA	METTL4	266747	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	2516331	2516615	2516492	Y	NA	NA	NA	NA	NA	NA	METTL4	52893	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	2548368	2548472	2548420	Y	NA	METTL4,NDC80	NA	NA	NA	NA	METTL4	21036	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	2851086	2851429	2851256	Y	EMILIN2	NA	LPIN2	IMR90	Hi-C	24141950	LPIN2	159884	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	2972158	2972493	2972361	Y	TGIF1,TGIF1,TGIF1,MYL12B,SMCHD1,EMILIN2	LPIN2	NA	NA	NA	NA	LPIN2	38820	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	3015219	3015501	3015351	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,METTL4,EMILIN2	LPIN2	LPIN2	K562	ChIA-PET	22265404	LPIN2	3906	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	3250721	3251122	3250738	Y	NA	MYL12A,MYL12B	NA	NA	NA	NA	MYL12A	5242	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	3527351	3527432	3527391	Y	NA	NA	NA	NA	NA	NA	TGIF1	117745	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	3594733	3596177	3595596	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	185127	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	3623872	3624258	3624140	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	214266	CAGE	RERF-LC-AI	hg19	FANTOM5	4.44722792849813
chr18	3624338	3624601	3624482	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	214732	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr18	3624841	3625119	3625035	Y	MYL12A,MYL12B,MYL12B,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	215235	CAGE	RERF-LC-AI	hg19	FANTOM5	4.44722792849813
chr18	5895274	5895803	5895585	Y	TMEM200C	NA	L3MBTL4	IMR90	Hi-C	24141950	L3MBTL4	517433	CAGE	RERF-LC-AI	hg19	FANTOM5	4.44722792849813
chr18	6752571	6752962	6752632	Y	NA	ARHGAP28	ARHGAP28	IMR90	Hi-C	24141950	ARHGAP28	24854	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	7460129	7460467	7460298	Y	NA	NA	NA	NA	NA	NA	PTPRM	104313	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	7512213	7512497	7512355	Y	NA	NA	PTPRM	IMR90	Hi-C	24141950	PTPRM	52283	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	8948545	8948913	8948824	Y	TWSG1	NA	CCDC165	IMR90	Hi-C	24141950	NDUFV2	151715	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr18	9548277	9548390	9548335	Y	ANKRD12,VAPA,RAB31,PPP4R1	NA	NA	NA	NA	NA	PPP4R1	64848	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	9612296	9612535	9612373	Y	NA	PPP4R1	NA	NA	NA	NA	PPP4R1	703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	9643596	9643835	9643765	Y	NA	PPP4R1	PPP4R1,VAPA,ANKRD12	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PPP4R1	30358	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	11849903	11850727	11850169	Y	MPPE1,CHMP1B	CHMP1B	NA	NA	NA	NA	CHMP1B	508	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr18	11859926	11860218	11860181	Y	CHMP1B	CHMP1B,MPPE1	NA	NA	NA	NA	CHMP1B	10531	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	11947272	11947721	11947412	Y	CHMP1B	MPPE1,IMPA2	IMPA2,GNAL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IMPA2	31303	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr18	12288068	12288497	12288213	Y	NA	TUBB6	TUBB6	IMR90	Hi-C	24141950	TUBB6	17171	CAGE	RERF-LC-AI	hg19	FANTOM5	15.3631510257208
chr18	12317654	12318000	12317871	Y	CHMP1B	TUBB6	NA	NA	NA	NA	TUBB6	11986	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	12641281	12641332	12641311	Y	SPIRE1,SPIRE1,PSMG2	AP005482.1,SPIRE1,PSMG2	NA	NA	NA	NA	AP005482.1	14710	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	12993260	12993605	12993433	Y	NA	SEH1L,CEP192	NA	NA	NA	NA	CEP192	3899	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	13217020	13217525	13217240	Y	NA	NA	NA	NA	NA	NA	CEP192	227659	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	13220671	13221282	13220939	Y	NA	NA	NA	NA	NA	NA	CEP192	231310	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	13276704	13277362	13276805	Y	RNMT,CEP192	NA	NA	NA	NA	NA	CEP192	287343	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	13501125	13501479	13501273	Y	NA	NA	NA	NA	NA	NA	RNMT	223180	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	13542199	13542509	13542255	Y	NA	NA	NA	NA	NA	NA	RNMT	182150	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	19929586	19929820	19929712	Y	NA	NA	GATA6	IMR90	Hi-C	24141950	GATA6	182182	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	20139802	20140256	20140003	Y	GATA6	NA	CTAGE1,GATA6	IMR90	Hi-C	24141950	RBBP8	235968	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	20855209	20855599	20855401	Y	NA	NA	NA	NA	NA	NA	CABLES1	142681	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	21336252	21336608	21336275	Y	NA	NA	NA	NA	NA	NA	ANKRD29	95403	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	21417655	21417852	21417722	Y	NPC1,LAMA3	NA	NA	NA	NA	NA	TTC39C	152885	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	22828001	22828237	22828119	Y	NA	NA	NA	NA	NA	NA	ZNF521	101917	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	26744101	26744374	26744185	Y	NA	NA	NA	NA	NA	NA	DSC2	1936004	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr18	34107164	34107375	34107280	Y	RPRD1A,FHOD3	NA	NA	NA	NA	NA	FHOD3	231487	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	42419261	42419416	42419316	Y	NA	NA	NA	NA	NA	NA	EPG5	1125824	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	45379355	45379691	45379492	Y	NA	NA	NA	NA	NA	NA	SMAD2	75824	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	45454827	45455289	45455128	Y	NA	SMAD2	NA	NA	NA	NA	SMAD2	226	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	46066779	46067121	46067052	Y	CTIF	CTIF	NA	NA	NA	NA	CTIF	3362	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	46317070	46317289	46317180	Y	NA	NA	NA	NA	NA	NA	CTIF	253653	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	46342129	46342429	46342253	Y	SMAD7,SMAD7	NA	NA	NA	NA	NA	CTIF	278712	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	46461141	46461770	46461393	Y	SMAD7,SMAD7	NA	NA	NA	NA	NA	CTIF	397724	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	46502180	46502412	46502333	Y	SMAD7	NA	SMAD7,CTIF	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CTIF	438763	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	47325286	47325511	47325399	Y	NA	ACAA2	NA	NA	NA	NA	ACAA2	12819	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	47834061	47834491	47834223	Y	CCDC11,MBD1,MBD1	CCDC11,MBD1,CXXC1	CCDC11,CXXC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CXXC1	21387	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	56188664	56188776	56188720	Y	NEDD4L	NA	NA	NA	NA	NA	ALPK2	105413	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	56193191	56193601	56193321	Y	MALT1	NA	NA	NA	NA	NA	ALPK2	100588	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	56337372	56337558	56337406	Y	MALT1	ALPK2,MALT1	NA	NA	NA	NA	MALT1	754	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	59305817	59306136	59305977	Y	NA	NA	RNF152,PIGN	IMR90	Hi-C	24141950	RPL30P14	235379	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	60193382	60194139	60194065	Y	KIAA1468,PHLPP1,ZCCHC2	ZCCHC2	NA	NA	NA	NA	ZCCHC2	5142	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr18	60263992	60264160	60264076	Y	NA	NA	NA	NA	NA	NA	ZCCHC2	75752	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	70535937	70536272	70536159	Y	NA	NA	NA	NA	NA	NA	TIMM21	1277474	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr18	74205649	74206020	74205889	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	RP11-17M16.1	172	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	74292470	74292738	74292612	Y	NA	NA	NA	NA	NA	NA	RP11-17M16.1	86993	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	74775208	74775557	74775363	Y	MBP	NA	NA	NA	NA	NA	ZNF236	242645	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	75318958	75319303	75319131	Y	NA	NA	NA	NA	NA	NA	ZNF236	786395	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	76574789	76574960	76574953	Y	SALL3	NA	NA	NA	NA	NA	ATP9B	252325	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr18	77327843	77328066	77328013	Y	NA	NA	NFATC1,ATP9B	IMR90	Hi-C	24141950	CTDP1	109735	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	290136	290651	290316	Y	RNF126,GZMM,C19orf21,PPAP2C,PPAP2C	PPAP2C	NA	NA	NA	NA	PPAP2C	743	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	441805	442098	441996	Y	PALM,HCN2,FGF22,C2CD4C,SHC2,ODF3L2	SHC2	NA	NA	NA	NA	SHC2	16898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	488227	488667	488380	Y	NA	SHC2,TPGS1,CDC34	ODF3L2,SHC2,TPGS1,MADCAM1	MCF7,K562	ChIA-PET	22265404	TPGS1	16632	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	567332	567750	567473	Y	NA	CDC34,BSG,HCN2	NA	NA	NA	NA	BSG	1547	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	778993	779222	779048	Y	GPX4,BSG,CNN2	PTBP1,MIR3187	NA	NA	NA	NA	PTBP1	15853	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	782330	783005	782707	Y	NA	PTBP1,MIR3187	NA	NA	NA	NA	PTBP1	12070	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr19	1171933	1172315	1172045	Y	NA	STK11	NA	NA	NA	NA	SBNO2	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	1172839	1173266	1172915	Y	CFD,ATP5D,GPX4,GPX4	SBNO2,STK11	NA	NA	NA	NA	SBNO2	557	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	1240232	1240534	1240365	Y	MUM1,APC2,C19orf26	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1	NA	NA	NA	NA	ATP5D	483	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	1252961	1253429	1253036	Y	C19orf22,ARID3A,CNN2,ABCA7,HMHA1,SBNO2,SBNO2,MIDN,CIRBP	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1	NA	NA	NA	NA	CIRBP	3955	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	1260732	1261171	1260912	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1	NA	NA	NA	NA	CIRBP	3348	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	1266359	1266798	1266589	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1	NA	NA	NA	NA	C19orf24	6228	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	1408607	1408695	1408655	Y	CNN2,POLR2E,GPX4,GPX4,UQCR11,SCAMP4,FAM108A1,ADAT3,RPS15	NDUFS7,GAMT,DAZAP1,RPS15	NA	NA	NA	NA	DAZAP1	3039	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	1855247	1855761	1855485	Y	SPPL2B,SF3A2,PLEKHJ1,LSM7,C19orf35,NDUFS7,C19orf25,TCF3,ATP8B3,ATP8B3,MOBKL2A,BTBD2,REXO1,SCAMP4,KLF16,CSNK1G2,ADAT3	ATP8B3,REXO1,KLF16,SCAMP4,ADAT3	NA	NA	NA	NA	KLF16	5806	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	2059605	2060167	2060113	Y	REXO1,FAM108A1,SCAMP4,ADAT3,BTBD2	BTBD2,MKNK2,MOB3A	NA	NA	NA	NA	MKNK2	10362	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	2061356	2061737	2061654	Y	SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A	BTBD2,MKNK2,MOB3A	NA	NA	NA	NA	MKNK2	12113	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr19	2165096	2165788	2165320	Y	REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	2632	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	2330710	2331138	2330903	Y	NA	SPPL2B,LSM7	NA	NA	NA	NA	LSM7	4091	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	2540691	2541097	2540881	Y	TIMM13	NA	NA	NA	NA	NA	GADD45B	66571	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	2804437	2804563	2804500	Y	NA	SGTA,THOP1,ZNF554,ZNF555	NA	NA	NA	NA	ZNF554	13309	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	3397236	3397600	3397594	Y	NA	NFIC	NA	NA	NA	NA	NFIC	39675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	3428769	3429112	3428821	Y	TLE2,NFIC	NA	NA	NA	NA	NA	DOHH	69826	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	4456385	4456784	4456737	Y	UBXN6,UBXN6	UBXN6,HDGFRP2	NA	NA	NA	NA	UBXN6	566	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	4575288	4575908	4575613	Y	CCDC94,TICAM1,SEMA6B	SEMA6B	EBI3,CCDC94,ANKRD24,TNFAIP8L1,C19orf10	IMR90	Hi-C	24141950	SEMA6B	17468	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	4812881	4813376	4813265	Y	SEMA6B,TICAM1	FEM1A,TICAM1	NA	NA	NA	NA	TICAM1	16340	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	4870294	4870493	4870397	Y	SEMA6B,TICAM1	TICAM1,PLIN3,UHRF1	NA	NA	NA	NA	PLIN3	4514	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	5091674	5091892	5091780	Y	NA	NA	NA	NA	NA	NA	KDM4B	124549	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	5336072	5336705	5336347	Y	PTPRS	PTPRS	NA	NA	NA	NA	PTPRS	2109	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	5435162	5435432	5435167	Y	NA	NA	KDM4B,PTPRS	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTPRS	96348	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr19	8674150	8674979	8674636	Y	ADAMTS10	ADAMTS10	NA	NA	NA	NA	ADAMTS10	530	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr19	8749433	8750038	8749788	Y	PRAM1,MYO1F	NA	NA	NA	NA	NA	ADAMTS10	75813	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	10715339	10715596	10715546	Y	ICAM3,TYK2,PDE4A,DNM2,ATG4D,CDKN2D,CDKN2D,SLC44A2	KRI1,CDKN2D,SLC44A2,ILF3	NA	NA	NA	NA	SLC44A2	4206	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	10992105	10992492	10992295	Y	NA	TMED1,CARM1,YIPF2,C19orf52	NA	NA	NA	NA	CARM1	11916	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	12888910	12889352	12889266	Y	NA	C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A	NA	NA	NA	NA	JUNB	10958	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	12899457	12901460	12900777	Y	NA	PRDX2,RNASEH2A,MAST1	NA	NA	NA	NA	JUNB	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	13262107	13262928	13262695	Y	MAN2B1,C19orf43,JUNB	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	2878	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	13278382	13278991	13278445	Y	BEST2,JUNB,LYL1,STX10	STX10,IER2	NA	NA	NA	NA	IER2	19153	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	13972364	13973309	13972780	Y	CCDC130,RFX1,PRKACA,IL27RA,DCAF15,ZSWIM4	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	41705	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	14404408	14404769	14404597	Y	NA	NA	NA	NA	NA	NA	CD97	84544	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	14732511	14733275	14733016	Y	SYDE1	NA	NA	NA	NA	NA	NDUFB7	51637	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	18201963	18202321	18202146	Y	FCHO1,FCHO1,JAK3,UBA52,LRRC25,IFI30,FKBP8,ELL,ARRDC2,ARRDC2,IL12RB1	MAST3	MAST3	K562	ChIA-PET	22265404	MAST3	4282	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	18402387	18403564	18402535	Y	JAK3,KCNN1,ARRDC2,ARRDC2,IL12RB1,MAST3,IFI30,SSBP4,LRRC25,KLHL26,ELL,CRTC1,C19orf60,JUND,PGPEP1	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	MIR3188	11500	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	18430446	18430898	18430653	Y	ARRDC2,IL12RB1,IFI30,LRRC25	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	LSM4	1186	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	19005223	19006062	19005586	Y	TMEM59L,KLHL26,CRTC1,SUGP2,SLC25A42,NCAN,HAPLN4,HOMER3,HOMER3,GDF1	GDF1,COPE,DDX49,HOMER3	NA	NA	NA	NA	CERS1	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	21505293	21505670	21505490	Y	ZNF429,ZNF708,ZNF493	ZNF708,ZNF738	NA	NA	NA	NA	ZNF708	4557	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	21511296	21511520	21511376	Y	NA	ZNF708,ZNF738	NA	NA	NA	NA	ZNF708	1069	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	21882044	21882358	21882227	Y	ZNF676,ZNF208	NA	NA	NA	NA	NA	ZNF100	66072	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	30336581	30336824	30336781	Y	C19orf2,C19orf2	CCNE1	NA	NA	NA	NA	CCNE1	35776	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	33668108	33668528	33668227	Y	SLC7A10,LRP3	LRP3,SLC7A10	NA	NA	NA	NA	LRP3	1599	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	34396925	34397389	34397012	Y	NA	NA	KCTD15	MCF7	ChIA-PET	22265404	KCTD15	112087	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	34625713	34625998	34625854	Y	PDCD2L	LSM14A	CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD	IMR90	Hi-C	24141950	LSM14A	35411	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	35809679	35810380	35810036	Y	GRAMD1A,FXYD5,FXYD5,FXYD5,USF2,FFAR2,U2AF1L4,IGFLR1,FFAR3	NA	NA	NA	NA	NA	USF2	51798	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	36449882	36450230	36450084	Y	NA	LRFN3,SDHAF1	NA	NA	NA	NA	LRFN3	25622	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	36748454	36748637	36748519	Y	ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF461,ZNF382,ZFP82,ZFP14,ZNF565,ZNF565	ZNF146,ZNF565	NA	NA	NA	NA	ZNF565	13295	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	37408041	37408149	37408081	Y	ZNF527,HKR1,ZFP82,ZNF566,ZNF566,ZNF529,ZNF382,ZNF461,ZNF790,ZNF345,ZNF345,ZNF345,ZNF585B,ZNF420,ZNF383,ZNF829,ZNF568	ZNF829,ZNF568	NA	NA	NA	NA	ZNF568	2810	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	38490005	38490506	38490269	Y	YIF1B,YIF1B,SPRED3,PSMD8,SIPA1L3	NA	NA	NA	NA	NA	SIPA1L3	94137	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	39175000	39175365	39175141	Y	NFKBIB,HNRNPL,EIF3K	ACTN4	NA	NA	NA	NA	ACTN4	38711	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	39755176	39755398	39755266	Y	ZFP36	NA	NA	NA	NA	NA	NCCRP1	69575	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	39894353	39894945	39894613	Y	GMFG,SAMD4B,PAF1,MED29,ZFP36,SUPT5H,SUPT5H,PLEKHG2	PAF1,MED29,ZFP36,MIR4530,PLEKHG2,RPS16,SUPT5H	NA	NA	NA	NA	ZFP36	508	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr19	41152132	41152466	41152220	Y	NA	NUMBL	NA	NA	NA	NA	NUMBL	42411	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	41681944	41682199	41682187	Y	NA	CYP2S1,AXL	CYP2B7P1,HNRNPUL1,CYP2A13,CYP2F1,CCDC97,BCKDHA,B3GNT8	IMR90	Hi-C	24141950	CYP2S1	14755	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	41729438	41729579	41729517	Y	ATP5SL,ATP5SL,AXL	CYP2S1,AXL,HNRNPUL1	NA	NA	NA	NA	AXL	6330	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr19	41771602	41771660	41771636	Y	CEACAM4,CEACAM21,RAB4B,EGLN2,EGLN2,TMEM91,TMEM91,TGFB1,B9D2,HNRNPUL1	AXL,HNRNPUL1,CCDC97	NA	NA	NA	NA	HNRNPUL1	5201	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	42028325	42028365	42028354	Y	NA	NA	CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21	IMR90	Hi-C	24141950	ATP5SL	83703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	42432096	42432209	42432128	Y	NA	ARHGEF1,RABAC1	NA	NA	NA	NA	RABAC1	29333	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	42711906	42712521	42712423	Y	CEACAM8,CEACAM3,ARHGEF1,POU2F2,DEDD2	POU2F2,DEDD2,ZNF526,GSK3A,ERF	NA	NA	NA	NA	DEDD2	9771	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	42772804	42773312	42773020	Y	CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE	GSK3A,ERF,CIC,PRR19,PAFAH1B3	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	2115	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	42775992	42776735	42776352	Y	NA	GSK3A,ERF,CIC,PRR19,PAFAH1B3	NA	NA	NA	NA	CIC	5303	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	42784527	42784991	42784716	Y	ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8	GSK3A,ERF,CIC,PRR19,PAFAH1B3,MEGF8	NA	NA	NA	NA	CIC	13838	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	43624762	43624964	43624855	Y	NA	PSG2	PSG5,PSG9	IMR90	Hi-C	24141950	PSG2	39565	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	44178912	44179361	44178991	Y	IRGQ,ZNF222,PLAUR,KCNN4,C19orf61	CADM4,PLAUR	PLAUR	MCF7	ChIA-PET	22265404	PLAUR	6213	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	44288540	44288860	44288798	Y	NA	SMG9,KCNN4,ZNF283	NA	NA	NA	NA	KCNN4	5131	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	45228436	45228775	45228695	Y	IGSF23,RELB,APOE,APOC4,APOC2,BCL3	BCL3	NA	NA	NA	NA	BCL3	20187	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	45248499	45249479	45248793	Y	NA	NA	NA	NA	NA	NA	BCL3	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	45350775	45351289	45350997	Y	BCL3,PVRL2,RELB	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	3343	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	45905744	45905944	45905844	Y	EML2,KLC3,PPP1R13L,ERCC1,ERCC1	ERCC2,CD3EAP,PPP1R13L	NA	NA	NA	NA	CD3EAP	1523	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	45945937	45946679	45946251	Y	GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1	ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2	K562,MCF7	ChIA-PET	22265404	FOSB	22574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	45946690	45947113	45946759	Y	GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1	ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2	K562,MCF7	ChIA-PET	22265404	FOSB	22140	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	45953764	45954783	45954182	Y	NA	CD3EAP,PPP1R13L,FOSB,ERCC1,RTN2	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	14470	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	46361761	46362096	46361929	Y	NA	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	SYMPK	2452	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	46854568	46854669	46854639	Y	PPP5C	PPP5C	NA	NA	NA	NA	PPP5C	6317	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	46905606	46905628	46905621	Y	NA	NA	NA	NA	NA	NA	PPP5C	57355	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	46907328	46907649	46907570	Y	NA	NA	NA	NA	NA	NA	PPP5C	59077	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	47363167	47364689	47363471	Y	PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35	AP2S1	SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1	MCF7,K562	ChIA-PET	22265404	AP2S1	10918	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	47487878	47488175	47487946	Y	ZC3H4,DHX34,CCDC9,C5AR1	NPAS1	NPAS1	IMR90	Hi-C	24141950	NPAS1	32902	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	47552678	47552827	47552750	Y	NA	NPAS1,TMEM160	NA	NA	NA	NA	TMEM160	2790	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	48103581	48103982	48103689	Y	GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1	NA	GLTSCR1,NAPA	MCF7	ChIA-PET	22265404	NAPA	87084	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	48903013	48903207	48903134	Y	PPP1R15A,EMP3,FUT1,IZUMO1	TMEM143,KDELR1,GRWD1	NA	NA	NA	NA	KDELR1	10203	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	48903450	48903602	48903513	Y	NA	TMEM143,KDELR1,GRWD1	NA	NA	NA	NA	KDELR1	10640	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	49465555	49466264	49465736	Y	IZUMO1,PPP1R15A,CD37,FTL	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	294	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	49466802	49467527	49467169	Y	IZUMO1,PPP1R15A,CD37,FTL	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	244	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	49495555	49495708	49495609	Y	SPHK2,SPHK2,BCAT2,NUCB1,TRPM4	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	RUVBL2	850	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	49924099	49924476	49924276	Y	TBC1D17,RRAS,RCN3,PRR12,NOSIP,AP2A1	SLC17A7,ALDH16A1,PIH1D1	NA	NA	NA	NA	SLC17A7	19141	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr19	50116585	50116794	50116665	Y	NA	NOSIP,PRR12,RRAS,SCAF1	NA	NA	NA	NA	PRR12	23685	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	50872495	50872846	50872654	Y	NA	NR1H2,KCNC3,POLD1,SPIB	NA	NA	NA	NA	POLD1	12615	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	50990086	50990332	50990328	Y	NA	JOSD2	NA	NA	NA	NA	JOSD2	22278	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	51339255	51339614	51339393	Y	KLK14,IGLON5,LRRC4B,SYT3,SYT3	C19orf48	NA	NA	NA	NA	C19orf48	33069	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	52192085	52192767	52192400	Y	ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577	NA	NA	NA	NA	NA	ZNF649	213526	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	52996616	52996734	52996658	Y	NA	ZNF578,ZNF808	NA	NA	NA	NA	ZNF808	32171	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	53129559	53129725	53129643	Y	ZNF160,ZNF616,ZNF766,ZNF808,ZNF701,ZNF611,ZNF611,ZNF83	NA	NA	NA	NA	NA	ZNF83	62024	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	53426305	53426488	53426354	Y	ZNF765,ZNF468,ZNF816	ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	17366	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	53449736	53449992	53449814	Y	ZNF665,ZNF415,ZNF415,ZNF347,ZNF347,ZNF83	ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	5882	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	53727403	53727861	53727738	Y	NA	ZNF665,ZNF677	NA	NA	NA	NA	ZNF677	28290	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr19	54048513	54048640	54048574	Y	NA	NA	NA	NA	NA	NA	ZNF813	79524	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	54465243	54465494	54465291	Y	TFPT,PRPF31,NDUFA3,MYADM,CACNG7,CACNG8	NA	NA	NA	NA	NA	PRKCG	84799	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr19	55988531	55988605	55988568	Y	NAT14	ISOC2,ZNF628,NAT14	NA	NA	NA	NA	ZNF628	2832	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	56064106	56064277	56064192	Y	ZNF579	ZNF579,ZNF524,FIZ1	NA	NA	NA	NA	ZNF579	25934	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr19	56116208	56117068	56116734	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	4872	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr19	57980425	57980680	57980553	Y	NA	ZNF749,ZNF772,ZNF419,ZNF773	NA	NA	NA	NA	ZNF772	6258	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr19	58912594	58912944	58912773	Y	ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324	A1BG,RPS5,ZNF584,ZNF132,ZNF324B	NA	NA	NA	NA	ZNF584	1723	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	289560	289860	289743	Y	SH3YL1,FAM150B	ACP1,SH3YL1	NA	NA	NA	NA	SH3YL1	25162	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	739928	740199	740059	Y	NA	NA	TMEM18	MCF7	ChIA-PET	22265404	TMEM18	64489	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	1725053	1725311	1725239	Y	NA	NA	NA	NA	NA	NA	TMEM18	1049614	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	2617084	2617480	2617333	Y	NA	NA	NA	NA	NA	NA	TSSC1	762173	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	9374844	9375591	9375054	Y	YWHAQ,ASAP2	ASAP2	NA	NA	NA	NA	ASAP2	29950	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr2	9427801	9428115	9428020	Y	YWHAQ,ITGB1BP1,ASAP2	NA	NA	NA	NA	NA	ASAP2	82907	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	9686288	9686554	9686518	Y	NA	ADAM17	NA	NA	NA	NA	ADAM17	7367	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	9688603	9688902	9688848	Y	ADAM17	ADAM17	NA	NA	NA	NA	ADAM17	5019	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	9830441	9830702	9830552	Y	KLF11,KLF11	NA	YWHAQ,ADAM17	IMR90	Hi-C	24141950	YWHAQ	61298	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	10258344	10258406	10258377	Y	NA	CYS1,RRM2	NA	NA	NA	NA	RRM2	2049	CAGE	RERF-LC-AI	hg19	FANTOM5	3.63864103240756
chr2	10423423	10423670	10423576	Y	NA	HPCAL1	RRM2,GRHL1,NOL10,HPCAL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HPCAL1	17345	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	10430004	10430228	10430116	Y	NA	HPCAL1	HPCAL1,C2orf48,CYS1,RRM2,MIR4261,ODC1,NOL10	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HPCAL1	10787	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	11623044	11623914	11623865	Y	NA	E2F6	GREB1,NTSR2,FLJ33534,C2orf50,MIR4429,ROCK2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	E2F6	18747	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	12596433	12596805	12596535	Y	NA	NA	LPIN1	IMR90	Hi-C	24141950	TRIB2	258210	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	21575338	21575411	21575375	Y	NA	NA	NA	NA	NA	NA	AC067959.1	133291	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	27304052	27304486	27304234	Y	CENPA,CENPA,DPYSL5,SLC5A6,PPM1G,GTF3C2,CAD,CGREF1	AGBL5,OST4	NA	NA	NA	NA	OST4	11411	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	28215985	28216067	28216026	Y	NA	NA	NA	NA	NA	NA	RBKS	104020	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	28806831	28807046	28806964	Y	FOSL2	NA	NA	NA	NA	NA	PPP1CB	165460	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	29026080	29026331	29026243	Y	FOSL2,PPP1CB,PPP1CB	NA	NA	NA	NA	NA	PPP1CB	53574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	29331222	29331429	29331307	Y	NA	CLIP4	CLIP4	MCF7	ChIA-PET	22265404	CLIP4	12651	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	29803354	29803753	29803678	Y	ALK	NA	NA	NA	NA	NA	ALK	338679	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	35217351	35217720	35217534	Y	NA	NA	NA	NA	NA	NA	CRIM1	1363349	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	36584242	36585529	36584872	Y	FEZ2,CRIM1	CRIM1	NA	NA	NA	NA	CRIM1	3173	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr2	36712578	36712925	36712822	Y	CRIM1,FEZ2	NA	NA	NA	NA	NA	CRIM1	131509	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	36795570	36795942	36795825	Y	FEZ2	NA	NA	NA	NA	NA	FEZ2	75288	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	37880894	37881162	37881056	Y	EIF2AK2,QPCT,CYP1B1,CDC42EP3	NA	NA	NA	NA	NA	CDC42EP3	82449	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	37938546	37938819	37938725	Y	NA	CDC42EP3	CDC42EP3	IMR90	Hi-C	24141950	CDC42EP3	24792	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	38003710	38004005	38003838	Y	NA	CDC42EP3	CDC42EP3,PRKD3,QPCT	IMR90	Hi-C	24141950	CDC42EP3	40099	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	38265039	38265434	38265056	Y	CDC42EP3,CYP1B1	NA	NA	NA	NA	NA	CYP1B1	69610	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	38949741	38950194	38950072	Y	HNRPLL,SRSF7	SRSF7,GEMIN6	NA	NA	NA	NA	SRSF7	26442	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	42481657	42481775	42481735	Y	EML4	NA	NA	NA	NA	NA	EML4	87167	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	43020336	43020977	43020619	Y	HAAO	HAAO	NA	NA	NA	NA	HAAO	2603	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	43152648	43152978	43152751	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HAAO	134915	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	43302253	43302513	43302383	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZFP36L2	149235	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	43686078	43686091	43686085	Y	NA	NA	NA	NA	NA	NA	THADA	135094	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	44007303	44007575	44007439	Y	NA	DYNC2LI1	NA	NA	NA	NA	DYNC2LI1	8125	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	45164818	45165169	45165126	Y	NA	RP11-89K21.1	NA	NA	NA	NA	RP11-89K21.1	480	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	46825586	46825695	46825639	Y	NA	CRIPT,PIGF	NA	NA	NA	NA	CRIPT	15860	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	47270774	47271231	47270943	Y	NA	NA	NA	NA	NA	NA	MCFD2	103780	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	54786900	54787386	54787056	Y	NA	NA	NA	NA	NA	NA	SPTBN1	105478	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	54787503	54787764	54787623	Y	RTN4,SPTBN1	NA	NA	NA	NA	NA	SPTBN1	106081	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	55193261	55193511	55193360	Y	NA	NA	NA	NA	NA	NA	RTN4	144246	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	55450545	55450658	55450592	Y	CCDC88A,EML6,RTN4	RPS27A,MTIF2	NA	NA	NA	NA	RPS27A	6381	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	58334895	58335527	58335141	Y	VRK2,VRK2,VRK2	NA	NA	NA	NA	NA	FANCL	130980	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	60228228	60228402	60228315	Y	NA	NA	NA	NA	NA	NA	RNU1-32P	381338	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	60962204	60962802	60962781	Y	NA	PAPOLG	NA	NA	NA	NA	PAPOLG	18563	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	61766465	61766637	61766569	Y	AHSA2,USP34	XPO1	NA	NA	NA	NA	XPO1	2704	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	61991278	61991660	61991557	Y	NA	NA	XPO1,FAM161A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM161A	87618	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	64175541	64175571	64175556	Y	NA	NA	NA	NA	NA	NA	VPS54	68635	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	64994926	64995226	64995021	Y	SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2	SERTAD2	SERTAD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	18787	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	65065938	65066285	65066136	Y	AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2	NA	SERTAD2,LOC339807,AFTPH	IMR90	Hi-C	24141950	SERTAD2	89799	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	65085914	65086269	65086077	Y	AFTPH,SERTAD2,RAB1A,ACTR2	NA	SERTAD2,LOC339807,AFTPH	IMR90	Hi-C	24141950	SERTAD2	109775	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	65086968	65087262	65087080	Y	AFTPH,SERTAD2,RAB1A,ACTR2	NA	SERTAD2,LOC339807,AFTPH	IMR90	Hi-C	24141950	SERTAD2	110829	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	65214378	65214996	65214823	Y	NA	SLC1A4	NA	NA	NA	NA	SLC1A4	767	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	70335985	70336314	70336204	Y	AAK1,C2orf42,PCBP1	PCBP1,PCBP1-AS1,AC016700.4	NA	NA	NA	NA	AC016700.4	8302	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	71725442	71725771	71725690	Y	DYSF	DYSF	NA	NA	NA	NA	DYSF	46590	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	71944095	71944430	71944253	Y	NA	NA	DYSF	IMR90	Hi-C	24141950	DYSF	265243	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	72372444	72372716	72372574	Y	CYP26B1	NA	NA	NA	NA	NA	EXOC6B	678454	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	73402910	73403369	73403123	Y	SFXN5	RAB11FIP5,SMYD5	EMX1,RAB11FIP5,SFXN5,NOTO,PRADC1,CCT7,SMYD5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RAB11FIP5	21061	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	75114636	75114786	75114714	Y	NA	AC104135.3	NA	NA	NA	NA	AC104135.3	28489	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	82212744	82213103	82212921	Y	NA	NA	NA	NA	NA	NA	SUCLG1	2472066	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	91815672	91815808	91815787	Y	NA	AC116050.1	NA	NA	NA	NA	AC116050.1	40136	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	91845288	91845519	91845445	Y	NA	NA	NA	NA	NA	NA	AC116050.1	69752	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	91954549	91954973	91954634	Y	NA	NA	NA	NA	NA	NA	AC116050.1	179013	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr2	95740471	95740890	95740482	Y	NA	NA	NA	NA	NA	NA	MRPS5	72289	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	95982487	95982780	95982632	Y	TRIM43B,KCNIP3	KCNIP3	NA	NA	NA	NA	KCNIP3	21435	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	95982962	95983225	95982998	Y	PROM2	KCNIP3	NA	NA	NA	NA	KCNIP3	21910	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	96190968	96191044	96191006	Y	NA	NA	NA	NA	NA	NA	FAHD2A	124499	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	96198442	96198677	96198560	Y	NA	NA	NA	NA	NA	NA	FAHD2A	131973	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	96782666	96782871	96782861	Y	NA	DUSP2	NA	NA	NA	NA	DUSP2	26308	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	98465985	98466159	98466067	Y	NA	NA	NA	NA	NA	NA	TMEM131	144229	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	98485830	98486136	98485916	Y	NA	NA	NA	NA	NA	NA	TMEM131	124252	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	99452356	99452772	99452668	Y	TSGA10,LIPT1,LIPT1,INPP4A,MGAT4A,MGAT4A	NA	NA	NA	NA	NA	MGAT4A	106767	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	101010496	101010959	101010820	Y	AFF3	CHST10	NA	NA	NA	NA	CHST10	21159	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	101435496	101435968	101435616	Y	NPAS2	NPAS2	NA	NA	NA	NA	NPAS2	882	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	106009982	106010344	106010250	Y	FHL2,FHL2	FHL2	NA	NA	NA	NA	FHL2	42626	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	106545066	106545218	106545146	Y	NA	NA	LOC285000	IMR90	Hi-C	24141950	NCK2	185712	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	109706111	109706459	109706286	Y	NA	NA	EDAR,SEPT10,SH3RF3,LOC100287216	IMR90	Hi-C	24141950	CCDC138	304898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	110859077	110859497	110859213	Y	NA	MALL	NA	NA	NA	NA	MALL	12646	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	112253383	112253436	112253410	Y	NA	NA	NA	NA	NA	NA	BCL2L11	378428	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	112417011	112417329	112417184	Y	NA	NA	BCL2L11,ACOXL	IMR90	Hi-C	24141950	ANAPC1	222938	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	113556767	113557612	113557074	Y	IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B	CKAP2L,IL1A,IL1B	IL37,CKAP2L,CHCHD5,IL1A,IL1B	IMR90	Hi-C	24141950	IL1A	16600	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	114082449	114082815	114082523	Y	NA	NA	PAX8,LOC654433	IMR90	Hi-C	24141950	RP11-395L14.5	214699	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr2	114672841	114673224	114672915	Y	NA	ACTR3	NA	NA	NA	NA	ACTR3	27304	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	121624920	121625080	121625001	Y	NA	NA	NA	NA	NA	NA	GLI2	133721	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr2	122480192	122480543	122480332	Y	NA	TSN	NA	NA	NA	NA	TSN	12136	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	122656153	122656341	122656293	Y	NA	NA	NA	NA	NA	NA	TSN	163474	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	133914495	133914622	133914567	Y	NCKAP5	NA	NA	NA	NA	NA	LYPD1	487343	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	135701216	135701448	135701313	Y	NA	CCNT2,CCNT2-AS1	NA	NA	NA	NA	CCNT2-AS1	26936	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	136632932	136633416	136633308	Y	UBXN4,CXCR4,CXCR4	MCM6	NA	NA	NA	NA	MCM6	936	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	136901637	136901923	136901777	Y	UBXN4,CXCR4,CXCR4	CXCR4	NA	NA	NA	NA	CXCR4	27902	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	153263916	153264284	153263950	Y	NA	NA	NA	NA	NA	NA	FMNL2	74165	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	154333342	154333495	154333419	Y	RPRM	NA	NA	NA	NA	NA	GALNT13	392931	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	157147606	157147983	157147795	Y	NA	NR4A2	NA	NA	NA	NA	NR4A2	48877	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	159354074	159354382	159354127	Y	NA	PKP4	NA	NA	NA	NA	PKP4	42598	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	160106082	160106269	160106215	Y	MARCH7	WDSUB1	NA	NA	NA	NA	WDSUB1	35041	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	161064664	161064880	161064794	Y	NA	NA	ITGB6,RBMS1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PLA2R1	147543	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	161098241	161098623	161098428	Y	ITGB6	NA	TANK,ITGB6,RBMS1	IMR90	Hi-C	24141950	MIR4785	163770	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	161607616	161608069	161607675	Y	TANK,TANK	NA	RBMS1,ITGB6	IMR90	Hi-C	24141950	RBMS1	259311	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	162197345	162197490	162197464	Y	NA	PSMD14,AC009299.5	NA	NA	NA	NA	AC009299.5	1508	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	164204698	164204962	164204800	Y	NA	NA	FIGN	IMR90	Hi-C	24141950	FIGN	385560	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	164518951	164519177	164519064	Y	FIGN	NA	NA	NA	NA	NA	FIGN	71345	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	168911148	168911462	168911308	Y	NA	NA	NA	NA	NA	NA	STK39	191189	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	170684911	170685465	170685124	Y	PPIG,C2orf77,PHOSPHO2,UBR3	SSB,METTL5,UBR3	NA	NA	NA	NA	UBR3	2943	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	172959536	172959659	172959591	Y	DLX1,DLX2	DLX2	NA	NA	NA	NA	DLX2	5969	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	172960097	172960530	172960322	Y	DLX1,DLX2	DLX2	NA	NA	NA	NA	DLX2	5098	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	175837054	175837318	175837218	Y	NA	NA	NA	NA	NA	NA	MIR933	193119	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	176839402	176839757	176839580	Y	NA	KIAA1715	NA	NA	NA	NA	KIAA1715	25810	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	177426339	177426739	177426504	Y	NA	NA	HOXD-AS2,HOXD8,MIR10B,HOXD9,HOXD4,HOXD3,HOXD-AS1,HOXD1,LOC375295	IMR90	Hi-C	24141950	LINC01117	73699	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	188326523	188326725	188326579	Y	NA	NA	NA	NA	NA	NA	TFPI	101762	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr2	188389811	188390126	188390006	Y	NA	TFPI	NA	NA	NA	NA	TFPI	38361	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	189194773	189194794	189194784	Y	NA	GULP1	NA	NA	NA	NA	GULP1	40377	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	191275066	191275314	191275106	Y	NA	MFSD6	NA	NA	NA	NA	MFSD6	3985	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	192066963	192067214	192067088	Y	STAT4,MYO1B,MYO1B	MYO1B	MYO1B,STAT4	IMR90	Hi-C	24141950	MYO1B	40697	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	192436242	192436430	192436383	Y	OBFC2A	NA	TMEFF2,OBFC2A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC098617.1	272835	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	192544982	192545232	192545125	Y	OBFC2A	NA	NA	NA	NA	NA	AC098617.1	164033	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	197023417	197023933	197023871	Y	NA	STK17B	NA	NA	NA	NA	STK17B	15294	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	201273148	201273356	201273255	Y	CLK1,CLK1,BZW1,BZW1,BZW1	NA	NA	NA	NA	NA	SGOL2	99375	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	202898182	202898685	202898353	Y	TMEM237,FZD7	FZD7	NA	NA	NA	NA	FZD7	872	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	203239784	203239912	203239798	Y	NA	BMPR2	NA	NA	NA	NA	BMPR2	125	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	204311629	204311925	204311741	Y	NBEAL1,CYP20A1,ABI2	NA	NA	NA	NA	NA	RAPH1	86208	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	204499475	204499823	204499577	Y	NA	NA	ABI2,RAPH1	IMR90	Hi-C	24141950	RAPH1	101342	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	204668913	204669218	204669026	Y	NA	NA	RAPH1,CD28,ABI2	IMR90	Hi-C	24141950	RAPH1	270780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	204680113	204680267	204680190	Y	NA	NA	RAPH1,NBEAL1,CYP20A1,ABI2	IMR90	Hi-C	24141950	RAPH1	281980	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	205530118	205530314	205530216	Y	NA	NA	NA	NA	NA	NA	PARD3B	121602	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	206935678	206936046	206935862	Y	NA	AC007383.3,INO80D	NA	NA	NA	NA	AC007383.3	11283	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	208027980	208028625	208028335	Y	CREB1,KLF7	KLF7	NA	NA	NA	NA	KLF7	1366	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	208198821	208199856	208199157	Y	KLF7	NA	KLF7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC007879.7	96447	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	208348288	208348659	208348648	Y	NA	CREB1,AC007879.5	KLF7,CCNYL1,FASTKD2,METTL21A,CREB1,FZD5	IMR90	Hi-C	24141950	CREB1	43802	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	208395422	208395980	208395659	Y	PLEKHM3,METTL21A,METTL21A,CREB1	CREB1,AC007879.5	NA	NA	NA	NA	AC007879.5	2903	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	208472249	208472458	208472354	Y	NA	METTL21A	NA	NA	NA	NA	METTL21A	16194	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	214053041	214053239	214053088	Y	NA	IKZF2	NA	NA	NA	NA	IKZF2	37890	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	214053816	214053901	214053846	Y	NA	IKZF2	IKZF2	IMR90	Hi-C	24141950	IKZF2	38665	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	216224117	216224404	216224261	Y	NA	ATIC	NA	NA	NA	NA	ATIC	49577	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	217181584	217181763	217181674	Y	NA	NA	NA	NA	NA	NA	MARCH4	52987	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	217400220	217400574	217400443	Y	NA	RPL37A,AC098820.3	DIRC3,XRCC5,IGFBP2	IMR90	Hi-C	24141950	AC098820.3	38736	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	218088198	218088590	218088283	Y	NA	NA	DIRC3,IGFBP5,IGFBP2	IMR90	Hi-C	24141950	IGFBP2	592647	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr2	218142226	218142611	218142295	Y	NA	NA	NA	NA	NA	NA	IGFBP2	646675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	218793134	218793717	218793417	Y	TMBIM1,SLC11A1,PNKD,ARPC2,ARPC2	NA	NA	NA	NA	NA	HMGB1P9	269440	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	219596297	219596622	219596516	Y	TMBIM1,PNKD,SLC11A1,USP37,TTLL4,CYP27A1	TTLL4,CYP27A1	NA	NA	NA	NA	TTLL4	22729	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	219773515	219774011	219773826	Y	USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A	CDK5R2	NA	NA	NA	NA	CDK5R2	48366	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	222305020	222305156	222305087	Y	NA	NA	NA	NA	NA	NA	EPHA4	131766	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	222435699	222436339	222436058	Y	EPHA4	EPHA4	NA	NA	NA	NA	EPHA4	583	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	222826690	222827411	222827014	Y	NA	NA	EPHA4	IMR90	Hi-C	24141950	EPHA4	389768	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	224477772	224478078	224477872	Y	NA	SCG2	AP1S3,KCNE4,SCG2	IMR90	Hi-C	24141950	SCG2	12551	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	225841174	225841410	225841405	Y	NA	NA	NA	NA	NA	NA	DOCK10	63752	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	227292366	227292516	227292441	Y	NA	NA	IRS1,LOC646736,RHBDD1	IMR90	Hi-C	24141950	IRS1	369959	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	227517160	227517436	227517301	Y	IRS1	NA	IRS1,LOC646736	IMR90	Hi-C	24141950	IRS1	145039	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	227526564	227526855	227526789	Y	IRS1	NA	IRS1,LOC646736	IMR90	Hi-C	24141950	IRS1	135620	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	227656309	227656561	227656437	Y	NA	IRS1,RHBDD1	NA	NA	NA	NA	IRS1	5914	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	228742760	228743014	228742884	Y	WDR69	NA	NA	NA	NA	NA	CCL20	66202	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	231838825	231839283	231839059	Y	NA	NA	NA	NA	NA	NA	PSMD1	80295	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	231901045	231901225	231901135	Y	NA	PSMD1	NA	NA	NA	NA	PSMD1	18353	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	232046537	232047112	232046768	Y	NA	ARMC9	NA	NA	NA	NA	ARMC9	14148	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	232277113	232277443	232277206	Y	C2orf72	B3GNT7	NA	NA	NA	NA	B3GNT7	18859	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	232468888	232470128	232469532	Y	DIS3L2,PTMA,NMUR1	NA	NA	NA	NA	NA	LINC00471	91838	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	232478879	232479328	232479053	Y	NA	NA	NA	NA	NA	NA	PTMA	90277	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	232545684	232546083	232545868	Y	COPS7B	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	23522	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr2	232566219	232566469	232566340	Y	NA	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	3136	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	233250431	233250842	233250658	Y	NA	ALPP	NA	NA	NA	NA	ALPP	9187	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	233279498	233279714	233279606	Y	NA	ALPP	NA	NA	NA	NA	ALPP	38254	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	233283707	233283952	233283753	Y	ALPPL2	ALPP	NA	NA	NA	NA	ALPP	42463	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr2	235905010	235905389	235905297	Y	SH3BP4	SH3BP4	NA	NA	NA	NA	SH3BP4	46393	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	237073092	237073409	237073337	Y	NA	AC079135.1,GBX2	NA	NA	NA	NA	AC079135.1	681	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr2	237721989	237722187	237722088	Y	NA	NA	IQCA1,CXCR7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	COPS8	269768	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	238383141	238383356	238383272	Y	NA	MLPH	LRRFIP1,MLPH,COL6A3,RAB17,COPS8,PRLH	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MLPH	8715	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	239347857	239348510	239348285	Y	ASB1	ASB1	NA	NA	NA	NA	ASB1	14474	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	240196933	240197336	240197049	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	123794	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	240361184	240361566	240361235	Y	NA	AC062017.1,HDAC4	HDAC4,NDUFA10	IMR90	Hi-C	24141950	HDAC4	39836	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	240920223	240920529	240920311	Y	NA	NDUFA10	NA	NA	NA	NA	NDUFA10	42290	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	241309624	241309945	241309791	Y	GPC1	NA	PP14571,GPC1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GPC1	63143	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr2	241313615	241314182	241313884	Y	NA	NA	GPC1	IMR90	Hi-C	24141950	GPC1	58906	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	241373489	241373922	241373594	Y	GPC1	GPC1	NA	NA	NA	NA	GPC1	401	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	241561048	241561275	241561167	Y	DUSP28,RNPEPL1,CAPN10,GPR35	CAPN10	NA	NA	NA	NA	CAPN10	36915	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	241585712	241586190	241585819	Y	DUSP28,CAPN10,GPR35,MTERFD2	NA	NA	NA	NA	NA	CAPN10	61579	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	242262018	242262304	242262161	Y	NA	SEPT2,HDLBP,FARP2	NA	NA	NA	NA	HDLBP	7542	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr2	242833644	242833731	242833683	Y	NA	NA	NA	NA	NA	NA	D2HGDH	161650	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	1785698	1786068	1785859	Y	SIRPA,SIRPA	NA	LOC100289473,STK35	IMR90	Hi-C	24141950	SIRPA	87086	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	3779808	3780100	3779895	Y	PANK2,PANK2,CDC25B	C20orf27,CENPB,CDC25B,MAVS	NA	NA	NA	NA	CDC25B	14230	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	5046140	5046913	5046758	Y	PRNP,PRNP,RASSF2,RASSF2,SLC23A2	NA	SLC23A2,C20orf30,RASSF2,PCNA,PCNA-AS1,PRND,PRNT,CDS2	IMR90	Hi-C	24141950	SLC23A2	57201	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	7479812	7480195	7480004	Y	NA	NA	NA	NA	NA	NA	TMX4	518281	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	18686203	18686430	18686281	Y	NA	NA	NA	NA	NA	NA	DTD1	119666	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	19967147	19967464	19967305	Y	NA	NAA20	NA	NA	NA	NA	NAA20	28296	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	21417020	21417216	21417107	Y	NA	NA	XRN2	IMR90	Hi-C	24141950	XRN2	135078	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	22744166	22744500	22744407	Y	THBD	NA	THBD,NXT1,NAPB	IMR90	Hi-C	24141950	FOXA2	180073	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	23121642	23121836	23121709	Y	THBD,CD93,GZF1,CST3	NA	LOC200261	IMR90	Hi-C	24141950	NXT1	207537	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	25291624	25291957	25291812	Y	NA	NA	NA	NA	NA	NA	PYGB	64919	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	25671297	25671837	25671511	Y	NA	ZNF337	NA	NA	NA	NA	ZNF337	3640	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	30263480	30263875	30263840	Y	NA	BCL2L1	NA	NA	NA	NA	BCL2L1	45917	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	30796713	30797081	30796897	Y	NA	TSPY26P,PLAGL2,POFUT1	NA	NA	NA	NA	POFUT1	3030	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	31063072	31063625	31063366	Y	NA	NA	ASXL1	IMR90	Hi-C	24141950	C20orf112	107251	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr20	31170393	31170766	31170763	Y	NA	C20orf112	NA	NA	NA	NA	C20orf112	110	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	33064297	33064587	33064427	Y	ACSS2	DYNLRB1	NA	NA	NA	NA	DYNLRB1	37627	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	33906285	33906606	33906471	Y	GSS,EIF6,EIF6	EDEM2,EIF6	FAM83C,EIF6	HELA	5C	22955621	EIF6	35497	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	34217204	34217560	34217502	Y	NA	SPAG4,CPNE1,RBM12	NA	NA	NA	NA	SPAG4	15390	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	34303643	34304038	34303890	Y	NA	ROMO1,NFS1,RBM39	NA	NA	NA	NA	NFS1	18362	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr20	35362274	35362463	35362369	Y	NA	NDRG3,DSN1	NA	NA	NA	NA	NDRG3	10018	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	36763112	36763416	36763201	Y	NA	TGM2	NA	NA	NA	NA	TGM2	29564	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	36831796	36832119	36831958	Y	NA	TGM2	NA	NA	NA	NA	TGM2	38816	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	37678805	37678873	37678867	Y	SLC32A1,PPP1R16B	NA	NA	NA	NA	NA	DHX35	89863	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	39785946	39786458	39785968	Y	CHD6,PLCG1	PLCG1	NA	NA	NA	NA	PLCG1	22346	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	39826598	39826945	39826630	Y	CHD6	NA	NA	NA	NA	NA	PLCG1	62998	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	42286061	42286420	42286177	Y	SRSF6,L3MBTL1,MYBL2	RPL27AP,MYBL2	MYBL2	IMR90	Hi-C	24141950	RPL27AP	6898	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr20	42554497	42554746	42554685	Y	IFT52,TOX2	NA	NA	NA	NA	NA	JPH2	259472	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	43970100	43970351	43970215	Y	NA	SDC4,SYS1,SYS1-DBNDD2	NA	NA	NA	NA	SDC4	4713	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	45825158	45825275	45825178	Y	NA	NA	NA	NA	NA	NA	RP5-1050K3.3	126654	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	45987479	45988292	45987961	Y	NA	ZMYND8	ZMYND8,LOC100131496,NCOA3	IMR90	Hi-C	24141950	ZMYND8	3912	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	45989347	45989834	45989660	Y	SULF2	ZMYND8	ZMYND8,LOC100131496,NCOA3	IMR90	Hi-C	24141950	ZMYND8	5780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	46653872	46653986	46653882	Y	NA	NA	SULF2	MCF7	ChIA-PET	22265404	NCOA3	525271	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr20	47750965	47751079	47750977	Y	ZNFX1	NA	NA	NA	NA	NA	STAU1	51825	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	47961628	47961789	47961714	Y	NA	NA	B4GALT5	IMR90	Hi-C	24141950	ZNFX1	68665	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	48315836	48316073	48315912	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5	NA	NA	NA	NA	B4GALT5	12342	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	49055532	49055924	49055757	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTPN1	68967	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr20	49100027	49100544	49100221	Y	TMEM189,CEBPB,PTPN1	PTPN1	LOC284751,TMEM189-UBE2V1,MIR645,FAM65C,PTPN1,PARD6B,UBE2V1,SNAI1,CEBPB	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTPN1	24347	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	49133154	49133451	49133362	Y	CEBPB,PTPN1	PTPN1	NA	NA	NA	NA	PTPN1	8263	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	49378032	49378227	49378094	Y	PARD6B,BCAS4	PARD6B,BCAS4	NA	NA	NA	NA	BCAS4	31204	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	49407275	49407470	49407371	Y	MOCS3	BCAS4	ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3	MCF7,K562	ChIA-PET	22265404	BCAS4	1961	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr20	49582344	49582455	49582393	Y	NA	ADNP,DPM1,MOCS3	NA	NA	NA	NA	MOCS3	8981	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	49976918	49977375	49977162	Y	NFATC2	NA	NA	NA	NA	NA	NFATC2	199995	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	49982609	49983533	49983215	Y	KCNG1	NA	NA	NA	NA	NA	NFATC2	193837	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	50252715	50253081	50252915	Y	NA	NA	NA	NA	NA	NA	NFATC2	75345	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr20	50366772	50367203	50366881	Y	ZFP64,ATP9A	ATP9A	NA	NA	NA	NA	ATP9A	15970	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52239995	52240318	52240062	Y	ZNF217	ZNF217	SUMO1P1,BMP7,BCAS1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF217	15549	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52355086	52355238	52355182	Y	NA	NA	ZNF217,BCAS1	IMR90	Hi-C	24141950	ZNF217	130640	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52364781	52365137	52364834	Y	NA	NA	ZNF217,BCAS1,SUMO1P1,BMP7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF217	140335	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52390351	52390640	52390407	Y	NA	NA	ZNF217,BCAS1,SUMO1P1	IMR90	Hi-C	24141950	ZNF217	165905	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52391089	52391563	52391364	Y	NA	NA	ZNF217,BCAS1,SUMO1P1	IMR90	Hi-C	24141950	ZNF217	166643	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr20	52445816	52446339	52446069	Y	ZNF217	NA	ZNF217,BCAS1,BMP7,SUMO1P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF217	221370	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr20	52533564	52534521	52533763	Y	ZNF217	NA	SUMO1P1,BMP7,ZNF217	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CYP24A1	253991	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52753645	52754029	52753762	Y	NA	CYP24A1	NA	NA	NA	NA	CYP24A1	34483	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	52784442	52785020	52784595	Y	PFDN4	CYP24A1,PFDN4	NA	NA	NA	NA	CYP24A1	3492	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr20	54997703	54998108	54997901	Y	NA	AURKA,CSTF1	NA	NA	NA	NA	CSTF1	32276	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	56255217	56255759	56255498	Y	ZBP1,PMEPA1	PMEPA1	NA	NA	NA	NA	PMEPA1	28833	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	58885670	58885801	58885736	Y	NA	NA	NA	NA	NA	NA	C20orf197	256690	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	60095984	60096281	60096088	Y	CDH4	NA	NA	NA	NA	NA	TAF4	542585	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	60933408	60933760	60933692	Y	NA	LAMA5,RPS21,CABLES2	ADRM1	K562	ChIA-PET	22265404	LAMA5	6608	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	60934143	60934390	60934309	Y	TAF4,PSMA7,SS18L1,RPS21,NTSR1,CABLES2,C20orf20,C20orf151,ADRM1,LAMA5	LAMA5,RPS21,CABLES2	ADRM1	K562	ChIA-PET	22265404	LAMA5	5978	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	61371540	61371927	61371747	Y	DPH3P1,DIDO1,OGFR	NTSR1	NA	NA	NA	NA	NTSR1	33351	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	61425509	61425950	61425706	Y	DPH3P1,DIDO1,OGFR	OGFR,COL9A3,DPH3P1	NA	NA	NA	NA	OGFR	8237	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	61506279	61506510	61506352	Y	BHLHE23,TCFL5,DIDO1,C20orf11	DPH3P1,TCFL5	TCFL5	MCF7,K562	ChIA-PET	22265404	TCFL5	15164	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	61554875	61554902	61554887	Y	DIDO1	DIDO1,SLC17A9	NA	NA	NA	NA	DIDO1	12402	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	61560348	61560848	61560731	Y	NA	DIDO1,SLC17A9	NA	NA	NA	NA	DIDO1	6456	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr20	62494990	62495823	62495679	Y	NA	TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	TPD52L2	394	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr20	62887659	62888425	62887862	Y	SAMD10,PCMTD2	PCMTD2	NA	NA	NA	NA	PCMTD2	2565	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	16368229	16368687	16368553	Y	NRIP1	NA	NA	NA	NA	NA	NRIP1	66634	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr21	17681993	17682347	17682285	Y	NA	NA	NA	NA	NA	NA	USP25	581649	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	17960667	17961305	17960883	Y	NA	NA	NA	NA	NA	NA	USP25	860323	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	18984370	18984546	18984496	Y	NA	BTG3	NA	NA	NA	NA	BTG3	1105	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	26962945	26963646	26963455	Y	NA	MIR155HG,MRPL39,JAM2	NA	NA	NA	NA	MRPL39	14183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	27335144	27335525	27335335	Y	APP	NA	NA	NA	NA	NA	APP	205921	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	27370700	27370785	27370725	Y	NA	NA	NA	NA	NA	NA	APP	170661	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	30374865	30375265	30375125	Y	C21orf7,N6AMT1,LTN1,USP16	LTN1,RPL23P2,RWDD2B,USP16	LTN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL23P2	6511	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	30567933	30569654	30568878	Y	USP16,BACH1,BACH1	U3,BACH1	NA	NA	NA	NA	BACH1	3541	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	31029045	31029571	31029224	Y	BACH1,BACH1	NA	NA	NA	NA	NA	BACH1	464653	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	32265922	32266021	32265970	Y	KRTAP13-4,KRTAP15-1,KRTAP19-4,KRTAP6-3,KRTAP21-3	NA	NA	NA	NA	NA	KRTAP7-1	65844	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr21	34755296	34756154	34755534	Y	IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2	IFNGR2	IFNGR2	MCF7	ChIA-PET	22265404	IFNGR2	17048	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	35917479	35917977	35917777	Y	KCNE1,RUNX1	NA	NA	NA	NA	NA	RCAN1	67464	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	36254204	36254725	36254297	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	268763	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	37485408	37485566	37485491	Y	NA	CBR1,SETD4,AP000688.29,CBR3,DOPEY2	NA	NA	NA	NA	AP000688.29	10229	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	38074425	38074708	38074699	Y	NA	SIM2	HLCS	IMR90	Hi-C	24141950	SIM2	4992	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	38232574	38232719	38232637	Y	NA	NA	NA	NA	NA	NA	AP000704.5	104093	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	38282263	38282520	38282368	Y	CLDN14	NA	NA	NA	NA	NA	AP000704.5	54292	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	38935728	38936411	38936235	Y	TTC3,DYRK1A,DYRK1A	NA	DSCR3,DSCR9,DYRK1A,KCNJ6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DYRK1A	199636	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr21	39619401	39619932	39619765	Y	KCNJ15,KCNJ15,KCNJ15	NA	KCNJ6,KCNJ15,DSCR10	IMR90	Hi-C	24141950	KCNJ15	92273	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	39638764	39638897	39638765	Y	NA	NA	NA	NA	NA	NA	KCNJ15	111636	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	39696232	39696607	39696353	Y	NA	NA	KCNJ6,DSCR10,KCNJ15,DSCR8	IMR90	Hi-C	24141950	KCNJ15	169104	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	39722623	39722941	39722785	Y	ETS2	NA	NA	NA	NA	NA	KCNJ15	195495	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	39810382	39810731	39810524	Y	ERG	NA	NA	NA	NA	NA	ERG	220973	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	39866663	39867062	39866792	Y	NA	NA	NA	NA	NA	NA	ERG	164642	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	40011652	40011749	40011697	Y	NA	ERG	NA	NA	NA	NA	ERG	19955	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	43331076	43331447	43331406	Y	NA	PRDM15,C2CD2	NA	NA	NA	NA	PRDM15	33485	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	43518001	43518239	43518148	Y	ZNF295,ABCG1,ABCG1,ABCG1,ABCG1	NA	NA	NA	NA	NA	C2CD2	146002	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	44582937	44583304	44583126	Y	NA	NA	HSF2BP,LINC00313,U2AF1	IMR90	Hi-C	24141950	U2AF1	57240	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	44599156	44599262	44599209	Y	NA	NA	NA	NA	NA	NA	U2AF1	73459	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	44816664	44817004	44816885	Y	NA	SIK1	NA	NA	NA	NA	SIK1	28004	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr21	44914466	44914931	44914660	Y	PDXK,U2AF1,SIK1	NA	CRYAA,SIK1,HSF2BP,RRP1B,LINC00313	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	H2BFS	68139	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr21	44918002	44918401	44918083	Y	NA	NA	CRYAA,SIK1,HSF2BP,RRP1B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	H2BFS	64669	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr21	45020604	45020960	45020754	Y	NA	H2BFS	NA	NA	NA	NA	H2BFS	37534	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr21	45029471	45029828	45029593	Y	PDXK	H2BFS,HSF2BP,RRP1B	NA	NA	NA	NA	H2BFS	46401	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	45080522	45080871	45080626	Y	TRAPPC10,PWP2,SIK1,RRP1B	HSF2BP,RRP1B	NA	NA	NA	NA	RRP1B	3093	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	45132062	45132504	45132250	Y	HSF2BP,PDXK	PDXK	NA	NA	NA	NA	PDXK	4471	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	46124045	46124372	46124063	Y	DNMT3L,AIRE,AIRE,TSPEAR	NA	NA	NA	NA	NA	UBE2G2	95562	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	46470710	46471152	46470922	Y	NA	ADARB1	NA	NA	NA	NA	ADARB1	20616	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	46737459	46737695	46737585	Y	COL18A1	POFUT2	COL18A1	MCF7	ChIA-PET	22265404	POFUT2	31646	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	46740711	46740979	46740801	Y	NA	POFUT2	COL18A1	MCF7	ChIA-PET	22265404	POFUT2	34898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	46783934	46784395	46784118	Y	NA	COL18A1	ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	COL18A1	38657	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr21	46823895	46824295	46824014	Y	COL18A1	COL18A1	NA	NA	NA	NA	COL18A1	843	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr21	47395087	47395227	47395108	Y	COL6A2,COL6A1	COL6A1	COL6A1	K562	ChIA-PET	22265404	COL6A1	4424	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	17091097	17091180	17091141	Y	IL17RA	FABP5P11,TPTEP1	NA	NA	NA	NA	TPTEP1	10320	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	17652206	17652871	17652785	Y	NA	CECR5,AC005300.5	NA	NA	NA	NA	CECR5	8029	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	17849400	17850329	17849515	Y	NA	NA	NA	NA	NA	NA	AC005300.5	177574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	19159081	19159242	19159165	Y	NA	DGCR14,SLC25A1	NA	NA	NA	NA	SLC25A1	5101	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr22	20287043	20287283	20287165	Y	NA	RTN4R,XXbac-B444P24.10,DGCR6L	NA	NA	NA	NA	XXbac-B444P24.10	1760	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	20850844	20851071	20850923	Y	PI4KA,AIFM3,AIFM3	KLHL22,MED15	NA	NA	NA	NA	MED15	2644	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	20923375	20923909	20923414	Y	THAP7,MED15	NA	NA	NA	NA	NA	MED15	75175	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr22	22011632	22012115	22011859	Y	NA	YDJC,SDF2L1,PPIL2	NA	NA	NA	NA	PPIL2	7073	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr22	22334723	22335115	22334952	Y	NA	PPM1F,TOP3B	NA	NA	NA	NA	TOP3B	98	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr22	23528251	23528416	23528284	Y	BCR	RAB36,BCR	NA	NA	NA	NA	BCR	8360	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	23863943	23864332	23864232	Y	GNAZ,RTDR1,BCR	NA	ZDHHC8P1	IMR90	Hi-C	24141950	GUSBP11	193211	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	24796747	24798216	24797446	Y	GGT1	ADORA2A	NA	NA	NA	NA	ADORA2A	13631	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	25381840	25382180	25381995	Y	NA	NA	KIAA1671	IMR90	Hi-C	24141950	SGSM1	181604	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	26150935	26151135	26151006	Y	NA	NA	NA	NA	NA	NA	ADRBK2	192119	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	27503626	27504166	27503976	Y	NA	NA	PITPNB,MIAT	IMR90	Hi-C	24141950	RP5-1172A22.1	114522	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	27511834	27512126	27511988	Y	NA	NA	PITPNB,MIAT	IMR90	Hi-C	24141950	RP5-1172A22.1	106562	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	27530003	27530818	27530508	Y	NA	NA	NA	NA	NA	NA	RP5-1172A22.1	87870	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	27872779	27873029	27872871	Y	NA	NA	PITPNB,TTC28,TTC28-AS1,MN1,MIAT	IMR90	Hi-C	24141950	RP5-1172A22.1	254091	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	29280564	29280869	29280661	Y	NA	ZNRF3	NA	NA	NA	NA	ZNRF3	2984	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	30653574	30654311	30654075	Y	RNF215,GAL3ST1	GATSL3	LIF	IMR90	Hi-C	24141950	GATSL3	29305	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	30938421	30938985	30938910	Y	LIF,OSM,TBC1D10A,CCDC157,SF3A1,DUSP18	SEC14L4,SIRPAP1	NA	NA	NA	NA	SIRPAP1	1898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	31298089	31298190	31298144	Y	NA	NA	MORC2,MORC2-AS1	IMR90	Hi-C	24141950	TUG1	66473	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	32446579	32447120	32446852	Y	NA	SC22CB-1E7.1	NA	NA	NA	NA	SC22CB-1E7.1	13102	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	32819656	32819735	32819695	Y	RFPL3,TIMP3	FBXO7	NA	NA	NA	NA	FBXO7	48928	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	33199078	33199894	33199157	Y	NA	TIMP3	NA	NA	NA	NA	TIMP3	3391	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	34263249	34263475	34263362	Y	NA	NA	NA	NA	NA	NA	TIMP3	1067562	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	35983528	35983815	35983759	Y	NA	NA	NA	NA	NA	NA	APOL6	58627	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	36727482	36728450	36727733	Y	APOL3	NA	NA	NA	NA	NA	MYH9	53613	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	36748222	36748386	36748297	Y	NA	MYH9,RP4-633O19__A.1	NA	NA	NA	NA	MYH9	33677	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	36858236	36858440	36858372	Y	MYH9	RP5-1119A7.14,TXN2,FOXRED2	NA	NA	NA	NA	RP5-1119A7.14	9245	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	37490501	37490532	37490517	Y	NA	KCTD17	NA	NA	NA	NA	KCTD17	44722	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	37638328	37638951	37638750	Y	SH3BP1,NOL12,MFNG,MFNG,LGALS2,GGA1,GGA1,NCF4,CSF2RB,RAC2,CYTH4	C1QTNF6	NA	NA	NA	NA	RAC2	0	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr22	37663226	37663580	37663275	Y	MFNG,MFNG,NCF4,RAC2	RAC2	CARD10,C1QTNF6,SSTR3,RAC2,CYTH4,ELFN2,MFNG,CDC42EP1,LGALS2	IMR90	Hi-C	24141950	RAC2	24738	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	37942978	37943343	37943114	Y	NA	CARD10,CDC42EP1	ELFN2,CYTH4,CARD10,CDC42EP1,LGALS2,GGA1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CDC42EP1	11111	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	38143248	38143734	38143618	Y	LGALS1,TRIOBP,POLR2F	NA	NA	NA	NA	NA	TRIOBP	52237	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	38572177	38572681	38572373	Y	DDX17,EIF3L,PLA2G6,PLA2G6,MAFF,MAFF	MAFF	NA	NA	NA	NA	MAFF	23208	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	38614588	38614867	38614785	Y	MICALL1,TMEM184B,TMEM184B,CSNK1E,MAFF,MAFF	MAFF	NA	NA	NA	NA	MAFF	18699	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	38857668	38857748	38857703	Y	NA	KDELR3,DDX17	KCNJ4	K562	ChIA-PET	22265404	KDELR3	4319	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	41048065	41048352	41048232	Y	EP300,MKL1	MKL1,GAPDHP37	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17359	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	41417973	41418366	41418067	Y	MKL1,EP300	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	39690	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	41809427	41810696	41809981	Y	CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF	TEF,TOB2	NA	NA	NA	NA	TOB2	30331	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	42331053	42331125	42331089	Y	SHISA8	SHISA8,TNFRSF13C,CENPM	NA	NA	NA	NA	CENPM	10043	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr22	42696920	42697075	42696965	Y	NA	NA	TCF20,NFAM1	IMR90	Hi-C	24141950	OLA1P1	193963	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	42718410	42718572	42718489	Y	NA	NA	TCF20,NFAM1	IMR90	Hi-C	24141950	RRP7A	195236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	44759236	44759683	44759589	Y	NA	NA	KIAA1644,PARVB,LINC00207,SAMM50,LINC00229	IMR90	Hi-C	24141950	LDOC1L	132495	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	45016324	45016531	45016433	Y	PARVG,PARVG,PRR5	PRR5	NA	NA	NA	NA	PRR5	46062	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	45067693	45068028	45067921	Y	NUP50,PARVG,PRR5	PRR5,PRR5-ARHGAP8,ARHGAP8	SAMM50,PARVB,LINC00229,KIAA1644	IMR90	Hi-C	24141950	PRR5	5100	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	45525658	45525880	45525792	Y	PHF21B,NUP50,NUP50	NUP50	NA	NA	NA	NA	NUP50	31842	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	45944996	45945587	45945178	Y	NA	FBLN1	NA	NA	NA	NA	FBLN1	48878	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr22	46464940	46465203	46464976	Y	NA	RP6-109B7.3,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	1169	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	46467914	46468476	46468052	Y	NA	RP6-109B7.3,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	4143	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr22	46472616	46472825	46472697	Y	NA	RP6-109B7.3,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	8845	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	46474643	46475112	46474791	Y	C22orf26	RP6-109B7.3,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	10872	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	46480881	46481264	46481017	Y	NA	RP6-109B7.3,RP6-109B7.4,MIR4763	NA	NA	NA	NA	RP6-109B7.4	17110	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	47150443	47150659	47150583	Y	CERK,TBC1D22A	CERK,TBC1D22A	CERK	MCF7	ChIA-PET	22265404	TBC1D22A	5859	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	47430319	47430671	47430495	Y	NA	NA	NA	NA	NA	NA	TBC1D22A	273801	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	49009124	49009326	49009225	Y	NA	NA	NA	NA	NA	NA	BRD1	1209834	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	49765184	49765573	49765231	Y	NA	NA	NA	NA	NA	NA	BRD1	453587	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	49768624	49768992	49768711	Y	NA	NA	NA	NA	NA	NA	BRD1	450168	CAGE	RERF-LC-AI	hg19	FANTOM5	16.1717379218114
chr22	49769098	49769971	49769308	Y	NA	NA	NA	NA	NA	NA	BRD1	449189	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	49816245	49816581	49816422	Y	NA	NA	NA	NA	NA	NA	BRD1	402579	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	50242140	50242406	50242374	Y	MLC1,HDAC10	BRD1,ZBED4	ZBED4,BRD1	MCF7	ChIA-PET	22265404	ZBED4	3084	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	50345940	50346570	50346146	Y	NA	CRELD2,ALG12,PIM3	PLXNB2	MCF7	ChIA-PET	22265404	PIM3	5591	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	50364350	50364715	50364589	Y	NA	PIM3	NA	NA	NA	NA	PIM3	12189	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	50414821	50415138	50414874	Y	BRD1,TUBGCP6,TRABD,PANX2,HDAC10,PIM3	NA	NA	NA	NA	NA	PIM3	62660	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	50743986	50744741	50744427	Y	PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2	MAPK12,MAPK11,PPP6R2	NA	NA	NA	NA	PLXNB2	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr22	50971581	50971951	50971703	Y	NA	LMF2,NCAPH2,SCO2,TYMP,CHKB-CPT1B	NA	NA	NA	NA	TYMP	5096	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr22	50980817	50981280	50981217	Y	NA	LMF2,NCAPH2,SCO2,TYMP,CHKB-CPT1B	NA	NA	NA	NA	TYMP	14332	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	3202241	3202572	3202332	Y	NA	TRNT1,CRBN	NA	NA	NA	NA	CRBN	16822	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	4908577	4908896	4908639	Y	BHLHE40	NA	NA	NA	NA	NA	BHLHE40	109905	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	4909917	4910799	4910503	Y	ITPR1,EDEM1,BHLHE40,ARL8B	NA	NA	NA	NA	NA	BHLHE40	108002	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	5027453	5027635	5027574	Y	EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	NA	NA	NA	NA	BHLHE40-AS1	7807	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	5028534	5029013	5028702	Y	ITPR1,EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	NA	NA	NA	NA	BHLHE40-AS1	8888	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr3	5059566	5059965	5059743	Y	ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40,ITPR1,EGOT	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BHLHE40-AS1	39920	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	5065036	5065378	5065161	Y	BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40,ITPR1,EGOT	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BHLHE40-AS1	45390	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	5067974	5068590	5068209	Y	EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40,ITPR1,EGOT	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BHLHE40-AS1	48328	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr3	5181258	5181597	5181446	Y	BHLHE40,ARL8B,EDEM1	ARL8B,AC026202.3,EDEM1	EDEM1	IMR90	Hi-C	24141950	ARL8B	19353	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	8781836	8782151	8782020	Y	NA	OXTR	NA	NA	NA	NA	OXTR	27163	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	8911307	8911734	8911565	Y	OXTR	NA	NA	NA	NA	NA	RAD18	91723	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	10240691	10241307	10240999	Y	ARPC4,VHL,IRAK2,TATDN2	IRAK2,TATDN2	NA	NA	NA	NA	IRAK2	36142	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	10402355	10402452	10402401	Y	FANCD2	SEC13	NA	NA	NA	NA	SEC13	41493	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr3	11237617	11237805	11237677	Y	NA	NA	NA	NA	NA	NA	HRH1	60838	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	11279893	11280094	11280011	Y	NA	ATG7	NA	NA	NA	NA	ATG7	31901	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	11609664	11609798	11609746	Y	NA	NA	NA	NA	NA	NA	VGLL4	150422	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	12350153	12350305	12350183	Y	NA	PPARG	NA	NA	NA	NA	PPARG	23286	CAGE	RERF-LC-AI	hg19	FANTOM5	6.87298861676983
chr3	13035460	13035932	13035883	Y	CAND2,IQSEC1,HDAC11,HDAC11,IQSEC1	NA	NA	NA	NA	NA	IQSEC1	76685	CAGE	RERF-LC-AI	hg19	FANTOM5	6.46869516872455
chr3	13325256	13325344	13325300	Y	NA	NA	NUP210,LOC285375	IMR90	Hi-C	24141950	NUP210	134465	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	13493281	13493606	13493395	Y	NA	NUP210,HDAC11,HDAC11-AS1	IQSEC1,NUP210	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HDAC11	25618	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr3	13555627	13555924	13555826	Y	NA	HDAC11,HDAC11-AS1,FBLN2	NA	NA	NA	NA	FBLN2	15900	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	13936849	13937176	13936976	Y	NA	NA	C3orf19,TMEM43,CHCHD4,XPC,LSM3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CHCHD4	227194	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	14167210	14167731	14167391	Y	TMEM43,XPC	CHCHD4,TMEM43,AC093495.4	NA	NA	NA	NA	TMEM43	2770	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr3	14465560	14465693	14465626	Y	C3orf19,SLC6A6	SLC6A6	NA	NA	NA	NA	SLC6A6	23484	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	14466133	14466429	14466346	Y	C3orf19,XPC,SLC6A6	SLC6A6	NA	NA	NA	NA	SLC6A6	24057	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	14817078	14817479	14817226	Y	NA	NA	NA	NA	NA	NA	NR2C2	169612	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	14848047	14848355	14848186	Y	SLC6A6	NA	NA	NA	NA	NA	NR2C2	138736	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	15675662	15676068	15675826	Y	NA	BTD,HACL1	NA	NA	NA	NA	HACL1	34324	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr3	15677848	15678314	15678139	Y	ANKRD28,SH3BP5,SH3BP5,EAF1	BTD,HACL1	NA	NA	NA	NA	HACL1	36510	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	15678965	15679290	15679049	Y	NA	BTD,HACL1	NA	NA	NA	NA	HACL1	37627	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	15813744	15814005	15813933	Y	SH3BP5,SH3BP5,EAF1,ANKRD28	NA	BTD	IMR90	Hi-C	24141950	ANKRD28	85273	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	15835826	15836097	15835987	Y	SH3BP5,SH3BP5,EAF1,COLQ,DPH3,ANKRD28	NA	NA	NA	NA	NA	ANKRD28	63181	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	16024262	16024670	16024542	Y	NA	NA	ANKRD28,GALNTL2,MIR563	IMR90	Hi-C	24141950	ANKRD28	124984	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	16380469	16380852	16380674	Y	DPH3	NA	NA	NA	NA	NA	OXNAD1	75763	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	16544909	16545021	16544965	Y	RFTN1	RFTN1	NA	NA	NA	NA	RFTN1	8512	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	17229616	17229788	17229702	Y	NA	NA	NA	NA	NA	NA	PLCL2	387457	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	19188369	19188866	19188531	Y	NA	NA	NA	NA	NA	NA	SATB1	703289	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	27524458	27524952	27524717	Y	NA	SLC4A7	NA	NA	NA	NA	SLC4A7	547	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	27674607	27674970	27674793	Y	NA	AC098614.2	SLC4A7,NEK10	IMR90	Hi-C	24141950	AC098614.2	2140	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr3	27756583	27756832	27756794	Y	EOMES	NA	NA	NA	NA	NA	AC098614.2	84116	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	36805780	36806178	36806113	Y	NA	NA	NA	NA	NA	NA	TRANK1	178370	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	36937540	36937792	36937666	Y	NA	TRANK1	NA	NA	NA	NA	TRANK1	46756	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	37901883	37902306	37902042	Y	CTDSPL	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	432	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	39193999	39194528	39194467	Y	NA	TTC21A,GORASP1	NA	NA	NA	NA	CSRNP1	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	41725291	41725392	41725346	Y	NA	NA	NA	NA	NA	NA	ULK4	276530	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	42514954	42515471	42515310	Y	NA	VIPR1	TRAK1,VIPR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	VIPR1	13320	CAGE	RERF-LC-AI	hg19	FANTOM5	4.04293448045284
chr3	42531634	42531985	42531932	Y	NA	VIPR1	NA	NA	NA	NA	VIPR1	2843	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	44040259	44040834	44040651	Y	NA	NA	ANO10	IMR90	Hi-C	24141950	MIR138-1	112870	CAGE	RERF-LC-AI	hg19	FANTOM5	8.89445585699626
chr3	44621262	44622718	44622436	Y	NA	ZNF197	NA	NA	NA	NA	ZNF197	1662	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	45686431	45686643	45686512	Y	NA	SACM1L	SACM1L,LOC644714	IMR90	Hi-C	24141950	SACM1L	41905	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	46446451	46447230	46446768	Y	CCR1,CCR5,CCRL2,CCRL2	NA	CCRL2,CCR5	IMR90	Hi-C	24141950	ALS2CL	285964	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	46600040	46600219	46600077	Y	NA	NA	NA	NA	NA	NA	ALS2CL	132975	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	46995135	46995433	46995392	Y	NA	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	23740	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	47002825	47003246	47003204	Y	NA	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	15927	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	47704557	47705253	47705047	Y	SETD2	NA	NA	NA	NA	NA	CSPG5	84275	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	50264852	50265230	50265012	Y	TUSC2,IP6K1,GNAI2,GNAI2	GNAI2	NA	NA	NA	NA	GNAI2	3128	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	50377372	50377700	50377536	Y	NA	IFRD2,NAT6,HYAL3,HYAL2,TUSC2,RASSF1,CYB561D2,NPRL2,TMEM115	NA	NA	NA	NA	RASSF1	961	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	51377903	51378233	51378113	Y	NA	MANF,RBM15B	NA	NA	NA	NA	MANF	42245	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	52652258	52652629	52652403	Y	GLYCTK,MUSTN1,GLT8D1	NA	NA	NA	NA	NA	GNL3	60543	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	52704686	52705129	52704984	Y	WDR82,GLYCTK,TMEM110,PRKCD,PBRM1	GNL3,PBRM1,SPCS1,GLT8D1	NA	NA	NA	NA	GNL3	8043	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	53270281	53270430	53270371	Y	PRKCD,DCP1A,TKT	TKT	NA	NA	NA	NA	TKT	17638	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	53360286	53360418	53360351	Y	NA	DCP1A	NA	NA	NA	NA	DCP1A	19236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	57562103	57562255	57562188	Y	SLMAP,FAM116A,APPL1,PDE12	PDE12,ARF4	NA	NA	NA	NA	ARF4	19692	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	57637831	57638080	57637955	Y	SLMAP,FAM116A,PDE12	RP11-755B10.3	NA	NA	NA	NA	RP11-755B10.3	38852	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	57960548	57960842	57960815	Y	FLNB	FLNB	ARF4,FLNB	IMR90	Hi-C	24141950	FLNB	31285	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	58585428	58585740	58585446	Y	NA	FAM107A	NA	NA	NA	NA	FAM107A	25597	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	61828479	61828865	61828501	Y	PTPRG	NA	NA	NA	NA	NA	RPL10AP6	101699	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	62572991	62573174	62573036	Y	NA	NA	NA	NA	NA	NA	PTPRG-AS1	219986	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	65013149	65013388	65013334	Y	NA	NA	NA	NA	NA	NA	ADAMTS9	341473	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	66491612	66491762	66491706	Y	NA	NA	NA	NA	NA	NA	LRIG1	57925	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	71136796	71137147	71137136	Y	FOXP1	NA	NA	NA	NA	NA	FOXP1	493993	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	71150221	71150629	71150383	Y	NA	NA	NA	NA	NA	NA	FOXP1	480511	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	72940180	72940555	72940311	Y	GXYLT2	SHQ1,GXYLT2,FTH1P23	NA	NA	NA	NA	GXYLT2	4956	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	73159773	73160145	73159855	Y	EBLN2	NA	PDZRN3,CACNA1D	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPP4R2	115837	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	77886401	77886419	77886410	Y	NA	NA	NA	NA	NA	NA	RP11-550F7.1	1405232	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	86842931	86843272	86843115	Y	VGLL3	NA	VGLL3	IMR90	Hi-C	24141950	VGLL3	194997	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	96336052	96336669	96336607	Y	NA	NA	NA	NA	NA	NA	HNRNPKP4	269654	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr3	98685741	98686133	98685825	Y	NA	LINC00973	DCBLD2	IMR90	Hi-C	24141950	LINC00973	11769	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	99909937	99910189	99910085	Y	NA	NA	NA	NA	NA	NA	TBC1D23	67655	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	101444542	101444901	101444615	Y	FAM55C,FAM55C,CEP97	RPL24,CEP97	NA	NA	NA	NA	CEP97	3773	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	103522825	103523125	103522973	Y	NA	NA	NA	NA	NA	NA	RNU1-43P	646021	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	105087492	105087848	105087688	Y	NA	ALCAM	NA	NA	NA	NA	ALCAM	3739	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	105087916	105088171	105088021	Y	ALCAM	ALCAM	NA	NA	NA	NA	ALCAM	4163	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	106782352	106782425	106782408	Y	NA	NA	CBLB	IMR90	Hi-C	24141950	LINC00883	175114	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	107148837	107149015	107148915	Y	NA	NA	LOC344595,BBX,LOC100302640	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BBX	90768	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	110587612	110587624	110587618	Y	NA	NA	NA	NA	NA	NA	PVRL3	199294	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	111326991	111326995	111326993	Y	CD96	ZBED2	NA	NA	NA	NA	ZBED2	14701	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	111484180	111484533	111484208	Y	NA	PHLDB2	NA	NA	NA	NA	PHLDB2	34836	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	112109657	112110558	112110278	Y	CD200	NA	CD200,C3orf52,GCET2,BTLA,ATG3	IMR90	Hi-C	24141950	CD200	60463	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	112390838	112391135	112390988	Y	CCDC80	CCDC80	NA	NA	NA	NA	CCDC80	24461	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	114231020	114231412	114231084	Y	ZBTB20	NA	NA	NA	NA	NA	KIAA1407	457560	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	115502758	115503253	115502970	Y	NA	NA	NA	NA	NA	NA	ZBTB20	638640	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	115503263	115503751	115503546	Y	NA	NA	NA	NA	NA	NA	ZBTB20	639145	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	115558428	115558819	115558693	Y	GAP43	NA	NA	NA	NA	NA	ZBTB20	694310	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	119146429	119146829	119146680	Y	ARHGAP31,CD80,ADPRH	TMEM39A,POGLUT1	NA	NA	NA	NA	TMEM39A	38848	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	119237356	119237846	119237595	Y	ARHGAP31,COX17,CD80,ADPRH,TMEM39A,POGLUT1	TIMMDC1	NA	NA	NA	NA	TIMMDC1	21977	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	119809073	119809433	119809278	Y	NA	GSK3B,RP11-18H7.1	NA	NA	NA	NA	GSK3B	1831	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	119864415	119864682	119864534	Y	COX17,GSK3B	NA	NA	NA	NA	NA	RP11-18H7.1	52673	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	120167583	120167922	120167648	Y	NA	FSTL1	NA	NA	NA	NA	FSTL1	178	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr3	125363284	125363563	125363390	Y	OSBPL11	NA	NA	NA	NA	NA	OSBPL11	51350	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	125709142	125709481	125709414	Y	ZXDC,CCDC37	NA	NA	NA	NA	NA	RP11-124N2.1	91582	CAGE	RERF-LC-AI	hg19	FANTOM5	8.08586896090569
chr3	126126680	126126867	126126779	Y	NA	NA	NA	NA	NA	NA	KLF15	52395	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	126391611	126391660	126391640	Y	NA	TXNRD3,CHCHD6	NA	NA	NA	NA	TXNRD3	19613	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	126701397	126702091	126701497	Y	PLXNA1	NA	CHCHD6,PLXNA1	MCF7,K562	ChIA-PET	22265404	CHCHD6	280334	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	126721076	126721245	126721142	Y	PLXNA1	NA	NA	NA	NA	NA	CHCHD6	300013	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	126945882	126946306	126946211	Y	MCM2	NA	NUP210P1	IMR90	Hi-C	24141950	MCM2	368760	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	127266508	127266786	127266647	Y	KBTBD12	MCM2,TPRA1	CHCHD6	IMR90	Hi-C	24141950	MCM2	48280	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	127494660	127494939	127494869	Y	TPRA1,TPRA1,MGLL,MGLL	MGLL	NA	NA	NA	NA	MGLL	45112	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	127522578	127522702	127522699	Y	TPRA1,TPRA1,MGLL,MGLL	MGLL	NA	NA	NA	NA	MGLL	17349	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	127536409	127536633	127536521	Y	TPRA1,TPRA1,MGLL,MGLL,KBTBD12	MGLL	NA	NA	NA	NA	MGLL	3418	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	128446542	128446927	128446583	Y	NA	RPN1,RAB7A,FTH1P4	NA	NA	NA	NA	RAB7A	3577	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	129245456	129245718	129245564	Y	RHO	NA	NA	NA	NA	NA	PLXND1	77943	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr3	132030632	132030644	132030638	Y	UBA5	NA	NA	NA	NA	NA	RPL7P16	69523	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	133289121	133289251	133289178	Y	SRPRB	CDV3	CDV3	MCF7	ChIA-PET	22265404	CDV3	1323	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	134045700	134046050	134045958	Y	NA	RPL39P5,AMOTL2	NA	NA	NA	NA	RPL39P5	27353	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	134047160	134047394	134047241	Y	ANAPC13,ANAPC13,ANAPC13,AMOTL2	RPL39P5,AMOTL2	NA	NA	NA	NA	RPL39P5	26009	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr3	134050159	134050571	134050486	Y	AMOTL2	RPL39P5,AMOTL2	NA	NA	NA	NA	RPL39P5	22832	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	134068231	134068586	134068519	Y	NA	RPL39P5,AMOTL2	NA	NA	NA	NA	RPL39P5	4817	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	134082893	134083489	134083439	Y	AMOTL2	RPL39P5,AMOTL2	NA	NA	NA	NA	AMOTL2	8832	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	136631651	136631818	136631718	Y	NA	NA	NA	NA	NA	NA	NCK1	52601	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	138410318	138410460	138410372	Y	NA	NA	NA	NA	NA	NA	FAIM	84870	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	138582294	138582582	138582441	Y	MRPS22	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	30514	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr3	138839594	138839666	138839621	Y	NA	NA	NA	NA	NA	NA	MRPS22	116946	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	139018358	139018692	139018412	Y	FOXL2,C3orf72	NA	BPESC1	IMR90	Hi-C	24141950	COPB2	87882	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	139824639	139824888	139824698	Y	NA	NA	NA	NA	NA	NA	CLSTN2	172612	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	140186013	140186197	140186105	Y	NA	NA	NA	NA	NA	NA	SLC25A36	472475	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	141610914	141611173	141610928	Y	NA	ATP1B3	NA	NA	NA	NA	ATP1B3	17948	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	147744234	147744618	147744426	Y	NA	NA	NA	NA	NA	NA	GYG1	962510	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	149099928	149100323	149100052	Y	TM4SF1	TM4SF1	GYG1,TM4SF18,TM4SF1,TM4SF4,WWTR1	IMR90	Hi-C	24141950	TM4SF1	6276	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	149104739	149105065	149104981	Y	COMMD2,TM4SF1	TM4SF1	GYG1,TM4SF18,TM4SF1,TM4SF4,WWTR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TM4SF1	11087	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	149657313	149657850	149657694	Y	TSC22D2,RNF13	ANKUB1	NA	NA	NA	NA	ANKUB1	26322	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	150066449	150066620	150066527	Y	NA	NA	PFN2,RNF13,LOC646903,TSC22D2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TSC22D2	57502	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	150089534	150090066	150089791	Y	NA	TSC22D2	TSC22D2,LOC646903,RNF13,PFN2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TSC22D2	34056	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	156442773	156442811	156442792	Y	TIPARP,TIPARP,TIPARP	NA	NA	NA	NA	NA	TIPARP-AS1	52606	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	156443600	156443618	156443611	Y	LEKR1,LEKR1,CCNL1,TIPARP,TIPARP,TIPARP	NA	NA	NA	NA	NA	TIPARP-AS1	53433	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	156506058	156506346	156506123	Y	SSR3	PA2G4P4,LINC00886,LEKR1	NA	NA	NA	NA	PA2G4P4	20175	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	156828715	156829105	156828910	Y	NA	RP11-6F2.5,CCNL1	NA	NA	NA	NA	RP11-6F2.5	31085	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	156837520	156837824	156837670	Y	NA	RP11-6F2.5,CCNL1	NA	NA	NA	NA	CCNL1	38725	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	159514645	159514911	159514780	Y	NA	NA	NA	NA	NA	NA	IL12A	189626	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	165215447	165215733	165215492	Y	NA	NA	NA	NA	NA	NA	PDCD10	2234994	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	169379831	169380308	169379976	Y	NA	MECOM	NA	NA	NA	NA	MECOM	425	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	169482089	169482431	169482154	Y	NA	TERC,MYNN,LRRC34	NA	NA	NA	NA	TERC	1241	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	169941070	169941418	169941334	Y	MYNN,MYNN,LRRIQ4,PHC3	PHC3,PRKCI	NA	NA	NA	NA	PRKCI	2917	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	170444418	170445820	170444586	Y	CLDN11,CLDN11,RPL22L1,EIF5A2	NA	CLDN11,SLC7A14,SKIL,PRKCI	IMR90	Hi-C	24141950	RPL22L1	140452	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr3	170527099	170527304	170527203	Y	EIF5A2	NA	SLC7A14,CLDN11,SKIL,PRKCI	IMR90	Hi-C	24141950	RPL22L1	58968	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	171592038	171592451	171592208	Y	FNDC3B	NA	NA	NA	NA	NA	PLD1	65298	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	171859893	171860698	171860535	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	104475	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	171927297	171927567	171927433	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	171879	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	171954526	171954782	171954635	Y	FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	199108	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	172467147	172467552	172467259	Y	NA	NCEH1,ECT2,RNU4-4P	NCEH1,ECT2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ECT2	675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	173650294	173650720	173650491	Y	NA	NA	NA	NA	NA	NA	RP11-393N4.2	442314	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	173789505	173789779	173789642	Y	NA	NA	NA	NA	NA	NA	RP11-393N4.2	303255	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	178236576	178236655	178236649	Y	KCNMB2	NA	KCNMB2	IMR90	Hi-C	24141950	ZMAT3	551412	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	178978348	178978737	178978528	Y	PIK3CA,MFN1,GNB4	LRRFIP1P1	NA	NA	NA	NA	LRRFIP1P1	1287	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	179049621	179049719	179049674	Y	NA	ZNF639,MFN1	NA	NA	NA	NA	ZNF639	10842	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	179659956	179660305	179660211	Y	PEX5L	NA	NA	NA	NA	NA	USP13	291413	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	183003579	183004143	183003750	Y	ATP11B,B3GNT5,KLHL6,KLHL24	NA	NA	NA	NA	NA	LAMP3	123952	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	185034789	185035224	185034953	Y	NA	EHHADH,MAP3K13	NA	NA	NA	NA	MAP3K13	36060	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	185821581	185821963	185821920	Y	NA	ETV5	NA	NA	NA	NA	ETV5	4144	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	187459288	187459644	187459469	Y	RTP4,BCL6,BCL6,BCL6	BCL6	NA	NA	NA	NA	BCL6	1871	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	187980692	187981197	187980748	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	110847	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	187984257	187984703	187984570	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	114412	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	188324508	188324886	188324659	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	454663	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	189022377	189022942	189022424	Y	NA	NA	NA	NA	NA	NA	LEPREL1	815284	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	190251387	190251779	190251471	Y	CLDN1	IL1RAP	NA	NA	NA	NA	IL1RAP	21547	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	193876735	193877026	193876899	Y	NA	HES1	NA	NA	NA	NA	HES1	24801	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	194040514	194040910	194040840	Y	HES1	NA	NA	NA	NA	NA	ATP13A3	176183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	194461690	194461887	194461800	Y	FAM43A	NA	NA	NA	NA	NA	FAM43A	57068	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr3	194973636	194973680	194973658	Y	NA	XXYLT1	NA	NA	NA	NA	XXYLT1	16216	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr3	196064212	196064579	196064504	Y	WDR53,ZDHHC19	TCTEX1D2,TM4SF19	NA	NA	NA	NA	TM4SF19	838	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	683740	684022	683889	Y	GAK,MYL5,MFSD7,PCGF3	MYL5,ATP5I,PCGF3	NA	NA	NA	NA	PCGF3	13515	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	742666	742733	742699	Y	NA	PCGF3,RP11-440L14.1	NA	NA	NA	NA	RP11-440L14.1	30904	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	1562061	1562319	1562152	Y	NA	RP11-1398P2.1	NA	NA	NA	NA	RP11-1398P2.1	17661	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	2537711	2538436	2538089	Y	NA	NA	NA	NA	NA	NA	RNF4	75764	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	4577048	4577566	4577357	Y	NA	STX18-AS1,STX18	NA	NA	NA	NA	STX18	34975	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	5640113	5640289	5640201	Y	NA	NA	NA	NA	NA	NA	EVC2	68986	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	6565985	6566385	6566254	Y	JAKMIP1,TBC1D14,PPP2R2C,PPP2R2C	PPP2R2C,MAN2B2	NA	NA	NA	NA	PPP2R2C	2658	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	6592942	6593078	6593012	Y	NA	PPP2R2C,MAN2B2,MRFAP1	NA	NA	NA	NA	MAN2B2	18040	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	6734442	6734743	6734533	Y	KIAA0232	MRFAP1L1,KIAA0232	NA	NA	NA	NA	MRFAP1L1	24835	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	7209017	7209262	7209117	Y	NA	SORCS2	NA	NA	NA	NA	SORCS2	16752	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	7649791	7650390	7650086	Y	NA	NA	NA	NA	NA	NA	AFAP1-AS1	103427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr4	7807485	7807548	7807490	Y	NA	NA	NA	NA	NA	NA	AFAP1-AS1	53668	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	7846072	7846237	7846145	Y	AFAP1	NA	NA	NA	NA	NA	AFAP1-AS1	92255	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr4	9154755	9155069	9154900	Y	NA	FAM86KP	NA	NA	NA	NA	FAM86KP	1733	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr4	10182011	10182277	10182105	Y	WDR1	NA	WDR1,CLNK,ZNF518B	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	WDR1	65438	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	13439753	13439937	13439845	Y	NA	RAB28	NA	NA	NA	NA	RAB28	44052	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	15895700	15895839	15895750	Y	FGFBP1	NA	CC2D2A	IMR90	Hi-C	24141950	RP11-115L11.1	164450	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	15922988	15923279	15923080	Y	FGFBP1	NA	NA	NA	NA	NA	RP11-115L11.1	191738	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	17853657	17853735	17853696	Y	NA	DCAF16,NCAPG	NA	NA	NA	NA	NCAPG	43132	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	21144866	21145229	21145048	Y	NA	NA	NA	NA	NA	NA	PACRGL	448961	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	21602576	21603408	21603328	Y	KCNIP4,KCNIP4,KCNIP4	NA	NA	NA	NA	NA	PACRGL	906671	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	23890124	23890507	23890316	Y	PPARGC1A	PPARGC1A	NA	NA	NA	NA	PPARGC1A	13205	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	24262994	24263251	24263044	Y	NA	NA	PPARGC1A	IMR90	Hi-C	24141950	DHX15	320922	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	24324211	24324732	24324357	Y	NA	NA	NA	NA	NA	NA	DHX15	259441	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	26031795	26032283	26031985	Y	NA	NA	RBPJ,TBC1D19,STIM2	IMR90	Hi-C	24141950	RBPJ	130794	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	35022631	35023155	35023089	Y	NA	NA	NA	NA	NA	NA	ARAP2	1220976	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr4	35027106	35027343	35027234	Y	NA	NA	NA	NA	NA	NA	ARAP2	1216788	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	37581972	37582372	37582240	Y	NA	NA	NA	NA	NA	NA	RELL1	103626	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	38668617	38669179	38668850	Y	KLF3	KLF3	NA	NA	NA	NA	KLF3	4800	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	38859134	38859762	38859410	Y	KLF3,KLHL5,TLR1,TLR6	FAM114A1	NA	NA	NA	NA	FAM114A1	7536	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr4	38950892	38951246	38951151	Y	KLF3	NA	NA	NA	NA	NA	FAM114A1	83594	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	40765283	40765623	40765452	Y	RBM47	NSUN7	NA	NA	NA	NA	NSUN7	15369	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	40992630	40993044	40992776	Y	APBB2	NA	NA	NA	NA	NA	APBB2	223687	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	41509451	41509766	41509557	Y	LIMCH1	NA	NA	NA	NA	NA	LIMCH1	149827	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	48851417	48851730	48851443	Y	ZAR1,FRYL	OCIAD1	NA	NA	NA	NA	OCIAD1	46188	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	54958023	54958135	54958077	Y	NA	CHIC2	SCFD2,CHIC2	IMR90	Hi-C	24141950	CHIC2	29166	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr4	56901915	56901931	56901923	Y	KIAA1211	NA	NA	NA	NA	NA	CEP135	88878	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	57940962	57941225	57941094	Y	NA	IGFBP7-AS1,IGFBP7	NA	NA	NA	NA	IGFBP7-AS1	32703	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	57960936	57961321	57961171	Y	NA	IGFBP7-AS1,IGFBP7	NA	NA	NA	NA	IGFBP7-AS1	12607	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	65475793	65476032	65475913	Y	NA	NA	NA	NA	NA	NA	RP11-204H9.2	181166	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	75859868	75860329	75860092	Y	BTC,PARM1	PARM1	NA	NA	NA	NA	PARM1	3563	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	76487136	76487403	76487267	Y	NA	THAP6,RCHY1	NA	NA	NA	NA	RCHY1	49162	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	77380282	77380659	77380469	Y	NA	SHROOM3	NA	NA	NA	NA	SHROOM3	26029	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	77674311	77674688	77674546	Y	SEPT11	NA	NA	NA	NA	NA	SEPT11	194168	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	78979777	78980204	78980085	Y	NA	FRAS1	NA	NA	NA	NA	FRAS1	3053	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	84398625	84398990	84398638	Y	NA	HELQ,MRPS18C,FAM175A	NA	NA	NA	NA	MRPS18C	23540	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	84474210	84474441	84474327	Y	PLAC8,COQ2,HPSE,HPSE,HPSE,HELQ,AGPAT9	FAM175A,AGPAT9	NA	NA	NA	NA	AGPAT9	19143	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	87615730	87616123	87615813	Y	PTPN13,SLC10A6	NA	NA	NA	NA	NA	PTPN13	102262	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	87835479	87835856	87835675	Y	NA	AFF1,TECRP1	NA	NA	NA	NA	AFF1	18298	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr4	89747458	89747948	89747469	Y	NA	NA	NA	NA	NA	NA	PIGY	306518	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	109513186	109513523	109513472	Y	NA	RPL34	NA	NA	NA	NA	RPL34	26199	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	111086740	111086853	111086804	Y	NA	ELOVL6	NA	NA	NA	NA	ELOVL6	31502	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	111114926	111115298	111115104	Y	GAR1,ELOVL6,ELOVL6	ELOVL6	NA	NA	NA	NA	ELOVL6	3057	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	112732930	112733119	112733025	Y	NA	NA	NA	NA	NA	NA	C4orf32	331434	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	113972367	113972735	113972428	Y	NA	NA	NA	NA	NA	NA	ANK2	235102	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	114389425	114389805	114389547	Y	NA	RNU1-138P	NA	NA	NA	NA	RNU1-138P	49946	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr4	119629667	119629850	119629760	Y	NA	METTL14	NA	NA	NA	NA	METTL14	25144	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	123771840	123772248	123772020	Y	NA	NA	NA	NA	NA	NA	NUDT6	69875	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	128894970	128895372	128895225	Y	NA	C4orf29,MFSD8	NA	NA	NA	NA	MFSD8	9820	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	129308281	129308471	129308363	Y	NA	NA	PGRMC2,PHF17,LARP1B,SCLT1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-420A23.1	96375	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	139173167	139173319	139173175	Y	NA	SLC7A11	SLC7A11	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC7A11	11664	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr4	139960939	139961173	139961057	Y	NAA15,CCRN4L	CCRN4L	NA	NA	NA	NA	CCRN4L	25996	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	140321405	140321719	140321434	Y	ELF2,NAA15,RAB33B	NA	NA	NA	NA	NA	RAB33B	50667	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	140967961	140968185	140967999	Y	NA	NA	NA	NA	NA	NA	SCOC	208255	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	141012548	141012827	141012747	Y	MAML3	NA	NA	NA	NA	NA	SCOC	163613	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	143206374	143206633	143206590	Y	NA	NA	NA	NA	NA	NA	INPP4B	559952	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	144276815	144277022	144276900	Y	NA	GAB1	NA	NA	NA	NA	GAB1	20900	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	146015172	146015244	146015208	Y	NA	ABCE1,ANAPC10	NA	NA	NA	NA	ABCE1	1840	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	146656396	146656737	146656614	Y	NA	NA	NA	NA	NA	NA	MMAA	118981	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	146856855	146857112	146856936	Y	NA	ZNF827	NA	NA	NA	NA	ZNF827	675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr4	152405859	152406228	152406131	Y	NA	NA	NA	NA	NA	NA	FAM160A1	77491	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	157870715	157871133	157870964	Y	NA	PDGFC	NA	NA	NA	NA	PDGFC	19413	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr4	159731152	159732543	159732097	Y	PPID,RAPGEF2,FNIP2	FNIP2	NA	NA	NA	NA	FNIP2	42862	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	164414222	164414415	164414319	Y	TKTL2,C4orf43	NA	NA	NA	NA	NA	NAF1	328149	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	169479701	169480223	169479961	Y	NA	DDX60L	NA	NA	NA	NA	DDX60L	22764	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	170172551	170172946	170172870	Y	NA	SH3RF1	NA	NA	NA	NA	SH3RF1	17310	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	177191849	177192202	177191988	Y	ASB5	SPCS3,RP11-87F15.2	SPATA4	IMR90	Hi-C	24141950	SPCS3	46913	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	178329034	178329328	178329176	Y	NA	AGA	NA	NA	NA	NA	AGA	32329	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	183161464	183161792	183161628	Y	ODZ3	NA	ODZ3	IMR90	Hi-C	24141950	AC108142.1	97062	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	183730445	183730610	183730498	Y	NA	NA	NA	NA	NA	NA	DCTD	106479	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr4	183935008	183935168	183935057	Y	NA	NA	WWC2,FAM92A3,ODZ3,CLDN24	IMR90	Hi-C	24141950	WWC2	83278	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	184270914	184271169	184271084	Y	NA	NA	CLDN24,CLDN22	IMR90	Hi-C	24141950	CDKN2AIP	92575	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	184718887	184719489	184719407	Y	NA	NA	ENPP6,CASP3	IMR90	Hi-C	24141950	STOX2	53095	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	185393561	185393895	185393573	Y	ACSL1,CASP3,IRF2	NA	NA	NA	NA	NA	IRF2	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr4	185609676	185609967	185609740	Y	NA	CASP3	NA	NA	NA	NA	CASP3	41013	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	53990	54174	54063	Y	PLEKHG4B,C5orf55	CTD-2231H16.1	LRRC14B,CCDC127,PLEKHG4B,SDHA	IMR90	Hi-C	24141950	CTD-2231H16.1	36092	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	175502	175522	175512	Y	NA	CCDC127,SDHA	NA	NA	NA	NA	CCDC127	40808	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	394851	394874	394864	Y	NA	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	46384	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	523225	523441	523256	Y	SLC9A3	NA	NA	NA	NA	NA	CTD-2228K2.5	52012	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	672861	673336	673024	Y	NA	NA	NA	NA	NA	NA	CEP72	62474	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	1041596	1043550	1041859	Y	NA	NKD2	NA	NA	NA	NA	NKD2	34652	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	1468056	1468058	1468057	Y	NA	NA	NA	NA	NA	NA	LPCAT1	54034	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	3188206	3188572	3188389	Y	NA	NA	NA	NA	NA	NA	NDUFS6	1388692	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	3304230	3304631	3304430	Y	NA	NA	NA	NA	NA	NA	NDUFS6	1504716	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	6712873	6713977	6713364	Y	NA	NA	NA	NA	NA	NA	SRD5A1	81417	CAGE	RERF-LC-AI	hg19	FANTOM5	6.46869516872455
chr5	6766717	6766947	6766763	Y	SRD5A1,PAPD7	NA	NA	NA	NA	NA	SRD5A1	135261	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	10551479	10551871	10551616	Y	NA	ANKRD33B	MARCH6,ANKRD33B,ROPN1L	IMR90	Hi-C	24141950	ANKRD33B	10571	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	10565896	10566253	10566086	Y	NA	ANKRD33B	NA	NA	NA	NA	ANKRD33B	3454	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	10634343	10634413	10634378	Y	MARCH6,ANKRD33B	NA	NA	NA	NA	NA	ANKRD33B	71901	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	10692588	10692818	10692805	Y	NA	NA	NA	NA	NA	NA	DAP	66566	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr5	11283783	11284165	11283974	Y	NA	NA	NA	NA	NA	NA	DAP	524399	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	11487050	11487322	11487183	Y	NA	NA	NA	NA	NA	NA	DAP	727666	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14036813	14036909	14036843	Y	NA	NA	TRIO	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAH5	94161	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14037561	14037744	14037653	Y	NA	NA	TRIO	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAH5	94909	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	14038478	14038912	14038655	Y	NA	NA	TRIO	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAH5	95826	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14142803	14143164	14142969	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	992	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr5	14154284	14154671	14154327	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	12473	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14174472	14174896	14174531	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	32661	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14185691	14186191	14185984	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	43880	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	14208730	14209007	14208812	Y	NA	NA	NA	NA	NA	NA	TRIO	66919	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14250238	14250405	14250312	Y	NA	NA	NA	NA	NA	NA	TRIO	108427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14264855	14265210	14264930	Y	TRIO	NA	NA	NA	NA	NA	TRIO	123044	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14268390	14268821	14268476	Y	NA	NA	NA	NA	NA	NA	TRIO	126579	CAGE	RERF-LC-AI	hg19	FANTOM5	9.70304275308682
chr5	14489488	14489835	14489662	Y	NA	NA	NA	NA	NA	NA	FAM105A	90049	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	14639692	14640047	14639871	Y	NA	FAM105B	TRIO,FAM105A	IMR90	Hi-C	24141950	FAM105B	22726	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	17224986	17225514	17225115	Y	BASP1	NA	NA	NA	NA	NA	RN7SKP133	118211	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	17249327	17249860	17249454	Y	NA	NA	NA	NA	NA	NA	RN7SKP133	93865	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	25910581	25911176	25910785	Y	NA	NA	NA	NA	NA	NA	RP11-549K20.1	721816	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	33789074	33789288	33789217	Y	ADAMTS12	NA	NA	NA	NA	NA	AMACR	216932	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	36151218	36151404	36151252	Y	C5orf33,C5orf33,SKP2,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	1127	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	36174356	36174616	36174412	Y	SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	24265	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	36690488	36690876	36690655	Y	NIPBL	NA	NA	NA	NA	NA	SLC1A3	86031	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	37838047	37838605	37838394	Y	GDNF,GDNF,GDNF	NA	NA	NA	NA	NA	WDR70	460733	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	37838959	37839206	37839080	Y	GDNF,GDNF,GDNF	NA	NA	NA	NA	NA	WDR70	461645	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	43020158	43020617	43020275	Y	C5orf28,ZNF131,C5orf39	AC025171.1,ZNF131,CTD-2201E18.3	NA	NA	NA	NA	AC025171.1	19060	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	43020658	43020829	43020797	Y	ZNF131,C5orf39	AC025171.1,ZNF131,CTD-2201E18.3	NA	NA	NA	NA	AC025171.1	18848	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	50263404	50263601	50263575	Y	ISL1	NA	NA	NA	NA	NA	PARP8	303671	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	52545484	52545615	52545603	Y	ITGA2,FST	NA	ARL15,FST	IMR90	Hi-C	24141950	MOCS2	141591	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr5	54622279	54622499	54622328	Y	NA	DHX29,SKIV2L2	NA	NA	NA	NA	SKIV2L2	20691	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	55287334	55287994	55287973	Y	NA	IL6ST,CTD-2031P19.3	NA	NA	NA	NA	IL6ST	827	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	55289605	55289989	55289924	Y	IL6ST	IL6ST,CTD-2031P19.3	NA	NA	NA	NA	CTD-2031P19.3	610	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	55575946	55576115	55576004	Y	NA	NA	MAP3K1,MIER3	IMR90	Hi-C	24141950	AC022431.1	222784	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	57111915	57112364	57112128	Y	ACTBL2	NA	PLK2	IMR90	Hi-C	24141950	PLK2	641723	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	57112814	57113117	57112881	Y	ACTBL2	NA	PLK2	IMR90	Hi-C	24141950	PLK2	640970	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	58332286	58332474	58332297	Y	PDE4D	NA	NA	NA	NA	NA	PLK2	578199	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	60526663	60526879	60526778	Y	NA	NA	NA	NA	NA	NA	ZSWIM6	99221	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	60571773	60571988	60571884	Y	ZSWIM6	NA	NDUFAF2	IMR90	Hi-C	24141950	ZSWIM6	54112	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	64398874	64399506	64398924	Y	NA	NA	ADAMTS6,CWC27,PPWD1,CENPK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CWC27	336117	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	64505244	64505511	64505327	Y	ADAMTS6	NA	NA	NA	NA	NA	ADAMTS6	270236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	67875476	67875860	67875665	Y	PIK3R1	NA	NA	NA	NA	NA	PIK3R1	365928	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	68338463	68338878	68338699	Y	NA	SLC30A5	NA	NA	NA	NA	SLC30A5	48595	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	71404360	71404518	71404455	Y	MAP1B	MAP1B	NA	NA	NA	NA	MAP1B	3299	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	73611863	73612159	73611974	Y	NA	NA	RGNEF,ENC1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HEXB	321689	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	77792703	77793028	77792954	Y	NA	NA	NA	NA	NA	NA	SCAMP1	138364	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	77807354	77807759	77807583	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	153015	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	78270986	78271091	78271032	Y	NA	ARSB	NA	NA	NA	NA	ARSB	8819	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	81074673	81075064	81074862	Y	NA	SSBP2	SSBP2,ZCCHC9,ATG10	IMR90	Hi-C	24141950	SSBP2	29057	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	81630753	81631047	81630851	Y	NA	NA	NA	NA	NA	NA	RPS23	58357	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	82576471	82576688	82576580	Y	NA	NA	NA	NA	NA	NA	TMEM167A	204789	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	82768927	82769141	82769084	Y	VCAN	NA	NA	NA	NA	NA	HAPLN1	246291	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	83018086	83018575	83018426	Y	NA	HAPLN1	NA	NA	NA	NA	HAPLN1	2654	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	83221150	83221158	83221154	Y	NA	NA	NA	NA	NA	NA	RNU4-11P	123777	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	86663167	86663443	86663248	Y	NA	CCNH	NA	NA	NA	NA	CCNH	43393	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	86667091	86667409	86667357	Y	NA	CCNH	NA	NA	NA	NA	CCNH	39427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	87956632	87957169	87956907	Y	MEF2C,MEF2C	NA	NA	NA	NA	NA	MEF2C	240753	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	93256507	93256894	93256879	Y	NA	NA	NA	NA	NA	NA	FAM172A	188510	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	97645408	97646168	97645558	Y	RGMB	CH17-12M21.1	RGMB,FLJ35946	IMR90	Hi-C	24141950	CH17-12M21.1	26280	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	99382569	99383254	99382906	Y	NA	NA	NA	NA	NA	NA	ST8SIA4	853716	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	99387251	99388845	99388529	Y	NA	NA	NA	NA	NA	NA	ST8SIA4	848125	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	103559627	103559775	103559695	Y	NA	NA	NA	NA	NA	NA	NUDT12	663133	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	106802102	106802350	106802226	Y	NA	NA	NA	NA	NA	NA	EFNA5	202246	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	110830968	110831101	110831035	Y	WDR36,CAMK4,STARD4	STARD4	NA	NA	NA	NA	STARD4	15187	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	114726097	114726311	114726134	Y	NA	NA	NA	NA	NA	NA	CCDC112	95569	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	114847596	114847935	114847760	Y	NA	FEM1C	NA	NA	NA	NA	FEM1C	30656	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	116384111	116384324	116384221	Y	SEMA6A	NA	NA	NA	NA	NA	RPS17P2	334182	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	119016321	119016356	119016339	Y	NA	NA	NA	NA	NA	NA	HSD17B4	230183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	119848516	119848911	119848640	Y	NA	NA	NA	NA	NA	NA	PRR16	50543	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	119940626	119940961	119940736	Y	NA	NA	NA	NA	NA	NA	PRR16	142653	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	121516793	121517196	121516968	Y	LOX,LOX	NA	NA	NA	NA	NA	LOX	104813	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	124077955	124078154	124078062	Y	ZNF608	ZNF608	NA	NA	NA	NA	ZNF608	4346	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	125690030	125690185	125690123	Y	GRAMD3,GRAMD3	GRAMD3	GRAMD3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GRAMD3	3639	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	125709518	125709709	125709633	Y	GRAMD3	GRAMD3	NA	NA	NA	NA	GRAMD3	15694	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr5	125721947	125722154	125722072	Y	NA	GRAMD3	NA	NA	NA	NA	GRAMD3	28123	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	125730040	125730374	125730276	Y	C5orf48,ALDH7A1,GRAMD3,GRAMD3	GRAMD3	NA	NA	NA	NA	GRAMD3	36216	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	126478879	126479210	126479043	Y	NA	NA	NA	NA	NA	NA	C5orf63	71695	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	131430055	131430830	131430575	Y	RAPGEF6,FNIP1,SLC22A4,IRF1	CSF2	NA	NA	NA	NA	CSF2	22572	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	131810095	131810374	131810235	Y	AFF4,SLC22A4,IRF1	AC116366.5,IRF1	NA	NA	NA	NA	IRF1	14116	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	131832561	131832909	131832704	Y	AFF4,SLC22A4,IRF1	IRF1	IRF1	IMR90	Hi-C	24141950	IRF1	8071	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	133839310	133839404	133839346	Y	NA	NA	PHF15,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CDKN2AIPNL	93721	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	134259128	134259903	134259220	Y	NA	PCBD2,MTND6P4,MTND5P11,MTND4P12,MIR4461	NA	NA	NA	NA	MTND5P11	246	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	134261311	134262635	134261858	Y	NA	PCBD2,MTND6P4,MTND5P11	NA	NA	NA	NA	MTND4P12,MIR4461	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	136900041	136900222	136900186	Y	NA	SPOCK1	TRPC7	IMR90	Hi-C	24141950	SPOCK1	31846	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	137800317	137800564	137800421	Y	FAM13B,FAM53C,KDM3B,ETF1,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	1138	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	137827710	137828119	137827817	Y	EGR1	EGR1,ETF1	NA	NA	NA	NA	EGR1	28531	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	138127302	138127500	138127374	Y	NA	NA	NA	NA	NA	NA	CTNNA1	182646	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	138241399	138241693	138241546	Y	NA	NA	SIL1	IMR90	Hi-C	24141950	CTNNA1	296743	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	138851930	138852095	138852011	Y	NA	TMEM173	NA	NA	NA	NA	TMEM173	8425	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	140090601	140091006	140090806	Y	NA	WDR55,HARS2,HARS,ZMAT2	NA	NA	NA	NA	ZMAT2	14336	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	142623562	142623962	142623719	Y	NA	NA	NA	NA	NA	NA	RPL7P21	86208	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr5	142819954	142820205	142820015	Y	NA	NR3C1	NA	NA	NA	NA	NR3C1	6877	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	147782971	147782994	147782983	Y	ADRB2,SPINK14,FBXO38	FBXO38	NA	NA	NA	NA	FBXO38	21473	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	148290314	148290586	148290452	Y	NA	NA	SH3TC2,ADRB2,ABLIM3,AFAP1L1	IMR90	Hi-C	24141950	ADRB2	86158	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	148293572	148293925	148293745	Y	NA	NA	SH3TC2,ADRB2,ABLIM3,AFAP1L1	IMR90	Hi-C	24141950	ADRB2	89416	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	148352583	148352893	148352766	Y	ADRB2	NA	NA	NA	NA	NA	ADRB2	148427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	148738164	148738422	148738235	Y	PCYOX1L	GRPEL2,PCYOX1L	NA	NA	NA	NA	PCYOX1L	2594	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	148760371	148760619	148760464	Y	NA	GRPEL2,PCYOX1L	NA	NA	NA	NA	PCYOX1L	24801	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	149110531	149110757	149110649	Y	PPARGC1B	PPARGC1B	NA	NA	NA	NA	PPARGC1B	2670	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	149110836	149111455	149111198	Y	ARHGEF37,SLC26A2,CDX1,PPARGC1B	PPARGC1B	NA	NA	NA	NA	PPARGC1B	2975	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	150086779	150087134	150086956	Y	RBM22,DCTN4,DCTN4	RBM22,DCTN4	MYOZ3,RBM22	IMR90	Hi-C	24141950	RBM22	8110	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	150464543	150466084	150465220	Y	RBM22,DCTN4,DCTN4,SLC36A1,CCDC69,TNIP1	TNIP1	NA	NA	NA	NA	TNIP1	5054	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	151200780	151201112	151200835	Y	GLRA1	NA	NA	NA	NA	NA	ATOX1	50687	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	153963327	153963532	153963423	Y	MRPL22,SAP30L,HAND1	NA	NA	NA	NA	NA	LARP1	126930	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr5	154062607	154063000	154062805	Y	GEMIN5	LARP1	LARP1,C5orf4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LARP1	27462	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	159355194	159355367	159355277	Y	NA	ADRA1B	NA	NA	NA	NA	ADRA1B	13404	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	159592107	159592427	159592336	Y	NA	PWWP2A	TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PWWP2A	47677	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	168232470	168232861	168232812	Y	NA	NA	NA	NA	NA	NA	CTC-575D19.1	191153	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	169036644	169036796	169036768	Y	NA	NA	NA	NA	NA	NA	FAM196B	368948	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	169733349	169733836	169733608	Y	NA	LCP2	LCP2,KCNIP1,C5orf58	IMR90	Hi-C	24141950	LCP2	10118	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172205264	172205447	172205353	Y	UBTD2,C5orf41,DUSP1	DUSP1	DUSP1,ERGIC1,LOC100268168,ATP6V0E1,RPL26L1	IMR90	Hi-C	24141950	DUSP1	9066	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172228151	172228566	172228394	Y	DUSP1	DUSP1,ERGIC1	DUSP1,ERGIC1,LOC100268168,RPL26L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ERGIC1	30712	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172314817	172315056	172314937	Y	DUSP1,C5orf41	NA	NA	NA	NA	NA	ERGIC1	55539	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172329840	172330200	172330006	Y	DUSP1,C5orf41,ATP6V0E1,ERGIC1	NA	NA	NA	NA	NA	RPL26L1	53532	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172380663	172381064	172380838	Y	ERGIC1,ATP6V0E1	RPL26L1,ATP6V0E1	NA	NA	NA	NA	RPL26L1	2668	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172761341	172761739	172761505	Y	STC2	STC2	NA	NA	NA	NA	STC2	6835	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172881373	172881649	172881564	Y	CPEB4	NA	LOC285593,STC2,BOD1,CPEB4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	STC2	126867	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	172901872	172902293	172901982	Y	ATP6V0E1	NA	LOC285593,STC2,BOD1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BOD1	139370	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr5	177645267	177645446	177645363	Y	N4BP3,CLK4,AGXT2L2	HNRNPAB	NA	NA	NA	NA	HNRNPAB	15759	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	178003802	178003988	178003851	Y	ZNF454,ZFP2	NA	NA	NA	NA	NA	CLK4	51628	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	180473265	180473624	180473271	Y	BTNL9	NA	NA	NA	NA	NA	CTC-338M12.5	143300	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	180616521	180617006	180616799	Y	ZFP62,TRIM52,TRIM41	TRIM7,TRIM41,SNORD96A	NA	NA	NA	NA	CTC-338M12.5	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr5	180633694	180634117	180633980	Y	NA	CTC-338M12.5,TRIM7,TRIM41,SNORD96A,CTC-338M12.4,GNB2L1	NA	NA	NA	NA	TRIM7	3401	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr5	180634441	180634803	180634658	Y	NA	CTC-338M12.5,TRIM7,TRIM41,SNORD96A,CTC-338M12.4,GNB2L1	NA	NA	NA	NA	TRIM7	4148	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	298712	298948	298810	Y	DUSP22,IRF4	DUSP22	NA	NA	NA	NA	DUSP22	9082	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	1055850	1056126	1055989	Y	FOXQ1	NA	NA	NA	NA	NA	FOXQ1	254549	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	1131986	1132306	1132130	Y	NA	NA	LOC285768	IMR90	Hi-C	24141950	FOXQ1	178369	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	2980500	2980669	2980575	Y	SERPINB1,RIPK1,SERPINB9	SERPINB6,NQO2,HTATSF1P2	WRNIP1,MYLK4,MIR4645,MGC39372,SERPINB1,DKFZP686I15217,SERPINB6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NQO2	5552	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	3069574	3070273	3069674	Y	NA	HTATSF1P2,RIPK1,BPHL	LOC100507194,WRNIP1	K562	ChIA-PET	22265404	RIPK1	7349	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	3166310	3166878	3166542	Y	NA	BPHL,TUBB2A	NA	NA	NA	NA	TUBB2A	10550	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	3248062	3248427	3248198	Y	SLC22A23,TUBB2A,TUBB2B	PSMG4,TUBB2B	TUBB2A,BPHL,RIPK1,LOC100507194,TUBB2B	IMR90	Hi-C	24141950	TUBB2B	18098	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	3356099	3356749	3356628	Y	NA	NA	NA	NA	NA	NA	SLC22A23	98507	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	4317088	4317563	4317434	Y	CDYL	NA	RPP40,CDYL,LYRM4	IMR90	Hi-C	24141950	ECI2	183257	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	4582137	4582541	4582469	Y	NA	NA	CDYL,RPP40	IMR90	Hi-C	24141950	CDYL	121852	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	4613428	4613746	4613742	Y	NA	NA	CDYL,RPP40	IMR90	Hi-C	24141950	CDYL	90647	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	5287917	5288162	5288028	Y	NA	LYRM4,FARS2	NA	NA	NA	NA	FARS2	28640	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	6893405	6893534	6893469	Y	LY86	NA	RREB1	IMR90	Hi-C	24141950	RREB1	212296	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	7261407	7261720	7261663	Y	NA	NA	NA	NA	NA	NA	RP11-69L16.5	76081	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	7618671	7618993	7618833	Y	NA	SNRNP48	NA	NA	NA	NA	SNRNP48	30239	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	9037386	9037741	9037564	Y	NA	NA	NA	NA	NA	NA	SLC35B3	603592	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	9516527	9516706	9516607	Y	NA	NA	LOC100130275,TFAP2A,LINC00518	IMR90	Hi-C	24141950	TFAP2A	901186	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	10383571	10383981	10383824	Y	TFAP2A,TFAP2A	TFAP2A	NA	NA	NA	NA	TFAP2A	33911	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	10407698	10407754	10407725	Y	PAK1IP1,C6orf52,TFAP2A,TFAP2A	TFAP2A	NA	NA	NA	NA	TFAP2A	10138	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	10441526	10441791	10441655	Y	TMEM14C,TMEM14B,PAK1IP1,GCNT2,TFAP2A,TFAP2A,TFAP2A	TFAP2A,GCNT2	NA	NA	NA	NA	TFAP2A	23634	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	10970926	10971179	10971053	Y	NA	NA	NA	NA	NA	NA	ELOVL2	71368	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	11331718	11332104	11332092	Y	NA	NEDD9	NA	NA	NA	NA	NEDD9	48477	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	11609469	11609947	11609818	Y	NA	NA	HIVEP1,EDN1,ADTRP	IMR90	Hi-C	24141950	TMEM170B	73531	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	11769423	11769725	11769659	Y	HIVEP1	NA	NA	NA	NA	NA	TMEM170B	233485	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	11772710	11773287	11772940	Y	NEDD9,TMEM170B,HIVEP1	NA	NA	NA	NA	NA	HIVEP1	233708	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	11921182	11921467	11921322	Y	NA	NA	ADTRP,HIVEP1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	HIVEP1	85528	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	12208445	12208821	12208625	Y	HIVEP1,EDN1	NA	HIVEP1	IMR90	Hi-C	24141950	EDN1	79775	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	12288471	12288892	12288524	Y	NA	NA	NA	NA	NA	NA	EDN1	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	12592849	12593177	12593094	Y	EDN1	NA	TMEM170B,EDN1,HIVEP1	IMR90	Hi-C	24141950	RPL15P3	80507	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	12795944	12795984	12795964	Y	NA	NA	NA	NA	NA	NA	RPL15P3	283602	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	13096654	13096703	13096662	Y	NA	NA	NA	NA	NA	NA	RNU1-11P	115585	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	13354550	13354809	13354680	Y	NA	TBC1D7	NA	NA	NA	NA	TBC1D7	27735	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	13709903	13710182	13710119	Y	TBC1D7,CD83,RANBP9	RANBP9	SIRT5,NOL7	K562	ChIA-PET	22265404	RANBP9	107	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	14273453	14273611	14273548	Y	CD83	NA	JARID2,DTNBP1	IMR90	Hi-C	24141950	CD83	157581	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	14640701	14640843	14640773	Y	NA	NA	JARID2	IMR90	Hi-C	24141950	CD83	524829	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	14735052	14735658	14735282	Y	NA	NA	DTNBP1,JARID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	JARID2	508869	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	16713666	16713734	16713668	Y	ATXN1	RP1-151F17.1,ATXN1	NA	NA	NA	NA	RP1-151F17.1	45635	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	17473157	17473283	17473220	Y	NA	NA	NA	NA	NA	NA	RPL7P26	56600	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	17715315	17715544	17715493	Y	NUP153	NUP153	NUP153,KIF13A	IMR90	Hi-C	24141950	NUP153	10659	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	18308493	18308879	18308567	Y	NA	DEK	RNF144B	IMR90	Hi-C	24141950	DEK	45439	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	20868773	20869042	20868908	Y	NA	NA	NA	NA	NA	NA	CDKAL1	336085	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	21925228	21925506	21925404	Y	NA	NA	NA	NA	NA	NA	SOX4	333256	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	21947021	21947287	21947156	Y	NA	NA	NA	NA	NA	NA	SOX4	355049	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	22024666	22024942	22024815	Y	NA	NA	NA	NA	NA	NA	SOX4	432694	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	22229364	22229373	22229369	Y	NA	NA	NA	NA	NA	NA	SOX4	637392	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	25992254	25993073	25992840	Y	NA	TRIM38,HIST1H3A,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2	NA	NA	NA	NA	HIST1H3A	25645	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr6	26026306	26026795	26026679	Y	HIST1H1D,BTN3A3,BTN3A2,BTN3A2,BTN3A1,HIST1H2BD,HIST1H1E,TRIM38,HIST1H3A	HIST1H3A,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C	NA	NA	NA	NA	HIST1H3B	3493	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	26126352	26126787	26126533	Y	HIST1H4H,HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H2AE,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1C,HIST1H2AC,HIST1H4E,HIST1H1E	HFE,HIST1H4C,HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD	NA	NA	NA	NA	HIST1H2AC	3979	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	26521003	26521206	26521108	Y	HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD,HIST1H1D,BTN3A2,BTN3A2,BTN2A2,BTN2A2,BTN2A2,BTN3A1,BTN3A3,BTN2A1,BTN2A1,ABT1	HMGN4	NA	NA	NA	NA	HMGN4	15427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27145729	27146130	27146023	Y	ZNF184	HIST1H2BJ,HIST1H2AG,HIST1H2BK,HIST1H2AH,RP11-209A2.1	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-209A2.1	30893	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	27156271	27156423	27156401	Y	NA	HIST1H2BK,HIST1H2AH,RP11-209A2.1	HIST1H2BO,HIST1H2AM,OR2B2,LOC100507173,HIST1H4J,HIST1H3J,HIST1H2BK,MIR3143,HIST1H2AH,HIST1H2AI,HIST1H3H,HIST1H2BL	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-209A2.1	20600	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27205361	27205470	27205416	Y	NA	RP11-209A2.1	OR2B2,LOC100131289,ZNF184	IMR90	Hi-C	24141950	RP11-209A2.1	28338	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27640311	27640352	27640335	Y	NA	NA	ZNF391,PRSS16	IMR90	Hi-C	24141950	HIST1H2BL	133357	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27655152	27655475	27655306	Y	FKSG83,ZNF391,ZNF184,ZNF192,HIST1H3H,HIST1H2BO,HIST1H2BN,HIST1H2AM	NA	LOC100507173,ZNF184	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	HIST1H2BL	118234	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27706104	27706357	27706299	Y	NA	NA	NA	NA	NA	NA	HIST1H2BL	67352	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27740489	27740807	27740621	Y	NA	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM	NA	NA	NA	NA	HIST1H2BL	32902	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27759985	27760333	27760032	Y	ZNF391,ZNF184,ZNF193,ZNF192,PGBD1,HIST1H2BN,HIST1H2AM,HIST1H3H	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H2AK,HIST1H2BN	NA	NA	NA	NA	HIST1H2BL	13376	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	27780866	27781094	27780996	Y	ZNF184,HIST1H4L,HIST1H4K,HIST1H4J,HIST1H3J,HIST1H3I,HIST1H2BO,HIST1H2BN,HIST1H2AM,HIST1H2AL,HIST1H2AK,HIST1H1B,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2BM,HIST1H2AJ	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H2AK,HIST1H2BN,HIST1H2AL	NA	NA	NA	NA	HIST1H2BM	44	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	28101066	28101269	28101177	Y	OR2B2,ZNF187,ZKSCAN4,ZSCAN16	ZSCAN16	NA	NA	NA	NA	ZSCAN16	10728	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	28280351	28280639	28280495	Y	NA	PGBD1,ZKSCAN3	NA	NA	NA	NA	PGBD1	33037	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	28457225	28458028	28457315	Y	NA	ZSCAN23,COX11P1	NA	NA	NA	NA	COX11P1	44475	CAGE	RERF-LC-AI	hg19	FANTOM5	5.2558148245887
chr6	29568471	29568641	29568556	Y	MOG,GABBR1	NA	NA	NA	NA	NA	HLA-F	119911	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	29932777	29932958	29932802	Y	HLA-F,TRIM10,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,HLA-A	HLA-K,HLA-A,HLA-J	NA	NA	NA	NA	HLA-A	25740	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	30785907	30786494	30786279	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,FLOT1,IER3	NA	FLOT1,TUBB,VARS2,DHX16,IER3,DDR1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DDR1	55704	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	30787859	30788252	30788206	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,IER3	NA	FLOT1,TUBB,VARS2,DHX16,IER3,DDR1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DDR1	53946	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	30923441	30923743	30923649	Y	GNL1,CCHCR1,CCHCR1,DDR1	GTF2H4,VARS2	NA	NA	NA	NA	VARS2	49422	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	31705604	31706142	31705906	Y	HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,PBX2,NEU1,HSPA1L,HSPA1B,HSPA1A,GPSM3,ATF6B,AGPAT1,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1	ABHD16A,DDAH2,CLIC1,SAPCD1,VWA7	NA	NA	NA	NA	MSH5	0	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr6	31789672	31790268	31789876	Y	NA	VWA7,VARS,LSM2,HSPA1A,HSPA1B,C6orf48,NEU1	NA	NA	NA	NA	HSPA1B	3244	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr6	32075999	32076179	32076125	Y	LY6G6C,TNXB,RNF5,EGFL8,TNXB	TNXB,ATF6B,FKBPL,PPT2	NA	NA	NA	NA	TNXB	4932	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	33538911	33539356	33539169	Y	LEMD2,LEMD2,HLA-DPB1,RXRB,RPS18,B3GALT4,TAPBP,PHF1	BAK1,ITPR3	NA	NA	NA	NA	BAK1	6663	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	33792376	33792455	33792405	Y	CUTA,C6orf1	LEMD2	IP6K3,GRM4,RPS10-NUDT3,C6orf106,LEMD2,LOC100507584,MIR1275	IMR90	Hi-C	24141950	LEMD2	37463	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	33818239	33818267	33818253	Y	NA	NA	GRM4,MLN,IP6K3,LINC00336,BAK1,GGNBP1,LEMD2,LOC100507584,MIR1275	IMR90	Hi-C	24141950	LEMD2	63326	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	34358644	34359014	34358829	Y	NA	NUDT3,RPS10	NA	NA	NA	NA	NUDT3	193	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	37210217	37210497	37210343	Y	TMEM217,TMEM217	TBC1D22B,TMEM217	NA	NA	NA	NA	TBC1D22B	13051	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	42283170	42283354	42283262	Y	NA	NA	NA	NA	NA	NA	MRPS10	99567	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	42739653	42739820	42739731	Y	CUL9,TRERF1,UBR2,TBCC,C6orf226	TBCC	KIAA0240,GUCA1A,UBR2,ATP6V0CP3,PRPH2,RPL7L1,TBCC,C6orf226,TRERF1,PTCRA,PPP2R5D	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBCC	27095	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	43978439	43978901	43978686	Y	NFKBIE	C6orf223	NA	NA	NA	NA	C6orf223	12122	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	44009201	44009753	44009484	Y	SLC35B2,MRPL14	C6orf223	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	C6orf223	42884	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	44011946	44012485	44012109	Y	NA	C6orf223	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	C6orf223	45629	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	44184938	44185313	44184944	Y	MRPL14	HSP90AB1,MIR4647,SLC35B2,NFKBIE	NA	NA	NA	NA	SLC29A1	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	44396303	44396427	44396307	Y	NA	CDC5L	NA	NA	NA	NA	CDC5L	43041	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	44535263	44535485	44535399	Y	NA	NA	CLIC5	IMR90	Hi-C	24141950	CDC5L	182001	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	44634916	44635472	44635214	Y	NA	NA	CLIC5,SUPT3H,RUNX2	IMR90	Hi-C	24141950	CDC5L	281654	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	45298832	45299186	45298935	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	44504	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	45302184	45302302	45302245	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	41388	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	45413515	45413853	45413708	Y	RUNX2	NA	NA	NA	NA	NA	SUPT3H	69825	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	45618234	45618676	45618425	Y	RUNX2	NA	RUNX2,SUPT3H,CLIC5	IMR90	Hi-C	24141950	SUPT3H	274544	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr6	45623562	45623937	45623654	Y	NA	NA	RUNX2,SUPT3H,CLIC5	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SUPT3H	279872	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	47263537	47263554	47263549	Y	NA	TNFRSF21	NA	NA	NA	NA	TNFRSF21	12087	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	48794608	48794845	48794713	Y	NA	NA	NA	NA	NA	NA	MUT	634059	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	50818020	50818494	50818241	Y	NA	RPS17P5	NA	NA	NA	NA	RPS17P5	4881	CAGE	RERF-LC-AI	hg19	FANTOM5	3.23434758436227
chr6	52217307	52217701	52217502	Y	NA	PAQR8	PAQR8,MCM3,EFHC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PAQR8	6518	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	52404444	52404567	52404560	Y	NA	TRAM2	EFHC1	IMR90	Hi-C	24141950	TRAM2	35146	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	53224045	53224723	53224315	Y	NA	ELOVL5	ELOVL5	K562	ChIA-PET	22265404	ELOVL5	12098	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	53412768	53413364	53413026	Y	GCLC	NA	NA	NA	NA	NA	GCLC	66404	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	56543882	56543906	56543894	Y	NA	NA	DST	IMR90	Hi-C	24141950	BEND6	273867	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	56811664	56812033	56811848	Y	NA	BEND6	BEND6,KIAA1586,ZNF451,PRIM2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	BEND6	5740	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	57052407	57052730	57052411	Y	NA	BAG2,RAB23	NA	NA	NA	NA	BAG2	17283	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	57408924	57409255	57409252	Y	NA	NA	NA	NA	NA	NA	PRIM2	231321	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	58777244	58778438	58777771	Y	NA	NA	NA	NA	NA	NA	GUSBP4	522675	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	73354930	73355043	73354987	Y	NA	KCNQ5	NA	NA	NA	NA	KCNQ5	25410	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	86113432	86113601	86113525	Y	NT5E	RP11-30P6.6,NT5E	NT5E,SNX14	IMR90	Hi-C	24141950	RP11-30P6.6	15528	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	86114496	86114829	86114663	Y	NT5E	RP11-30P6.6,NT5E	NT5E,SNX14	IMR90	Hi-C	24141950	RP11-30P6.6	16592	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr6	86174491	86174911	86174693	Y	NA	NT5E	NA	NA	NA	NA	NT5E	16682	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	89758081	89758394	89758222	Y	UBE2J1,PNRC1	PNRC1	PNRC1	MCF7	ChIA-PET	22265404	PNRC1	30076	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	90856849	90857084	90856969	Y	NA	NA	NA	NA	NA	NA	BACH2	147543	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	94860177	94860339	94860258	Y	NA	NA	NA	NA	NA	NA	MANEA	1163080	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	100051584	100051769	100051603	Y	NA	CCNC,PRDM13	NA	NA	NA	NA	PRDM13	837	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	105388915	105389637	105389155	Y	HACE1	NA	NA	NA	NA	NA	HACE1	83121	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	108879521	108879931	108879808	Y	SESN1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	483	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	108883670	108884545	108884024	Y	OSTM1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	4632	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	114176108	114176553	114176196	Y	MARCKS	NA	NA	NA	NA	NA	MARCKS	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	114318333	114318559	114318390	Y	NA	RP3-399L15.3,HDAC2	NA	NA	NA	NA	HDAC2	11913	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	117804575	117804878	117804739	Y	NA	DCBLD1	NA	NA	NA	NA	DCBLD1	31595	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	117937053	117937396	117937164	Y	NA	GOPC	ROS1	IMR90	Hi-C	24141950	GOPC	15362	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	124461592	124461753	124461671	Y	NA	NA	NA	NA	NA	NA	RNF217	819938	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	129480057	129480411	129480316	Y	NA	NA	NA	NA	NA	NA	ARHGAP18	548959	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	129822485	129822770	129822701	Y	NA	NA	NA	NA	NA	NA	ARHGAP18	206600	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	129855341	129855708	129855581	Y	ARHGAP18	NA	NA	NA	NA	NA	ARHGAP18	173662	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	130005105	130005433	130005370	Y	L3MBTL3,ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	23937	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	130342212	130342458	130342393	Y	SAMD3,SAMD3,L3MBTL3	L3MBTL3	NA	NA	NA	NA	L3MBTL3	9368	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	130922387	130922557	130922422	Y	NA	NA	NA	NA	NA	NA	TMEM200A	237508	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	131929733	131930009	131929873	Y	NA	MED23	NA	NA	NA	NA	MED23	17360	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	133134288	133134908	133134317	Y	NA	RPS12	NA	NA	NA	NA	SNORD101	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	134264415	134264799	134264607	Y	NA	TBPL1	TBPL1,SLC2A12	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	TBPL1	6509	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	134741718	134742020	134741875	Y	SGK1,SGK1,SGK1	NA	SGK1,LOC154092,ALDH8A1	IMR90	Hi-C	24141950	SGK1	104468	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	135039766	135040264	135039978	Y	NA	NA	SGK1,ALDH8A1,LOC154092	IMR90	Hi-C	24141950	RP11-557H15.4	60792	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	135352829	135352991	135352910	Y	NA	NA	NA	NA	NA	NA	HBS1L	69203	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	136312028	136312251	136312140	Y	NA	NA	NA	NA	NA	NA	BCLAF1	296738	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	137082760	137083090	137082822	Y	MAP3K5	MAP3K5	NA	NA	NA	NA	MAP3K5	28566	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	137109342	137109643	137109396	Y	IFNGR1,BCLAF1,MAP3K5	MAP3K5,PEX7	NA	NA	NA	NA	MAP3K5	2013	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	138353782	138354071	138353975	Y	NA	NA	PERP	MCF7	ChIA-PET	22265404	PERP	72577	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	143026336	143026552	143026444	Y	NA	NA	AIG1,ADAT2,LOC100507489,HIVEP2,LOC153910,PEX3	IMR90	Hi-C	24141950	HIVEP2	237786	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	143206296	143206927	143206703	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	57411	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr6	143223836	143224147	143224035	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	40191	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	143247398	143248213	143248022	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	16125	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr6	143471502	143471640	143471571	Y	NA	NA	NA	NA	NA	NA	AIG1	91869	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	144384858	144385125	144384924	Y	NA	PLAGL1,SF3B5	NA	NA	NA	NA	PLAGL1	1123	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	145147432	145147802	145147573	Y	NA	NA	NA	NA	NA	NA	TPT1P4	627330	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	148588961	148589218	148589102	Y	UST	SASH1	SASH1	IMR90	Hi-C	24141950	SASH1	2222	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	150955970	150956257	150955981	Y	PLEKHG1	PLEKHG1	NA	NA	NA	NA	PLEKHG1	36971	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	150963010	150963101	150963056	Y	PLEKHG1	PLEKHG1	NA	NA	NA	NA	PLEKHG1	44011	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	151815811	151815987	151815867	Y	ESR1,ESR1,ESR1,ESR1,C6orf97	RMND1,C6orf211	NA	NA	NA	NA	C6orf211	44389	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	152064394	152064417	152064406	Y	NA	NA	NA	NA	NA	NA	ESR1	88568	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	155429024	155429129	155429079	Y	NA	NA	NA	NA	NA	NA	RP11-477D19.2	146729	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	157007979	157008724	157008580	Y	ARID1B	NA	MIR4466,ARID1B,NOX3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ARID1B	88339	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr6	157041058	157041538	157041248	Y	ARID1B	NA	ARID1B,MIR4466	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	ARID1B	55525	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	158254729	158255396	158255020	Y	NA	SNX9	NA	NA	NA	NA	SNX9	12433	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	158375265	158375579	158375328	Y	NA	SYNJ2	NA	NA	NA	NA	SYNJ2	25309	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	158463343	158463878	158463391	Y	SNX9,SYNJ2	NA	NA	NA	NA	NA	SYNJ2	62455	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr6	158464788	158465005	158464892	Y	NA	NA	NA	NA	NA	NA	SYNJ2	63900	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	158478416	158478907	158478642	Y	NA	NA	NA	NA	NA	NA	SYNJ2	77528	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	158981403	158981866	158981661	Y	NA	NA	NA	NA	NA	NA	DYNLT1	81905	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	159234698	159235091	159235070	Y	NA	EZR	NA	NA	NA	NA	EZR	3353	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	159270971	159271326	159271104	Y	TAGAP,SYTL3,EZR,EZR	EZR,C6orf99	NA	NA	NA	NA	C6orf99	17645	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr6	160141572	160141909	160141740	Y	MAS1,IGF2R,SOD2,WTAP,WTAP	WTAP,ACAT2,SOD2	LOC100129518,ACAT2,WTAP,SOD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WTAP	2708	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	161678868	161678882	161678875	Y	NA	AGPAT4	MAP3K4	IMR90	Hi-C	24141950	AGPAT4	14211	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	161855973	161856365	161856002	Y	NA	NA	NA	NA	NA	NA	AGPAT4	162880	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	163833938	163834442	163834340	Y	NA	QKI	NA	NA	NA	NA	QKI	906	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr6	166364914	166365167	166365041	Y	T	NA	NA	NA	NA	NA	SFT2D1	388912	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	166422302	166422862	166422743	Y	NA	NA	NA	NA	NA	NA	SFT2D1	331217	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	168493730	168493970	168493824	Y	NA	NA	NA	NA	NA	NA	KIF25-AS1	97973	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	168689987	168690088	168690047	Y	FRMD1	NA	NA	NA	NA	NA	KIF25-AS1	294230	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr6	170600439	170600921	170600644	Y	NA	DLL1,FAM120B	NA	NA	NA	NA	FAM120B	2648	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr7	373094	373351	373247	Y	PRKAR1B	NA	FLJ44511,PDGFA	MCF7	ChIA-PET	22265404	FAM20C	182125	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	577876	578141	578015	Y	PRKAR1B,PRKAR1B,HEATR2,GET4,PDGFA	PDGFA	NA	NA	NA	NA	PDGFA	19943	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	627421	627837	627508	Y	NA	NA	NA	NA	NA	NA	PDGFA	69488	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	1329910	1330257	1330187	Y	NA	NA	UNCX	IMR90	Hi-C	24141950	ZFAND2A	131515	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	1416814	1417157	1416984	Y	NA	NA	NA	NA	NA	NA	MICALL2	79981	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	1560213	1560697	1560426	Y	C7orf50,TMEM184A,PSMG3,PSMG3,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	7653	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	1571273	1571500	1571366	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	2923	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	1572262	1572844	1572636	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	3912	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	1573524	1573718	1573598	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	5174	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	2575019	2575461	2575251	Y	NA	LFNG,BRAT1,IQCE	NA	NA	NA	NA	BRAT1	17900	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	2681143	2681305	2681209	Y	SNX8,LFNG,LFNG,TTYH3	TTYH3,AMZ1	NA	NA	NA	NA	TTYH3	11558	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	3885202	3885340	3885271	Y	NA	NA	NA	NA	NA	NA	FOXK1	796048	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	4764796	4765177	4765030	Y	KIAA0415	NA	NA	NA	NA	NA	FOXK1	83408	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	5452779	5453024	5452968	Y	NA	TNRC18	NA	NA	NA	NA	TNRC18	10021	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	5594554	5594977	5594837	Y	WIPI2	FBXL18,ACTB,FSCN1	RNF216,FBXL18,TNRC18	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ACTB	6438	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	5609541	5610012	5609880	Y	SLC29A4,TNRC18,FBXL18,FSCN1	ACTB,FSCN1	RNF216,FSCN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACTB	8126	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	5724329	5724708	5724518	Y	NA	NA	NA	NA	NA	NA	FSCN1	93890	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	7197591	7197789	7197703	Y	C1GALT1	C1GALT1	COL28A1	IMR90	Hi-C	24141950	C1GALT1	3026	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	8300852	8301132	8300960	Y	ICA1,ICA1,ICA1	AC007009.1,ICA1	NA	NA	NA	NA	ICA1	535	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	12759659	12759934	12759702	Y	ARL4A,ARL4A	ARL4A	ARL4A	K562	ChIA-PET	22265404	ARL4A	35178	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	17029591	17029925	17029620	Y	NA	NA	AHR	IMR90	Hi-C	24141950	AHR	306321	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	18575593	18575869	18575740	Y	HDAC9,HDAC9,HDAC9	NA	NA	NA	NA	NA	TWIST1	579426	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	18695404	18695888	18695683	Y	NA	NA	NA	NA	NA	NA	TWIST1	459407	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	20582388	20582432	20582424	Y	ITGB8	NA	NA	NA	NA	NA	ITGB8	214063	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	22122992	22123068	22123014	Y	NA	NA	RAPGEF5	IMR90	Hi-C	24141950	CDCA7L	139290	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	22398962	22399217	22399216	Y	NA	NA	NA	NA	NA	NA	EEF1A1P6	150401	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	22609345	22610034	22609690	Y	IL6	NA	NA	NA	NA	NA	EEF1A1P6	59727	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	22614875	22615270	22614981	Y	IL6	NA	NA	NA	NA	NA	STEAP1B	55274	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	22622740	22623204	22623070	Y	NA	STEAP1B	NA	NA	NA	NA	STEAP1B	47340	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	22631710	22632105	22631870	Y	IL6	STEAP1B	NA	NA	NA	NA	STEAP1B	38439	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	22757674	22758207	22757934	Y	NA	IL6,AC073072.5	NA	NA	NA	NA	IL6	5296	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	22894313	22894860	22894668	Y	STEAP1B,TOMM7	TOMM7,AC005682.5	NA	NA	NA	NA	AC005682.5	2516	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	23229571	23229876	23229614	Y	NA	NUPL2,GPNMB	NA	NA	NA	NA	NUPL2	10125	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	23348040	23348443	23348292	Y	KLHL7,KLHL7,NUPL2,IGF2BP3	NA	NA	NA	NA	NA	GPNMB	74454	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	23510676	23511223	23510889	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3	NA	NA	NA	NA	IGF2BP3	2590	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	23513815	23514383	23514045	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3	MALSU1	K562	ChIA-PET	22265404	IGF2BP3	5729	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	24813861	24813988	24813926	Y	OSBPL3	DFNA5	DFNA5,OSBPL3	IMR90	Hi-C	24141950	DFNA5	6617	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	25064852	25065012	25064919	Y	NA	OSBPL3	OSBPL3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	OSBPL3	45599	CAGE	RERF-LC-AI	hg19	FANTOM5	5.66010827263398
chr7	25068217	25068495	25068356	Y	NA	OSBPL3	OSBPL3	IMR90	Hi-C	24141950	OSBPL3	48964	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	25071903	25072051	25071977	Y	NA	NA	OSBPL3	IMR90	Hi-C	24141950	OSBPL3	52650	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	25892049	25892317	25892170	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2	IMR90	Hi-C	24141950	NFE2L3	297543	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	25893186	25893494	25893422	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1	IMR90	Hi-C	24141950	NFE2L3	296366	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	25896245	25896461	25896419	Y	NA	NA	HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NFE2L3	293399	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	25990725	25991211	25991018	Y	NA	NA	NA	NA	NA	NA	NFE2L3	198649	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	26193570	26193972	26193862	Y	SNX10,SNX10,HNRNPA2B1	NFE2L3,CBX3,HNRNPA2B1	NA	NA	NA	NA	NFE2L3	3710	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	27143635	27143783	27143725	Y	NA	HOXA2,HOXA-AS2,HOXA5,HOXA6,HOXA3	NA	NA	NA	NA	HOXA-AS2	1613	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	27717680	27717897	27717733	Y	NA	HIBADH	HOTTIP,HOXA13,HIBADH,TAX1BP1,JAZF1	IMR90	Hi-C	24141950	HIBADH	17066	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	28076890	28077172	28076964	Y	CREB5	NA	NA	NA	NA	NA	JAZF1-AS1	140769	CAGE	RERF-LC-AI	hg19	FANTOM5	5.2558148245887
chr7	28205904	28206253	28206092	Y	NA	JAZF1-AS1,JAZF1	NA	NA	NA	NA	JAZF1-AS1	11688	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	30257510	30257901	30257519	Y	NA	NA	NA	NA	NA	NA	ZNRF2	64022	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	32026855	32027150	32027002	Y	NA	NA	NA	NA	NA	NA	LSM5	505745	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	33943577	33943776	33943645	Y	NA	BMPER	NA	NA	NA	NA	BMPER	1054	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	34019230	34019836	34019529	Y	NA	NA	NA	NA	NA	NA	BMPER	76707	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	36480174	36480717	36480189	Y	NA	NA	NA	NA	NA	NA	KIAA0895	52440	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	37221797	37222057	37221923	Y	NA	NA	NA	NA	NA	NA	ELMO1	264795	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	41872538	41872895	41872765	Y	INHBA	NA	C7orf10	IMR90	Hi-C	24141950	GLI3	402574	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	41909567	41909969	41909883	Y	NA	NA	LOC285954,C7orf10	IMR90	Hi-C	24141950	GLI3	365500	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	42120488	42120725	42120693	Y	NA	NA	NA	NA	NA	NA	GLI3	154744	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	42927750	42928726	42928340	Y	NA	C7orf25,MRPL32,PSMA2	NA	NA	NA	NA	C7orf25	21178	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr7	43740255	43740653	43740556	Y	GCK	NA	NA	NA	NA	NA	BLVRA	55626	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	43959007	43959429	43959215	Y	NA	URGCP,UBE2D4	NA	NA	NA	NA	URGCP	4581	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	44677628	44678244	44677873	Y	ZMIZ2,ZMIZ2,PURB,MYO1G,OGDH	OGDH	ZMIZ2	IMR90	Hi-C	24141950	OGDH	33457	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	44775082	44775384	44775244	Y	OGDH,PURB,MYO1G,ZMIZ2,ZMIZ2	ZMIZ2	DDX56,TMED4,OGDH,PPIA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZMIZ2	10796	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	47612587	47612873	47612749	Y	NA	TNS3	NA	NA	NA	NA	TNS3	7283	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	47631233	47631542	47631345	Y	C7orf69,TNS3	TNS3	TNS3,LINC00525,C7orf69,PKD1L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNS3	11077	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	47709189	47709374	47709294	Y	UPP1,UPP1,HUS1	NA	NA	NA	NA	NA	TNS3	89033	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	47823605	47823820	47823740	Y	TNS3	NA	NA	NA	NA	NA	HUS1	193358	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	48127053	48127182	48127123	Y	HUS1,UPP1,UPP1	UPP1	NA	NA	NA	NA	UPP1	828	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	50237139	50237380	50237343	Y	NA	NA	COBL	IMR90	Hi-C	24141950	FIGNL1	278708	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	50682806	50683075	50682899	Y	DDC	NA	NA	NA	NA	NA	FIGNL1	166718	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	51370562	51370701	51370648	Y	COBL	NA	NA	NA	NA	NA	GRB10	511403	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	55131480	55131905	55131522	Y	EGFR	EGFR	NA	NA	NA	NA	EGFR	46766	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	55132578	55133258	55132929	Y	SEC61G,EGFR	EGFR	NA	NA	NA	NA	EGFR	47864	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	55141624	55142112	55141893	Y	SEC61G,EGFR	NA	NA	NA	NA	NA	EGFR	56910	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	55146809	55147410	55146997	Y	NA	NA	NA	NA	NA	NA	EGFR	62095	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr7	55200352	55201043	55200686	Y	SEC61G,EGFR	NA	NA	NA	NA	NA	EGFR	115638	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	55201472	55201858	55201601	Y	SEC61G	NA	NA	NA	NA	NA	EGFR	116758	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	55322570	55322956	55322611	Y	EGFR	NA	EGFR,SEC61G	IMR90	Hi-C	24141950	LANCL2	108185	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	55529793	55530311	55530129	Y	ZNF713,VOPP1	NA	NA	NA	NA	NA	LANCL2	98652	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	73062013	73062614	73062579	Y	BAZ1B,ABHD11,MLXIPL,STX1A	MLXIPL,WBSCR22,DNAJC30	MLXIPL,MIR4284,WBSCR22,STX1A	IMR90	Hi-C	24141950	MLXIPL	25140	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	73694024	73694283	73694118	Y	LAT2	RFC2,CLIP2	CLIP2	IMR90	Hi-C	24141950	CLIP2	7522	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	75465283	75465439	75465360	Y	MDH2	RHBDD2	STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR	IMR90	Hi-C	24141950	RHBDD2	4481	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	75993825	75994303	75994024	Y	NA	YWHAG,ZP3	YWHAG	MCF7	ChIA-PET	22265404	YWHAG	7477	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	77177634	77177834	77177685	Y	FGL2,PION,PTPN12,PTPN12	PTPN12	NA	NA	NA	NA	PTPN12	13042	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	78412122	78412354	78412238	Y	NA	NA	NA	NA	NA	NA	MAGI2-AS3	667844	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	80251972	80252338	80252155	Y	NA	NA	NA	NA	NA	NA	SEMA3C	297337	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	84267436	84267624	84267532	Y	NA	NA	SEMA3A	IMR90	Hi-C	24141950	SEMA3A	147396	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	90637974	90638276	90638003	Y	NA	NA	NA	NA	NA	NA	CDK14	544236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	92439060	92439368	92439205	Y	PEX1,C7orf64,FAM133B,SAMD9	CDK6	NA	NA	NA	NA	CDK6	24540	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	93567669	93567854	93567798	Y	NA	TFPI2,GNG11	NA	NA	NA	NA	GNG11	18658	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	93812688	93813130	93812921	Y	NA	NA	TFPI2,BET1,GNGT1	IMR90	Hi-C	24141950	BET1	180994	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	97763037	97763356	97763224	Y	BRI3,LMTK2	LMTK2	NA	NA	NA	NA	LMTK2	28840	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	97913424	97913987	97913861	Y	LMTK2,BRI3	TECPR1,BRI3	NA	NA	NA	NA	BRI3	33733	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	97915595	97916070	97915699	Y	LMTK2,BRI3	TECPR1,BRI3	NA	NA	NA	NA	BRI3	35904	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	98048213	98048460	98048408	Y	BRI3	BAIAP2L1	BAIAP2L1,TRRAP,TMEM130	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BAIAP2L1	19833	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	98247636	98247817	98247690	Y	NA	NPTX2	NA	NA	NA	NA	NPTX2	3027	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	98973055	98973209	98973129	Y	ZNF655,ZNF655,ZNF394,ARPC1B	ARPC1B,BUD31,PDAP1	NA	NA	NA	NA	ARPC1B	3183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	99684818	99685168	99684993	Y	TSC22D4,PILRB,PILRA	ZSCAN21,ZNF3,COPS6,AP4M1,MCM7,CNPY4,TAF6,RP11-506M12.1	NA	NA	NA	NA	COPS6	241	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	99962576	99962959	99962740	Y	MCM7,C7orf43,ZCWPW1,TSC22D4,SLC12A9,MEPCE,LRCH4,GNB2,GIGYF1,PILRB,PILRA	PILRB,PMS2P1	PILRA	IMR90	Hi-C	24141950	PMS2P1	25045	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	99963158	99963846	99963542	Y	ZCWPW1,MEPCE,PILRA	PILRB,PMS2P1	PILRA	IMR90	Hi-C	24141950	PMS2P1	25627	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	99966641	99967146	99966944	Y	C7orf59,ZCWPW1,TSC22D4,SLC12A9,MEPCE,LRCH4,GNB2,PILRB,PILRA	PILRB,PMS2P1	PILRA	IMR90	Hi-C	24141950	PMS2P1	29110	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	100342957	100343164	100343095	Y	NA	POP7	NA	NA	NA	NA	POP7	41281	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	100743461	100743946	100743576	Y	GNB2,TRIM56	TRIM56,SERPINE1	SERPINE1	IMR90	Hi-C	24141950	TRIM56	16741	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	100757831	100758077	100757885	Y	NA	TRIM56,SERPINE1,AP1S1,VGF	NA	NA	NA	NA	SERPINE1	10293	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	100760673	100761017	100760905	Y	GNB2,EPHB4,ZNHIT1,PLOD3,AP1S1,SERPINE1	TRIM56,SERPINE1,AP1S1,VGF	AP1S1,VGF	MCF7	ChIA-PET	22265404	SERPINE1	7353	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	101372678	101373024	101372861	Y	NA	NA	CUX1,EMID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CUX1	83935	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	101526005	101526525	101526438	Y	SH2B2,CUX1,CUX1	NA	NA	NA	NA	NA	CUX1	69046	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	101929978	101930313	101930074	Y	CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2	NA	NA	NA	NA	NA	PRKRIP1	72006	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	104626890	104627731	104627241	Y	MLL5	LINC01004	NA	NA	NA	NA	LINC01004	23760	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	105459888	105460220	105459903	Y	NA	CTA-351J1.1	NA	NA	NA	NA	CTA-351J1.1	1950	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	105705488	105705603	105705542	Y	NA	SYPL1	ATXN7L1,SYPL1,CDHR3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SYPL1	45419	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	107567788	107568066	107567911	Y	NA	DLD	NA	NA	NA	NA	DLD	38373	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	111764528	111764737	111764684	Y	ZNF277,IFRD1,IFRD1,DOCK4	NA	NA	NA	NA	NA	DOCK4	79729	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	113724652	113724941	113724845	Y	FOXP2	FOXP2	NA	NA	NA	NA	FOXP2	270	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	114677768	114677789	114677777	Y	MDFIC	NA	NA	NA	NA	NA	MDFIC	117559	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	115955390	115955624	115955546	Y	NA	CAV2,AC073130.3	CAV1,CAV2,TES,CAPZA2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC073130.3	10326	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	115995232	115995555	115995330	Y	CAV2,CAV2,CAV1,CAV1,CAV1,CAV1	AC073130.3	CAV2,CAV1,TES,MET	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC073130.3	29282	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	116181805	116181927	116181813	Y	CAV1,CAV1	AC002066.1,CAV1	NA	NA	NA	NA	CAV1	18966	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	116202174	116202561	116202326	Y	CAV2,CAV2,CAV1,CAV1,CAV1,CAV1	CAV1	NA	NA	NA	NA	CAV1	39335	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	116328034	116328226	116328184	Y	ST7,CAV2,CAV2,CAV1,CAV1,MET	MET	NA	NA	NA	NA	MET	17590	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	116651956	116652355	116652105	Y	NA	NA	NA	NA	NA	NA	ST7-AS1	59568	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	120703433	120703512	120703470	Y	NA	NA	NA	NA	NA	NA	ING3	114630	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	121116174	121116412	121116295	Y	NA	NA	NA	NA	NA	NA	FAM3C	81756	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	121150464	121150828	121150695	Y	NA	NA	NA	NA	NA	NA	FAM3C	116046	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	121170486	121170616	121170551	Y	NA	NA	FAM3C,WNT16	IMR90	Hi-C	24141950	FAM3C	136068	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	123387767	123387941	123387854	Y	NA	WASL	NA	NA	NA	NA	WASL	646	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	127775885	127775901	127775893	Y	NA	NA	SND1,MIR129-1	IMR90	Hi-C	24141950	RBM28	206061	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	128170830	128171695	128171212	Y	NA	RP11-212P7.1	IMPDH1,HILPDA,METTL2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-212P7.1	37047	CAGE	RERF-LC-AI	hg19	FANTOM5	4.85152137654341
chr7	128383172	128383597	128383318	Y	NA	CALU,CCDC136	NA	NA	NA	NA	CALU	5826	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	128468302	128468509	128468385	Y	FLNC	CCDC136,ATP6V1F	NA	NA	NA	NA	FLNC	0	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	129419876	129420343	129420085	Y	NA	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	NRF1	170321	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	129465628	129465864	129465722	Y	NA	NA	NA	NA	NA	NA	UBE2H	124925	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	130581597	130582393	130581985	Y	NA	MIR29A	NA	NA	NA	NA	MIR29A	13676	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	130593505	130595916	130594870	Y	NA	MIR29A	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MIR29A	153	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	130602337	130602820	130602733	Y	MKLN1,MKLN1	MIR29A	FLJ43663	IMR90	Hi-C	24141950	MIR29A	6268	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	130873403	130873921	130873619	Y	MKLN1,MKLN1	NA	NA	NA	NA	NA	LINC-PINT	80468	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	131314351	131314532	131314442	Y	NA	NA	PODXL,MKLN1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PODXL	73375	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	133223721	133224093	133223724	Y	NA	NA	NA	NA	NA	NA	EXOC4	287892	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	134117156	134117311	134117298	Y	NA	AKR1B1	NA	NA	NA	NA	AKR1B1	24725	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	134475089	134475514	134475151	Y	CALD1	CALD1	NA	NA	NA	NA	CALD1	48086	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	135446640	135446883	135446777	Y	FAM180A	NA	C7orf73,SLC13A4	IMR90	Hi-C	24141950	C7orf73	101396	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	135815346	135815684	135815515	Y	NA	NA	NA	NA	NA	NA	MTPN	155245	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	137311444	137311452	137311448	Y	NA	NA	NA	NA	NA	NA	DGKI	218386	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	137387266	137387617	137387499	Y	NA	NA	NA	NA	NA	NA	DGKI	142221	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	137457622	137457847	137457706	Y	NA	NA	NA	NA	NA	NA	DGKI	71991	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	139365521	139365926	139365718	Y	NA	NA	NA	NA	NA	NA	HIPK2	109651	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	139367160	139367381	139367316	Y	NA	NA	NA	NA	NA	NA	HIPK2	108196	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	143083267	143084129	143083354	Y	TAS2R40,FAM131B,FAM131B	AC093673.5,ZYX	NA	NA	NA	NA	ZYX	7094	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	148638273	148638633	148638462	Y	NA	NA	EZH2,ZNF786,ZNF398,ZNF425,CUL1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EZH2	58860	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr7	148680544	148680840	148680694	Y	NA	PDIA4	NA	NA	NA	NA	PDIA4	42893	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	148788628	148788884	148788863	Y	ZNF783,CUL1,EZH2,ZNF786,ZNF398	ZNF786,ZNF425,ZNF398	NA	NA	NA	NA	ZNF786	2754	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	149413428	149413754	149413591	Y	NA	KRBA1	NA	NA	NA	NA	KRBA1	3556	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	149468740	149469267	149468803	Y	NA	ZNF467	NA	NA	NA	NA	ZNF467	172	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr7	151198552	151198933	151198803	Y	AGAP3,PRKAG2,PRKAG2	RHEB	CRYGN	IMR90	Hi-C	24141950	RHEB	16273	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	151452177	151452367	151452235	Y	SMARCD3,SMARCD3,RHEB,PRKAG2,PRKAG2	NA	NA	NA	NA	NA	PRKAG2-AS1	119760	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	151453235	151453789	151453377	Y	SMARCD3,SMARCD3,RHEB,PRKAG2,PRKAG2	NA	NA	NA	NA	NA	PRKAG2-AS1	118338	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	151493401	151493985	151493754	Y	RHEB,PRKAG2,PRKAG2	NA	NA	NA	NA	NA	PRKAG2-AS1	78142	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	152160343	152160554	152160402	Y	ACTR3B	NA	NA	NA	NA	NA	XRCC2	210696	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	152161348	152162014	152161594	Y	NA	NA	NA	NA	NA	NA	XRCC2	209236	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	154742897	154743129	154742996	Y	NA	PAXIP1	NA	NA	NA	NA	PAXIP1	49665	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	155276719	155276807	155276762	Y	PAXIP1,CNPY1	NA	NA	NA	NA	NA	RBM33	158338	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr7	155744375	155744769	155744531	Y	NA	NA	LOC285889,SHH,LMBR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SHH	141408	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	155754558	155754796	155754722	Y	NA	NA	LOC285889	IMR90	Hi-C	24141950	SHH	151591	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr7	157071910	157072285	157071928	Y	NA	NA	NA	NA	NA	NA	DNAJB6	53790	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	157092515	157093215	157092989	Y	DNAJB6,DNAJB6	DNAJB6	UBE3C,DNAJB6	IMR90	Hi-C	24141950	DNAJB6	32860	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	157334866	157335140	157335002	Y	DNAJB6,DNAJB6	NA	NA	NA	NA	NA	DNAJB6	208791	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr7	158765978	158766170	158766074	Y	NA	NA	NCAPG2	IMR90	Hi-C	24141950	WDR60	118709	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	637812	637858	637835	Y	NA	ERICH1	NA	NA	NA	NA	ERICH1	48248	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	638062	638589	638348	Y	ZNF596,ZNF596,ERICH1	ERICH1	NA	NA	NA	NA	ERICH1	47517	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr8	1736486	1736690	1736554	Y	NA	CLN8,CTD-2336O2.1,ARHGEF10	NA	NA	NA	NA	CTD-2336O2.1	25818	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	2263330	2263439	2263406	Y	NA	NA	NA	NA	NA	NA	KBTBD11	343286	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr8	4848301	4848393	4848346	Y	CSMD1	NA	NA	NA	NA	NA	PAICSP4	205447	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	8143963	8144303	8144234	Y	NA	NA	SGK223,CLDN23,MFHAS1	IMR90	Hi-C	24141950	SGK223	97705	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	8153597	8154098	8153801	Y	NA	NA	MFHAS1,SGK223,CLDN23,FLJ10661	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SGK223	87910	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	8932382	8932915	8932599	Y	CLDN23,PPP1R3B	NA	PPP1R3B,ERI1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PPP1R3B	74169	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	8935191	8935379	8935249	Y	NA	NA	ERI1,PPP1R3B,TNKS	IMR90	Hi-C	24141950	PPP1R3B	71705	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	9219931	9220273	9220102	Y	PPP1R3B	NA	NA	NA	NA	NA	RP11-10A14.5	175410	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	10191869	10192038	10191953	Y	NA	NA	NA	NA	NA	NA	MSRA	282091	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	10573649	10573859	10573801	Y	SOX7	NA	NA	NA	NA	NA	SOX7	121498	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	11312887	11313950	11313920	Y	NA	FAM167A,BLK	NA	NA	NA	NA	FAM167A	16274	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr8	11314255	11315026	11314813	Y	XKR6,MTMR9,FAM167A	FAM167A,BLK	NA	NA	NA	NA	FAM167A	15198	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	11337266	11337614	11337440	Y	FAM167A	FAM167A,BLK	C8orf12,BLK	IMR90	Hi-C	24141950	FAM167A	7042	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	11373324	11373814	11373559	Y	FAM167A	FAM167A,BLK	NA	NA	NA	NA	BLK	23814	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	11558749	11558994	11558836	Y	GATA4	GATA4	NA	NA	NA	NA	GATA4	26281	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	11734631	11734824	11734746	Y	CTSB	CTSB	CTSB,BLK,FDFT1,FAM167A	IMR90	Hi-C	24141950	CTSB	9674	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	11735335	11735756	11735393	Y	CTSB	CTSB	CTSB,BLK,FDFT1,FAM167A	IMR90	Hi-C	24141950	CTSB	10378	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	11743673	11744020	11743863	Y	CTSB	CTSB	CTSB,FAM167A,FDFT1,BLK,NEIL2,GATA4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CTSB	18716	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	13224231	13224684	13224410	Y	NA	NA	NA	NA	NA	NA	DLC1	146483	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	20055803	20056436	20056187	Y	ATP6V1B2	ATP6V1B2	NA	NA	NA	NA	ATP6V1B2	2925	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	20182767	20183137	20182952	Y	NA	LZTS1	ATP6V1B2,LZTS1	IMR90	Hi-C	24141950	LZTS1	23293	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	21999982	22000221	22000101	Y	POLR3D	NUDT18,REEP4,BMP1	NA	NA	NA	NA	REEP4	2518	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	22403598	22403975	22403915	Y	NA	SORBS3,PDLIM2	NA	NA	NA	NA	SORBS3	3099	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	22710401	22710511	22710455	Y	NA	NA	NA	NA	NA	NA	RHOBTB2	132419	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	22858322	22858618	22858470	Y	EGR3,EGR3,RHOBTB2,RHOBTB2	RHOBTB2	NA	NA	NA	NA	RHOBTB2	15392	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	23202733	23203217	23203148	Y	LOXL2	NA	NA	NA	NA	NA	R3HCC1	77100	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	23618921	23619563	23619216	Y	ENTPD4,ENTPD4	NA	STC1,ENTPD4	IMR90	Hi-C	24141950	NKX3-1	80481	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	23655999	23656321	23656218	Y	STC1	NA	STC1,SLC25A37	IMR90	Hi-C	24141950	STC1	53999	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	26306627	26307336	26307213	Y	NA	NA	BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PNMA2	62272	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	26437404	26437761	26437433	Y	PNMA2,DPYSL2,DPYSL2	NA	NA	NA	NA	NA	DPYSL2	67613	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	26466894	26467238	26467101	Y	NA	NA	NA	NA	NA	NA	DPYSL2	97103	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	28258528	28258941	28258737	Y	HMBOX1,HMBOX1	ZNF395	ZNF395,FBXO16	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF395	310	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	28269273	28269920	28269515	Y	ZNF395	ZNF395	NA	NA	NA	NA	ZNF395	11055	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	29630716	29630847	29630782	Y	NA	AC145110.1	C8orf75,LOC286135	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC145110.1	26891	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	29948448	29949236	29948548	Y	TMEM66,LEPROTL1	TMEM66,LEPROTL1,RPS15AP24	NA	NA	NA	NA	LEPROTL1	1678	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	30769723	30770025	30769859	Y	NA	NA	TEX15,WRN,PPP2CB,PURG	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPP2CB	99893	CAGE	RERF-LC-AI	hg19	FANTOM5	6.87298861676983
chr8	30820542	30820686	30820610	Y	NA	NA	NA	NA	NA	NA	PURG	68545	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	38794203	38794537	38794324	Y	TACC1,PLEKHA2	PLEKHA2	NA	NA	NA	NA	PLEKHA2	37450	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	38794582	38795442	38794757	Y	TACC1,PLEKHA2	PLEKHA2	NA	NA	NA	NA	PLEKHA2	37829	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	38856419	38857534	38856583	Y	NA	TM2D2,ADAM9	NA	NA	NA	NA	ADAM9	4031	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	41908079	41908836	41908505	Y	POLB,IKBKB,IKBKB,AP3M2,AGPAT6,MYST3	KAT6A	NA	NA	NA	NA	KAT6A	571	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	42398083	42398473	42398470	Y	NA	SLC20A2	NA	NA	NA	NA	SLC20A2	3014	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	48265920	48266584	48265994	Y	NA	NA	NA	NA	NA	NA	NDUFA5P12	191427	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	48814148	48814416	48814291	Y	NA	NA	NA	NA	NA	NA	PRKDC	56327	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	48910578	48910837	48910684	Y	NA	PRKDC,MCM4,UBE2V2	NA	NA	NA	NA	UBE2V2	8123	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	49320367	49320668	49320511	Y	NA	RPL29P19	SNAI2	IMR90	Hi-C	24141950	RPL29P19	25217	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	49426952	49427328	49427172	Y	SNAI2	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	131802	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	49430601	49430974	49430806	Y	NA	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	135451	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	54798731	54798762	54798749	Y	NA	ATP6V1H,RGS20	NA	NA	NA	NA	RGS20	36363	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	54884977	54885679	54885327	Y	NA	TCEA1	NA	NA	NA	NA	TCEA1	47410	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	56756553	56757241	56756740	Y	LYN	LYN	NA	NA	NA	NA	LYN	33131	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	59499727	59499886	59499762	Y	UBXN2B,NSMAF,NSMAF,SDCBP	SDCBP	NA	NA	NA	NA	SDCBP	36244	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	59710658	59710976	59710817	Y	NA	RNU4-50P	NA	NA	NA	NA	RNU4-50P	14135	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	59995784	59996163	59995974	Y	NA	NA	NA	NA	NA	NA	RNU4-50P	270673	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	63776641	63776831	63776733	Y	NA	NA	NA	NA	NA	NA	GGH	172899	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	67424340	67424761	67424541	Y	C8orf45	NA	NA	NA	NA	NA	ADHFE1	83920	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	67425057	67425564	67425100	Y	NA	NA	NA	NA	NA	NA	ADHFE1	84637	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr8	67433991	67434613	67434592	Y	NA	NA	NA	NA	NA	NA	MYBL1	89869	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	68499569	68499804	68499684	Y	NA	NA	NA	NA	NA	NA	CPA6	156816	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	71503238	71503393	71503365	Y	NA	TRAM1,RP11-382J12.1	NA	NA	NA	NA	TRAM1	15229	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	73559096	73559368	73559359	Y	KCNB2	NA	NA	NA	NA	NA	TERF1	359731	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	74282734	74282969	74282907	Y	NA	NA	STAU2,LOC100128126,RDH10	IMR90	Hi-C	24141950	RPL7	76710	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	79674578	79674862	79674701	Y	NA	IL7	NA	NA	NA	NA	IL7	40896	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	81962809	81963138	81963038	Y	PAG1	NA	NA	NA	NA	NA	PAG1	59165	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	86542715	86542978	86542892	Y	NA	NA	NA	NA	NA	NA	CA2	168634	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	90912887	90913271	90913166	Y	NA	OSGIN2	NA	NA	NA	NA	OSGIN2	800	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	94850124	94850307	94850200	Y	PDP1,PDP1,PDP1,PDP1,GEM	PDP1	NA	NA	NA	NA	PDP1	17728	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	94892570	94892797	94892694	Y	NA	PDP1	TMEM67,PDP1,MIR378D2	IMR90	Hi-C	24141950	PDP1	24535	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	96146998	96147210	96147103	Y	TP53INP1,PLEKHF2	PLEKHF2	NA	NA	NA	NA	PLEKHF2	2966	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	97177762	97178066	97177912	Y	GDF6	NA	NA	NA	NA	NA	UQCRB	67796	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	97319675	97319761	97319753	Y	NA	MTERFD1,PTDSS1	NA	NA	NA	NA	PTDSS1	47732	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	101773934	101774280	101774106	Y	NA	PABPC1	SNX31,PABPC1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PABPC1	40897	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	101801288	101801504	101801352	Y	NA	NA	PABPC1,SNX31	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PABPC1	68251	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr8	102171133	102171473	102171263	Y	PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706	ZNF706	ZNF706,YWHAZ,FLJ42969	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF706	44948	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	102423654	102423774	102423714	Y	NA	NA	GRHL2	MCF7	ChIA-PET	22265404	NACAP1	51632	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	103669922	103670289	103670129	Y	ATP6V1C1,KLF10,KLF10	KLF10	NA	NA	NA	NA	KLF10	3792	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	103757592	103757997	103757773	Y	NA	NA	KLF10,UBR5	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF10	91462	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	103801151	103801773	103801337	Y	NA	NA	KLF10,UBR5,ODF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1507C5.2	72755	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	103803215	103803631	103803453	Y	AZIN1,ATP6V1C1,KLF10,KLF10	NA	KLF10,UBR5,ODF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1507C5.2	70897	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	103822630	103823284	103823186	Y	NA	NA	NA	NA	NA	NA	KB-1507C5.2	51244	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	106779848	106780177	106780013	Y	NA	NA	NA	NA	NA	NA	RP11-152P17.2	290575	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	107870700	107870850	107870776	Y	NA	NA	ANGPT1	IMR90	Hi-C	24141950	TAGLN2P1	162459	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	116660380	116660747	116660648	Y	TRPS1	NA	NA	NA	NA	NA	TRPS1	159152	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	118801002	118801354	118801210	Y	NA	NA	NA	NA	NA	NA	MED30	270050	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	119023512	119024035	119023740	Y	EXT1	NA	NA	NA	NA	NA	EXT1	98057	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	119345117	119345386	119345219	Y	NA	NA	NA	NA	NA	NA	EXT1	223025	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	119452841	119453220	119453102	Y	NA	NA	NA	NA	NA	NA	SAMD12	179014	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	119485123	119485454	119485409	Y	NA	NA	NA	NA	NA	NA	SAMD12	146780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	119536200	119536581	119536442	Y	NA	NA	NA	NA	NA	NA	SAMD12	95653	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	119761036	119761418	119761238	Y	TNFRSF11B	RPS26P35	COLEC10	IMR90	Hi-C	24141950	RPS26P35	11022	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	119808728	119809168	119808881	Y	TNFRSF11B	RPS26P35	TNFRSF11B	IMR90	Hi-C	24141950	RPS26P35	36288	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	124248679	124249062	124248866	Y	NA	C8orf76,ZHX1	NA	NA	NA	NA	C8orf76	2576	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	128306934	128307283	128307196	Y	MYC	NA	LOC727677	IMR90	Hi-C	24141950	MYC	438397	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	128871975	128872421	128872033	Y	NA	NA	NA	NA	NA	NA	PVT1	67196	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	128919831	128920544	128920233	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	100313	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	128930937	128931257	128931067	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	89600	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	128944008	128944415	128944139	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	76442	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr8	128961875	128962320	128962073	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	58537	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	129076309	129076777	129076518	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	55452	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	129121216	129121486	129121350	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	100359	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	129188825	129189407	129189075	Y	NA	NA	MYC,PVT1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	167968	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	129336748	129337038	129336807	Y	NA	NA	PVT1,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	315891	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr8	129339245	129339624	129339435	Y	NA	NA	PVT1,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	318388	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	129351022	129351309	129351127	Y	NA	NA	MYC,PVT1	IMR90	Hi-C	24141950	RNU4-25P	330165	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	129373096	129373322	129373148	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	352239	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	130704918	130705264	130705078	Y	NA	NA	PVT1,MYC	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FAM49B	322111	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	130720341	130720558	130720412	Y	NA	NA	PVT1	IMR90	Hi-C	24141950	FAM49B	306817	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr8	130947350	130947645	130947497	Y	NA	NA	NA	NA	NA	NA	FAM49B	79730	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	131012344	131012436	131012358	Y	NA	FAM49B	NA	NA	NA	NA	FAM49B	14939	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	131259857	131260132	131260043	Y	NA	NA	NA	NA	NA	NA	ASAP1	193774	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	131269679	131269819	131269766	Y	NA	NA	NA	NA	NA	NA	ASAP1	184087	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	131276645	131276741	131276715	Y	NA	NA	NA	NA	NA	NA	ASAP1	177165	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	131354482	131354860	131354810	Y	NA	NA	NA	NA	NA	NA	ASAP1	99046	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	131454495	131454885	131454765	Y	NA	ASAP1	NA	NA	NA	NA	ASAP1	589	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	131456841	131457348	131457080	Y	NA	ASAP1	NA	NA	NA	NA	ASAP1	2935	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	131495645	131495684	131495664	Y	NA	ASAP1	ASAP1	IMR90	Hi-C	24141950	ASAP1	41739	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	133490941	133491318	133491130	Y	NA	NA	NA	NA	NA	NA	LRRC6	194520	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	135628946	135629314	135629008	Y	NA	NA	NA	NA	NA	NA	ZFAT	93978	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	135843585	135843751	135843688	Y	ZFAT	NA	ZFAT,MIR30D,MIR30B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZFAT	120293	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	139799567	139799714	139799659	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	1666964	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	141598802	141599709	141599120	Y	TRAPPC9,CHRAC1,EIF2C2	NA	NA	NA	NA	NA	CHRAC1	79405	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr8	141606825	141607480	141607253	Y	TRAPPC9,CHRAC1,EIF2C2	NA	NA	NA	NA	NA	CHRAC1	87428	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr8	141607900	141608150	141608005	Y	NA	NA	NA	NA	NA	NA	CHRAC1	88503	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	142163740	142163864	142163753	Y	NA	DENND3	NA	NA	NA	NA	DENND3	38363	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	142215999	142216277	142216212	Y	DENND3,SLC45A4	NA	NA	NA	NA	NA	DENND3	90622	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr8	142986268	142986706	142986510	Y	NA	NA	TSNARE1	IMR90	Hi-C	24141950	TSNARE1	495895	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	143700258	143700371	143700290	Y	NA	ARC	NA	NA	NA	NA	ARC	5425	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	143897219	143897551	143897306	Y	LY6E,GLI4	LYNX1	LY6D,LYNX1,PSCA,JRK,C8orf55,LOC100288181,SLURP1,LY6E,LOC100133669	MCF7	ChIA-PET	22265404	LYNX1	39579	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	145015768	145015971	145015849	Y	FAM83H,EPPK1,PLEC,PLEC,PLEC	PLEC,GRINA	NA	NA	NA	NA	PLEC	32931	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr8	145088816	145089042	145088955	Y	PLEC,GRINA,SPATC1	PLEC,GRINA,PARP10,OPLAH,EXOSC4,CTD-3065J16.9,GPAA1	NA	NA	NA	NA	PARP10	3876	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr8	146125688	146125902	146125777	Y	ZNF250	COMMD5,ZNF250,ZNF16	NA	NA	NA	NA	ZNF250	135	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	2241944	2242239	2242031	Y	NA	NA	NA	NA	NA	NA	SMARCA2	228602	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	3450123	3450354	3450276	Y	NA	NA	NA	NA	NA	NA	RFX3	73650	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	5901129	5901190	5901160	Y	NA	NA	NA	NA	NA	NA	ERMP1	70012	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	6680895	6681975	6681336	Y	UHRF2,KDM4C	RP11-106A1.2,RP11-390F4.6	KDM4C,UHRF2,GLDC	K562,MCF7	ChIA-PET	22265404	RP11-390F4.6	36939	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	6788210	6788382	6788241	Y	NA	NA	NA	NA	NA	NA	RP11-390F4.6	144254	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	12784417	12784967	12784682	Y	C9orf150	RP11-3L8.3	NA	NA	NA	NA	RP11-3L8.3	27377	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	14301558	14301649	14301604	Y	NA	RP11-120J1.1	NA	NA	NA	NA	RP11-120J1.1	13435	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	18718417	18718817	18718751	Y	NA	NA	NA	NA	NA	NA	ADAMTSL1	246525	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	21696721	21697113	21696912	Y	IFNA8	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	103429	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	26260192	26260607	26260418	Y	NA	NA	NA	NA	NA	NA	TUSC1	583336	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	27155069	27155179	27155099	Y	TEK	NA	NA	NA	NA	NA	PLAA	209608	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	27564116	27564302	27564198	Y	C9orf72,C9orf72	MOB3B	NA	NA	NA	NA	MOB3B	36337	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	32461734	32461764	32461747	Y	DDX58	NA	NA	NA	NA	NA	DDX58	62558	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	33942829	33943199	33943013	Y	NA	NA	NA	NA	NA	NA	UBAP2	103748	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	34681857	34682174	34682025	Y	ARID3C,IL11RA,IL11RA	SIGMAR1,GALT,IL11RA,RP11-195F19.9,RP11-195F19.5	NA	NA	NA	NA	RP11-195F19.5	17748	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	35114116	35114547	35114222	Y	DNAJB5,KIAA1539	VCP,FANCG,PIGO,STOML2,UNC13B	NA	NA	NA	NA	FAM214B	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	35518041	35518590	35518314	Y	CREB3,VCP,STOML2,RUSC2	NA	NA	NA	NA	NA	TESK1	84777	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	36232002	36232125	36232063	Y	GNE	CLTA,RNU4-53P,GNE	NA	NA	NA	NA	RNU4-53P	33655	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	36924974	36925090	36925030	Y	MELK	NA	NA	NA	NA	NA	ZCCHC7	193446	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	37197241	37197478	37197431	Y	NA	NA	NA	NA	NA	NA	ZCCHC7	78705	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	38066980	38067628	38067261	Y	SHB	RP11-613M10.9	NA	NA	NA	NA	SHB	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	38385905	38386302	38386104	Y	ALDH1B1	ALDH1B1	NA	NA	NA	NA	ALDH1B1	4359	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	38437570	38437747	38437611	Y	NA	ALDH1B1	TOMM5,IGFBPL1,ALDH1B1	IMR90	Hi-C	24141950	ALDH1B1	46909	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	66843628	66843847	66843730	Y	NA	NA	LOC642236	IMR90	Hi-C	24141950	RP11-764K9.4	1609528	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	68455261	68455556	68455421	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	1886	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr9	72871058	72871439	72871223	Y	NA	SMC5	NA	NA	NA	NA	SMC5	498	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	73033763	73035382	73035076	Y	SMC5,KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	6223	CAGE	RERF-LC-AI	hg19	FANTOM5	2.42576068827171
chr9	73198481	73198826	73198654	Y	NA	NA	NA	NA	NA	NA	KLF9	170941	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	73402441	73402694	73402566	Y	NA	NA	NA	NA	NA	NA	KLF9	374901	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	73569162	73569421	73569277	Y	NA	NA	NA	NA	NA	NA	KLF9	541622	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	81390215	81390602	81390491	Y	NA	NA	NA	NA	NA	NA	PSAT1	480156	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	81486579	81486867	81486725	Y	NA	NA	TLE4	IMR90	Hi-C	24141950	PSAT1	576520	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	81627556	81627780	81627606	Y	NA	NA	NA	NA	NA	NA	TLE4	556908	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	85081862	85082035	85081990	Y	NA	NA	NA	NA	NA	NA	TLE1	779642	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	89990510	89990850	89990781	Y	NA	NA	DAPK1	IMR90	Hi-C	24141950	RP11-40C6.2	147367	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	90328172	90328868	90328486	Y	DAPK1,CTSL1	NA	CTSL1	IMR90	Hi-C	24141950	RP11-40C6.2	189955	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	91140669	91140820	91140815	Y	NA	NXNL2	SPIN1,SHC3,SECISBP2,CKS2,CDK20,NXNL2,S1PR3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NXNL2	7196	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	91795136	91795669	91795494	Y	C9orf47,SHC3	NA	NA	NA	NA	NA	CKS2	128444	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr9	92296049	92296284	92296165	Y	NA	NA	NA	NA	NA	NA	GADD45G	78121	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	93880356	93880696	93880620	Y	NA	NA	LOC100129316,AUH,ROR2	IMR90	Hi-C	24141950	AUH	241499	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	93893646	93894080	93893930	Y	NA	NA	LOC100129316,AUH	IMR90	Hi-C	24141950	AUH	228115	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	93955991	93956732	93956142	Y	NA	NA	NA	NA	NA	NA	AUH	165463	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	94668024	94668724	94668369	Y	ROR2	ROR2	NA	NA	NA	NA	ROR2	41720	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	94872861	94873095	94872978	Y	NA	SPTLC1	NA	NA	NA	NA	SPTLC1	2571	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	95826654	95827012	95826884	Y	FGD3,FAM120AOS,SUSD3	SUSD3,C9orf89	NA	NA	NA	NA	SUSD3	7665	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	96928143	96928630	96928259	Y	NA	NA	NA	NA	NA	NA	ZNF169	90963	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr9	96928795	96929410	96929111	Y	NA	NA	NA	NA	NA	NA	ZNF169	90183	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	97684288	97685133	97684708	Y	NA	NA	FANCC	IMR90	Hi-C	24141950	C9orf3	197305	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	98629500	98629569	98629535	Y	NA	LINC00476	NA	NA	NA	NA	LINC00476	6690	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	98846089	98846388	98846374	Y	NA	NA	LOC158434	IMR90	Hi-C	24141950	EIF4BP3	59901	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	99181547	99181719	99181643	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	ZNF367	2936	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	99213129	99213681	99213680	Y	ZNF510,CDC14B,HABP4	RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	HABP4	2646	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	100747732	100748046	100747912	Y	NA	ANP32B	NA	NA	NA	NA	ANP32B	4089	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	104248590	104248780	104248669	Y	C9orf125	RNF20	NA	NA	NA	NA	RNF20	45353	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	108005367	108005618	108005429	Y	NA	SLC44A1	NA	NA	NA	NA	SLC44A1	464	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	109627297	109627657	109627483	Y	NA	ZNF462	NA	NA	NA	NA	ZNF462	3919	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	110512153	110512586	110512216	Y	KLF4	NA	KLF4	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-438P9.1	217482	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	110514044	110514454	110514287	Y	KLF4	NA	KLF4	MCF7	ChIA-PET	22265404	RP11-438P9.1	219373	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	111482488	111482546	111482517	Y	NA	NA	NA	NA	NA	NA	RP11-220D10.1	95375	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	111774521	111775173	111774726	Y	NA	CTNNAL1	NA	NA	NA	NA	CTNNAL1	712	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr9	113026614	113026796	113026705	Y	NA	TXN	TXNDC8,SVEP1	IMR90	Hi-C	24141950	TXN	9694	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	114707434	114708001	114707643	Y	NA	NA	NA	NA	NA	NA	UGCG	50388	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	114720285	114720825	114720474	Y	UGCG	NA	C9orf84,UGCG,MIR3134,SUSD1,HSDL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UGCG	63239	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	114783014	114783329	114783192	Y	NA	NA	NA	NA	NA	NA	UGCG	125968	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	114828005	114828556	114828288	Y	UGCG	NA	NA	NA	NA	NA	SUSD1	107132	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	116281787	116282895	116282664	Y	NA	NA	NA	NA	NA	NA	RGS3	76776	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	116385277	116385518	116385372	Y	RGS3	NA	NA	NA	NA	NA	RGS3	180266	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	117690349	117690800	117690390	Y	DFNB31,ATP6V1G1,TNFSF15,TNFSF15,TNFSF8	NA	NA	NA	NA	NA	TNFSF15	123943	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	118378080	118378500	118378342	Y	NA	NA	PAPPA,LINC00474	IMR90	Hi-C	24141950	TNC	499544	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	118919313	118920155	118919798	Y	PAPPA	NA	NA	NA	NA	NA	TRIM32	527426	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	120507373	120507587	120507563	Y	NA	NA	NA	NA	NA	NA	TRIM32	1059792	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	124161523	124161647	124161545	Y	NA	STOM	GSN,RAB14,GGTA1P,CNTRL,STOM	IMR90	Hi-C	24141950	STOM	30992	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	124320020	124320242	124320131	Y	NA	DAB2IP	DAB2IP,TTLL11	IMR90	Hi-C	24141950	DAB2IP	7094	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	124361597	124361984	124361689	Y	NA	DAB2IP	NA	NA	NA	NA	DAB2IP	34261	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr9	124383753	124383935	124383823	Y	DAB2IP	NA	NA	NA	NA	NA	DAB2IP	56417	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	124498744	124498978	124498839	Y	GSN	NA	NA	NA	NA	NA	DAB2IP	171408	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	124527423	124527640	124527529	Y	NA	NA	NA	NA	NA	NA	DAB2IP	200087	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	124739149	124739438	124739243	Y	NA	NA	NA	NA	NA	NA	TTLL11	114447	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	125168700	125168938	125168792	Y	NA	NA	NA	NA	NA	NA	RBM18	143582	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	126468286	126468378	126468332	Y	STRBP,STRBP	NA	NA	NA	NA	NA	DENND1A	222053	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	126780358	126780798	126780587	Y	NA	LHX2	NA	NA	NA	NA	LHX2	18409	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	127110676	127110867	127110772	Y	NA	NA	NA	NA	NA	NA	PSMB7	64856	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	127980597	127980978	127980790	Y	NA	PPP6C,RABEPK,HSPA5,RP11-65N13.8,GAPVD1	NA	NA	NA	NA	RABEPK	19776	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	128211957	128212104	128212028	Y	NA	NA	NA	NA	NA	NA	GAPVD1	189884	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	128408655	128409172	128408692	Y	NA	NA	NA	NA	NA	NA	MAPKAP1	58341	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	129484571	129485188	129484881	Y	NA	NA	NA	NA	NA	NA	ZBTB43	80097	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	129929259	129929425	129929350	Y	LRSAM1,RALGPS1	NA	NA	NA	NA	NA	GARNL3	55119	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	130329548	130329691	130329605	Y	PTRH1,FPGS,FPGS,ENG,CDK9,FAM129B,FAM129B	FAM129B,STXBP1	NA	NA	NA	NA	FAM129B	9577	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	130341922	130342377	130342071	Y	NA	FAM129B,STXBP1	NA	NA	NA	NA	FAM129B	2654	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	131673839	131674187	131673982	Y	PPP2R4,PPP2R4,PPP2R4,LRRC8A,LRRC8A	LRRC8A,CCBL1,PHYHD1,DOLK,NUP188	NA	NA	NA	NA	PHYHD1	6987	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	131929021	131929365	131929193	Y	NA	IER5L	NA	NA	NA	NA	IER5L	9175	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	132040752	132040968	132040856	Y	NA	C9orf106	C9orf106,IER5L,LOC100506190,PPP2R4,CRAT,C9orf50,METTL11A	IMR90,MCF7,HELA,K562	Hi-C,ChIA-PET,5C	24141950,22265404,22955621	C9orf106	40327	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	132145857	132146151	132146146	Y	FAM73B,C9orf106,USP20,USP20,TOR1B,C9orf78,ASB6	NA	C9orf106,LOC100506190,IER5L,C9orf50,PPP2R4,CRAT	IMR90,MCF7,K562,HELA	Hi-C,ChIA-PET,5C	24141950,22265404,22955621	RP11-65J3.1	53278	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	132257886	132258547	132258348	Y	NA	LINC00963	NA	NA	NA	NA	LINC00963	14156	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chr9	132369856	132370376	132370136	Y	CRAT,IER5L,C9orf106,PRRX2,GPR107	ASB6	NA	NA	NA	NA	ASB6	32068	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	132372165	132372686	132372524	Y	NA	ASB6	NA	NA	NA	NA	ASB6	29758	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	132568357	132568650	132568524	Y	TOR1B	TOR1B,TOR1A,USP20,C9orf78	NA	NA	NA	NA	TOR1B	4925	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	132814142	132814504	132814316	Y	TOR1B	FNBP1,GPR107	NCS1	IMR90	Hi-C	24141950	GPR107	437	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	133565449	133565699	133565571	Y	NA	RP11-57C19.2,EXOSC2,ABL1	NA	NA	NA	NA	EXOSC2	1409	CAGE	RERF-LC-AI	hg19	FANTOM5	2.02146724022642
chr9	133733743	133734142	133733821	Y	NA	NA	NA	NA	NA	NA	ABL1	146410	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	133736245	133736518	133736410	Y	ABL1	NA	NA	NA	NA	NA	LAMC3	145951	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	134131602	134132161	134131829	Y	RAPGEF1,PRRC2B,QRFP,NUP214,FAM78A	NA	NA	NA	NA	NA	NUP214	132654	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	134248752	134249121	134248943	Y	AIF1L,POMT1,PRRC2B	PRRC2B	PRRC2B,NUP214,FAM78A	IMR90	Hi-C	24141950	PRRC2B	18359	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr9	134510539	134511032	134510903	Y	RAPGEF1,RAPGEF1	NA	NA	NA	NA	NA	RAPGEF1	102429	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	135016724	135016887	135016786	Y	NA	NTNG2	MED27,RAPGEF1,NTNG2,SETX	IMR90	Hi-C	24141950	NTNG2	18447	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	136292897	136293168	136293034	Y	SLC2A6,RALGDS	REXO4,SLC2A6	NA	NA	NA	NA	REXO4	11733	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	136576519	136576779	136576603	Y	SURF4	NA	NA	NA	NA	NA	SLC2A6	234260	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	136856624	136856782	136856656	Y	VAV2	VAV2,LINC00094	NA	NA	NA	NA	VAV2	898	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	137257724	137257990	137257923	Y	RXRA	NA	NA	NA	NA	NA	RXRA	50780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	137536549	137536868	137536739	Y	COL5A1	COL5A1	NA	NA	NA	NA	COL5A1	4929	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	137739401	137739789	137739783	Y	NA	NA	NA	NA	NA	NA	COL5A1	207781	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	138233554	138233668	138233594	Y	NA	NA	OLFM1	IMR90	Hi-C	24141950	PPP1R26	135257	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr9	138348639	138348707	138348673	Y	NA	PPP1R26,MRPS2,C9orf116	NA	NA	NA	NA	PPP1R26	20218	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	138666183	138666357	138666270	Y	NA	NA	NA	NA	NA	NA	CAMSAP1	130717	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	138986008	138986159	138986118	Y	NACC2	NACC2,C9orf69	NA	NA	NA	NA	NACC2	877	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	139120043	139120348	139120196	Y	NOTCH1	QSOX2	NA	NA	NA	NA	QSOX2	15339	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	139428258	139428617	139428423	Y	NACC2,CARD9,SEC16A,NOTCH1	NOTCH1	NA	NA	NA	NA	NOTCH1	9697	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	140023869	140024391	140024239	Y	NA	MAN1B1,DPP7,MIR3621	GRIN1	K562	ChIA-PET	22265404	DPP7	16240	CAGE	RERF-LC-AI	hg19	FANTOM5	9.70304275308682
chr9	140101916	140102100	140102008	Y	C9orf172,FUT7	MIR3621,ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	NDOR1	3769	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	140117588	140118357	140118103	Y	C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1	ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,TUBB4B	NA	NA	NA	NA	TUBB4B	15308	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chr9	140189199	140189592	140189229	Y	NA	NRARP	NA	NA	NA	NA	NRARP	5111	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chr9	140200054	140200221	140200146	Y	EXD3,NRARP	NRARP	NA	NA	NA	NA	NRARP	5351	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chr9	140303397	140303743	140303573	Y	NA	EXD3,NOXA1	NA	NA	NA	NA	EXD3	11971	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chr9	140565381	140565755	140565635	Y	NRARP	NA	NA	NA	NA	NA	EHMT1	53937	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	3732842	3733263	3733002	Y	PRKX	NA	NA	NA	NA	NA	PRKX	103193	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chrX	9433838	9434425	9434365	Y	TBL1X	TBL1X	NA	NA	NA	NA	TBL1X	4503	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	12228582	12228906	12228588	Y	NA	NA	NA	NA	NA	NA	MSL3	454304	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	12390298	12390694	12390463	Y	NA	NA	NA	NA	NA	NA	PRPS2	416780	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	13416625	13416882	13416754	Y	NA	GPX1P1	FAM9C,TMSB4X,LOC100133123	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GPX1P1	21166	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	17395556	17395647	17395622	Y	NHS	NHS	NA	NA	NA	NA	NHS	4013	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	18904688	18905149	18904995	Y	PHKA2	NA	NA	NA	NA	NA	PHKA2	95567	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	19407416	19407434	19407425	Y	NA	PDHA1	NA	NA	NA	NA	PDHA1	47405	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	39614973	39615267	39615108	Y	NA	GAPDHP1	NA	NA	NA	NA	GAPDHP1	30123	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	39646201	39646652	39646229	Y	NA	GAPDHP1	NA	NA	NA	NA	GAPDHP1	811	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	39767458	39767957	39767519	Y	NA	NA	BCOR	IMR90	Hi-C	24141950	GAPDHP1	122068	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	39949495	39949781	39949700	Y	NA	NA	NA	NA	NA	NA	BCOR	84801	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	39951266	39951579	39951437	Y	NA	NA	NA	NA	NA	NA	BCOR	83003	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	39965558	39965902	39965820	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	68680	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	39968308	39968728	39968376	Y	BCOR	NA	NA	NA	NA	NA	BCOR	65854	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	40030956	40031200	40030978	Y	BCOR,CXorf38,ATP6AP2	BCOR	NA	NA	NA	NA	BCOR	3382	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	40034694	40035505	40035056	Y	BCOR,CXorf38,ATP6AP2,BCOR	BCOR	NA	NA	NA	NA	BCOR	112	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	40792948	40793319	40793225	Y	ATP6AP2	RP11-77G22.2	USP9X,MED14	IMR90	Hi-C	24141950	RP11-77G22.2	27711	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	41182589	41182765	41182693	Y	NA	DDX3X	DDX3X	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DDX3X	7886	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	41594711	41594837	41594774	Y	NA	NA	NA	NA	NA	NA	CASK	185879	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45305345	45305614	45305509	Y	NA	NA	NA	NA	NA	NA	MIR221	298080	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45338516	45338773	45338583	Y	NA	NA	MIR221,MIR222	IMR90	Hi-C	24141950	MIR221	264921	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45366261	45366615	45366438	Y	NA	NA	MIR221,MIR222	IMR90	Hi-C	24141950	MIR221	237079	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45376807	45376988	45376867	Y	NA	NA	MIR221,MIR222	IMR90	Hi-C	24141950	MIR221	226706	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45647781	45648040	45647909	Y	NA	MIR221,MIR222	NA	NA	NA	NA	MIR222	43251	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45666059	45666529	45666404	Y	NA	RP5-1158E12.3	NA	NA	NA	NA	RP5-1158E12.3	42391	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	45667637	45667718	45667664	Y	NA	RP5-1158E12.3	NA	NA	NA	NA	RP5-1158E12.3	41202	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	46316161	46316444	46316394	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18012	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	46338861	46339028	46338937	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	40712	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	47492098	47492440	47492261	Y	ARAF,CFP,CFP	SYN1,ELK1,UXT	NA	NA	NA	NA	SYN1	14846	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	48345811	48346195	48345963	Y	WAS,RBM3,PQBP1,PQBP1,PQBP1,OTUD5	FTSJ1,PORCN,EBP,TBC1D25	NA	NA	NA	NA	FTSJ1	13270	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	48571837	48572283	48571996	Y	TBC1D25,PQBP1,PIM2,OTUD5,GRIPAP1	SUV39H1	NA	NA	NA	NA	SUV39H1	19892	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	49139256	49139619	49139438	Y	FOXP3,PPP1R3F	CCDC22,PPP1R3F	NA	NA	NA	NA	PPP1R3F	14950	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	52964244	52964539	52964367	Y	TSPYL2,KDM5C,IQSEC2,FAM156A	FAM156B	NA	NA	NA	NA	FAM156B	45908	CAGE	RERF-LC-AI	hg19	FANTOM5	1.61717379218114
chrX	53172968	53173150	53172985	Y	NA	NA	NA	NA	NA	NA	LINC01155	51641	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	53467183	53467489	53467297	Y	FAM156A,TSPYL2,IQSEC2	SMC1A,HSD17B10	NA	NA	NA	NA	HSD17B10	7863	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	53468564	53468782	53468716	Y	IQSEC2	SMC1A,HSD17B10	NA	NA	NA	NA	HSD17B10	9244	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	54207583	54207867	54207725	Y	NA	NA	NA	NA	NA	NA	FAM120C	0	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	68004355	68004677	68004478	Y	NA	SERBP1P1,EFNB1	NA	NA	NA	NA	SERBP1P1	3040	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	69654278	69654566	69654417	Y	DLG3	DLG3	NA	NA	NA	NA	DLG3	8145	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	73352212	73352497	73352336	Y	NA	USMG5P1	JPX	IMR90	Hi-C	24141950	USMG5P1	39228	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	73755621	73755953	73755678	Y	RLIM	NA	NA	NA	NA	NA	RLIM	76499	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	73756210	73756567	73756298	Y	NA	NA	NA	NA	NA	NA	RLIM	75885	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	77306835	77307068	77306952	Y	NA	PGK1	NA	NA	NA	NA	PGK1	11617	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	102820880	102821034	102820957	Y	NA	TCEAL4,TCEAL3	NA	NA	NA	NA	TCEAL4	8125	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	106920003	106920801	106920325	Y	TSC22D3,TSC22D3	NA	TSC22D3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PRPS1	50266	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	108883543	108883897	108883721	Y	NA	NA	NA	NA	NA	NA	ACSL4	90735	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	125606277	125607115	125606755	Y	NA	MTND4LP1,MTND4P24	NA	NA	NA	NA	MTND4P24	1409	CAGE	RERF-LC-AI	hg19	FANTOM5	2.83005413631699
chrX	129066097	129066492	129066260	Y	NA	UTP14A,BCORL1	NA	NA	NA	NA	UTP14A	28000	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	129118011	129118370	129118054	Y	NA	BCORL1	BCORL1,UTP14A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCORL1	4928	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	129245756	129246153	129246006	Y	NA	ELF4	NA	NA	NA	NA	ELF4	3065	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	129400519	129400680	129400638	Y	NA	ZNF280C	NA	NA	NA	NA	ZNF280C	193	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	131220821	131221272	131220959	Y	MST4,MST4,RAP2C	RP1-305B16.3	NA	NA	NA	NA	RP1-305B16.3	42108	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	133756354	133756493	133756422	Y	NA	NA	MIR450A2,MGC16121,MIR450A1,LOC100506757,MIR450B,MIR542	IMR90	Hi-C	24141950	HPRT1	164171	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	139847313	139847514	139847421	Y	NA	NA	NA	NA	NA	NA	LDOC1	421796	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrX	139855409	139855570	139855490	Y	NA	NA	NA	NA	NA	NA	LDOC1	413740	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	139858514	139858763	139858620	Y	NA	NA	NA	NA	NA	NA	LDOC1	410547	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	149533685	149533896	149533780	Y	MAMLD1	MAMLD1	NA	NA	NA	NA	MAMLD1	5996	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	149862815	149863170	149863006	Y	MTMR1	MTMR1	NA	NA	NA	NA	MTMR1	3380	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	149863384	149863571	149863479	Y	NA	MTMR1	NA	NA	NA	NA	MTMR1	3949	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	150152595	150153067	150152778	Y	NA	HMGB3,RPL19P21	NA	NA	NA	NA	HMGB3	5613	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chrX	152893404	152893516	152893460	Y	ATP2B3,DUSP9	FAM58A,DUSP9,RPL18AP16	FAM58A	MCF7	ChIA-PET	22265404	DUSP9	12430	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	153166203	153166850	153166548	Y	ABCD1,PLXNB3,MECP2,ATP6AP1,RENBP	L1CAM,ARHGAP4,NAA10	NA	NA	NA	NA	L1CAM	5827	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284
chrX	153829365	153829583	153829391	Y	NA	NA	NA	NA	NA	NA	G6PD	55578	CAGE	RERF-LC-AI	hg19	FANTOM5	1.21288034413585
chrX	153956289	153956510	153956418	Y	TKTL1,IKBKG,IKBKG,F8A2,F8A1,GAB3	GAB3,DKC1	NA	NA	NA	NA	GAB3	21348	CAGE	RERF-LC-AI	hg19	FANTOM5	0.808586896090569
chrY	13476723	13477122	13476988	Y	NA	NA	NA	NA	NA	NA	AGKP1	3271854	CAGE	RERF-LC-AI	hg19	FANTOM5	0.404293448045284