chr1 945769 946034 945890 Y CCNL2,ATAD3B PLEKHN1,ISG15,AGRN NA NA NA NA ISG15 769 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 1004646 1004986 1004766 Y NA C1orf159 NA NA NA NA C1orf159 44755 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 1098630 1098901 1098641 Y NA C1orf159 NA NA NA NA C1orf159 48889 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 1814762 1815124 1815035 Y SKI,C1orf86,MIB2 GNB1 NA NA NA NA GNB1 5371 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 4729528 4729775 4729656 Y AJAP1 NA NA NA NA NA C1orf174 914671 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 7289758 7290075 7289881 Y NA NA NA NA NA NA CAMTA1 446374 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 7313313 7313451 7313382 Y NA NA NA NA NA NA CAMTA1 469929 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 7327634 7328033 7327873 Y NA NA NA NA NA NA CAMTA1 484250 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 7764543 7764931 7764717 Y PER3 NA NA NA NA NA VAMP3 64398 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 8154517 8154933 8154754 Y VAMP3 NA ERRFI1,RERE,PARK7,SLC45A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ERRFI1 70149 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 8933581 8933925 8933847 Y NA ENO1-IT1,ENO1 NA NA NA NA ENO1-IT1 2141 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 9488839 9489227 9489154 Y NA NA SPSB1,SLC25A33,H6PD,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 108314 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr1 10269964 10270260 10269995 Y RBP7,PGD,KIF1B KIF1B NA NA NA NA KIF1B 1101 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 10559059 10559458 10559098 Y NA PEX14,DFFA NA NA NA NA DFFA 28476 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 14880204 14880538 14880413 Y NA KAZN KAZN IMR90 Hi-C 24141950 KAZN 42662 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 14992426 14992802 14992486 Y NA NA NA NA NA NA KAZN 69226 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 15664307 15664455 15664338 Y NA NA EFHD2,CTRC,CELA2A,CELA2B IMR90 Hi-C 24141950 EFHD2 69936 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 15666999 15667145 15667070 Y NA NA CTRC,EFHD2 IMR90 Hi-C 24141950 EFHD2 67246 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 15946733 15946892 15946831 Y EFHD2,CASP9,ZBTB17,SPEN,DDI2 CHCHD2P6,DDI2 NA NA NA NA DDI2 4738 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 16677236 16677843 16677569 Y ZBTB17,FBXO42 FBXO42 RSG1 IMR90 Hi-C 24141950 FBXO42 287 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 16696032 16696399 16696223 Y NA FBXO42 NA NA NA NA FBXO42 19083 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 17231253 17231704 17231392 Y PADI4,PADI2 NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 104719 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 17240188 17240783 17240515 Y NA NA CROCC K562 ChIA-PET 22265404 ATP13A2 95640 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 17518941 17519138 17519054 Y ATP13A2,PADI3 RP11-380J14.1,PADI1 NBPF1,PADI1,PADI2,PADI3 IMR90 Hi-C 24141950 RP11-380J14.1 4663 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 17534687 17534794 17534729 Y NA RP11-380J14.1,PADI1 NA NA NA NA PADI1 5066 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 19336477 19336714 19336579 Y NA NA UBR4,IFFO2,ALDH4A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFFO2 55297 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 23123668 23124069 23123697 Y NA NA NA NA NA NA EPHB2 88336 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 23426690 23427100 23426944 Y NA NA NA NA NA NA LUZP1 75201 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 24736156 24736250 24736199 Y PNRC2,GRHL3 NIPAL3 NA NA NA NA NIPAL3 4034 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 25969249 25969578 25969407 Y PDIK1L,SYF2,C1orf63,TMEM57,LDLRAP1,MAN1C1,FAM54B NA SEPN1 IMR90 Hi-C 24141950 LDLRAP1 101178 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 27963400 27963974 27963761 Y EYA3,STX12,C1orf38,FGR,FGR,FGR AHDC1,IFI6 NA NA NA NA IFI6 32755 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 29214759 29214998 29214903 Y GMEB1,EPB41 EPB41 NA NA NA NA EPB41 3156 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 31627566 31627958 31627874 Y SDC3,HCRTR1,NKAIN1 NA SNRNP40,PUM1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PUM1 90728 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr1 31770743 31770927 31770835 Y NA SNRNP40,ZCCHC17 NA NA NA NA ZCCHC17 2901 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 32966228 32966602 32966575 Y FAM167B,MARCKSL1,KIAA1522,ZBTB8B,ZBTB8A ZBTB8A NA NA NA NA ZBTB8A 36426 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 33227148 33227387 33227320 Y NA KIAA1522 NA NA NA NA KIAA1522 21662 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 33458800 33459074 33458865 Y RNF19B RNF19B NA NA NA NA RNF19B 30514 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 35892196 35892421 35892350 Y NA NA NA NA NA NA NCDN 128653 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 36617554 36617914 36617691 Y STK40,SH3D21,CSF3R,EIF2C4,EIF2C1,EIF2C3 TRAPPC3,MAP7D1 NA NA NA NA MAP7D1 1266 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 36849527 36849580 36849557 Y EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,CSF3R STK40,LSM10 NA NA NA NA STK40 30 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 36866636 36866899 36866720 Y LSM10 STK40,LSM10,OSCP1 NA NA NA NA LSM10 5143 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 38009784 38010404 38010149 Y SNIP1,MTF1,ZC3H12A MEAF6,SNIP1,RP3-423B22.5,GNL2 MEAF6 IMR90 Hi-C 24141950 SNIP1 7499 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 41826642 41826952 41826745 Y NA FOXO6 NA NA NA NA FOXO6 1048 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 42127851 42128791 42128091 Y NA NA NA NA NA NA FOXO6 302257 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 43406108 43407009 43406836 Y YBX1,ERMAP,SZT2 SLC2A1 NA NA NA NA SLC2A1 15521 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 43988888 43989038 43988936 Y PTPRF PTPRF PTPRF IMR90 Hi-C 24141950 PTPRF 30 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 46102450 46102810 46102714 Y NA RP11-767N6.2,TMEM69,GPBP1L1 NA NA NA NA RP11-767N6.2 12688 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 46111666 46112048 46111975 Y NA RP11-767N6.2,TMEM69,GPBP1L1 NA NA NA NA RP11-767N6.2 3450 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 51083951 51084011 51083988 Y NA NA NA NA NA NA FAF1 339924 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 52885344 52885737 52885540 Y ZCCHC11 ORC1,PRPF38A NA NA NA NA PRPF38A 17108 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 53482500 53482782 53482682 Y NA NA NA NA NA NA SCP2 91599 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 54700132 54700688 54700499 Y NA CYB5RL NA NA NA NA CYB5RL 36423 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 59478866 59479252 59479013 Y NA RP4-794H19.4 FGGY,LOC100131060,JUN,HSD52,MIR4711 IMR90 Hi-C 24141950 RP4-794H19.4 4807 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 59608749 59609120 59609039 Y NA NA NA NA NA NA RP4-794H19.4 124690 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 59616706 59617089 59616861 Y NA NA HSD52,FGGY,JUN,LOC100131060,MIR4711 IMR90 Hi-C 24141950 RP4-794H19.4 132647 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 59910700 59911009 59910820 Y NA NA NA NA NA NA FGGY 150390 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 61549054 61549253 61549232 Y NA NA NA NA NA NA NFIA 220123 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 62119868 62120084 62119981 Y NA NA TM2D1,INADL IMR90 Hi-C 24141950 TM2D1 69011 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 64197270 64197475 64197385 Y NA NA ROR1,UBE2U,PGM1 IMR90 Hi-C 24141950 CFL1P3 109881 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 65292575 65293034 65292898 Y NA NA NA NA NA NA RAVER2 83797 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 65398951 65399446 65399123 Y LEPROT,LEPROT,LEPR,JAK1 JAK1 NA NA NA NA JAK1 30741 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 68257383 68257657 68257565 Y NA GNG12 NA NA NA NA GNG12 39493 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 68639460 68639856 68639657 Y NA NA NA NA NA NA WLS 56947 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 76581893 76581954 76581924 Y NA NA NA NA NA NA RABGGTB 332014 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 81344955 81344988 81344971 Y NA NA NA NA NA NA ST13P20 840390 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 84710038 84710507 84710127 Y NA NA NA NA NA NA PRKACB 168293 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 85991291 85991622 85991523 Y DDAH1,CYR61 NA NA NA NA NA DDAH1 50311 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 87689823 87690165 87689994 Y HS2ST1,LMO4 NA LOC339524,LMO4 IMR90 Hi-C 24141950 LMO4 101986 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 87800631 87801610 87800748 Y NA LMO4 NA NA NA NA LMO4 8480 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 89475726 89475778 89475752 Y NA CCBL2,RBMXL1,GBP3 NA NA NA NA GBP3 10799 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 90309838 90310280 90310072 Y LRRC8C,ZNF326 LRRC8D NA NA NA NA LRRC8D 25265 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 94145547 94146118 94145739 Y NA NA NA NA NA NA BCAR3 164588 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 94158601 94159338 94158654 Y GCLM,DNTTIP2,BCAR3 NA BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCAR3 151368 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 94168203 94168325 94168229 Y NA NA BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCAR3 142381 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 94169341 94169462 94169391 Y GCLM,DNTTIP2 NA BCAR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCAR3 141244 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 94788386 94788592 94788436 Y ARHGAP29,F3 ARHGAP29,RP11-148B18.3 ARHGAP29,ABCA4,BCAR3,GCLM IMR90 Hi-C 24141950 RP11-148B18.3 8231 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 94795618 94795987 94795955 Y NA RP11-148B18.3 ARHGAP29,ABCA4,ABCD3 IMR90 Hi-C 24141950 RP11-148B18.3 836 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 95003688 95004160 95004042 Y NA F3 NA NA NA NA F3 1196 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 95007995 95008302 95008221 Y NA F3 NA NA NA NA F3 2639 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 95179307 95179605 95179478 Y F3 NA F3,ABCD3,ALG14 IMR90 Hi-C 24141950 RP11-86H7.7 91567 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 95191212 95191391 95191280 Y F3 NA F3,ABCD3 IMR90 Hi-C 24141950 LINC01057 92446 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 95388205 95388608 95388523 Y NA CNN3,RP4-639F20.1 NA NA NA NA CNN3 2226 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 97594209 97594479 97594411 Y NA NA NA NA NA NA PTBP2 408988 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 98606055 98606462 98606113 Y NA NA NA NA NA NA RP5-1070A16.1 67841 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 98642709 98642844 98642773 Y NA RP5-1070A16.1 NA NA NA NA RP5-1070A16.1 31459 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 98789496 98789901 98789701 Y NA NA MIR137HG,MIR2682,LOC729987,DPYD IMR90 Hi-C 24141950 RP5-1070A16.1 115193 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 110334849 110335164 110334977 Y NA NA CSF1,FAM40A,GSTM4,AHCYL1,EPS8L3,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GSTM3 52465 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 110438276 110438910 110438607 Y NA CSF1 CSF1,EPS8L3,SORT1,PSMA5,GSTM3,GNAI3,GSTM4,AHCYL1 IMR90 Hi-C 24141950 CSF1 11954 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr1 110810528 110810781 110810625 Y NA NA NA NA NA NA RBM15 68347 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 111207085 111207350 111207176 Y NA NA NA NA NA NA LAMTOR5-AS1 283644 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 111981832 111982198 111982008 Y NA ATP5F1,WDR77 NA NA NA NA ATP5F1 7288 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 114950620 114950667 114950644 Y NA NA NA NA NA NA TRIM33 101114 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 116038305 116038519 116038336 Y NA NA NGF,TSPAN2 IMR90 Hi-C 24141950 VANGL1 144055 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 116087444 116087828 116087621 Y NA NA NGF IMR90 Hi-C 24141950 VANGL1 94746 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 145437595 145437817 145437681 Y CD160,TXNIP,POLR3GL,ANKRD34A TXNIP,POLR3GL,LIX1L NA NA NA NA TXNIP 1126 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 147080043 147080251 147080097 Y PRKAB2,CHD1L,BCL9 NA NA NA NA NA ACP6 60367 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 147806841 147807184 147807140 Y NA RNU1-122P NA NA NA NA RNU1-122P 1955 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 150577042 150577503 150577391 Y CDC42SE1,PLEKHO1,PRPF3,FAM63A,CTSS,MCL1 MCL1,ENSA NA NA NA NA ENSA 22585 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr1 150949569 150950014 150949933 Y ZNF687,TNFAIP8L2,SELENBP1,RFX5,POGZ,POGZ,PI4KB,PI4KB,CDC42SE1,MCL1,CTSS,ARNT,SETDB1,LASS2,PRUNE,FAM63A,FAM63A,FAM63A CERS2,FAM63A,PRUNE NA NA NA NA CERS2 4090 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 151255796 151256115 151256047 Y NA PSMD4,ZNF687,PI4KB NA NA NA NA ZNF687 3702 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 151284018 151284391 151284246 Y FAM63A,CDC42SE1,TNFAIP8L2,ZNF687,RFX5,PI4KB,PI4KB ZNF687,PI4KB,RP11-126K1.6,RFX5 NA NA NA NA PI4KB 13800 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 151580936 151581099 151580976 Y NA SNX27,RP11-404E16.1 RIIAD1,CELF3 IMR90 Hi-C 24141950 SNX27 1442 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 151918166 151918684 151918434 Y NA THEM4,S100A10 S100A10,CELF3,THEM4,RORC,S100A11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THEM4 37882 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr1 151918898 151919222 151919024 Y S100A10 THEM4,S100A10 S100A10,CELF3,THEM4,RORC,S100A11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 THEM4 38614 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 151960875 151961433 151961102 Y S100A11,S100A10 S100A10 NA NA NA NA S100A10 3433 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 152006910 152007460 152006991 Y SNX27,S100A11 S100A10,S100A11 NA NA NA NA S100A11 10923 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 152007615 152008057 152007721 Y THEM4 S100A10,S100A11 NA NA NA NA S100A11 10326 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 153583449 153583810 153583692 Y PGLYRP3,PGLYRP4,S100A7A,S100A7L2,S100A6,S100A2,S100A16,S100A14,S100A13,S100A13 S100A2,S100A1,CHTOP,S100A13,SNAPIN NA NA NA NA S100A16 0 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 153584539 153584862 153584750 Y NA S100A2,S100A16,S100A1,CHTOP,S100A13,SNAPIN NA NA NA NA S100A16 918 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 153936554 153936861 153936642 Y UBAP2L,HAX1,S100A16,SNAPIN,ILF2,JTB,CREB3L4 GATAD2B,CRTC2,CREB3L4,SLC39A1,JTB,RAB13,RPS27,RP11-422P24.9 NA NA NA NA CREB3L4 1149 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 155164183 155164959 155164537 Y NA KRTCAP2,MIR92B,MTX1,GBAP1,GBA NA NA NA NA MIR92B 1215 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 156066868 156067143 156067009 Y MEF2D,MSTO1,YY1AP1,YY1AP1,YY1AP1,GON4L LAMTOR2,MEX3A,LMNA LMNA,MEX3A K562,MCF7 ChIA-PET 22265404 LMNA 16504 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 156074715 156075305 156075042 Y YY1AP1,YY1AP1,YY1AP1,YY1AP1,LMNA MEX3A,LMNA LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3,MEX3A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNA 24351 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 156472693 156472952 156472780 Y LMNA,C1orf182,RRNAD1,MEF2D MEF2D NA NA NA NA MEF2D 4073 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 156474686 156475018 156474923 Y SLC25A44,PMF1,RRNAD1,MEF2D MEF2D NA NA NA NA MEF2D 6066 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 157989414 157989935 157989469 Y KIRREL KIRREL NA NA NA NA KIRREL 28351 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 158994687 158995148 158994758 Y OR6P1,OR10X1,OR10Z1,OR6K3,OR6N1,OR6N2,MNDA,IFI16,FCER1A IFI16 NA NA NA NA IFI16 26929 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 159819832 159820037 159819980 Y SLAMF9,SLAMF8,TAGLN2 SLAMF8,C1orf204,VSIG8,CCDC19 NA NA NA NA C1orf204 3100 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 159859603 159860031 159859945 Y SLAMF9,COPA,SLAMF8,TAGLN2 C1orf204,VSIG8,CCDC19,TAGLN2 C1orf204,SLAMF8 IMR90 Hi-C 24141950 CCDC19 7922 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr1 160182240 160182579 160182410 Y NA PEA15,RP11-574F21.2 NA NA NA NA PEA15 9113 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 160881277 160881698 160881498 Y NA RP11-312J18.5 CD244,ITLN1 IMR90 Hi-C 24141950 RP11-312J18.5 18507 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 160972513 160972848 160972620 Y SLAMF7,USF1,ARHGAP30 F11R,TSTD1,USF1 NA NA NA NA F11R 16290 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 161359666 161360218 161359899 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 77619 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 162511455 162511984 162511719 Y UAP1,UHMK1 UHMK1,UAP1 NA NA NA NA UAP1 17339 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 163006587 163006657 163006633 Y RGS4,RGS4,RGS4 NA C1orf110 IMR90 Hi-C 24141950 NUF2 227709 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 167192959 167193266 167193111 Y NA POU2F1 NA NA NA NA POU2F1 4893 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 171407653 171408026 171407772 Y FMO4,PRRC2C PRRC2C PRRC2C IMR90 Hi-C 24141950 PRRC2C 44625 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 176174471 176174980 176174673 Y RFWD2 NA NA NA NA NA RFWD2 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 182274457 182274562 182274517 Y NA NA GLUL K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNASEL 281829 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 183129116 183129507 183129296 Y LAMC2 LAMC2 LAMC2 IMR90 Hi-C 24141950 LAMC2 23866 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 183241451 183241867 183241650 Y LAMC1 NA LAMC2 IMR90 Hi-C 24141950 LAMC2 88078 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 183579279 183579568 183579440 Y NA ARPC5 NA NA NA NA ARPC5 23324 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 183594812 183595033 183594923 Y NA ARPC5 NA NA NA NA ARPC5 7859 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 185408687 185409225 185409010 Y NA NA IVNS1ABP,LOC100288079 IMR90 Hi-C 24141950 IVNS1ABP 124226 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 185536131 185536449 185536350 Y NA NA IVNS1ABP,SWT1,MIR548F1,HMCN1 IMR90 Hi-C 24141950 HMCN1 165234 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 190286298 190286417 190286358 Y FAM5C NA NA NA NA NA RGS2 2489752 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 191624673 191624706 191624690 Y NA NA NA NA NA NA RGS2 1151463 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 192458942 192459176 192459156 Y RGS2,RGS13,RGS1 NA RGS1,RGS2 IMR90 Hi-C 24141950 RGS2 316993 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 198845240 198845523 198845521 Y NA NA NA NA NA NA RP11-553K8.2 279242 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 198903935 198904934 198904858 Y PTPRC NA NA NA NA NA RP11-553K8.2 337937 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 201236006 201236165 201236054 Y LAD1,C1orf106,PKP1 NA NA NA NA NA IGFN1 78053 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 203481982 203482534 203482093 Y BTG2,ATP2B4 NA NA NA NA NA ATP2B4 111155 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 203489584 203489741 203489635 Y BTG2 NA NA NA NA NA ATP2B4 103948 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 203491011 203491485 203491466 Y PPFIA4,SNRPE NA NA NA NA NA ATP2B4 102204 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 203576404 203576703 203576575 Y BTG2,LAX1 ATP2B4 ATP2B4,FMOD,PRELP,OPTC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP2B4 16986 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 204386444 204387188 204386898 Y PPP1R15B PPP1R15B NA NA NA NA PPP1R15B 7525 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 205144631 205144860 205144785 Y NA DSTYK NA NA NA NA DSTYK 33867 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 206859136 206859493 206859328 Y IKBKE,RASSF5,RASSF5,MAPKAPK2 MAPKAPK2 NA NA NA NA MAPKAPK2 2847 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 207998055 207998202 207998154 Y NA C1orf132 NA NA NA NA C1orf132 42293 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 209829183 209829498 209829302 Y IRF6,G0S2,LAMB3,LAMB3,LAMB3 LAMB3,G0S2 NA NA NA NA LAMB3 5372 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 209830400 209831026 209830727 Y TRAF3IP3,G0S2,C1orf74,LAMB3 LAMB3,G0S2 NA NA NA NA LAMB3 6589 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 210056461 210057439 210056772 Y NA NA DIEXF,SYT14 IMR90 Hi-C 24141950 SYT14 52099 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 211786767 211786829 211786805 Y NA SLC30A1 SLC30A1,NEK2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC30A1 36683 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 212658172 212658571 212658328 Y ATF3,ATF3,ATF3 NA ATF3,FAM71A,ANGEL2,NENF,BATF3,TATDN3,NSL1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NENF 53943 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 212769584 212769966 212769788 Y ANGEL2,PPP2R5A,ATF3,ATF3,ATF3 ATF3 NA NA NA NA ATF3 32908 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 213545455 213545863 213545754 Y NA NA NA NA NA NA RPS6KC1 322866 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 214620076 214620672 214620502 Y NA NA NA NA NA NA PTPN14 103120 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 216938634 216938811 216938777 Y NA NA NA NA NA NA GPATCH2 863613 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 218669910 218670282 218669996 Y NA NA TGFB2,LOC643723,LOC728463 IMR90 Hi-C 24141950 TGFB2 152333 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 218671989 218672275 218672071 Y NA NA TGFB2,LOC643723,LOC728463 IMR90 Hi-C 24141950 TGFB2 154412 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 218758903 218759111 218758977 Y NA NA TGFB2 IMR90 Hi-C 24141950 TGFB2 241326 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 221899063 221899285 221899220 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 14233 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 221916049 221916599 221916319 Y DUSP10,DUSP10 DUSP10 NA NA NA NA DUSP10 2531 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 222002644 222003471 222003177 Y DUSP10,DUSP10 NA DUSP10 IMR90 Hi-C 24141950 DUSP10 89126 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 222060426 222060817 222060685 Y NA NA DUSP10 MCF7 ChIA-PET 22265404 DUSP10 146908 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 222142763 222142919 222142838 Y NA NA DUSP10 IMR90 Hi-C 24141950 DUSP10 229245 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 222144602 222144957 222144787 Y NA NA DUSP10 IMR90 Hi-C 24141950 DUSP10 231084 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 222161205 222161607 222161394 Y DUSP10 NA DUSP10 IMR90 Hi-C 24141950 DUSP10 247687 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 222638782 222639204 222638963 Y NA NA DUSP10,MIA3,AIDA,BROX IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 HHIPL2 80241 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 223925260 223925580 223925340 Y NA CAPN2 NA NA NA NA CAPN2 37965 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 224032316 224032686 224032418 Y CAPN2,FBXO28,TP53BP2 TP53BP2 NA NA NA NA TP53BP2 642 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 224180261 224180516 224180350 Y NA NA NA NA NA NA FBXO28 119273 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 224685994 224686507 224686055 Y NA NA WDR26,CNIH3 IMR90 Hi-C 24141950 WDR26 63259 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 226890865 226891416 226891300 Y ITPKB NA NA NA NA NA PSEN2 164469 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 227953974 227954299 227954123 Y IBA57 SNAP47,JMJD4 NA NA NA NA JMJD4 32862 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 227976197 227976490 227976208 Y NA NA NA NA NA NA JMJD4 55085 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 229131021 229131272 229131196 Y RHOU NA RHOU IMR90 Hi-C 24141950 RP5-1061H20.4 273503 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 230282048 230282189 230282138 Y NA NA NA NA NA NA GALNT2 90512 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 232765644 232766127 232765957 Y NA NA TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 RNU1-74P 199806 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr1 234559176 234559516 234559346 Y NA NA NA NA NA NA RP5-827C21.4 51837 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 234630919 234631525 234631418 Y TARBP1 TARBP1 LOC100506810,RBM34,IRF2BP2,ARID4B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TARBP1 18070 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr1 234728712 234729023 234728867 Y NA IRF2BP2 NA NA NA NA IRF2BP2 14248 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 234748100 234748931 234748566 Y IRF2BP2 IRF2BP2 NA NA NA NA IRF2BP2 4829 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 234792654 234793437 234793098 Y NA IRF2BP2 IRF2BP2,TARBP1,LINC00184,LOC100506810 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BP2 49383 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 234908151 234908764 234908277 Y IRF2BP2 NA IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BP2 164880 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 235097868 235098070 235097979 Y IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810,LINC00184,TARBP1,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 192181 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 235133014 235133422 235133155 Y NA NA LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 156829 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 235390754 235391125 235391097 Y NA NA NA NA NA NA RBM34 67982 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 241781298 241781471 241781421 Y NA NA NA NA NA NA OPN3 57207 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 243585242 243585384 243585313 Y CEP170,AKT3,AKT3 NA NA NA NA NA SDCCAG8 167922 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 244486299 244486688 244486462 Y AKT3,AKT3,ADSS NA SDCCAG8,ADSS IMR90 Hi-C 24141950 ADSS 126748 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr1 244512430 244512879 244512496 Y ADSS NA C1orf100,ADSS,AKT3 IMR90 Hi-C 24141950 ADSS 100557 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr1 244613820 244614139 244614120 Y NA ADSS NA NA NA NA ADSS 384 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 384217 384634 384602 Y NA NA NA NA NA NA ZMYND11 205812 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3028046 3028193 3028123 Y NA NA LINC00200 IMR90 Hi-C 24141950 PFKP 78332 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr10 3145163 3145536 3145437 Y PFKP PFKP NA NA NA NA PFKP 38638 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3239590 3239795 3239693 Y NA PITRM1 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PITRM1 26587 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3510310 3510716 3510597 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PITRM1 297307 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr10 3528683 3528786 3528735 Y NA NA LOC100216001,LOC338588,KLF6 IMR90 Hi-C 24141950 KLF6 296687 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3568141 3568290 3568192 Y NA NA NA NA NA NA KLF6 257183 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3845250 3845852 3845788 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 19777 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr10 3846443 3847038 3846804 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 20970 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3848037 3849536 3848891 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 22564 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 3867491 3867713 3867639 Y NA KLF6 LOC338588,LOC100216001,KLF6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF6 42018 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 3893365 3894190 3893886 Y KLF6 NA LOC100216001,LOC338588,KLF6 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 67892 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr10 4283808 4284356 4284092 Y NA NA KLF6,LOC100216001,LOC338588 IMR90 Hi-C 24141950 LINC00702 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 4289203 4289519 4289251 Y NA LINC00702 KLF6,LOC338588,LOC100216001 IMR90 Hi-C 24141950 LINC00702 5099 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 4705159 4705783 4705486 Y NA LINC00704 NA NA NA NA LINC00704 12563 CAGE SK-OV-3-R hg19 FANTOM5 11.8251350786547 chr10 4712833 4713220 4712996 Y NA LINC00704 NA NA NA NA LINC00704 5126 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 4713647 4713873 4713697 Y NA LINC00704 NA NA NA NA LINC00704 4473 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr10 4852300 4852352 4852326 Y NA NA KLF6,NET1 IMR90 Hi-C 24141950 AKR1C1 80444 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 4855217 4855416 4855349 Y NA NA KLF6,NET1 IMR90 Hi-C 24141950 AKR1C1 77380 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 5333644 5334212 5333929 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 118302 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 5334474 5334640 5334544 Y NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 117874 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 5359534 5359986 5359835 Y GDI2 NA NA NA NA NA NET1 92528 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 5608647 5608913 5608759 Y NA RP13-463N16.6,RP11-336A10.5 NET1,CALML5 IMR90 Hi-C 24141950 RP13-463N16.6 27168 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 12749537 12749904 12749742 Y NA NA NA NA NA NA CAMK1D 360056 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 13388296 13388525 13388411 Y NA PHYH NA NA NA NA SEPHS1 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 17052784 17053167 17053021 Y NA NA NA NA NA NA TRDMT1 188886 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 17071536 17072103 17071684 Y VIM,TRDMT1 NA NA NA NA NA TRDMT1 169950 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr10 17104584 17104750 17104681 Y NA NA NA NA NA NA TRDMT1 137303 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 17105178 17105416 17105257 Y NA NA NA NA NA NA TRDMT1 136637 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr10 17280857 17281170 17281014 Y TRDMT1,VIM TRDMT1,VIM,RP11-124N14.3 NA NA NA NA RP11-124N14.3 6025 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 17569630 17569764 17569656 Y VIM NA PTPLA IMR90 Hi-C 24141950 PTPLA 87612 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 18567265 18567424 18567295 Y NSUN6,ARL5B NA NA NA NA NA RP11-499P20.2 265156 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 19927503 19927756 19927630 Y NA NA NA NA NA NA PLXDC2 175412 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 24917417 24917574 24917542 Y NA NA NA NA NA NA ARHGAP21 93023 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 26775274 26775560 26775412 Y APBB1IP,PDSS1,ABI1 NA NA NA NA NA PDSS1 209028 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr10 26775885 26776759 26776046 Y APBB1IP,ABI1 NA NA NA NA NA PDSS1 207829 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 31422679 31422989 31422772 Y ZNF438,ZNF438 NA ARHGAP12,ZEB1,ZNF438,ZEB1-AS1 IMR90 Hi-C 24141950 ZNF438 103813 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 31423488 31423889 31423800 Y NA NA ARHGAP12,ZEB1,ZNF438,ZEB1-AS1 IMR90 Hi-C 24141950 ZNF438 104622 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 32048872 32049424 32049213 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 166318 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 32301568 32301771 32301670 Y NA KIF5B NA NA NA NA KIF5B 41588 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 32438322 32438553 32438446 Y NA RPS4XP11 KIF5B,ARHGAP12,EPC1 IMR90 Hi-C 24141950 RPS4XP11 48101 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 32598255 32598442 32598434 Y NA NA NA NA NA NA EPC1 67284 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 33269452 33269916 33269602 Y C10orf68 RP11-462L8.1,ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 22804 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 33422989 33423776 33423207 Y NA NA ITGB1 IMR90 Hi-C 24141950 ITGB1 130269 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 33425894 33425989 33425946 Y NA NA ITGB1 IMR90 Hi-C 24141950 ITGB1 133174 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 33562254 33562552 33562425 Y ITGB1,ITGB1,NRP1 NA NA NA NA NA NRP1 60638 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 36823544 36823839 36823735 Y NA NA NA NA NA NA CCNY 1289591 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 43905259 43905708 43905446 Y HNRNPF,HNRNPF,HNRNPF HNRNPF NA NA NA NA HNRNPF 2645 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 44100382 44100859 44100681 Y CSGALNACT2 ZNF239,CAP1P2,ZNF485,ZNF32 NA NA NA NA ZNF485 527 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 47057375 47057652 47057526 Y NA NA GPRIN2,ZNF488,LOC643650,SYT15,ANTXRL IMR90 Hi-C 24141950 SYT15 87975 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 47655672 47656071 47655889 Y NA NA AGAP7 MCF7 ChIA-PET 22265404 FAM25B 475991 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 48591812 48592143 48591972 Y ZNF488 NA SYT15 IMR90 Hi-C 24141950 ZNF488 238788 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 49856366 49856702 49856534 Y NA ARHGAP22 NA NA NA NA ARHGAP22 5608 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr10 50382507 50382686 50382541 Y C10orf128 NA NA NA NA NA PGBD3 362400 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 60421235 60421505 60421242 Y NA NA NA NA NA NA BICC1 150335 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 64982889 64983009 64982950 Y NA NA NA NA NA NA NRBF2 91839 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 65026237 65026642 65026597 Y NA NA NA NA NA NA NRBF2 135187 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 65125268 65125651 65125502 Y NA NA NA NA NA NA JMJD1C 98071 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 65196810 65197156 65196994 Y NA JMJD1C NA NA NA NA JMJD1C 26566 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 65389747 65390882 65390384 Y NA NA NA NA NA NA REEP3 110624 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 69609160 69609390 69609211 Y NA DNAJC12,SIRT1 SIRT1 K562 ChIA-PET 22265404 DNAJC12 13236 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 70088080 70088572 70088236 Y SIRT1,PBLD,HNRNPH3 HNRNPH3,PBLD NA NA NA NA HNRNPH3 359 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 70782889 70783013 70782952 Y NA KIAA1279 NA NA NA NA KIAA1279 36402 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 71328689 71329080 71328776 Y NA NA NA NA NA NA TSPAN15 119460 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 72413009 72413391 72413116 Y ADAMTS14 NA ADAMTS14,PRF1,KIAA1274,C10orf27,SGPL1,PCBD1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SGPL1 160326 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 73595852 73596345 73596141 Y C10orf54,PSAP PSAP CDH23 IMR90 Hi-C 24141950 PSAP 12781 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 73620184 73620641 73620392 Y DNAJB12,DDIT4,C10orf54,PSAP PSAP PSAP,C10orf54,CDH23,CHST3 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PSAP 11058 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 74056833 74058104 74057179 Y PSAP,DDIT4,DNAJB12 DDIT4 NA NA NA NA DDIT4 25155 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr10 74091661 74092150 74091920 Y PSAP,DDIT4,DNAJB12 DNAJB12 NA NA NA NA DNAJB12 20838 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 74436264 74436425 74436399 Y CCDC109A,ASCC1,ASCC1 MCU MICU1,OIT3,PLA2G12B,MCU IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MCU 13464 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 75653245 75653472 75653359 Y NA CAMK2G,PLAU NA NA NA NA PLAU 13463 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 78974815 78975138 78974939 Y KCNMA1 NA NA NA NA NA KCNMA1 421215 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 79265772 79266169 79265902 Y KCNMA1 NA NA NA NA NA KCNMA1 130184 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr10 79685177 79685609 79685373 Y NA DLG5 NA NA NA NA DLG5 799 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 80015034 80015301 80015187 Y RPS24 NA NA NA NA NA RPS24 223516 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 80015725 80016226 80016048 Y RPS24 NA NA NA NA NA RPS24 224207 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 80734291 80734943 80734463 Y ZMIZ1,PPIF NA NA NA NA NA ZMIZ1 91849 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 80737664 80737999 80737882 Y ZMIZ1,PPIF NA NA NA NA NA ZMIZ1 88793 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 82296466 82296516 82296492 Y NA RP11-137H2.4 NA NA NA NA RP11-137H2.4 2768 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 93373465 93373915 93373562 Y PPP1R3C PPP1R3C NA NA NA NA PPP1R3C 16896 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 95196959 95197603 95197264 Y NA MYOF NA NA NA NA MYOF 42471 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 95218561 95218998 95218660 Y MYOF MYOF,CEP55 NA NA NA NA MYOF 21076 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 95223953 95224101 95224023 Y NA MYOF,CEP55 NA NA NA NA MYOF 15973 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 95228207 95228553 95228471 Y MYOF,CEP55,CEP55 MYOF,CEP55 NA NA NA NA MYOF 11521 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 101873975 101874319 101874110 Y NA NA CPN1,ERLIN1,CHUK IMR90 Hi-C 24141950 ERLIN1 71772 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 105456300 105456542 105456434 Y NA NA NA NA NA NA OBFC1 219421 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr10 105650011 105650288 105650237 Y GSTO2,GSTO1,MEIR5,MEIR5,COL17A1,SLK OBFC1 SH3PXD2A IMR90 Hi-C 24141950 OBFC1 25675 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 105849432 105849729 105849581 Y GSTO1,GSTO1,CCDC147,SLK,MEIR5,MEIR5 SFR1 NA NA NA NA SFR1 30087 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 106020526 106021193 106020581 Y SLK,MEIR5,MEIR5,ITPRIP,CCDC147,GSTO1,GSTO1 WDR96,GSTO1,GSTO2 NA NA NA NA GSTO2 5438 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 112116359 112116685 112116467 Y DUSP5,MXI1 NA SMC3,DUSP5,SMNDC1,RBM20 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMNDC1 53650 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 112158460 112158738 112158533 Y DUSP5 NA SMC3,DUSP5 IMR90 Hi-C 24141950 SMNDC1 95751 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 112290201 112290297 112290249 Y NA DUSP5,SMC3 NA NA NA NA DUSP5 34605 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 114718173 114718547 114718195 Y NA TCF7L2 NA NA NA NA TCF7L2 10164 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 114847181 114847492 114847280 Y TCF7L2 NA NA NA NA NA TCF7L2 139172 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 116080506 116080782 116080645 Y AFAP1L2 NA NA NA NA NA AFAP1L2 81733 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 116392908 116393338 116393223 Y ABLIM1 ABLIM1 NA NA NA NA ABLIM1 49424 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 116394389 116394785 116394496 Y ABLIM1 ABLIM1 NA NA NA NA ABLIM1 47977 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 123873239 123873409 123873290 Y NA NA NA NA NA NA TACC2 126550 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 123900798 123900950 123900924 Y TACC2 NA NA NA NA NA TACC2 154109 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 124254349 124254758 124254614 Y NA HTRA1 NA NA NA NA HTRA1 35308 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 126359464 126359807 126359742 Y ZRANB1,FAM53B NA NA NA NA NA FAM53B 71031 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 126773443 126773862 126773517 Y NA NA NA NA NA NA CTBP2 73877 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 127576052 127576450 127576389 Y NA RNU2-42P,DHX32,FANK1 NA NA NA NA RNU2-42P 797 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 127714877 127714997 127714888 Y NA NA NA NA NA NA FANK1 131769 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 127751033 127751319 127751198 Y NA NA NA NA NA NA FANK1 167925 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr10 127936160 127936570 127936368 Y NA NA NA NA NA NA ADAM12 138454 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 133794080 133794414 133794353 Y NA BNIP3 PPP2R2D IMR90 Hi-C 24141950 BNIP3 645 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr10 134122010 134122092 134122081 Y NA STK32C,LRRC27 DPYSL4 IMR90 Hi-C 24141950 STK32C 21259 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr10 134360968 134361428 134361255 Y INPP5A INPP5A NA NA NA NA INPP5A 11644 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 355877 356724 356385 Y NA IFITM3,B4GALNT4,PKP3 IFITM1,IFITM2,RIC8A,BET1L,ATHL1,PKP3 K562,MCF7 ChIA-PET 22265404 B4GALNT4 11072 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 1147842 1148157 1148045 Y NA NA MUC5B MCF7 ChIA-PET 22265404 TOLLIP 180727 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 3180503 3180713 3180608 Y ART1 OSBPL5 NA NA NA NA OSBPL5 5256 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 5504793 5505065 5505006 Y NA NA NA NA NA NA TRIM6 110274 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 6699628 6699937 6699850 Y OR52W1,OR10A4,OR10A2,OR6A2,OR2AG1,OR2AG2 DCHS1,MRPL17 NA NA NA NA MRPL17 2695 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 9250767 9251109 9250945 Y NA DENND5A NA NA NA NA DENND5A 33828 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 9587499 9588027 9587720 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1 ZNF143,LOC644656 MCF7,K562 ChIA-PET 22265404 WEE1 5201 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 9590279 9590748 9590469 Y WEE1,WEE1 WEE1 LOC644656,ZNF143 K562,MCF7 ChIA-PET 22265404 WEE1 2480 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 9636768 9636900 9636824 Y DENND5A,ZNF143,WEE1,WEE1,SWAP70 WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 43540 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 10373282 10373523 10373408 Y ADM,AMPD3 ADM SBF2,MRVI1,MRVI1-AS1,ADM,LOC283104 IMR90 Hi-C 24141950 ADM 49055 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 11998818 11999068 11999003 Y MICALCL DKK3 NA NA NA NA DKK3 30248 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 12013824 12014110 12014066 Y DKK3,DKK3,DKK3 DKK3 NA NA NA NA DKK3 15206 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12109558 12109847 12109697 Y PARVA,MICALCL,MICAL2 RP13-631K18.5,MICAL2 MICAL2,TEAD1,MICALCL,DKK3,USP47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RP13-631K18.5 3120 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12111660 12111980 12111765 Y NA RP13-631K18.5,MICAL2 MICAL2,TEAD1,MICALCL,DKK3,USP47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MICAL2 1563 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12133218 12133350 12133292 Y MICAL2 RP13-631K18.5,MICAL2 NA NA NA NA MICAL2 19675 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12146355 12146795 12146568 Y NA RP13-631K18.5,MICAL2 NA NA NA NA MICAL2 32812 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12184848 12185162 12185016 Y NA NA NA NA NA NA MICAL2 71305 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12188567 12188982 12188726 Y NA NA NA NA NA NA MICAL2 75024 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12197316 12197738 12197633 Y MICAL2,MICALCL NA NA NA NA NA MICAL2 83773 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12204138 12204505 12204342 Y MICAL2,MICALCL NA NA NA NA NA MICAL2 90595 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 12222498 12222995 12222733 Y MICAL2,PARVA,MICALCL NA NA NA NA NA MICAL2 108955 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 12309352 12309734 12309588 Y TEAD1,DKK3,MICAL2,PARVA,MICALCL NA NA NA NA NA PARVA 86998 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 12824175 12824668 12824395 Y TEAD1 NA NA NA NA NA TEAD1 130206 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 13283262 13283494 13283392 Y NA ARNTL ARNTL IMR90 Hi-C 24141950 ARNTL 12705 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 16924689 16924921 16924805 Y NA NA NA NA NA NA RP11-466H18.1 69639 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 18404883 18405218 18405078 Y LDHA LDHA NA NA NA NA LDHA 8717 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 19717488 19717496 19717492 Y NAV2 NA NA NA NA NA ZDHHC13 580842 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 22362163 22362363 22362263 Y FANCF,SLC17A6 NA NA NA NA NA ANO5 149441 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 27231187 27231325 27231258 Y NA RP11-1L12.3 LIN7C,LGR4,CCDC34,BDNF-AS1 IMR90 Hi-C 24141950 RP11-1L12.3 8335 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 27419147 27419279 27419213 Y NA CCDC34 NA NA NA NA CCDC34 35732 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 27739901 27740316 27740092 Y BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF BDNF NA NA NA NA BDNF 1289 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 27956455 27956618 27956527 Y BDNF,BDNF,BDNF,BDNF,BDNF,BDNF RP11-1033A18.1 BDNF IMR90 Hi-C 24141950 RP11-1033A18.1 45875 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 28128920 28129110 28128941 Y METTL15 METTL15,KIF18A NA NA NA NA KIF18A 1065 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 28792909 28793103 28792913 Y NA NA BDNF IMR90 Hi-C 24141950 RP11-115J23.1 70747 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 28855204 28855664 28855372 Y NA NA BDNF-AS1,BDNF IMR90 Hi-C 24141950 RP11-115J23.1 133042 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 28857853 28858464 28857991 Y NA NA BDNF-AS1,BDNF IMR90 Hi-C 24141950 RP11-115J23.1 135691 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 29141601 29141895 29141706 Y NA NA BDNF,BDNF-AS1 IMR90 Hi-C 24141950 RP11-115J23.1 419439 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 33427027 33427076 33427050 Y NA NA C11orf41,C11orf91 IMR90 Hi-C 24141950 HIPK3 150809 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 33711808 33712191 33712002 Y CD59 CD59 NA NA NA NA CD59 43800 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr11 33713598 33714029 33713919 Y CD59 CD59 NA NA NA NA CD59 41962 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 35052236 35052689 35052493 Y CD44 NA SLC1A2,CD44,PDHX IMR90 Hi-C 24141950 CD44 105728 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 35099118 35099616 35099383 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 58801 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 35103874 35105511 35104330 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 52906 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 35186946 35187176 35187019 Y CD44 CD44 NA NA NA NA CD44 28529 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 35358493 35359078 35358891 Y CD44 NA NA NA NA NA CD44 200076 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 45201958 45202605 45202216 Y NA NA NA NA NA NA TP53I11 231118 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 46270167 46270467 46270346 Y CREB3L1 CREB3L1 CREB3L1,PHF21A,DGKZ IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CREB3L1 26745 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 47168963 47169205 47169084 Y NA ARFGAP2,PACSIN3 NA NA NA NA ARFGAP2 27471 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 60934770 60935212 60935096 Y SLC15A3,TMEM138,SDHAF2,CYBASC3,CYBASC3,CPSF7,CPSF7,VPS37C VPS37C VPS37C K562 ChIA-PET 22265404 VPS37C 7681 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 61523945 61524112 61524089 Y INCENP,DAK,C11orf9 FEN1,FADS2 NA NA NA NA FEN1 33997 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 62320979 62321244 62321106 Y NA AHNAK,EEF1G,MIR3654,TUT1,MTA2 NA NA NA NA AHNAK 463 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 63712623 63712721 63712672 Y NA NAA40,COX8A,AP000721.4,OTUB1 NA NA NA NA NAA40 8192 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 64916686 64916783 64916734 Y NRXN2,C11orf85 ZNHIT2,MRPL49,FAU,SYVN1,CAPN1 SYVN1,CAPN1,SPDYC MCF7,K562 ChIA-PET 22265404 SYVN1 16682 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 65187297 65188198 65187553 Y BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 FRMD8,NEAT1,AP000769.1 NEAT1 IMR90 Hi-C 24141950 NEAT1 47 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 65244638 65245303 65245021 Y BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 AP000769.1,MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 17930 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 65261229 65261625 65261527 Y CDC42EP2 AP000769.1,MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 1608 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 65666492 65667203 65666864 Y RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B MUS81,CFL1,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1 NA NA NA NA FOSL1 448 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 65679250 65679576 65679373 Y RIN1,BRMS1,SCYL1,SSSCA1,PCNXL3,RNASEH2C,CFL1,MUS81,FIBP,CCDC85B,YIF1A,RAB1B,KLC2,KLC2,KLC2,FOSL1,DRAP1,C11orf68,BANF1 FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1 NA NA NA NA C11orf68 5012 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 65782974 65783337 65783107 Y FOSL1 BANF1,EIF1AD,CATSPER1,SF3B2 NA NA NA NA CATSPER1 8651 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 66844888 66845141 66844944 Y RHOD RHOD,KDM2A NA NA NA NA RHOD 22599 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 66845907 66846062 66845990 Y PITPNM1,CLCF1,CLCF1,RBM4,KDM2A,ADRBK1,RHOD RHOD,KDM2A NA NA NA NA RHOD 23618 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 67138852 67139479 67139267 Y NA POLD4,RAD9A,PPP1CA NA NA NA NA AP003419.11 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 69067534 69068152 69067999 Y TPCN2 MYEOV NA NA NA NA MYEOV 7929 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 69089155 69089700 69089444 Y MRGPRD MYEOV CCND1 MCF7 ChIA-PET 22265404 MYEOV 29550 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 69197125 69197542 69197234 Y ORAOV1,MYEOV NA MYEOV,CCND1 IMR90 Hi-C 24141950 MYEOV 137520 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 69453520 69454472 69453912 Y NA ORAOV1 NA NA NA NA CCND1 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 70470330 70470512 70470409 Y NA NA NA NA NA NA CTTN 227820 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 71704625 71704847 71704670 Y NA NA NA NA NA NA RNF121 66878 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 74465903 74466299 74466070 Y POLD3,RNF169 RNF169 XRRA1 IMR90 Hi-C 24141950 RNF169 7990 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 77751153 77751354 77751183 Y NA INTS4,KCTD14,NDUFC2-KCTD14,NDUFC2 NA NA NA NA KCTD14 3883 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 85419491 85419865 85419792 Y SYTL2 CREBZF NA NA NA NA CREBZF 27540 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 86451588 86451883 86451813 Y NA PRSS23 PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 48218 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 86452946 86453377 86453076 Y NA PRSS23 PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 46724 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 86454484 86454767 86454607 Y NA PRSS23 PRSS23,ME3,CCDC81 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRSS23 45334 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 95888064 95888524 95888506 Y NA NA NA NA NA NA MAML2 185820 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 95888692 95889856 95889448 Y FAM76B,MAML2,JRKL,CCDC82 NA NA NA NA NA MAML2 184488 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 96040167 96040456 96040282 Y MAML2 MAML2 NA NA NA NA MAML2 33888 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 96047326 96047750 96047695 Y MAML2 MAML2 NA NA NA NA MAML2 26594 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 100590591 100590889 100590693 Y NA ARHGAP42 NA NA NA NA ARHGAP42 34207 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 100747572 100748094 100747776 Y NA NA NA NA NA NA ARHGAP42 191188 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 106115980 106116272 106116008 Y NA NA NA NA NA NA KBTBD3 169488 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 106239516 106239921 106239716 Y NA NA NA NA NA NA KBTBD3 293024 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 109870773 109871141 109870859 Y FDX1,ZC3H12C NA ZC3H12C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZC3H12C 90946 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 114162155 114162496 114162247 Y NA NNMT NA NA NA NA NNMT 35646 CAGE SK-OV-3-R hg19 FANTOM5 7.27700620224906 chr11 114224881 114225192 114225037 Y NA RBM7,C11orf71 FAM55B,REXO2,C11orf71,RBM7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM7 43560 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 114312879 114313299 114312892 Y NA RBM7,C11orf71,REXO2 NA NA NA NA REXO2 4771 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 115741521 115741886 115741709 Y NA NA CADM1 IMR90 Hi-C 24141950 CADM1 367846 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 117679991 117680281 117680071 Y IL10RA FXYD2 NA NA NA NA FXYD2 17132 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 118490168 118490609 118490335 Y PHLDB1 ARCN1,IFT46,PHLDB1 NA NA NA NA PHLDB1 15013 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr11 118800245 118800827 118800413 Y MLL,DDX6,VPS11,RPS25,CBL,C2CD2L,CXCR5,CXCR5,CCDC84 BCL9L NA NA NA NA BCL9L 5928 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 120080670 120080875 120080711 Y NA OAF,POU2F3 NA NA NA NA OAF 1195 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 121107211 121107513 121107369 Y SC5DL,SC5DL NA SORL1 IMR90 Hi-C 24141950 SORL1 213399 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 121314934 121315243 121315071 Y NA SORL1 SORL1 IMR90 Hi-C 24141950 SORL1 5669 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 122059856 122060218 122060121 Y NA MIRLET7A2 NA NA NA NA MIRLET7A2 44555 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 122405364 122405463 122405414 Y NA NA SORL1,LOC341056 IMR90 Hi-C 24141950 RP11-820L6.1 113785 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 123394284 123394590 123394437 Y NA NA NA NA NA NA ZNF202 215793 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 126506687 126507034 126506855 Y NA NA NA NA NA NA ST3GAL4 283152 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 128318387 128318699 128318622 Y NA NA NA NA NA NA ETS1 136754 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr11 128366966 128367159 128367092 Y ETS1 NA NA NA NA NA ETS1 88294 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 128367325 128367539 128367441 Y NA NA NA NA NA NA ETS1 87914 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 128377315 128377487 128377422 Y FLI1,FLI1,ETS1 NA NA NA NA NA ETS1 77966 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 129942098 129942391 129942179 Y PRDM10 TCEB2P2,APLP2 NA NA NA NA APLP2 4366 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 130392180 130392594 130392285 Y NA NA SNX19,ADAMTS15 IMR90 Hi-C 24141950 ADAMTS15 75311 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr11 130450344 130450649 130450537 Y NA NA ADAMTS15 IMR90 Hi-C 24141950 ADAMTS15 133475 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 3913952 3914004 3913978 Y NA NA NA NA NA NA C12orf5 514367 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 6202352 6202551 6202452 Y CD9,ANO2 NA NA NA NA NA CD9 104330 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 6539566 6540029 6539921 Y NA RP1-102E24.9,VAMP1 NA NA NA NA RP1-102E24.9 5635 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 10409972 10410105 10410016 Y NA GABARAPL1 NA NA NA NA GABARAPL1 46915 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 10458129 10458269 10458205 Y KLRC3,KLRC4-KLRK1,KLRC1,KLRK1,KLRC4,KLRC2,KLRC1,KLRF1,KLRD1,KLRD1 NA NA NA NA NA GABARAPL1 95072 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 12911881 12912260 12911941 Y NA CDKN1B NA NA NA NA CDKN1B 45889 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 12957478 12957757 12957559 Y GPRC5A DDX47 NA NA NA NA DDX47 6493 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 13253893 13254547 13254171 Y CDKN1B,EMP1 NA NA NA NA NA KIAA1467 58675 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 20975224 20975562 20975349 Y NA NA NA NA NA NA PYROXD1 612987 CAGE SK-OV-3-R hg19 FANTOM5 11.8251350786547 chr12 25539082 25539407 25539207 Y NA NA BCAT1,LYRM5,CASC1,KRAS,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 137212 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 26130090 26130317 26130202 Y NA RASSF8 NA NA NA NA RASSF8 20128 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 26267263 26267811 26267415 Y NA RP11-283G6.3 NA NA NA NA RP11-283G6.3 9739 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 27484254 27484540 27484416 Y FGFR1OP2,STK38L ARNTL2 NA NA NA NA ARNTL2 467 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 27678444 27678624 27678473 Y PPFIBP1 PPFIBP1 NA NA NA NA PPFIBP1 4080 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 28119724 28120118 28120115 Y MANSC4,PTHLH,PTHLH NA NA NA NA NA CCDC91 164064 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 28127967 28128359 28128243 Y PTHLH,PTHLH NA NA NA NA NA CCDC91 155823 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 28179755 28179885 28179817 Y PTHLH,PTHLH NA PTHLH IMR90 Hi-C 24141950 CCDC91 104297 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr12 29601520 29601624 29601572 Y NA NA NA NA NA NA ERGIC2 69398 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 30945631 30945953 30945771 Y NA CAPRIN2,LINC00941 NA NA NA NA LINC00941 24 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 30949517 30949896 30949519 Y CAPRIN2 CAPRIN2,LINC00941 NA NA NA NA LINC00941 3540 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 31902136 31902566 31902240 Y C12orf35,AMN1,H3F3C AMN1,H3F3C AMN1 K562 ChIA-PET 22265404 AMN1 22028 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr12 32543557 32543792 32543676 Y NA NA NA NA NA NA BICD1 285788 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 39539251 39539539 39539453 Y NA NA NA NA NA NA CPNE8 240019 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 43699836 43700036 43699910 Y NA NA PRICKLE1,PPHLN1,ZCRB1 IMR90 Hi-C 24141950 PUS7L 450584 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 45820263 45820702 45820515 Y NA NA NA NA NA NA PLEKHA8P1 212439 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 46918651 46918824 46918737 Y NA NA SLC38A2,SLC38A4,SLC38A1,AMIGO2 IMR90 Hi-C 24141950 SLC38A2 154001 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 47474423 47475249 47474825 Y NA AMIGO2 NA NA NA NA AMIGO2 2689 CAGE SK-OV-3-R hg19 FANTOM5 7.27700620224906 chr12 47476610 47477096 47476829 Y NA AMIGO2 NA NA NA NA AMIGO2 4876 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 47670448 47670925 47670783 Y NA NA AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMIGO2 198714 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 47671815 47672221 47672059 Y NA NA AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMIGO2 200081 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 47701468 47701752 47701723 Y NA NA AMIGO2,MIR4698,LOC100233209,FAM113B IMR90 Hi-C 24141950 AMIGO2 229734 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 48053201 48053247 48053224 Y ASB8 RPAP3,RP1-197B17.3 NA NA NA NA RPAP3 44597 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 49628278 49628526 49628405 Y LMBR1L,TUBA1A TUBA1C,TUBA1A DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1A 47171 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 50056796 50057319 50056974 Y TMBIM6,NCKAP5L,FMNL3 TMBIM6,FMNL3 NA NA NA NA TMBIM6 42189 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 51180627 51180997 51180727 Y SMAGP ATF1 TMPRSS12 IMR90 Hi-C 24141950 ATF1 25134 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 52540964 52541526 52541224 Y KRT80,KRT7,KRT6A,KRT5,NR4A1,C12orf44 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 42258 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr12 52542210 52542726 52542513 Y KRT80,KRT7,KRT6B,KRT6A,KRT5,C12orf44 KRT80 KRT8,KRT84 MCF7 ChIA-PET 22265404 KRT80 41058 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 52545730 52546132 52545994 Y KRT6A,C12orf44 KRT80 NA NA NA NA KRT80 37652 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 52580785 52580889 52580797 Y NA KRT80,KRT7 NA NA NA NA KRT80 2895 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 53229830 53230092 53229928 Y PFDN5 NA NA NA NA NA KRT18 110563 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 53267781 53268340 53268093 Y PFDN5 NA KRT18,KRT8,LOC283403,EIF4B,KRT80,LOC283404 MCF7 ChIA-PET 22265404 KRT18 72315 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 53611077 53612140 53611274 Y PRR13,PFDN5 ZNF740,CSAD,MFSD5,ESPL1 NA NA NA NA MFSD5 30895 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 53615195 53615822 53615501 Y CSAD,SP1,PRR13,PFDN5 ZNF740,CSAD,MFSD5,ESPL1 NA NA NA NA MFSD5 27213 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 53955466 53955638 53955506 Y NA NA NA NA NA NA ATF7 62561 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 54817026 54817278 54817202 Y GPR84,ZNF385A,ITGA5,NCKAP1L ITGA5 ZNF385A IMR90 Hi-C 24141950 ITGA5 5782 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 56218960 56219310 56218990 Y OR6C3,OR6C65,OR6C2,OR6C4,OR10P1,IKZF4 SARNP,ORMDL2,TMEM198B,DNAJC14 NA NA NA NA TMEM198B 2219 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 56356198 56356265 56356248 Y CDK2,PMEL DGKA,WIBG,CDK2,RAB5B,SUOX NA NA NA NA CDK2 2288 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 57028610 57029302 57028864 Y NA BAZ2A,ATP5B NA NA NA NA BAZ2A 10 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr12 57813803 57814254 57814252 Y NA R3HDM2 NA NA NA NA R3HDM2 8534 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 58349067 58349080 58349075 Y XRCC6BP1 RP11-620J15.3,XRCC6BP1 NA NA NA NA XRCC6BP1 15743 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 58903110 58903474 58903296 Y NA NA LRIG3 IMR90 Hi-C 24141950 XRCC6BP1 569786 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 59435116 59435480 59435298 Y NA NA LRIG3 IMR90 Hi-C 24141950 SLC16A7 552368 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 59460921 59461120 59461028 Y LRIG3,LRIG3 NA LRIG3 IMR90 Hi-C 24141950 SLC16A7 526728 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 62525889 62526278 62526197 Y MON2,FAM19A2 NA NA NA NA NA USP15 125841 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 63118880 63119001 63118911 Y NA NA NA NA NA NA RP11-631N16.2 124348 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 63179567 63180349 63179723 Y NA NA NA NA NA NA RPL14P1 176746 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 64482177 64482504 64482346 Y SRGAP1,TBK1,C12orf66 NA NA NA NA NA C12orf66 131572 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 65930655 65931175 65930934 Y HMGA2 NA MSRB3,HMGA2,RPSAP52 IMR90 Hi-C 24141950 RP11-221N13.3 63474 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 65997532 65998101 65997899 Y HMGA2 RP11-221N13.3,RP11-230G5.2 RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 RP11-221N13.3 2883 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 66012877 66013074 66012996 Y NA RP11-221N13.3,RP11-230G5.2 RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 RP11-221N13.3 18228 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 66025227 66025796 66025503 Y NA RP11-221N13.3,RP11-230G5.2 RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 RP11-230G5.2 8356 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 66034360 66034755 66034412 Y NA RP11-221N13.3,RP11-230G5.2 RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 RP11-230G5.2 208 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 66042799 66043321 66043056 Y NA RP11-221N13.3,RP11-230G5.2 RPSAP52,HMGA2,MSRB3 IMR90 Hi-C 24141950 RP11-230G5.2 8647 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 68221654 68222227 68222103 Y NA NA DYRK2 IMR90 Hi-C 24141950 DYRK2 181536 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 68705850 68706149 68706026 Y IL22,SLC35E3,NUP107,MDM2,MDM1 MDM1 NA NA NA NA MDM1 18012 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 69036661 69037118 69036873 Y NA RAP1B,RP11-254B13.3,NUP107 NA NA NA NA RP11-254B13.3 1888 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 69446892 69447106 69446965 Y RAP1B,LYZ,CPM NA CPM,MDM2 IMR90 Hi-C 24141950 CPM 83542 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 70648828 70649035 70648891 Y RAB3IP,CNOT2,CNOT2,CNOT2 CNOT2,RP11-611E13.2 NA NA NA NA RP11-611E13.2 13688 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 71040722 71040853 71040780 Y CNOT2,CNOT2,CNOT2,PTPRB NA NA NA NA NA KCNMB4 282666 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 71055637 71055848 71055742 Y NA NA NA NA NA NA KCNMB4 297581 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76034915 76034997 76034960 Y NA NA PHLDA1 IMR90 Hi-C 24141950 KRR1 131499 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 76053870 76054229 76054024 Y NA NA PHLDA1,NAP1L1,OSBPL8 IMR90 Hi-C 24141950 KRR1 150454 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76337836 76338217 76338130 Y GLIPR1,PHLDA1 NA PHLDA1 MCF7 ChIA-PET 22265404 PHLDA1 87495 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76338350 76338647 76338468 Y GLIPR1,PHLDA1 NA PHLDA1 MCF7 ChIA-PET 22265404 PHLDA1 87065 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 76347823 76348161 76347983 Y GLIPR1,PHLDA1 NA PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 77551 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76373014 76373318 76373236 Y GLIPR1,PHLDA1 NA OSBPL8,PHLDA1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHLDA1 52394 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr12 76375899 76376264 76376114 Y NA PHLDA1 PHLDA1,KRR1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PHLDA1 49448 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76414095 76414311 76414227 Y NA PHLDA1 NA NA NA NA PHLDA1 11401 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76414369 76415079 76414685 Y NA PHLDA1 NA NA NA NA PHLDA1 10633 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 76751627 76751939 76751780 Y NA BBS10 NA NA NA NA BBS10 11405 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 77377580 77377874 77377727 Y NA NA ZDHHC17 IMR90 Hi-C 24141950 E2F7 79486 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 77425555 77425931 77425698 Y OSBPL8 E2F7 NA NA NA NA E2F7 31429 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 77456593 77456922 77456786 Y E2F7 E2F7 NA NA NA NA E2F7 438 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr12 82362285 82362429 82362357 Y NA NA NA NA NA NA CCDC59 388155 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 86051841 86052071 86051956 Y NA NA NA NA NA NA ALX1 379956 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 87822808 87822965 87822871 Y NA NA NA NA NA NA C12orf29 602658 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 88968059 88968366 88968242 Y NA KITLG NA NA NA NA KITLG 4262 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 89619217 89620117 89619718 Y DUSP6,ATP2B1 NA DUSP6,LOC728084,POC1B MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 DUSP6 124931 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 91499594 91499827 91499730 Y NA LUM NA NA NA NA LUM 3781 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 92474192 92474586 92474423 Y BTG1 NA NA NA NA NA BTG1 63087 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 92938242 92938374 92938331 Y BTG1,CLLU1 NA NA NA NA NA EEA1 382733 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 92987343 92988147 92987837 Y EEA1,BTG1 NA DCN,LOC256021 IMR90 Hi-C 24141950 EEA1 332960 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 93277124 93277496 93277306 Y NA EEA1 NA NA NA NA EEA1 43611 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 94817703 94818348 94818256 Y NA RBMS2P1,CCDC41 NA NA NA NA RBMS2P1 958 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 95597894 95598075 95597980 Y NA FGD6,VEZT NA NA NA NA FGD6 11183 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 96027120 96027372 96027186 Y LTA4H NA NTN4 IMR90 Hi-C 24141950 USP44 83854 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 96589359 96589977 96589479 Y LTA4H,ELK3 ELK3 NA NA NA NA ELK3 3199 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr12 96613519 96613922 96613765 Y NA ELK3 NA NA NA NA ELK3 27359 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr12 96819131 96819446 96819342 Y NA CDK17 CDK17,ELK3,LTA4H IMR90 Hi-C 24141950 RN7SKP11 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 96839212 96840356 96839676 Y NEDD1,NEDD1,CDK17 CDK17,RN7SKP11 CDK17 IMR90 Hi-C 24141950 RN7SKP11 19948 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 97205009 97205147 97205078 Y NA NA NEDD1 IMR90 Hi-C 24141950 NEDD1 93854 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 97961446 97962002 97961660 Y NA NA NA NA NA NA NEDD1 662445 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 99532172 99532427 99532300 Y ANKS1B,ANKS1B,ANKS1B NA NA NA NA NA APAF1 495253 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 101099927 101100118 101100023 Y NA NA SLC17A8 IMR90 Hi-C 24141950 RP11-575G13.2 129405 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 101692271 101692665 101692300 Y NA UTP20 NA NA NA NA UTP20 20384 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 105076733 105077008 105076882 Y CHST11,KIAA1033 NA NA NA NA NA CHST11 229660 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 105711063 105711549 105711425 Y C12orf75 RP11-474B16.1 C12orf75,APPL2 IMR90 Hi-C 24141950 RP11-474B16.1 7246 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 108877904 108878160 108878033 Y SSH1,SELPLG,SELPLG FICD NA NA NA NA FICD 28802 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 109117977 109118365 109118310 Y SELPLG,SSH1,CORO1C CORO1C NA NA NA NA CORO1C 5007 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 109227089 109227462 109227320 Y NA NA NA NA NA NA CORO1C 103717 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 109232143 109232504 109232328 Y FICD,SELPLG,CORO1C,SSH1 NA NA NA NA NA CORO1C 108771 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 110704832 110705217 110705054 Y PPTC7 ATP2A2 ANKRD13A,ATP2A2,C12orf76,GIT2,IFT81 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ATP2A2 11344 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 110707461 110707714 110707625 Y NA ATP2A2 ANKRD13A,ATP2A2,C12orf76,GIT2,IFT81 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP2A2 8847 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 111015565 111016027 111015682 Y PPTC7,ARPC3 PPTC7,TCTN1 NA NA NA NA PPTC7 3098 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 111016111 111016444 111016311 Y PPTC7,ARPC3 PPTC7,TCTN1 NA NA NA NA PPTC7 2681 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 113644189 113644365 113644286 Y NA DDX54,TPCN1,IQCD NA NA NA NA TPCN1 12490 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr12 113667617 113667862 113667654 Y DTX1,IQCD,TPCN1 DDX54,TPCN1,IQCD NA NA NA NA IQCD 10718 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 116530359 116530538 116530483 Y NA NA NA NA NA NA MED13L 182605 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 116701070 116701373 116701314 Y MAP1LC3B2,MED13L MED13L NA NA NA NA MED13L 11770 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr12 118263351 118263381 118263366 Y NA NA NA NA NA NA RFC5 186012 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 118745418 118745709 118745623 Y NA NA NA NA NA NA TAOK3 63041 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 120153680 120153798 120153737 Y NA NA NA NA NA NA PRKAB1 50122 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 120668258 120668871 120668569 Y RAB35,DYNLL1,GCN1L1,RPLP0,PXN GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1 NA NA NA NA PXN-AS1 31164 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 120967554 120967708 120967668 Y NA RNF10,COQ5,POP5 NA NA NA NA RNF10 1575 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 122020162 122020238 122020212 Y RNF34,SETD1B,ORAI1,KDM2B,KDM2B KDM2B,ORAI1 NA NA NA NA KDM2B 3242 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 122067749 122067897 122067832 Y ORAI1 ORAI1,MORN3 NA NA NA NA ORAI1 5294 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 122462187 122462386 122462358 Y BCL7A BCL7A,AC156455.1 NA NA NA NA BCL7A 6859 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 122908043 122908483 122908329 Y ZCCHC8,DENR,CLIP1 CLIP1 NA NA NA NA CLIP1 2864 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 123362987 123363145 123363088 Y NA HIP1R,VPS37B NA NA NA NA VPS37B 15846 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 124721310 124721532 124721425 Y NA NA NA NA NA NA CCDC92 265932 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 124875337 124875736 124875419 Y NCOR2 NA NA NA NA NA NCOR2 174399 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 125050856 125051375 125051213 Y UBC,NCOR2 NCOR2 NA NA NA NA NCOR2 721 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 125073637 125073873 125073849 Y UBC NCOR2 NCOR2 IMR90 Hi-C 24141950 NCOR2 23502 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr12 125167246 125167625 125167326 Y UBC NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 NCOR2 117111 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 125424077 125424667 125424516 Y NA UBC,DHX37 UBC IMR90 Hi-C 24141950 UBC 24163 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 126796414 126796868 126796639 Y NA NA NA NA NA NA AC079949.1 851804 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 127567979 127568114 127568034 Y NA NA NA NA NA NA AC079949.1 80558 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr12 133602699 133602978 133602704 Y NA NA NA NA NA NA ZNF140 51446 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 20735697 20735843 20735813 Y PSPC1,ZMYM5 GJA3,GJB2 NA NA NA NA GJA3 2509 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 21607254 21607660 21607524 Y NA LATS2 NA NA NA NA LATS2 26026 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 22583629 22583981 22583861 Y EFHA1 NA NA NA NA NA RPS7P10 382475 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 22688764 22689136 22688963 Y NA NA NA NA NA NA RPS7P10 487610 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 23471356 23471597 23471410 Y NA NA NA NA NA NA FTH1P7 202643 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 24440474 24440724 24440677 Y NA C1QTNF9B-AS1,MIPEP NA NA NA NA C1QTNF9B-AS1 20304 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 24528296 24528692 24528455 Y PCOTH SPATA13 SPATA13,TNFRSF19 IMR90 Hi-C 24141950 SPATA13 23252 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 25880585 25880813 25880618 Y MTMR6,NUPL1 MTMR6,NUPL1 NA NA NA NA NUPL1 6923 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 29290769 29291025 29290846 Y POMP NA NA NA NA NA POMP 59528 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 33825211 33825616 33825598 Y NA NA NA NA NA NA STARD13 97151 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 33858244 33858802 33858357 Y NA NA NA NA NA NA STARD13 63965 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 34253090 34253722 34253494 Y NA NA NA NA NA NA RFC3 136464 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 34731212 34731445 34731362 Y NA NA NA NA NA NA RFC3 341026 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr13 37881013 37881265 37881086 Y POSTN NA LINC00547 IMR90 Hi-C 24141950 POSTN 289716 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 40677084 40677323 40677230 Y NA NA NA NA NA NA COG6 449320 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 41560539 41560879 41560717 Y NA NA NA NA NA NA WBP4 72531 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 43632661 43632965 43632672 Y NA DNAJC15 NA NA NA NA DNAJC15 37322 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 43727960 43728297 43728107 Y NA NA ENOX1,DNAJC15,CCDC122,LACC1 IMR90 Hi-C 24141950 DNAJC15 132621 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 44817306 44817618 44817554 Y NA NA TSC22D1,SERP2,LINC00284 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TSC22D1 331665 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 44880536 44881091 44880742 Y C13orf31,CCDC122,C13orf31 NA TSC22D1,LACC1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TSC22D1 268192 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr13 45288309 45288506 45288432 Y KCTD4 NA NUFIP1,TSC22D1,TSC22D1-AS1,SERP2,LINC00330 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TSC22D1 139026 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 45333095 45333256 45333140 Y NA NA TSC22D1,TSC22D1-AS1,NUFIP1 IMR90 Hi-C 24141950 TSC22D1 183812 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 45492137 45492940 45492235 Y TSC22D1 NA NA NA NA NA NUFIP1 68678 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 45711306 45711547 45711428 Y NA GTF2F2 NA NA NA NA GTF2F2 18656 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 45774024 45774110 45774098 Y KCTD4 KCTD4 NA NA NA NA KCTD4 849 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 45941510 45941762 45941695 Y COG3,TPT1 TPT1-AS1,TPT1,SLC25A30 NA NA NA NA TPT1 28005 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 49288768 49288781 49288774 Y NA NA NA NA NA NA RCBTB2 183399 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 51252596 51252863 51252763 Y NA NA DLEU2,DLEU1 IMR90 Hi-C 24141950 RNASEH2B 228951 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 52218923 52219366 52219003 Y WDFY2,DHRS12,DHRS12 NA NA NA NA NA WDFY2 62279 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 52303239 52303556 52303323 Y WDFY2 NA NA NA NA NA WDFY2 146595 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 53765519 53765549 53765534 Y NA NA NA NA NA NA SUGT1 540675 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr13 60723538 60723946 60723707 Y NA DIAPH3 NA NA NA NA DIAPH3 12175 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 64652316 64652644 64652373 Y NA LINC00355 NA NA NA NA LINC00355 4172 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr13 67240182 67240351 67240267 Y NA NA NA NA NA NA LINC00355 2592038 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 67674730 67675228 67675034 Y NA NA NA NA NA NA LINC00355 3026586 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 73909414 73909609 73909563 Y NA NA PIBF1 IMR90 Hi-C 24141950 KLF5 282300 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 74002389 74002533 74002463 Y KLF5 NA KLF5,PIBF1,KLF12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF5 375275 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 74709487 74710034 74709735 Y KLF12 KLF12 NA NA NA NA KLF12 3093 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 75346258 75346396 75346327 Y NA NA NA NA NA NA KLF12 639864 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 85779521 85779874 85779724 Y NA NA NA NA NA NA LINC00351 155862 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr13 94706563 94706645 94706604 Y NA NA NA NA NA NA TGDS 539866 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 95931058 95931197 95931128 Y ABCC4 ABCC4 NA NA NA NA ABCC4 20490 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 95932787 95933077 95933010 Y NA ABCC4 NA NA NA NA ABCC4 18610 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 97188079 97188190 97188135 Y NA NA NA NA NA NA UGGT2 484343 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 97877294 97877762 97877400 Y NA MBNL2 NA NA NA NA MBNL2 5606 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 97908706 97909024 97908751 Y NA MBNL2 NA NA NA NA MBNL2 37018 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr13 99991522 99991909 99991574 Y NA NA NA NA NA NA UBAC2 140494 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 100033242 100033451 100033337 Y DOCK9,UBAC2,UBAC2,GPR18,GPR183,CLYBL NA NA NA NA NA TM9SF2 118220 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 100643838 100643892 100643875 Y NA ZIC5,ZIC2 NA NA NA NA ZIC2 11812 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 108099145 108099375 108099322 Y FAM155A NA NA NA NA NA LIG4 769341 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 108238726 108238999 108238876 Y FAM155A NA NA NA NA NA LIG4 629717 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 109808669 109809037 109808800 Y NA NA NA NA NA NA IRS2 627878 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr13 110439676 110440079 110439929 Y IRS2 IRS2 NA NA NA NA IRS2 2761 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 110669788 110670084 110669997 Y NA NA MYO16 IMR90 Hi-C 24141950 IRS2 232873 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 110995670 110995825 110995748 Y NA COL4A2,COL4A1 NA NA NA NA COL4A1 38174 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 111278486 111278706 111278495 Y NA CARKD NA NA NA NA CARKD 12605 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 111597919 111598063 111597990 Y NA ANKRD10 ARHGEF7 IMR90 Hi-C 24141950 ANKRD10 32503 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 111659256 111659421 111659366 Y NA NA ANKRD10,ARHGEF7 IMR90 Hi-C 24141950 ANKRD10 93840 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 113434951 113435188 113435090 Y NA NA NA NA NA NA ATP11A 92308 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr13 114064803 114065029 114064948 Y NA GRTP1 NA NA NA NA GRTP1 48357 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 21684818 21685080 21685024 Y OR10G2,OR4E2,OR10G3,RNASE8,OR5AU1 NA NA NA NA NA HNRNPC 50573 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 23449757 23450231 23450060 Y MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB,JUB HAUS4,C14orf93 NA NA NA NA AJUBA 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 27311220 27311475 27311345 Y NA NA NA NA NA NA RPL26P3 1645641 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 31732842 31733131 31732940 Y NA NA AP4S1,HEATR5A,HECTD1,STRN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HECTD1 57832 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 32597823 32598061 32597946 Y NUBPL NA NA NA NA NA ARHGAP5-AS1 53824 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 32953597 32954289 32954012 Y ARHGAP5,AKAP6,NPAS3 RP11-320M16.1 NA NA NA NA RP11-320M16.1 1591 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 34529400 34529785 34529476 Y EGLN3 NA EGLN3 K562,MCF7 ChIA-PET 22265404 SPTSSA 399777 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 35274619 35275001 35274810 Y PPP2R3C,BAZ1A NA NA NA NA NA RP11-73E17.2 66548 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 35628271 35628433 35628369 Y NA PPP2R3C,KIAA0391 NA NA NA NA KIAA0391 38516 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 36277376 36277519 36277444 Y NFKBIA,RALGAPA1 RALGAPA1,NUTF2P2,BRMS1L NA NA NA NA RALGAPA1 866 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 39559553 39559840 39559693 Y NA SEC23A,GEMIN2 NA NA NA NA SEC23A 17010 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 49375724 49376075 49375898 Y NA NA NA NA NA NA RPS29 687333 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 50329576 50329987 50329651 Y NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 11655 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 50334846 50335244 50334992 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 16925 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 50465888 50466432 50466066 Y NA NA NA NA NA NA ARF6 108078 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 51865642 51865984 51865869 Y FRMD6 NA LOC283553,FRMD6,FRMD6-AS1 IMR90 Hi-C 24141950 FRMD6 87834 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 52104818 52105424 52105148 Y NA NA NA NA NA NA FRMD6 151000 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 53269343 53269708 53269600 Y PTGER2 GNPNAT1 NA NA NA NA GNPNAT1 12957 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 55152891 55153126 55153104 Y SAMD4A NA NA NA NA NA SAMD4A 121076 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 55538737 55539349 55538846 Y FBXO34,FBXO34,ATG14,MAPK1IP1L WDHD1,SOCS4,MAPK1IP1L,LGALS3 NA NA NA NA MAPK1IP1L 22388 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 55569733 55570176 55570087 Y LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L LGALS3 LGALS3,DLGAP5,MAPK1IP1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LGALS3 18652 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 55596570 55597156 55596587 Y NA LGALS3 NA NA NA NA LGALS3 7742 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 56472041 56472329 56472134 Y NA NA PELI2 IMR90 Hi-C 24141950 PELI2 110203 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62026213 62026731 62026533 Y NA NA NA NA NA NA HIF1A 133500 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62032593 62032996 62032785 Y HIF1A NA NA NA NA NA HIF1A 127235 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62034641 62035051 62034719 Y HIF1A NA NA NA NA NA HIF1A 125180 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62052395 62052634 62052478 Y NA NA NA NA NA NA HIF1A 107597 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62052734 62053075 62053015 Y SYT16 NA NA NA NA NA HIF1A 107156 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 62061169 62061631 62061310 Y HIF1A NA NA NA NA NA HIF1A 98600 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62110411 62110684 62110506 Y HIF1A HIF1A,HIF1A-AS1 NA NA NA NA HIF1A 49547 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62298450 62298645 62298529 Y NA COX4I1P1 PRKCH,FLJ22447,HIF1A-AS2,HIF1A,SNAPC1 IMR90 Hi-C 24141950 COX4I1P1 1363 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 62454456 62454478 62454466 Y SYT16 NA SYT16 IMR90 Hi-C 24141950 COX4I1P1 157369 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 66104549 66104610 66104580 Y NA NA NA NA NA NA FUT8 229239 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 66126309 66126626 66126333 Y NA NA NA NA NA NA FUT8 250999 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 68555905 68556402 68556038 Y PIGH NA NA NA NA NA RAD51B 271409 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 68604521 68604895 68604639 Y NA NA NA NA NA NA RAD51B 320025 CAGE SK-OV-3-R hg19 FANTOM5 6.36738042696793 chr14 68607037 68607479 68607161 Y NA NA NA NA NA NA RAD51B 322541 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 68699331 68699744 68699520 Y ZFYVE26 NA NA NA NA NA RAD51B 414835 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 68717033 68717146 68717097 Y NA NA NA NA NA NA RAD51B 432537 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 68831089 68831428 68831316 Y NA NA NA NA NA NA CTD-2325P2.3 318854 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 69010932 69011443 69011159 Y NA NA NA NA NA NA CTD-2325P2.3 138839 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 69014304 69014714 69014453 Y ACTN1 NA NA NA NA NA CTD-2325P2.3 135568 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr14 69014972 69015327 69015083 Y ACTN1 NA NA NA NA NA CTD-2325P2.3 134955 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr14 69159987 69160257 69160134 Y NA CTD-2325P2.3 ZFP36L1,RAD51B IMR90 Hi-C 24141950 CTD-2325P2.3 9705 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 69161300 69161452 69161356 Y NA CTD-2325P2.3 ZFP36L1,RAD51B IMR90 Hi-C 24141950 CTD-2325P2.3 11018 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr14 69251306 69251504 69251405 Y NA ZFP36L1 NA NA NA NA ZFP36L1 9686 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 69281323 69281785 69281441 Y DCAF5 ZFP36L1 RAD51B,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L1 20133 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 69402735 69403079 69402843 Y GALNTL1 ACTN1 NA NA NA NA ACTN1 41078 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 73110081 73110359 73110171 Y NA NA RGS6,DPF3,DCAF4 IMR90 Hi-C 24141950 DPF3 248450 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 74949377 74949710 74949544 Y NA ISCA2,NPC2 NA NA NA NA ISCA2 8713 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 75084188 75084360 75084254 Y PGF,EIF2B2 CTD-2207P18.2 LTBP2,KIAA0317,FCF1,YLPM1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CTD-2207P18.2 2838 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 75086409 75086922 75086553 Y PGF CTD-2207P18.2 LTBP2,KIAA0317,FCF1,YLPM1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CTD-2207P18.2 5059 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 75592667 75593037 75593004 Y NA RP11-950C14.7,NEK9,TMED10 NA NA NA NA NEK9 620 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 75688633 75689211 75688968 Y DLST,FOS TMED10,RP11-293M10.2 PGF,NEK9,TMED10,FOS,LOC731223,BATF IMR90 Hi-C 24141950 RP11-293M10.2 34903 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 76334268 76334588 76334390 Y NA IFT43 NA NA NA NA IFT43 31891 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 77499482 77500543 77500476 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 6448 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 78393381 78393611 78393501 Y NA NA NA NA NA NA ADCK1 128955 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 78447305 78447552 78447446 Y NA NA NA NA NA NA ADCK1 182879 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 80857236 80857459 80857352 Y NA NA NA NA NA NA CEP128 566402 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 81220509 81220785 81220647 Y NA NA NA NA NA NA CEP128 203076 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 89257931 89258017 89257974 Y NA EML5,TTC8 NA NA NA NA EML5 835 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 89466992 89467193 89467101 Y FOXN3 NA EFCAB11,FOXN3,PRO1768,EML5,TTC8,LOC400236,TDP1 IMR90 Hi-C 24141950 TTC8 178495 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 92211789 92212017 92211903 Y ATXN3,SMEK1 NA NA NA NA NA SMEK1 236891 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 92997430 92998230 92997929 Y ATXN3,SLC24A4,SLC24A4,RIN3 RIN3 NA NA NA NA RIN3 19312 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 95385360 95385514 95385442 Y SERPINA5 NA NA NA NA NA DICER1 236833 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 95724003 95724377 95724190 Y DICER1,DICER1,CLMN NA NA NA NA NA CLMN 59866 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 99439262 99439638 99439565 Y NA NA NA NA NA NA SETD3 505578 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 101159258 101159870 101159708 Y NA NA NA NA NA NA WDR25 318503 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 102414226 102414964 102414565 Y NA DYNC1H1 NA NA NA NA DYNC1H1 13901 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 102971480 102971658 102971568 Y NA ANKRD9 NA NA NA NA ANKRD9 2478 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 103541337 103541574 103541446 Y NA CDC42BPB,TNFAIP2 CDC42BPB,EIF5 MCF7 ChIA-PET 22265404 CDC42BPB 19538 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 105144100 105144955 105144117 Y GPR132,AKT1 RP11-982M15.6,INF2,ADSSL1 NA NA NA NA RP11-982M15.6 528 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 105433766 105434012 105433864 Y KIAA0284,JAG2,AHNAK2 AHNAK2,C14orf79 PLD4 MCF7 ChIA-PET 22265404 AHNAK2 8682 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 105438668 105438757 105438725 Y KIAA0284,JAG2,CDCA4,C14orf79,AHNAK2 AHNAK2,C14orf79,CDCA4 NA NA NA NA AHNAK2 3937 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 105491233 105491512 105491453 Y NA AHNAK2,C14orf79,CDCA4 NA NA NA NA CDCA4 5748 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 105493379 105493756 105493698 Y NA C14orf79,CDCA4 NA NA NA NA CDCA4 7894 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr14 105500263 105500628 105500453 Y NA CDCA4 NA NA NA NA CDCA4 14778 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 105527058 105527513 105527190 Y PLD4,GPR132 CDCA4 NA NA NA NA CDCA4 41573 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr14 105948139 105949025 105948432 Y NA CRIP2,C14orf80 NA NA NA NA C14orf80 5167 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr15 32140399 32140767 32140585 Y NA NA NA NA NA NA KLF13 523341 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 32974763 32975144 32974961 Y NA NA NA NA NA NA ARHGAP11A 69418 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 33162710 33163027 33162926 Y NA NA NA NA NA NA ARHGAP11A 257365 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 33188603 33188636 33188634 Y NA NA NA NA NA NA ARHGAP11A 283258 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 34421770 34422050 34421910 Y NA PGBD4 NA NA NA NA PGBD4 29496 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 35384953 35385239 35385081 Y NA NA ATPBD4 IMR90 Hi-C 24141950 ZNF770 106465 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 35590731 35591134 35590845 Y NA NA ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466 IMR90 Hi-C 24141950 ZNF770 312243 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr15 40210900 40211252 40211013 Y GPR176 EIF2AK4 FSIP1 IMR90 Hi-C 24141950 GPR176 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 42228791 42229215 42228969 Y MGA,JMJD7,TMEM87A,EHD4 EHD4 NA NA NA NA EHD4 33561 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 43152474 43152861 43152772 Y STARD9,TTBK2 NA NA NA NA NA TTBK2 58146 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 43415014 43415563 43415337 Y NA UBR1,TMEM62 NA NA NA NA TMEM62 1537 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 50358473 50358749 50358576 Y NA NA NA NA NA NA CTD-2647E9.1 274030 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 52369278 52369628 52369325 Y MAPK6 CTD-2184D3.1 GNB5,BCL2L10,MYO5C IMR90 Hi-C 24141950 CTD-2184D3.1 15864 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 52395777 52396019 52395882 Y DMXL2,TMOD3,MAPK6 CTD-2184D3.1 NA NA NA NA CTD-2184D3.1 10285 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 52580530 52580869 52580787 Y ARPP19,MYO5C NA NA NA NA NA GNB5 98964 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 52796168 52796272 52796220 Y NA MYO5A NA NA NA NA MYO5A 22975 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 57814441 57814703 57814560 Y CGNL1 NA NA NA NA NA GCOM1 67403 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 57853638 57853874 57853726 Y NA GCOM1,MYZAP,POLR2M NA NA NA NA GCOM1 28232 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 57920264 57920408 57920336 Y NA GCOM1,MYZAP,POLR2M NA NA NA NA POLR2M 38033 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 59592534 59592835 59592690 Y BNIP2,RNF111,MYO1E NA NA NA NA NA FAM81A 70057 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 60757802 60757969 60757886 Y NA NARG2,RP11-219B17.1 NA NA NA NA NARG2 11390 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 62207321 62207567 62207441 Y NA NA NA NA NA NA VPS13C 143105 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr15 66707547 66707736 66707571 Y MAP2K1 TIPIN,MAP2K1 RPL4,SNAPC5 IMR90 Hi-C 24141950 MAP2K1 30392 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 67095524 67095803 67095671 Y NA NA NA NA NA NA SMAD6 102958 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 67134448 67134928 67134631 Y NA NA SMAD6,SNAPC5 IMR90 Hi-C 24141950 SMAD6 141882 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 67383217 67384219 67383746 Y SMAD3 SMAD3 NA NA NA NA SMAD3 29116 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 67426476 67426864 67426547 Y SMAD3 NA NA NA NA NA SMAD3 72375 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 67440675 67441024 67440815 Y SMAD3 NA NA NA NA NA SMAD3 86574 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 68132387 68132778 68132514 Y PIAS1 NA NA NA NA NA PIAS1 211739 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 68441418 68441688 68441529 Y NA NA NA NA NA NA PIAS1 96901 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 69948905 69949301 69949066 Y NA NA TLE3,C15orf50,LOC145837 IMR90 Hi-C 24141950 RPLP1 205782 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 71385768 71386181 71385996 Y NA NA NA NA NA NA THAP10 202644 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 72518614 72519346 72519221 Y ARIH1,PKM2 NA NA NA NA NA MYO9A 109696 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 74249257 74249448 74249278 Y NA LOXL1,STOML1,PML NA NA NA NA LOXL1 32927 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr15 74289381 74289564 74289454 Y PML STOML1,PML NA NA NA NA PML 4367 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 75959061 75959441 75959310 Y SNX33 SNUPN,SNX33,IMP3 NA NA NA NA IMP3 20014 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr15 78619959 78620089 78620013 Y DNAJA4 WDR61,CRABP1 WDR61,DNAJA4 IMR90 Hi-C 24141950 CRABP1 10577 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 79280826 79281229 79281127 Y CTSH CTSH NA NA NA NA CTSH 40910 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 80211506 80211893 80211588 Y NA MTHFS,C15ORF37,ST20,ST20-MTHFS,BCL2A1 NA NA NA NA C15ORF37 1614 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 83862328 83862648 83862488 Y NA HDGFRP3 NA NA NA NA HDGFRP3 12122 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 83954950 83955303 83955151 Y BNC1 NA NA NA NA NA HDGFRP3 80180 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr15 84040858 84041607 84041233 Y NA NA SH3GL3,BNC1 IMR90 Hi-C 24141950 SH3GL3 72373 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 85458286 85458507 85458420 Y NA NA NA NA NA NA PDE8A 63164 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 86211201 86211615 86211423 Y AKAP13,KLHL25 NA NA NA NA NA KLHL25 124646 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 89648424 89648609 89648517 Y NA ABHD2,HMGB1P8 NA NA NA NA ABHD2 19734 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 90649995 90650276 90650136 Y NA IDH2 NA NA NA NA IDH2 6259 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 90944087 90944636 90944284 Y FES,FES,FES,ZNF710,CIB1,C15orf58,CRTC3,IQGAP1 IQGAP1 NA NA NA NA IQGAP1 14637 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr15 91476522 91476977 91476740 Y NA MAN2A2,UNC45A,HDDC3,RCCD1 NA NA NA NA HDDC3 2723 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 93354824 93354998 93354897 Y CHD2 FAM174B NA NA NA NA FAM174B 3710 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 93363497 93364154 93363735 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 FAM174B ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 FAM174B 12383 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 93542371 93542660 93542397 Y NA NA NA NA NA NA CHD2 117845 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 99943673 99944058 99943986 Y NA NA NA NA NA NA MEF2A 71312 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr15 101741612 101741900 101741753 Y TM2D3,CHSY1 CHSY1 NA NA NA NA CHSY1 48237 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr15 102202329 102202647 102202484 Y OR4F15 TM2D3 NA NA NA NA TM2D3 11735 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 729341 729555 729445 Y NA C16orf13,FAM195A,AL022341.3,WDR90,RHOT2,STUB1,JMJD8,WDR24,METRN,FAM173A,HAGHL NA NA NA NA STUB1 1117 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 1519780 1519909 1519802 Y SEPX1,MAPK8IP3,CLCN7 C16orf91,CLCN7,TELO2 NA NA NA NA CLCN7 3672 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 2917931 2918273 2918246 Y NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 12914 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 3053798 3054225 3053960 Y NA PAQR4,PKMYT1,TNFRSF12A,THOC6,HCFC1R1 NA NA NA NA TNFRSF12A 12221 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 3285972 3286117 3286070 Y PRSS22,ZSCAN10,ZNF200,ZNF200,ZNF200,ZNF75A,ZNF263 ZNF200,MEFV,ZNF263 NA NA NA NA ZNF200 1751 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr16 4321625 4322178 4321908 Y ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4 TFAP4 NA NA NA NA TFAP4 549 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 4403644 4403691 4403668 Y CORO7 PAM16,VASN NA NA NA NA PAM16 36 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 4666118 4666710 4666381 Y NA MGRN1 NA NA NA NA MGRN1 1624 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 6353433 6353832 6353638 Y NA NA NA NA NA NA NAGPA 1271291 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 9162231 9162510 9162397 Y NA C16orf72 USP7,C16orf72 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C16orf72 20995 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 10953193 10953844 10953582 Y EMP2 NA CIITA IMR90 Hi-C 24141950 DEXI 80473 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 11308064 11308220 11308142 Y NA SOCS1 SOCS1,CLEC16A,PRM3,PRM2,TNP2,RMI2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS1 39816 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 12008398 12008797 12008598 Y NA GSPT1 NA NA NA NA GSPT1 459 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 15085192 15085402 15085309 Y C16orf45 PDXDC1 NTAN1 IMR90 Hi-C 24141950 PDXDC1 18744 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 15684514 15685137 15684868 Y NDE1,NDE1,KIAA0430 KIAA0430,NDE1 NA NA NA NA KIAA0430 49886 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 20913163 20913441 20913303 Y CRYM,DCUN1D3,LYRM1 LYRM1,ERI2,DCUN1D3 NA NA NA NA DCUN1D3 3457 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 22207042 22207397 22207176 Y NA EEF2K POLR3E,EEF2K,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 8206 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 23508487 23508934 23508786 Y GGA2 COG7,GGA2 NA NA NA NA GGA2 22382 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 25005690 25005854 25005767 Y NA ARHGAP17 NA NA NA NA ARHGAP17 19133 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 27254406 27254878 27254778 Y IL4R NSMCE1 NA NA NA NA NSMCE1 23237 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr16 27275592 27275718 27275658 Y NA NSMCE1,IL4R NA NA NA NA NSMCE1 2397 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 27338285 27338559 27338369 Y KIAA0556,IL4R IL4R NA NA NA NA IL4R 15296 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 29709853 29709969 29709906 Y QPRT QPRT NA NA NA NA QPRT 37253 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 30645556 30645885 30645776 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF689,PRR14 PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF689 12223 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr16 30876491 30876606 30876548 Y NA BCL7C NA NA NA NA BCL7C 27675 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 30885980 30886229 30886174 Y ZNF689,PHKG2,RNF40,C16orf93,ZNF668 BCL7C,FBXL19 NA NA NA NA BCL7C 18052 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 34973617 34973844 34973726 Y NA RNA5SP413 NA NA NA NA RNA5SP413 5559 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 34977722 34977881 34977830 Y NA RNA5SP413 NA NA NA NA RNA5SP413 1522 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr16 34979653 34980053 34979874 Y NA RNA5SP413 NA NA NA NA RNA5SP413 250 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 51670868 51671078 51670973 Y NA NA NA NA NA NA SALL1 487590 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 51795949 51796284 51796182 Y NA NA SALL1,CYLD,LOC388276 IMR90 Hi-C 24141950 SALL1 612671 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 51797343 51797505 51797414 Y NA NA SALL1,CYLD,LOC388276 IMR90 Hi-C 24141950 SALL1 614065 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 56406318 56406482 56406386 Y NA NA NA NA NA NA AMFR 50968 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 66416297 66416567 66416426 Y CDH5 BEAN1 NA NA NA NA BEAN1 42633 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 66587187 66587393 66587288 Y NA TK2,CKLF,CKLF-CMTM1,CMTM1,CMTM3 NA NA NA NA CKLF-CMTM1 2697 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 66960903 66961306 66961106 Y PLEKHG4,FHOD1,CBFB,RRAD CDH16,RRAD,FAM96B,CES2 NA NA NA NA RRAD 3356 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 67891676 67892114 67891889 Y RLTPR,ACD,PSMB10,NFATC3,EDC4,THAP11 THAP11,NUTF2,CENPT,EDC4,PSKH1 NA NA NA NA CENPT 11962 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 68320405 68320913 68320608 Y ZFP90,SMPD3 PLA2G15,SLC7A6,SLC7A6OS,PRMT7 NA NA NA NA SLC7A6OS 21936 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 69790577 69791500 69790768 Y PDF,NIP7,NOB1 NQO1,NOB1,WWP2 NA NA NA NA WWP2 2709 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr16 70444676 70444732 70444694 Y NA ST3GAL2,FUK NA NA NA NA ST3GAL2 26408 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 70980057 70980287 70980181 Y NA NA NA NA NA NA VAC14 146993 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 71046758 71046771 71046763 Y NA NA NA NA NA NA VAC14 213694 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 71931018 71931097 71931057 Y DHX38,ATXN1L,KIAA0174 NA NA NA NA NA IST1 53119 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 73053285 73053647 73053466 Y NA ZFHX3 NA NA NA NA ZFHX3 37950 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 73102477 73102709 73102578 Y ZFHX3 ZFHX3 ZFHX3,HTA IMR90 Hi-C 24141950 ZFHX3 10880 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 75278988 75279894 75279594 Y CHST6,FA2H,BCAR1,BCAR1,BCAR1,BCAR1,BCAR1 BCAR1 NA NA NA NA BCAR1 20057 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 77322301 77322413 77322334 Y NA NA NA NA NA NA MON1B 99569 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 80838768 80839127 80839024 Y CENPN,C16orf61,ATMIN,CDYL2 CDYL2 NA NA NA NA CDYL2 2542 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 82258481 82258742 82258556 Y NA NA PLCG2,SDR42E1,HSD17B2 IMR90 Hi-C 24141950 MPHOSPH6 56650 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 82661526 82661961 82661896 Y CDH13 CDH13 NA NA NA NA CDH13 3118 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 82686651 82686853 82686732 Y NA CDH13 HSBP1 IMR90 Hi-C 24141950 CDH13 28243 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 83069400 83069774 83069647 Y NA NA NA NA NA NA CDH13 410992 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 85471045 85471389 85471119 Y NA NA KIAA0182,LOC400548,FAM92B,LINC00311,LOC727710,GINS2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GINS2 250290 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 86698129 86698417 86698281 Y NA NA FOXL1,FLJ30679,MTHFSD,FOXC2,C16orf95,FBXO31 IMR90 Hi-C 24141950 MTHFSD 111288 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 86698644 86698785 86698699 Y FOXL1 NA FOXL1,C16orf95,MTHFSD,FLJ30679,FOXC2 IMR90 Hi-C 24141950 MTHFSD 111803 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 89242675 89243011 89242708 Y NA ZNF778 NA NA NA NA ZNF778 39107 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 89268043 89268411 89268231 Y NA ZNF778 NA NA NA NA ZNF778 13707 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr16 89313669 89314138 89313993 Y ZNF276,ZNF778 ZNF778 NA NA NA NA ZNF778 31551 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr16 89382240 89382290 89382256 Y ZNF276,ZNF276,SPATA2L,ANKRD11,ZNF778 NA NA NA NA NA ZNF778 100122 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr16 89392350 89392997 89392648 Y NA NA NA NA NA NA ZNF778 110232 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 1391218 1391783 1391434 Y NA CRK,MYO1C,INPP5K NA NA NA NA MYO1C 2323 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 1974774 1975359 1974921 Y SCARF1,HIC1,HIC1 DPH1,OVCA2,HIC1 NA NA NA NA HIC1 19326 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 2143435 2143643 2143533 Y HIC1,HIC1 NA NA NA NA NA SRR 61034 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 2627618 2628097 2628087 Y NA NA NA NA NA NA PAFAH1B1 133114 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 3641791 3642428 3642283 Y ITGAE,ATP2A3 GSG2 NA NA NA NA GSG2 16580 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 3694919 3695190 3695001 Y CTNS,ZZEF1,P2RX1 ITGAE NA NA NA NA ITGAE 7347 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 5736283 5736492 5736391 Y NA NA NA NA NA NA DERL2 348152 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 6656419 6656747 6656461 Y RNASEK,GABARAP,XAF1 NA NA NA NA NA TEKT1 76333 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 7745915 7746944 7746139 Y NA CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 12120 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr17 7746991 7747556 7747325 Y POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B CYB5D1,CHD3,LSMD1 NA NA NA NA CYB5D1 11508 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 8241756 8242007 8241881 Y KDM6B,PER1,NDEL1 SLC25A35,RPL26 NA NA NA NA RPL26 42524 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 13288916 13289223 13288974 Y NA NA HS3ST3A1 IMR90 Hi-C 24141950 HS3ST3A1 214021 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 13445928 13446299 13446210 Y NA NA NA NA NA NA HS3ST3A1 56945 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 13447669 13448094 13447771 Y HS3ST3A1 NA NA NA NA NA HS3ST3A1 55150 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 13460367 13460669 13460622 Y HS3ST3A1 HS3ST3A1 NA NA NA NA HS3ST3A1 42575 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 13575065 13575361 13575332 Y NA NA NA NA NA NA HS3ST3A1 71821 CAGE SK-OV-3-R hg19 FANTOM5 6.36738042696793 chr17 16275124 16275367 16275237 Y NA CENPV,UBB NA NA NA NA UBB 6745 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 17655489 17655938 17655636 Y DRG2,ALKBH5,COPS3,MED9 NA NA NA NA NA RAI1 72702 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 21189600 21190105 21189864 Y MAP2K3,MAP2K3 MAP2K3 NA NA NA NA MAP2K3 3616 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 25409900 25410125 25410078 Y NA NA NA NA NA NA WSB1 208977 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 25558342 25558695 25558519 Y NA NA KSR1,WSB1 IMR90 Hi-C 24141950 WSB1 60407 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 25680632 25681097 25680982 Y NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 61530 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 25858732 25858982 25858838 Y NA NA NA NA NA NA KSR1 77062 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 27482450 27482602 27482543 Y NA MYO18A NA NA NA NA MYO18A 22828 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 27619094 27619880 27619581 Y TAOK1 NA NA NA NA NA NUFIP2 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 28049478 28050072 28049903 Y NUFIP2,TAOK1,SSH2 NA NA NA NA NA CORO6 101553 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 29423002 29423667 29423241 Y NA NF1 NA NA NA NA NF1 3057 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 29876692 29877391 29877039 Y NA NA NA NA NA NA EVI2A 229790 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 30726822 30727202 30727012 Y NA PSMD11 NA NA NA NA PSMD11 42077 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 33414530 33415581 33415167 Y SLFN5,ZNF830,RFFL RFFL,RAD51D NA NA NA NA RFFL 192 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 33572314 33572864 33572356 Y NA SLFN5 NA NA NA NA SLFN5 4259 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 34871446 34871455 34871448 Y NA ZNHIT3,PIGW,MYO19,GGNBP2 NA NA NA NA PIGW 17392 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 35292129 35292558 35292512 Y ACACA,LHX1,AATF RP11-445F12.1,AATF NA NA NA NA RP11-445F12.1 169 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 35296825 35297078 35296886 Y LHX1 RP11-445F12.1,AATF NA NA NA NA RP11-445F12.1 4865 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 36103612 36103841 36103732 Y HNF1B HNF1B NA NA NA NA HNF1B 375 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 37558786 37559227 37559071 Y NA FBXL20,MED1 NA NA NA NA FBXL20 2010 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 37832582 37832871 37832624 Y NA STARD3,TCAP,ERBB2,PGAP3 NA NA NA NA ERBB2 9296 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 37896808 37897181 37897022 Y GRB7,GRB7,GRB7,GRB7 PGAP3,MIEN1,GRB7 NA NA NA NA GRB7 4628 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 37910411 37911394 37910787 Y FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3 MIEN1,GRB7 NA NA NA NA GRB7 18231 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 38464298 38464708 38464402 Y MSL1,WIPF2,RARA,RARA CDC6,RARA NA NA NA NA RARA 854 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 39656265 39656585 39656468 Y KRTAP2-1,KRTAP2-2,KRTAP2-4,KRTAP9-1,KRTAP9-2,KRTAP9-9,KRT37 KRT19 NA NA NA NA KRT19 25975 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 39822130 39822941 39822323 Y NA EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 20196 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 40942176 40942529 40942199 Y NA EZH1,VPS25,PSME3,BECN1 NA NA NA NA VPS25 18722 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 42634020 42634172 42634095 Y TMUB2,TMUB2,GRN,FZD2 FZD2 NA NA NA NA FZD2 1095 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 42919802 42920006 42919936 Y NA GJC1 NA NA NA NA GJC1 13618 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 43201428 43201633 43201517 Y NA ACBD4,PLCD3,HEXIM1,HEXIM2 NA NA NA NA ACBD4 6334 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 43305165 43306978 43306453 Y PLEKHM1,ARHGAP27,FMNL1 FMNL1 NA NA NA NA FMNL1 8354 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 44848812 44849347 44849259 Y NA NA NA NA NA NA RPS7P11 51279 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 45302836 45303175 45303013 Y NA CDC27,ITGB3 NA NA NA NA ITGB3 26088 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 45317390 45317724 45317566 Y TBKBP1 ITGB3 NA NA NA NA ITGB3 11539 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 45343380 45343597 45343479 Y TBKBP1 ITGB3 NA NA NA NA ITGB3 14117 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 45356357 45357027 45356891 Y NA ITGB3 NA NA NA NA ITGB3 27094 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 45609469 45609601 45609554 Y NA NPEPPS NA NA NA NA NPEPPS 11161 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 46205987 46206223 46206201 Y TBX21,OSBPL7,MRPL10,SKAP1 CBX1,SNX11 NA NA NA NA SNX11 27268 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 46289129 46289412 46289274 Y NA NA NA NA NA NA SNX11 110410 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 46583139 46583523 46583310 Y SKAP1 HOXB-AS1,HOXB2,HOXB-AS3 HOXB2,HOXB3,HOXB4,SKAP1,HOXB8,HOXB1,HOXB9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HOXB-AS1 35390 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 46654606 46654947 46654902 Y NA HOXB-AS1,HOXB2,HOXB-AS3,HOXB4,HOXB5,HOXB3,HOXB6,HOXB8,HOXB9 NA NA NA NA HOXB4 526 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 46662684 46663231 46662943 Y HOXB2,HOXB3,HOXB4,HOXB9,HOXB8,HOXB7,HOXB6,HOXB5 HOXB-AS1,HOXB2,HOXB-AS3,HOXB4,HOXB5,HOXB3,HOXB6,HOXB8,HOXB9,HOXB7 NA NA NA NA HOXB5 6092 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 47270202 47270509 47270359 Y CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3 PHOSPHO1 NA NA NA NA PHOSPHO1 35619 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 48105016 48105270 48105136 Y XYLT2,LRRC59,ITGA3 ITGA3 LOC284080,ITGA3 MCF7 ChIA-PET 22265404 ITGA3 26062 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 53494121 53494283 53494202 Y NA MMD NA NA NA NA MMD 3070 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 53654184 53654435 53654393 Y NA NA PCTP IMR90 Hi-C 24141950 MMD 156831 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 55477911 55478459 55478198 Y NA NA NA NA NA NA MSI2 146699 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 55860194 55860305 55860223 Y NA NA MSI2,AKAP1 IMR90 Hi-C 24141950 MRPS23 65112 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 56012688 56013140 56012704 Y NA CUEDC1 VEZF1,SRSF1,CUEDC1 IMR90 Hi-C 24141950 CUEDC1 17544 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 56138078 56138257 56138212 Y NA DYNLL2 AKAP1,DYNLL2,MRPS23,VEZF1,SRSF1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DYNLL2 20519 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 57831888 57832338 57832062 Y VMP1,RNFT1 VMP1,PTRH2 NA NA NA NA PTRH2 48901 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 57839956 57840355 57840071 Y RNFT1 NA NA NA NA NA PTRH2 56969 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 57841314 57841767 57841379 Y NA NA NA NA NA NA PTRH2 58327 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr17 57861698 57862055 57862024 Y RNFT1 NA NA NA NA NA MIR21 54572 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 57863159 57864676 57863979 Y NA NA NA NA NA NA MIR21 51951 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr17 57882537 57882682 57882623 Y YPEL2,VMP1,RNFT1 MIR21 NA NA NA NA MIR21 33945 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 57904186 57904344 57904253 Y VMP1,CA4 MIR21 NA NA NA NA MIR21 12283 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 57906379 57907270 57906882 Y RNFT1 MIR21 NA NA NA NA MIR21 9357 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 60877951 60878269 60878188 Y NA NA NA NA NA NA MRC2 175189 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 61370802 61371122 61370929 Y MAP3K3,LIMD2 NA MIR548W IMR90 Hi-C 24141950 CYB561 150617 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 63119249 63119621 63119552 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 68292 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 63639930 63640399 63640359 Y NA NA NA NA NA NA CEP112 545803 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 63646847 63647018 63646933 Y NA NA NA NA NA NA CEP112 539184 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 64194072 64194322 64194164 Y NA CEP112 NA NA NA NA CEP112 7870 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 64961597 64961937 64961768 Y CACNG4 CACNG4 NA NA NA NA CACNG4 2571 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 66016045 66016315 66016119 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 13320 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 68284696 68285165 68284865 Y KCNJ2 NA MAP2K6 IMR90 Hi-C 24141950 MAP2K6 875857 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 70403681 70403886 70403813 Y SOX9 NA NA NA NA NA RPL32P33 217484 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 70417215 70417683 70417549 Y SOX9 NA NA NA NA NA RPL32P33 203687 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 70461830 70461987 70461862 Y NA NA NA NA NA NA RPL32P33 159383 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 71338137 71338558 71338458 Y NA CDC42EP4 NA NA NA NA CDC42EP4 31823 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 73333353 73333637 73333600 Y H3F3B,GRB2,GRB2,GGA3 SLC25A19 NA NA NA NA SLC25A19 49762 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 73426423 73426691 73426652 Y MRPS7 GRB2,KIAA0195 NA NA NA NA KIAA0195 8549 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 73891396 73891618 73891569 Y NA WBP2,TRIM47,TRIM65,MRPL38,FBF1 NA NA NA NA TRIM65 312 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 74255513 74255743 74255629 Y NA RNF157 NA NA NA NA RNF157 21059 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 74368264 74368743 74368490 Y SPHK1,SPHK1 SPHK1,PRPSAP1 NA NA NA NA SPHK1 1922 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 75120383 75120864 75120582 Y JMJD6,SEC14L1,SEC14L1,SEPT9,SEPT9,SEC14L1,SEC14L1 LINC00338,SEC14L1 NA NA NA NA LINC00338,SEC14L1 39585 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 75281811 75282557 75281917 Y SEPT9 NA NA NA NA NA LINC00338,SEC14L1 201013 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 75282703 75283463 75282995 Y SEPT9,SEPT9 NA NA NA NA NA LINC00338,SEC14L1 201905 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 75319028 75319523 75319372 Y SEPT9 NA NA NA NA NA LINC00338,SEC14L1 238230 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr17 75319670 75320031 75319742 Y MGAT5B,SEPT9,SEPT9 NA NA NA NA NA LINC00338,SEC14L1 238872 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 75954393 75954796 75954614 Y NA RNU1-80P TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNU1-80P 40213 CAGE SK-OV-3-R hg19 FANTOM5 6.36738042696793 chr17 76529146 76529333 76529216 Y USP36,CYTH1,SOCS3,PGS1 RN7SL454P NA NA NA NA RN7SL454P 2009 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 76564130 76564337 76564280 Y SOCS3,PGS1,USP36,CYTH1 RN7SL454P NA NA NA NA RN7SL454P 36993 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 78747875 78748340 78748187 Y NA NA NA NA NA NA CHMP6 215058 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 79024187 79024380 79024262 Y BAIAP2 BAIAP2 NA NA NA NA BAIAP2 17239 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr17 80056613 80056910 80056718 Y C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN RFNG,DUS1L,FASN NA NA NA NA FASN 2405 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 2605641 2605936 2605854 Y NA METTL4,NDC80,SMCHD1 NA NA NA NA NDC80 36131 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 3594733 3596177 3595596 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 185127 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr18 3623872 3624258 3624140 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 214266 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr18 3624338 3624601 3624482 Y TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 214732 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr18 3624841 3625119 3625035 Y MYL12A,MYL12B,MYL12B,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1 NA NA NA NA NA TGIF1 215235 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr18 3625326 3625427 3625380 Y NA NA NA NA NA NA TGIF1 215720 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 4760237 4760442 4760340 Y NA NA NA NA NA NA TGIF1 1350631 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 9094792 9095105 9094897 Y ANKRD12,ANKRD12 NDUFV2,ANKRD12 RALBP1,TWSG1,NDUFV2,CCDC165,ANKRD12 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDUFV2 5523 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 9554563 9554587 9554575 Y NA NA NA NA NA NA PPP4R1 58651 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 9643596 9643835 9643765 Y NA PPP4R1 PPP4R1,VAPA,ANKRD12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PPP4R1 30358 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 10766591 10766813 10766750 Y NA NA NA NA NA NA NAPG 242689 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 11005597 11005922 11005792 Y NA NA NA NA NA NA NAPG 481695 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 11849903 11850727 11850169 Y MPPE1,CHMP1B CHMP1B NA NA NA NA CHMP1B 508 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 11859926 11860218 11860181 Y CHMP1B CHMP1B,MPPE1 NA NA NA NA CHMP1B 10531 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 20138967 20139156 20139093 Y GATA6 NA CTAGE1,GATA6 IMR90 Hi-C 24141950 RBBP8 237068 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 20285220 20285560 20285371 Y NA NA GATA6,CABLES1 IMR90 Hi-C 24141950 RBBP8 90664 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 21165246 21165762 21165429 Y C18orf8,NPC1 NPC1 NA NA NA NA NPC1 384 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 21417655 21417852 21417722 Y NPC1,LAMA3 NA NA NA NA NA LAMA3 150248 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr18 25645418 25645770 25645581 Y CDH2 NA NA NA NA NA CDH2 109640 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr18 25695112 25695346 25695270 Y CDH2 NA NA NA NA NA CDH2 60064 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr18 29092491 29092685 29092630 Y DSC3,DSC2,DSG1,DSG2 DSG2 NA NA NA NA DSG2 16485 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 32671998 32672517 32672048 Y MAPRE2,MAPRE2,ZNF397,ZNF24 NA NA NA NA NA MAPRE2 117106 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 42305633 42305950 42305768 Y SETBP1 NA NA NA NA NA SLC14A1 996142 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 43381768 43381900 43381886 Y NA SIGLEC15 EPG5,SLC14A2,SLC14A1,SIGLEC15 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SIGLEC15 21577 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr18 44392877 44393138 44393020 Y NA NA NA NA NA NA PIAS2 104985 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 45529364 45529594 45529519 Y NA NA SMAD2,ZBTB7C IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD2 73849 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr18 46478230 46479206 46479122 Y SMAD7,SMAD7 SMAD7 NA NA NA NA SMAD7 3149 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr18 46502180 46502412 46502333 Y SMAD7 SMAD7 SMAD7,CTIF MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SMAD7 27099 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 46523478 46523814 46523611 Y SMAD7,SMAD7 SMAD7 CTIF,SMAD7,DYM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD7 48397 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 46524155 46524830 46524741 Y NA SMAD7 CTIF,SMAD7,DYM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMAD7 49074 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 47216686 47217049 47216797 Y NA NA MYO5B IMR90 Hi-C 24141950 LIPG 131617 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 47834587 47834811 47834691 Y NA CCDC11,MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 21913 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 48462357 48462700 48462360 Y ME2 ELAC1,SMAD4 NA NA NA NA ELAC1 29661 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 53167517 53167871 53167822 Y TCF4 NA NA NA NA NA TCF4 162147 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 54439234 54439547 54439439 Y WDR7 NA NA NA NA NA TXNL1 122403 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 55880754 55881007 55880894 Y MALT1 NA NA NA NA NA NEDD4L 171155 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr18 56188664 56188776 56188720 Y NEDD4L NA NA NA NA NA SNORD28 77087 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 56193191 56193601 56193321 Y MALT1 NA NA NA NA NA SNORD28 72262 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 56516862 56517001 56516932 Y NA NA ZNF532 MCF7 ChIA-PET 22265404 MALT1 180244 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 57482239 57482409 57482315 Y NA NA CCBE1 IMR90 Hi-C 24141950 RPS26P54 55449 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 61033511 61033750 61033687 Y NA BCL2,KDSR NA NA NA NA KDSR 768 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 65869714 65869805 65869780 Y NA NA NA NA NA NA CCDC102B 510641 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 65945074 65945279 65945262 Y NA NA LOC643542 IMR90 Hi-C 24141950 CCDC102B 435167 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 67683360 67683665 67683513 Y NA NA NA NA NA NA RTTN 187516 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 74556264 74556608 74556436 Y NA ZNF236 NA NA NA NA ZNF236 23701 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 74774000 74774964 74774473 Y MBP NA NA NA NA NA ZNF236 241437 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 74779066 74780013 74779875 Y MBP NA NA NA NA NA ZNF236 246503 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr18 77153646 77154504 77153944 Y ATP9B,NFATC1,NFATC1 NA NA NA NA NA NFATC1 0 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr18 77283764 77284286 77283852 Y ATP9B,NFATC1,CTDP1 NA NA NA NA NA NFATC1 129908 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 290136 290651 290316 Y RNF126,GZMM,C19orf21,PPAP2C,PPAP2C PPAP2C NA NA NA NA PPAP2C 743 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 342831 343179 342882 Y MIER2 MIER2 NA NA NA NA MIER2 33 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 782330 783005 782707 Y NA PTBP1,MIR4745 NA NA NA NA PTBP1 12070 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 1085284 1085426 1085350 Y C19orf22,ARID3A,ABCA7,MIDN,CIRBP,HMHA1,SBNO2,SBNO2 ABCA7,POLR2E,GPX4 NA NA NA NA POLR2E 8172 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 2061356 2061737 2061654 Y SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A BTBD2,MKNK2,MOB3A NA NA NA NA MKNK2 12113 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 2503555 2504136 2503623 Y DOT1L,GADD45B LMNB2,GADD45B NA NA NA NA GADD45B 29435 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 2627989 2628256 2628036 Y DOT1L,GADD45B NA NA NA NA NA SLC39A3 109894 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 4123124 4123351 4123249 Y MATK,ZFR2,ATCAY MAP2K2 NA NA NA NA MAP2K2 998 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 6056849 6057757 6057360 Y DENND1C,SAFB2,SAFB,VMAC,RFX2 NA NA NA NA NA RANBP3 80696 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 6076501 6076965 6076757 Y NA NA NA NA NA NA RANBP3 100348 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr19 6108978 6109271 6109224 Y NA NA NA NA NA NA RFX2 88312 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 6189136 6189412 6189274 Y NA RFX2 NA NA NA NA RFX2 8171 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 6577471 6577956 6577654 Y DENND1C,TNFSF9,ZNF557,CD70 TNFSF9,CD70 NA NA NA NA CD70 24158 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 6579838 6580006 6579922 Y NA CD70 NA NA NA NA CD70 22108 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 6802447 6802718 6802569 Y DENND1C,TNFSF9,TNFSF14,EMR1,GPR108,VAV1 NA NA NA NA NA TRIP10 66511 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 10024468 10024837 10024779 Y OLFM2 NA PIN1 K562,MCF7 ChIA-PET 22265404 PIN1 80535 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 11202212 11202837 11202668 Y ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR LDLR NA NA NA NA LDLR 4174 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 11202963 11203178 11203054 Y ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR LDLR NA NA NA NA LDLR 4925 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 11269215 11269426 11269321 Y SMARCA4,SMARCA4,C19orf39 SPC24,KANK2 NA NA NA NA SPC24 4731 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 12404552 12404928 12404719 Y ZNF791,ZNF564,ZNF490,WDR83,JUNB,ZNF700,ZNF763,ZNF136,ZNF799,ZNF443,ZNF563,ZNF44 ZNF44 NA NA NA NA ZNF44 850 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 12888910 12889352 12889266 Y NA C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 10958 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 12892961 12894040 12893343 Y ZNF44,ZNF564,ZNF791,MAN2B1,C19orf43,DNASE2,JUNB C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 6270 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 12894545 12895330 12894818 Y ZNF44,ZNF791,MAN2B1,C19orf43,DNASE2,JUNB ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 4980 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 12895349 12896178 12895559 Y ZNF563,JUNB ASNA1,JUNB,PRDX2,RNASEH2A NA NA NA NA JUNB 4132 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 12899457 12901460 12900777 Y NA PRDX2,RNASEH2A NA NA NA NA JUNB 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 13957204 13959386 13957586 Y NA NA NA NA NA NA CC2D1A 55628 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr19 14545997 14546246 14546106 Y NA DDX39A,PKN1 NA NA NA NA PKN1 4132 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 14616908 14617174 14617017 Y GIPC1 GIPC1,TECR,DNAJB1 GIPC1 MCF7 ChIA-PET 22265404 TECR 8723 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 14664309 14664503 14664361 Y OR7C2 TECR,DNAJB1,NDUFB7 NA NA NA NA NDUFB7 16371 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 14732511 14733275 14733016 Y SYDE1 NA NA NA NA NA NDUFB7 51637 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr19 14783026 14783447 14783388 Y CD97,PKN1,ZNF333,EMR3 ZNF333 NA NA NA NA ZNF333 15166 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 15974006 15974442 15974280 Y NA UCA1 NA NA NA NA UCA1 36235 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 17218539 17219391 17218963 Y MED26,HAUS8,MYO9B HAUS8,MYO9B NA NA NA NA MYO9B 33948 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 18526337 18526644 18526408 Y CCDC124,IFI30,KLHL26,CRLF1,C19orf60,C19orf50,SSBP4 SSBP4 NA NA NA NA SSBP4 1030 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 20615031 20615448 20615259 Y NA NA NA NA NA NA ZNF737 131167 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 23530488 23530791 23530760 Y NA ZNF91 NA NA NA NA ZNF91 45571 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 23732304 23732710 23732386 Y NA NA NA NA NA NA ZNF675 135312 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr19 23971294 23971621 23971458 Y NA ZNF681,RPSAP58 NA NA NA NA RPSAP58 27487 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 29109267 29109431 29109349 Y NA NA NA NA NA NA UQCRFS1 593017 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 31618240 31618367 31618270 Y NA NA TSHZ3 IMR90 Hi-C 24141950 URI1 1205689 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 36618643 36619171 36618835 Y NA TBCB,POLR2I,CAPNS1 NA NA NA NA CAPNS1 9306 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 36648389 36648571 36648491 Y NA TBCB,POLR2I,CAPNS1 NA NA NA NA CAPNS1 19912 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 36720266 36720641 36720459 Y ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF382,ZNF260,ZFP14,ZNF565,ZNF565 ZNF146,ZNF565 NA NA NA NA ZNF565 14518 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 36757480 36757645 36757542 Y NA ZNF565 ZNF146 IMR90 Hi-C 24141950 ZNF565 22321 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 37246589 37246720 37246657 Y NA ZNF850 NA NA NA NA ZNF850 15007 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 37795242 37795359 37795301 Y ZNF790,ZNF345,ZNF345,ZNF345,ZNF829,ZNF568,ZNF420,ZNF585B,ZNF793,ZNF781,ZNF607,ZNF607,ZNF573,ZNF570,ZNF569,ZNF540,ZNF527,HKR1 HKR1 NA NA NA NA HKR1 6380 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr19 37822125 37822150 37822138 Y NA HKR1,ZNF527 NA NA NA NA HKR1 20386 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 38490005 38490506 38490269 Y YIF1B,YIF1B,SPRED3,PSMD8,SIPA1L3 NA NA NA NA NA SIPA1L3 94137 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 38493976 38494435 38494152 Y YIF1B,YIF1B,SPRED3,PSMD8,SIPA1L3 NA NA NA NA NA SIPA1L3 98108 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 38526416 38526577 38526519 Y NA NA NA NA NA NA SIPA1L3 130548 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 39148533 39148920 39148613 Y C19orf33,FAM98C,PAPL,ACTN4 EIF3K,ACTN4 NA NA NA NA ACTN4 12244 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 39175000 39175365 39175141 Y NFKBIB,HNRNPL,EIF3K ACTN4 NA NA NA NA ACTN4 38711 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 39411140 39411539 39411467 Y LGALS7 NFKBIB,SIRT2,MRPS12,SARS2 NA NA NA NA MRPS12 7649 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 40042107 40042358 40042233 Y NA EID2B,EID2 DLL3,EID2,LGALS17A IMR90 Hi-C 24141950 EID2 13237 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 40543471 40543758 40543711 Y SPTBN4,ZNF546,ZNF780B ZNF780B NA NA NA NA ZNF780B 16358 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 41729438 41729579 41729517 Y ATP5SL,ATP5SL,AXL AXL,HNRNPUL1 NA NA NA NA AXL 6330 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 41803374 41803837 41803699 Y B9D2,HNRNPUL1 HNRNPUL1,CCDC97 NA NA NA NA CCDC97 10257 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 41819266 41819494 41819482 Y NA CCDC97,TMEM91,TGFB1,B9D2 NA NA NA NA CCDC97 5172 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 42772295 42772768 42772477 Y NA ZNF526,GSK3A,ERF,PRR19,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 14986 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 43355116 43355369 43355287 Y NA PSG1 NA NA NA NA PSG1 26605 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 43835548 43835842 43835742 Y NA NA TEX101 IMR90 Hi-C 24141950 PSG5 146860 CAGE SK-OV-3-R hg19 FANTOM5 30.9272763595585 chr19 45953262 45953678 45953446 Y GIPR,RELB,CLASRP,BLOC1S3,PPM1N,FOSB CD3EAP,PPP1R13L,FOSB,ERCC1 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 15575 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 45953764 45954783 45954182 Y NA CD3EAP,PPP1R13L,FOSB,ERCC1 FOSB,VASP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSB 14470 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 46683956 46684315 46684191 Y NA NA NA NA NA NA IGFL3 58025 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 46708652 46708841 46708747 Y NA NA NA NA NA NA IGFL3 82721 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 47363167 47364689 47363471 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562 ChIA-PET 22265404 AP2S1 10918 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 47458912 47459233 47458939 Y ZC3H4,CCDC9 NA NPAS1 IMR90 Hi-C 24141950 NPAS1 61844 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 47776748 47776969 47776841 Y GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1 BBC3,CCDC9 NA NA NA NA CCDC9 19511 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 49524183 49524468 49524237 Y CGB5 GYS1,RUVBL2,CGB5 NA NA NA NA CGB5 20673 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 52192085 52192767 52192400 Y ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577 NA NA NA NA NA ZNF175 119534 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 52267467 52267945 52267800 Y ZNF350,SIGLEC10,FPR1,FPR2,FPR2 NA NA NA NA NA ZNF577 124258 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 52586676 52587051 52586863 Y NA ZNF841 NA NA NA NA ZNF841 9967 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 53128477 53128840 53128754 Y NA NA NA NA NA NA ZNF83 62909 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 53444729 53445104 53444918 Y ZNF765,ZNF761,ZNF665,ZNF347,ZNF347,ZNF160,ZNF808,ZNF701,ZNF701,ZNF83,ZNF816 ZNF320,ZNF816-ZNF321P,ZNF321P,ZNF816 NA NA NA NA ZNF816-ZNF321P 875 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 53727403 53727861 53727738 Y NA ZNF665,ZNF677 NA NA NA NA ZNF677 28290 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 54538982 54539278 54539125 Y NA NA NA NA NA NA OSCAR 64722 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 55370952 55371292 55371014 Y TMEM150B,PPP1R12C,LAIR1,LENG8,LAIR2,LILRA2,LILRA1,LILRB1,LILRB1,LILRB4,KIR3DL3,KIR2DS4,FCAR NA NA NA NA NA RDH13 209367 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 55983917 55984059 55984005 Y RDH13,HSPBP1,ISOC2 ISOC2,ZNF628,NAT14 ZNF628,ISOC2 K562,MCF7 ChIA-PET 22265404 ZNF628 1640 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 55985101 55985287 55985184 Y ISOC2,SSC5D ISOC2,ZNF628,NAT14 NA NA NA NA ZNF628 412 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 56116208 56117068 56116734 Y NA ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2 NA NA NA NA FIZ1 4872 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr19 56698517 56698525 56698522 Y NA NA NA NA NA NA ZNF444 56549 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 56807694 56808027 56807709 Y NLRP13,ZSCAN5A NA NA NA NA NA ZNF542 69441 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 58532436 58532530 58532517 Y NA CTD-2368P22.1,ZNF606,ZSCAN1,ZNF135 NA NA NA NA ZSCAN1 10870 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr19 58557282 58557656 58557471 Y NA CTD-2368P22.1,ZNF606,ZSCAN1,ZNF135 NA NA NA NA ZNF135 10951 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 628526 628919 628630 Y NA TMEM18 FAM150B IMR90 Hi-C 24141950 TMEM18 46520 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 1424847 1425347 1424968 Y TPO,TPO NA NA NA NA NA PXDN 321277 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 1722150 1722351 1722236 Y NA PXDN NA NA NA NA PXDN 24273 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 8773908 8774094 8774001 Y NA ID2 LINC00299,LOC339788,LOC100506274,ID2 IMR90 Hi-C 24141950 ID2 42881 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 9427801 9428115 9428020 Y YWHAQ,ITGB1BP1,ASAP2 NA NA NA NA NA ASAP2 82907 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 9815627 9815977 9815711 Y NA YWHAQ NA NA NA NA YWHAQ 46484 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 15199994 15200355 15200088 Y NA NA NA NA NA NA FAM84A 429184 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 19811541 19811934 19811810 Y NA NA NA NA NA NA TTC32 287813 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 19985229 19985530 19985434 Y NA NA NA NA NA NA TTC32 114217 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 20435780 20436055 20435965 Y SDC1,SDC1 SDC1 NA NA NA NA SDC1 12586 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 23609943 23610311 23610250 Y KLHL29 KLHL29 NA NA NA NA KLHL29 3855 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 25514055 25514238 25514170 Y NA DNMT3A NA NA NA NA DNMT3A 49221 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 28844259 28844848 28844625 Y FOSL2,TRMT61B,PPP1CB,PPP1CB NA NA NA NA NA PPP1CB 127658 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 30887906 30888094 30887998 Y NA NA NA NA NA NA LCLAT1 219814 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr2 36584242 36585529 36584872 Y FEZ2,CRIM1 CRIM1 NA NA NA NA CRIM1 3173 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 36790527 36791707 36791646 Y NA NA NA NA NA NA FEZ2 79523 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 37139828 37140219 37140054 Y NA NA NA NA NA NA STRN 51396 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 37789550 37789826 37789587 Y EIF2AK2,CDC42EP3 NA CDC42EP3,QPCT IMR90 Hi-C 24141950 CDC42EP3 173785 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 40260196 40260378 40260267 Y NA NA NA NA NA NA THUMPD2 255789 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 40261444 40261729 40261611 Y NA NA NA NA NA NA THUMPD2 257037 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 40630548 40630840 40630736 Y NA NA NA NA NA NA SLC8A1 205353 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 43302253 43302513 43302383 Y NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 149235 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 43405877 43406433 43406206 Y OXER1 ZFP36L2 ZFP36L2,THADA,LOC100129726 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZFP36L2 45315 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 47076896 47077421 47077187 Y SOCS5,SOCS5,MCFD2,MCFD2 NA NA NA NA NA TTC7A 63875 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 47418967 47419222 47419129 Y NA CALM2 TTC7A,C2orf61,SOCS5,MCFD2,CALM2,EPCAM IMR90 Hi-C 24141950 CALM2 17227 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 51010628 51010803 51010737 Y NRXN1,NRXN1 NA NA NA NA NA STON1 2256106 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 54196339 54196842 54196524 Y ASB3,ASB3,PSME4 ACYP2,PSME4 NA NA NA NA PSME4 362 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 54787503 54787764 54787623 Y RTN4,SPTBN1 NA NA NA NA NA SPTBN1 106081 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 54799241 54799892 54799606 Y SPTBN1 NA NA NA NA NA SPTBN1 117819 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 56089907 56090266 56090122 Y NA NA NA NA NA NA EFEMP1 59008 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 58347874 58348075 58347917 Y NA NA NA NA NA NA FANCL 118432 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 61464355 61464721 61464539 Y NA NA NA NA NA NA AHSA2 61802 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 61586795 61586939 61586907 Y AHSA2,USP34 NA NA NA NA NA USP34 108965 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 61698926 61699282 61699220 Y PUS10,AHSA2,USP34 USP34 NA NA NA NA USP34 3022 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 62689007 62689250 62689129 Y NA TMEM17 EHBP1,COMMD1,OTX1,LOC100132215,TMEM17 IMR90 Hi-C 24141950 TMEM17 47779 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 62803591 62803729 62803643 Y NA NA EHBP1 IMR90 Hi-C 24141950 TMEM17 66562 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 62805190 62805410 62805295 Y NA NA EHBP1 IMR90 Hi-C 24141950 TMEM17 68161 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 64587056 64587400 64587325 Y NA NA AFTPH IMR90 Hi-C 24141950 LGALSL 91703 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 64994926 64995226 64995021 Y SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2 SERTAD2 SERTAD2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 18787 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 65065938 65066285 65066136 Y AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2 NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 SERTAD2 89799 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 65583296 65583698 65583484 Y NA NA NA NA NA NA SPRED2 74073 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 67517733 67518064 67517835 Y NA NA MEIS1,ETAA1 IMR90 Hi-C 24141950 ETAA1 104387 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 67625110 67625487 67625291 Y ETAA1 ETAA1 NA NA NA NA ETAA1 2659 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 69750715 69750748 69750731 Y NA NA NA NA NA NA NFU1 87955 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 71725442 71725771 71725690 Y DYSF DYSF NA NA NA NA DYSF 46590 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 71944095 71944430 71944253 Y NA NA DYSF IMR90 Hi-C 24141950 DYSF 265243 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 72416850 72417011 72416931 Y NA NA NA NA NA NA EXOC6B 634159 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 72748040 72748317 72748179 Y NA NA NA NA NA NA EXOC6B 302853 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 72980109 72980387 72980306 Y NA NA NA NA NA NA EXOC6B 70783 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 74258403 74258434 74258418 Y NA TET3 DGUOK,STAMBP,ACTG2,TET3,BOLA3,BOLA3-AS1 IMR90 Hi-C 24141950 TET3 30563 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 74765672 74765911 74765792 Y WBP1,LBX2,LOXL3,DOK1 LBX2,PCGF1,HTRA2,AUP1 NA NA NA NA AUP1 10606 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 75836166 75836348 75836343 Y NA MRPL19 FAM176A,TACR1 IMR90 Hi-C 24141950 MRPL19 35561 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 85147093 85147556 85147171 Y TMSB10 TMSB10,KCMF1 NA NA NA NA TMSB10 16344 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 85154234 85154422 85154323 Y NA TMSB10,KCMF1 NA NA NA NA TMSB10 23485 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 85173188 85173797 85173736 Y TMSB10 TMSB10,KCMF1 KCMF1,TMSB10 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KCMF1 22419 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 86692253 86692485 86692369 Y NA KDM3A NA NA NA NA KDM3A 26483 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 88590567 88590888 88590740 Y C2orf51 NA NA NA NA NA KRCC1 237319 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 88899554 88899981 88899832 Y EIF2AK3 EIF2AK3 NA NA NA NA EIF2AK3 25113 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 91936197 91936406 91936290 Y NA NA NA NA NA NA AC116050.1 160661 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 91954549 91954973 91954634 Y NA NA NA NA NA NA AC116050.1 179013 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 91960340 91960566 91960493 Y NA NA NA NA NA NA AC116050.1 184804 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 97151625 97152085 97151839 Y ASTL,DUSP2,TMEM127,KIAA1310,CNNM4,ARID5A ARID5A NA NA NA NA ARID5A 48395 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 97204407 97205263 97204568 Y NA ARID5A NA NA NA NA ARID5A 3927 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 98364129 98364314 98364298 Y TMEM131,ZAP70,ZAP70 NA NA NA NA NA ACTR1B 85559 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 98465985 98466159 98466067 Y NA NA NA NA NA NA TMEM131 144229 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 98822932 98823207 98823080 Y NA NA NA NA NA NA VWA3B 121353 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 100124156 100124186 100124170 Y NA REV1 NA NA NA NA REV1 19659 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 100685193 100685529 100685389 Y AFF3 NA NA NA NA NA CHST10 346589 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 100908504 100908788 100908727 Y NA NA NA NA NA NA CHST10 123330 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 102699368 102699976 102699672 Y IL1R1,MAP4K4,MAP4K4 IL1R1 IL1R2,IL1RL2 IMR90 Hi-C 24141950 IL1R1 20364 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 106008939 106009297 106009286 Y NA FHL2 NA NA NA NA FHL2 43673 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 106020631 106021071 106020783 Y FHL2,FHL2 FHL2 NA NA NA NA FHL2 31899 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 109209973 109210484 109210252 Y LIMS1,RANBP2,LIMS1,LIMS1 NA NA NA NA NA LIMS1 61116 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 109210699 109211038 109210811 Y LIMS1,RANBP2,LIMS1,LIMS1 NA NA NA NA NA LIMS1 61842 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 113384986 113385271 113385131 Y NA CHCHD5,AC079922.2,SLC20A1 NA NA NA NA AC079922.2 7242 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 113398370 113398650 113398523 Y NA AC079922.2,SLC20A1 NA NA NA NA SLC20A1 2784 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr2 113448603 113448987 113448785 Y IL36B,IL36G,IL1RN,IL1B,IL1A SLC20A1 POLR1B,CHCHD5,SLC20A1,CKAP2L,FLJ42351 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC20A1 47169 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 113450039 113450435 113450231 Y IL36B,IL36G,PSD4,IL1RN,IL1B,IL1A SLC20A1 SLC20A1,FLJ42351 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC20A1 48605 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 113569466 113569945 113569683 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B CKAP2L,IL1A,IL1B NA NA NA NA IL1B 22535 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 113634636 113634920 113634776 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B IL1B IL1B,CKAP2L,IL1A,IL37 IMR90 Hi-C 24141950 IL1B 42156 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 113637417 113638142 113637790 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B IL1B CKAP2L,IL1A,IL1B,IL37 IMR90 Hi-C 24141950 IL1B 44937 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 114039556 114039944 114039632 Y NA PAX8 NA NA NA NA PAX8 5029 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 114082449 114082815 114082523 Y NA PAX8 PAX8,LOC654433 IMR90 Hi-C 24141950 PAX8 47922 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 120996274 120996566 120996498 Y NA TMEM185B,RALB EPB41L5,RALB,TMEM185B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RALB 634 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 121624920 121625080 121625001 Y NA NA NA NA NA NA GLI2 133721 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 127772292 127772580 127772500 Y MAP3K2 NA NA NA NA NA BIN1 90351 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 134878887 134879265 134878997 Y NA MGAT5 NA NA NA NA MGAT5 3333 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 135931129 135931440 135931285 Y NA NA NA NA NA NA RAB3GAP1 123294 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 150999106 150999378 150999253 Y RND3 NA RND3,MMADHC,RBM43 IMR90 Hi-C 24141950 RND3 394147 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 151383394 151383753 151383509 Y RND3 RND3 RND3,RBM43 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RND3 9772 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 151537937 151538357 151538169 Y NA NA RBM43,RND3,MMADHC IMR90 Hi-C 24141950 RND3 144412 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 155558133 155558529 155558331 Y KCNJ3 NA NA NA NA NA NR4A2 1638331 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 160350650 160351006 160350912 Y MARCH7,CD302,BAZ2B NA NA NA NA NA BAZ2B 120197 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 161013283 161013451 161013369 Y NA NA NA NA NA NA PLA2R1 96162 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 161077067 161077509 161077240 Y ITGB6 NA RBMS1,ITGB6,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLA2R1 159946 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 161078300 161078513 161078433 Y ITGB6 NA RBMS1,ITGB6,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLA2R1 161179 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr2 161079390 161079792 161079655 Y ITGB6 NA RBMS1,ITGB6,TANK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PLA2R1 162269 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 161201536 161201707 161201641 Y NA NA NA NA NA NA MIR4785 60686 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 161348201 161348679 161348535 Y RBMS1 NA NA NA NA NA RBMS1 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 161522878 161523352 161523066 Y TANK,TANK NA ITGB6,RBMS1 IMR90 Hi-C 24141950 RBMS1 174573 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 164205577 164205788 164205730 Y NA NA FIGN IMR90 Hi-C 24141950 FIGN 384734 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 165683192 165683287 165683237 Y NA COBLL1 NA NA NA NA COBLL1 14902 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 172792873 172793084 172792979 Y NA HAT1 NA NA NA NA HAT1 15915 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 173114788 173114930 173114869 Y NA NA ITGA6 IMR90 Hi-C 24141950 DLX2 149160 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 173116941 173117298 173117012 Y NA NA ITGA6 IMR90 Hi-C 24141950 DLX2 151313 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 173316258 173316587 173316571 Y NA ITGA6 NA NA NA NA ITGA6 26176 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 173941754 173942308 173942062 Y ZAK NA NA NA NA NA CDCA7 275240 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 174963658 174963852 174963755 Y NA NA NA NA NA NA SP3 135228 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 175519164 175519290 175519227 Y NA WIPF1 NA NA NA NA WIPF1 26354 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 175762241 175762347 175762322 Y NA NA NA NA NA NA CHN1 105750 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 176846427 176846539 176846507 Y NA KIAA1715 NA NA NA NA KIAA1715 19028 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 187601377 187601405 187601389 Y ZSWIM2,FAM171B FAM171B NA NA NA NA FAM171B 44679 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 188347584 188347786 188347681 Y NA NA NA NA NA NA TFPI 80701 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 190729809 190730106 190729887 Y OSGEPL1,PMS1 C2orf88 NA NA NA NA C2orf88 12229 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 191706618 191706816 191706674 Y GLS GLS,AC005540.3 GLS,STAT1,NAB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLS 36737 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr2 191706974 191707041 191707034 Y GLS GLS,AC005540.3 GLS,STAT1,NAB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLS 36512 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 191708638 191708846 191708778 Y STAT4,NAB1,STAT1,GLS GLS,AC005540.3 GLS,STAT1,NAB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLS 34707 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr2 191709136 191709198 191709167 Y STAT4,NAB1,STAT1,GLS GLS,AC005540.3 GLS,STAT1,NAB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLS 34355 CAGE SK-OV-3-R hg19 FANTOM5 6.36738042696793 chr2 191711355 191711777 191711579 Y GLS GLS,AC005540.3 GLS,STAT1,NAB1 IMR90 Hi-C 24141950 GLS 31776 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 192544982 192545232 192545125 Y OBFC2A NA NA NA NA NA MYO1B 437071 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 197099483 197099689 197099603 Y STK17B NA NA NA NA NA STK17B 60256 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 200168536 200168843 200168690 Y NA NA NA NA NA NA SATB2 165146 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr2 200839985 200840279 200840201 Y NA C2orf47,TYW5 NA NA NA NA TYW5 21526 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 201989489 201990098 201989672 Y BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10 AC007272.3,CFLAR NA NA NA NA CFLAR 10662 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 201990242 201990732 201990460 Y BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10 AC007272.3,CFLAR NA NA NA NA CFLAR 11415 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 201992378 201992654 201992500 Y BZW1,BZW1,BZW1,CLK1,CLK1,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10 AC007272.3,CFLAR NA NA NA NA CFLAR 13551 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 202517448 202517800 202517452 Y NA TMEM237,MPP4 NA NA NA NA TMEM237 11155 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 202898182 202898685 202898353 Y TMEM237,FZD7 FZD7 NA NA NA NA FZD7 872 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr2 204646981 204647288 204647136 Y NA NA CD28,RAPH1,ABI2,CYP20A1 IMR90 Hi-C 24141950 RAPH1 248848 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 204667019 204667435 204667267 Y NA NA RAPH1,CD28 IMR90 Hi-C 24141950 RAPH1 268886 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 204667512 204667772 204667687 Y NA NA RAPH1,CD28 IMR90 Hi-C 24141950 RAPH1 269379 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 204668913 204669218 204669026 Y NA NA RAPH1,CD28,ABI2 IMR90 Hi-C 24141950 RAPH1 270780 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 204672850 204673169 204672900 Y NA NA RAPH1,CD28,NBEAL1,CYP20A1 IMR90 Hi-C 24141950 RAPH1 274717 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 204676480 204676691 204676598 Y NA NA RAPH1,CD28,NBEAL1,CYP20A1 IMR90 Hi-C 24141950 RAPH1 278347 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 205530118 205530314 205530216 Y NA NA NA NA NA NA NRP2 1014400 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 206571507 206572136 206571741 Y NRP2,INO80D NRP2 NA NA NA NA NRP2 26793 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 206613471 206613845 206613585 Y NA NA NA NA NA NA NRP2 68757 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 208027980 208028625 208028335 Y CREB1,KLF7 KLF7 NA NA NA NA KLF7 1366 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr2 208028732 208029438 208029179 Y METTL21A,CREB1,KLF7 KLF7 NA NA NA NA KLF7 553 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 208123048 208123437 208123243 Y NA NA KLF7,CREB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 93057 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 208198821 208199856 208199157 Y KLF7 NA KLF7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF7 168830 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 208395422 208395980 208395659 Y PLEKHM3,METTL21A,METTL21A,CREB1 CREB1 NA NA NA NA CREB1 2961 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 216216233 216216482 216216439 Y NA ATIC NA NA NA NA ATIC 41693 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 216224117 216224404 216224261 Y NA ATIC NA NA NA NA ATIC 49577 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 216529638 216529897 216529693 Y NA NA NA NA NA NA AC012462.1 230662 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 216549778 216550136 216550038 Y NA NA NA NA NA NA AC012462.1 250802 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 216558345 216558652 216558547 Y NA NA NA NA NA NA AC012462.1 259369 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 216638374 216638853 216638649 Y FN1 NA NA NA NA NA MREG 257966 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 216649222 216649408 216649315 Y NA NA NA NA NA NA MREG 247411 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 216695142 216695306 216695226 Y NA NA NA NA NA NA MREG 201513 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 216764920 216765387 216765135 Y NA NA LOC646324,FN1,ATIC IMR90 Hi-C 24141950 MREG 131432 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 217312390 217312696 217312543 Y NA SMARCAL1,RPL37A,AC098820.3 NA NA NA NA SMARCAL1 37253 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 217970488 217971016 217970653 Y NA NA IGFBP5,DIRC3,IGFBP2,TNP1 IMR90 Hi-C 24141950 IGFBP5 412240 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 218088198 218088590 218088283 Y NA NA DIRC3,IGFBP5,IGFBP2 IMR90 Hi-C 24141950 IGFBP5 529950 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 218764264 218764471 218764407 Y TMBIM1,SLC11A1,PNKD,ARPC2,ARPC2 NA NA NA NA NA TNS1 101247 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 218767248 218767888 218767577 Y TMBIM1,SLC11A1,PNKD,ARPC2,ARPC2 NA NA NA NA NA TNS1 97830 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 219270976 219271406 219271230 Y CXCR2,CXCR2,CXCR1,ZNF142,USP37,TTLL4,SLC11A1 AC021016.6,CTDSP1 NA NA NA NA CTDSP1 9997 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 219827943 219828258 219828078 Y USP37,STK36,PTPRN,PTPRN,CDK5R2,FEV NA NA NA NA NA NHEJ1 195329 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 220138813 220139187 220138862 Y INHA,CCDC108,ATG9A,GLB1L ATG9A,ANKZF1,STK16,TUBA4A,DNAJB2 NA NA NA NA TUBA4A 1705 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr2 220317654 220318040 220317775 Y GMPPA,GMPPA SPEG,GMPPA NA NA NA NA SPEG 20086 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 221000091 221000153 221000122 Y NA NA EPHA4 IMR90 Hi-C 24141950 AC009502.1 452574 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 221372972 221373224 221373091 Y NA NA EPHA4 IMR90 Hi-C 24141950 AC009502.1 825455 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 222435699 222436339 222436058 Y EPHA4 EPHA4 NA NA NA NA EPHA4 583 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 223829237 223829437 223829324 Y NA NA NA NA NA NA ACSL3 105585 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 224569350 224569680 224569515 Y NA NA AP1S3 IMR90 Hi-C 24141950 SCG2 104129 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 224951199 224951592 224951399 Y NA SERPINE2 NA NA NA NA SERPINE2 49163 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 225813471 225813927 225813697 Y CUL3 NA NA NA NA NA DOCK10 91235 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 227517160 227517436 227517301 Y IRS1 NA IRS1,LOC646736 IMR90 Hi-C 24141950 IRS1 145039 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 228491393 228491563 228491496 Y WDR69 NA NA NA NA NA AGFG1 156525 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 230309727 230309993 230309861 Y TRIP12,PID1 NA NA NA NA NA PID1 175726 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 230736228 230736612 230736477 Y SP110 FBXO36,TRIP12 NA NA NA NA FBXO36 48406 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 231533310 231533654 231533603 Y SP110,SP140 CAB39 CAB39 IMR90 Hi-C 24141950 CAB39 41906 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 231658746 231658958 231658902 Y SP140L,SP100,SP100 NA NA NA NA NA ITM2C 68396 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 232468888 232470128 232469532 Y DIS3L2,PTMA,NMUR1 NA NA NA NA NA PTMA 99477 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr2 232507409 232507767 232507481 Y NA NA PDE6D IMR90 Hi-C 24141950 PTMA 61838 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 232530920 232531416 232531295 Y NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 38189 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 233763823 233764207 233764133 Y EFHD1,NGEF NA NA NA NA NA NGEF 111775 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 233766797 233767190 233766879 Y NA NA NA NA NA NA NGEF 108792 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 235187648 235187782 235187715 Y ARL4C NA TRPM8 IMR90 Hi-C 24141950 ARL4C 215915 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 235935583 235936015 235935761 Y NA NA NA NA NA NA SH3BP4 76966 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 238374283 238374521 238374346 Y COL6A3 AC112721.2,MLPH LRRFIP1,MLPH,PRLH,COL6A3,RAB17 IMR90 Hi-C 24141950 MLPH 17550 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr2 238392046 238392381 238392184 Y LRRFIP1,MLPH NA NA NA NA NA MLPH 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 238596328 238596696 238596497 Y LRRFIP1 NA NA NA NA NA LRRFIP1 62109 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 239080379 239080669 239080523 Y NA FAM132B,ILKAP NA NA NA NA FAM132B 14756 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 240179337 240179507 240179411 Y HDAC4 NA NA NA NA NA TWIST2 424664 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 240196933 240197336 240197049 Y HDAC4 NA NA NA NA NA TWIST2 442260 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr2 240386953 240387173 240387118 Y NA NA NDUFA10,HDAC4,LOC150935 IMR90 Hi-C 24141950 NDUFA10 575646 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 1398801 1399138 1399021 Y FKBP1A FKBP1A SNPH,RAD21L1,FKBP1A-SDCBP2,LOC100507495 IMR90 Hi-C 24141950 FKBP1A 26995 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 1789800 1790010 1789904 Y SDCBP2,SIRPB2,PDYN,SIRPA,SIRPA,SIRPA NA SIRPA,STK35 IMR90 Hi-C 24141950 SIRPA 83144 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 1800783 1800896 1800815 Y SDCBP2,SIRPB2,SIRPB1,SIRPA,SIRPA,SIRPA NA SIRPA IMR90 Hi-C 24141950 SIRPA 72258 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 2978820 2979208 2979015 Y NA MRPS26 NA NA NA NA MRPS26 45383 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 3286864 3286977 3286928 Y NA NA NA NA NA NA SLC4A11 69028 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 5816621 5816994 5816701 Y NA NA NA NA NA NA C20orf196 87582 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 7058177 7058257 7058218 Y NA NA NA NA NA NA RP4-775C13.1 865831 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 10477280 10477577 10477381 Y NA NA NA NA NA NA MKKS 64410 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 10492212 10492484 10492413 Y NA NA NA NA NA NA MKKS 79342 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 13434936 13435260 13435184 Y NA NA NA NA NA NA TASP1 182327 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 17538189 17538505 17538334 Y NA BFSP1,DSTN NA NA NA NA BFSP1 9360 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 19796265 19796476 19796342 Y RIN2,RIN2 NA RIN2,SLC24A3,NAA20 IMR90 Hi-C 24141950 RP1-122P22.2 59913 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 19797665 19798070 19797910 Y RIN2,RIN2 NA RIN2,SLC24A3,NAA20 IMR90 Hi-C 24141950 RP1-122P22.2 61313 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 19894866 19895287 19895037 Y NA NA NA NA NA NA NAA20 100473 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 22392618 22392869 22392732 Y NA NA NA NA NA NA THBD 635509 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 23123782 23124035 23123853 Y NA NA LOC200261 IMR90 Hi-C 24141950 THBD 95404 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 23125768 23126430 23126237 Y THBD,CD93,GZF1,CST3 NA LOC200261 IMR90 Hi-C 24141950 THBD 97390 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 29647996 29648434 29648295 Y DEFB121,DEFB116 FRG1B NA NA NA NA FRG1B 38139 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 30148718 30149081 30148825 Y HCK,HM13 HM13,ID1 NA NA NA NA ID1 42005 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 30175524 30175854 30175562 Y NA ID1 NA NA NA NA ID1 15232 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 30182515 30183026 30182914 Y NA ID1 HM13 MCF7 ChIA-PET 22265404 ID1 8060 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 30191850 30192346 30192159 Y ID1 ID1 NA NA NA NA ID1 764 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr20 30260311 30260679 30260495 Y NA BCL2L1 NA NA NA NA BCL2L1 49113 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 30292336 30292785 30292516 Y NA BCL2L1,TPX2 COX4I2 IMR90 Hi-C 24141950 BCL2L1 17007 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 30300504 30300973 30300648 Y NA BCL2L1,TPX2 NA NA NA NA BCL2L1 8819 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 30301047 30301377 30301326 Y NA BCL2L1,TPX2 NA NA NA NA BCL2L1 8415 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 31998840 31999088 31998873 Y C20orf185 CDK5RAP1,SNTA1 CDK5RAP1 IMR90 Hi-C 24141950 CDK5RAP1 11473 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 32425244 32425406 32425325 Y CHMP4B CHMP4B NA NA NA NA CHMP4B 28134 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 33900177 33900484 33900409 Y GSS,EIF6,EIF6 EDEM2,EIF6 NA NA NA NA EIF6 29389 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 34217204 34217560 34217502 Y NA SPAG4,CPNE1,RBM12 NA NA NA NA SPAG4 15390 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 35464098 35464342 35464182 Y RBL1,DSN1,DSN1 NA NA NA NA NA DSN1 63877 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 36693519 36693713 36693616 Y RPRD1B TTI1,RPRD1B NA NA NA NA RPRD1B 33571 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 42286061 42286420 42286177 Y SRSF6,L3MBTL1,MYBL2 MYBL2 MYBL2 IMR90 Hi-C 24141950 MYBL2 7334 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 43965327 43965544 43965453 Y SDC4 SDC4,SYS1,SYS1-DBNDD2 NA NA NA NA SDC4 9520 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 43972821 43973151 43973055 Y SYS1,SDC4 SDC4,SYS1,SYS1-DBNDD2 NA NA NA NA SDC4 1913 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 44410242 44410504 44410445 Y NA DNTTIP1,UBE2C,SNX21 NA NA NA NA DNTTIP1 8072 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 45946049 45946481 45946179 Y NA RP4-569M23.2,ZMYND8 NA NA NA NA RP4-569M23.2 32824 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 45962816 45963214 45963054 Y NA RP4-569M23.2,ZMYND8 NA NA NA NA RP4-569M23.2 16091 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 46299616 46300006 46299878 Y NCOA3,SULF2,SULF2 NA NA NA NA NA SULF2 113354 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 46355529 46356013 46355849 Y SULF2,SULF2 NA NA NA NA NA SULF2 57347 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 46653872 46653986 46653882 Y NA NA SULF2 MCF7 ChIA-PET 22265404 SULF2 240512 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr20 46924305 46924474 46924390 Y NA NA SULF2,NCOA3,PREX1,ARFGEF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SULF2 510945 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 47337131 47337315 47337224 Y NA NA NA NA NA NA PREX1 105105 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 48646361 48646933 48646559 Y NA SNAI1 TMEM189-UBE2V1,UBE2V1,SNAI1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SNAI1 48825 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 49596851 49597164 49596956 Y PTPN1 DPM1,MOCS3,KCNG1 NA NA NA NA MOCS3 23488 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 50180369 50180507 50180463 Y NFATC2 NA NA NA NA NA ATP9A 202666 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 50247670 50248383 50248096 Y NA NA NA NA NA NA ATP9A 134790 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 50366772 50367203 50366881 Y ZFP64,ATP9A ATP9A NA NA NA NA ATP9A 15970 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 51110889 51111034 51110969 Y NA NA NA NA NA NA ZFP64 292042 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52239995 52240318 52240062 Y ZNF217 ZNF217 SUMO1P1,BMP7,BCAS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 15549 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52353948 52354213 52354172 Y ZNF217 NA ZNF217,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 129502 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52355086 52355238 52355182 Y NA NA ZNF217,BCAS1 IMR90 Hi-C 24141950 ZNF217 130640 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52364781 52365137 52364834 Y NA NA ZNF217,BCAS1,SUMO1P1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 140335 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52391089 52391563 52391364 Y NA NA ZNF217,BCAS1,SUMO1P1 IMR90 Hi-C 24141950 ZNF217 166643 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 52444580 52444892 52444748 Y NA NA ZNF217,SUMO1P1,BCAS1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 220134 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52445816 52446339 52446069 Y ZNF217 NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 221370 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr20 52530834 52531236 52530898 Y ZNF217 NA SUMO1P1,BMP7,ZNF217 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFDN4 291150 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52543055 52543571 52543250 Y ZNF217 NA NA NA NA NA PFDN4 278815 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 52565886 52566139 52565988 Y ZNF217 NA NA NA NA NA PFDN4 256247 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 52749873 52750284 52750109 Y NA NA NA NA NA NA PFDN4 72102 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 56270075 56270492 56270216 Y PMEPA1,PMEPA1,PMEPA1 PMEPA1 NA NA NA NA PMEPA1 14100 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 56293544 56293843 56293665 Y NA PMEPA1 NA NA NA NA PMEPA1 8952 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 56323662 56324029 56323724 Y NA PMEPA1 NA NA NA NA PMEPA1 39070 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr20 57198784 57199334 57199089 Y NA STX16,STX16-NPEPL1 NA NA NA NA STX16 24994 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr20 61192605 61193059 61192901 Y NA NA NA NA NA NA SLCO4A1 78738 CAGE SK-OV-3-R hg19 FANTOM5 6.36738042696793 chr21 14888211 14888445 14888335 Y NA NA NA NA NA NA AP001347.6 509297 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 15899272 15899518 15899378 Y NA NA NA NA NA NA HSPA13 145467 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 16435480 16435873 16435862 Y NRIP1 NRIP1 NA NA NA NA NRIP1 159 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 17103695 17103792 17103750 Y USP25 USP25 NA NA NA NA USP25 3351 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 22592498 22592563 22592531 Y NA NA NA NA NA NA TUBAP 2186885 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 28796596 28796902 28796773 Y NA NA ADAMTS5 IMR90 Hi-C 24141950 ADAMTS5 459764 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 28797067 28797570 28797293 Y NA NA ADAMTS5 IMR90 Hi-C 24141950 ADAMTS5 460235 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 28942187 28942353 28942343 Y NA NA ADAMTS1,ADAMTS5 IMR90 Hi-C 24141950 ADAMTS5 605355 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 28942556 28942990 28942803 Y NA NA ADAMTS1,ADAMTS5,MIR4759 IMR90 Hi-C 24141950 ADAMTS5 605724 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr21 28945118 28945334 28945247 Y NA NA ADAMTS1,ADAMTS5,MIR4759 IMR90 Hi-C 24141950 ADAMTS5 608286 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 31029045 31029571 31029224 Y BACH1,BACH1 NA NA NA NA NA BACH1 464653 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 31220806 31221111 31220959 Y KRTAP27-1,KRTAP25-1,KRTAP23-1 NA NA NA NA NA BACH1 656414 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 35917479 35917977 35917777 Y KCNE1,RUNX1 NA NA NA NA NA RCAN1 67464 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 35925582 35925949 35925790 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA RCAN1 59492 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 36179679 36180279 36179996 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA RCAN1 194238 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 36254204 36254725 36254297 Y KCNE1,RUNX1,RUNX1 NA NA NA NA NA RCAN1 268763 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 36457286 36457490 36457388 Y NA NA RUNX1 IMR90 Hi-C 24141950 RCAN1 471845 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 38630405 38630786 38630710 Y DYRK1A,DYRK1A AP001432.14,DSCR3 NA NA NA NA DSCR3 7476 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 38801876 38802213 38802018 Y DYRK1A,DYRK1A,DYRK1A,DYRK1A NA NA NA NA NA DYRK1A 65784 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 38935728 38936411 38936235 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 199636 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr21 38936686 38937128 38936852 Y DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 200594 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 39678794 39679150 39678924 Y NA NA NA NA NA NA ETS2 496081 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 40225341 40225561 40225501 Y ETS2 NA LINC00114,ETS2,PSMG1,BRWD1 IMR90 Hi-C 24141950 ETS2 50110 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 40388041 40388127 40388084 Y ETS2 NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 165650 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 40690087 40690386 40690238 Y NA BRWD1,HMGN1 NA NA NA NA BRWD1 1099 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 40814197 40814412 40814270 Y NA LCA5L,SH3BGR NA NA NA NA LCA5L 1319 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 41005118 41005297 41005205 Y NA NA SH3BGR IMR90 Hi-C 24141950 B3GALT5 78749 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 43174806 43174946 43174886 Y NA RIPK4 NA NA NA NA RIPK4 10320 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 43181534 43181711 43181623 Y MX2,MX1,MX1,MX1,ZNF295,ABCG1 RIPK4 NA NA NA NA RIPK4 3555 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 43188787 43189188 43188843 Y RIPK4 RIPK4 NA NA NA NA RIPK4 3521 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 43460613 43461088 43460825 Y C2CD2,SLC37A1 NA NA NA NA NA C2CD2 88614 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 44817742 44818046 44817914 Y NA SIK1,LINC00319 NA NA NA NA SIK1 26962 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 44936784 44937143 44936907 Y PDXK H2BFS NA NA NA NA H2BFS 45927 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 45015260 45015643 45015451 Y NA H2BFS NA NA NA NA H2BFS 32190 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 45020604 45020960 45020754 Y NA H2BFS NA NA NA NA H2BFS 37534 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr21 45023085 45023419 45023272 Y TRAPPC10,PDXK,CSTB,U2AF1 H2BFS NA NA NA NA H2BFS 40015 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 45237788 45238060 45237872 Y TRAPPC10,ICOSLG,AGPAT3 CSTB,RRP1,AGPAT3 NA NA NA NA RRP1 30394 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 45573018 45573302 45573138 Y PDXK,CSTB,TRPM2,ICOSLG PWP2,C21orf33 NA NA NA NA C21orf33 21531 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 46783934 46784395 46784118 Y NA COL18A1 ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 COL18A1 38657 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr21 47968526 47968894 47968542 Y NA NA NA NA NA NA PRMT2 84185 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 19159081 19159242 19159165 Y NA DGCR14,SLC25A1 NA NA NA NA SLC25A1 5101 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 20068627 20068902 20068750 Y COMT,DGCR8 DGCR8,RANBP1,TRMT2A,ZDHHC8 NA NA NA NA DGCR8 2872 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 23863943 23864332 23864232 Y GNAZ,RTDR1,BCR NA ZDHHC8P1 IMR90 Hi-C 24141950 ZDHHC8P1 121030 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr22 26957082 26957129 26957107 Y NA TPST2 NA NA NA NA TPST2 33552 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 27525231 27525565 27525473 Y NA NA NA NA NA NA RP5-1172A22.1 93123 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 27530003 27530818 27530508 Y NA NA NA NA NA NA RP5-1172A22.1 87870 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 27531437 27531936 27531772 Y NA NA NA NA NA NA RP5-1172A22.1 86752 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 27616278 27616656 27616487 Y NA RP5-1172A22.1 MIAT,PITPNB IMR90 Hi-C 24141950 RP5-1172A22.1 2032 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 27872779 27873029 27872871 Y NA NA PITPNB,TTC28,TTC28-AS1,MN1,MIAT IMR90 Hi-C 24141950 RP5-1172A22.1 254091 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr22 30014203 30014547 30014300 Y NA NIPSNAP1,NF2 NA NA NA NA NF2 16658 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 30018031 30018407 30018261 Y NF2 NIPSNAP1,NF2 NA NA NA NA NF2 20486 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr22 30646485 30646883 30646861 Y SEC14L2,RNF215,LIF LIF,GATSL3 NA NA NA NA LIF 5645 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 30653574 30654311 30654075 Y RNF215,GAL3ST1 LIF,GATSL3 LIF IMR90 Hi-C 24141950 LIF 12734 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 31226011 31226350 31226247 Y NA NA NA NA NA NA TUG1 138313 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 31639418 31639541 31639442 Y NA LIMK2 NA NA NA NA LIMK2 33193 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 36766615 36766810 36766723 Y NCF4,MYH9 MYH9 NA NA NA NA MYH9 15253 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 37638328 37638951 37638750 Y SH3BP1,NOL12,MFNG,MFNG,LGALS2,GGA1,GGA1,NCF4,CSF2RB,RAC2,CYTH4 C1QTNF6,Z82188.1 NA NA NA NA RAC2 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 38434638 38434982 38434731 Y NA PICK1 BAIAP2L2,LOC400927,KCNJ4,DMC1 IMR90 Hi-C 24141950 PICK1 15336 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 40357456 40357744 40357564 Y TNRC6B,GRAP2 NA NA NA NA NA RPL7P52 143326 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 41776948 41777130 41776981 Y NA TEF NA NA NA NA TEF 15611 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 41840300 41840792 41840564 Y NA TOB2,PHF5A,ACO2 NA NA NA NA TOB2 235 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 42339043 42339310 42339264 Y NA CENPM NA NA NA NA CENPM 1858 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 44705061 44705332 44705192 Y PARVB,PARVG,PARVG KIAA1644 NA NA NA NA KIAA1644 1399 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 45944996 45945587 45945178 Y NA FBLN1 NA NA NA NA FBLN1 48878 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 46004834 46005031 46004922 Y C22orf26 NA NA NA NA NA ATXN10 60647 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 46137558 46137905 46137731 Y NA NA NA NA NA NA ATXN10 71880 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 46330758 46331082 46331012 Y NA WNT7B NA NA NA NA WNT7B 39927 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr22 46364946 46365266 46365098 Y NA WNT7B NA NA NA NA WNT7B 5743 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 46464940 46465203 46464976 Y NA RP6-109B7.3,C22orf26,MIR4763 NA NA NA NA C22orf26 16916 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr22 50105800 50106184 50105992 Y NA NA NA NA NA NA BRD1 112976 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 50743986 50744741 50744427 Y PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2 PPP6R2 NA NA NA NA PLXNB2 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr22 51109040 51109307 51109069 Y SHANK3 ARSA,SHANK3 SHANK3,LMF2,NCAPH2,MAPK8IP2,CHKB-CPT1B,ARSA,SBF1,PPP6R2,ODF3B,SYCE3,KLHDC7B,TYMP,LOC100144603 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SHANK3 1536 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 4462883 4463183 4463026 Y NA SUMF1 NA NA NA NA SUMF1 43782 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 4783422 4783695 4783523 Y EDEM1,BHLHE40,ARL8B NA NA NA NA NA BHLHE40 235106 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 4870806 4870892 4870849 Y NA NA NA NA NA NA BHLHE40 147909 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 5027453 5027635 5027574 Y EDEM1,ARL8B,BHLHE40 BHLHE40 NA NA NA NA BHLHE40 8652 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 5028534 5029013 5028702 Y ITPR1,EDEM1,ARL8B,BHLHE40 BHLHE40 NA NA NA NA BHLHE40 9733 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 5036570 5037120 5036867 Y NA BHLHE40 NA NA NA NA BHLHE40 17769 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 5058332 5058543 5058409 Y EDEM1,ARL8B,BHLHE40 BHLHE40 BHLHE40 MCF7,K562 ChIA-PET 22265404 BHLHE40 39531 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 5063521 5063694 5063575 Y EDEM1,ARL8B,BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 44720 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 5065036 5065378 5065161 Y BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 46235 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 5067974 5068590 5068209 Y EDEM1,ARL8B,BHLHE40 BHLHE40 BHLHE40,ITPR1,EGOT MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BHLHE40 49173 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 8524896 8525313 8525187 Y LMCD1 LMCD1 NA NA NA NA LMCD1 16080 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 8533422 8533759 8533554 Y NA LMCD1 NA NA NA NA LMCD1 7634 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 9721492 9721576 9721535 Y IL17RC,IL17RC,CIDEC,CIDEC MTMR14,BRPF1 NA NA NA NA MTMR14 32375 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 10233695 10234220 10233931 Y VHL,IRAK2,TATDN2 IRAK2 NA NA NA NA IRAK2 29146 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 10234749 10235085 10234824 Y ARPC4,VHL,IRAK2,TATDN2 IRAK2 NA NA NA NA IRAK2 30200 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 10402355 10402452 10402401 Y FANCD2 SEC13 NA NA NA NA SEC13 41493 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 11609664 11609798 11609746 Y NA NA NA NA NA NA VGLL4 150422 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 11688028 11688035 11688032 Y NA NA NA NA NA NA VGLL4 72185 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 12234951 12235397 12235194 Y RAF1,PPARG,PPARG NA NA NA NA NA TSEN2 288534 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 13035460 13035932 13035883 Y CAND2,IQSEC1,HDAC11,HDAC11,IQSEC1 NA NA NA NA NA IQSEC1 76685 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 13884272 13884624 13884569 Y WNT7A WNT7A NA NA NA NA WNT7A 34994 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 14167210 14167731 14167391 Y TMEM43,XPC CHCHD4,TMEM43 NA NA NA NA TMEM43 2770 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 16324333 16324353 16324342 Y NA DPH3,OXNAD1 NA NA NA NA OXNAD1 19627 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 17378312 17378639 17378476 Y NA NA NA NA NA NA RFTN1 824779 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 17674085 17674191 17674137 Y NA NA NA NA NA NA TBC1D5 810118 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 18580242 18580387 18580280 Y NA RAD23BP1 NA NA NA NA RAD23BP1 2077 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 27448460 27448581 27448568 Y NA NA NEK10 IMR90 Hi-C 24141950 SLC4A7 75330 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 29496223 29496522 29496266 Y NA NA NA NA NA NA RBMS3 175750 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 31737462 31737733 31737598 Y NA NA NA NA NA NA STT3B 165332 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 38072885 38073008 38072928 Y PLCD1 NA NA NA NA NA ACAA1 103725 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 39193999 39194528 39194467 Y NA TTC21A,GORASP1 NA NA NA NA CSRNP1 0 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 42062353 42062651 42062504 Y NA TRAK1 TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 9059 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 42922564 42922793 42922612 Y C3orf39 NA NA NA NA NA HIGD1A 78541 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 44040259 44040834 44040651 Y NA NA ANO10 IMR90 Hi-C 24141950 ANO10 309173 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr3 44621262 44622718 44622436 Y NA ZNF197 NA NA NA NA ZNF197 1662 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 45165992 45166137 45166089 Y NA CDCP1,RPS24P8 NA NA NA NA CDCP1 19777 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 45208648 45208845 45208728 Y LIMD1 CDCP1,RPS24P8 LARS2,CDCP1,CLEC3B,TMEM158 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RPS24P8 8981 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 45209101 45209416 45209191 Y LIMD1 CDCP1,RPS24P8 LARS2,CDCP1,CLEC3B,TMEM158 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RPS24P8 9434 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 46600040 46600219 46600077 Y NA NA NA NA NA NA NBEAL2 418954 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 47704557 47705253 47705047 Y SETD2 NA NA NA NA NA CSPG5 84275 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 48128782 48129302 48129029 Y NA MAP4,RP11-1029M24.1 NA NA NA NA MAP4 13 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 50204265 50204566 50204413 Y HYAL2 SEMA3F NA NA NA NA SEMA3F 13787 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 50264852 50265230 50265012 Y TUSC2,IP6K1,GNAI2,GNAI2 GNAI2,SEMA3B NA NA NA NA GNAI2 3128 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 50625949 50626261 50626110 Y RBM5,RASSF1,RASSF1,CACNA2D2 HEMK1,MAPKAPK3,CISH NA NA NA NA MAPKAPK3 20690 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 50664800 50665228 50664999 Y GNAI2,MAPKAPK3 MAPKAPK3,CISH,MIR4787 NA NA NA NA CISH 17538 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 51377903 51378233 51378113 Y NA MANF,RBM15B NA NA NA NA MANF 42245 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 53270281 53270430 53270371 Y PRKCD,DCP1A,TKT TKT NA NA NA NA TKT 17638 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 55178043 55178603 55178498 Y NA NA WNT5A,CACNA2D3 IMR90 Hi-C 24141950 WNT5A 343370 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 55194265 55194440 55194343 Y WNT5A NA WNT5A,CACNA2D3,ERC2 IMR90 Hi-C 24141950 WNT5A 327533 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 55194450 55194988 55194909 Y WNT5A NA WNT5A,CACNA2D3,ERC2 IMR90 Hi-C 24141950 WNT5A 326985 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 55224453 55224624 55224517 Y WNT5A NA WNT5A,CACNA2D3,ERC2,C3orf51 IMR90 Hi-C 24141950 WNT5A 297349 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 55364571 55364745 55364625 Y NA NA CACNA2D3,WNT5A,ERC2,C3orf51 IMR90 Hi-C 24141950 WNT5A 157228 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 55707711 55707857 55707784 Y NA NA NA NA NA NA WNT5A 185738 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 58038147 58038335 58038213 Y FLNB FLNB NA NA NA NA FLNB 46020 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 60715683 60716344 60716091 Y NA NA NA NA NA NA FHIT 518789 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 62572991 62573174 62573036 Y NA NA NA NA NA NA PTPRG-AS1 219986 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 69135158 69135511 69135504 Y NA TMF1,UBA3,ARL6IP5 NA NA NA NA ARL6IP5 3063 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 69790676 69790712 69790690 Y MITF MITF NA NA NA NA MITF 4090 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 70898973 70899254 70899114 Y NA NA NA NA NA NA FOXP1 731886 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 71150221 71150629 71150383 Y NA NA NA NA NA NA FOXP1 480511 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 71158778 71158960 71158907 Y NA NA NA NA NA NA FOXP1 472180 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 71628829 71629563 71629383 Y EIF4E3 FOXP1 NA NA NA NA FOXP1 1577 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 72388262 72388804 72388511 Y RYBP NA SHQ1,GXYLT2,RYBP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RYBP 105265 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 86842931 86843272 86843115 Y VGLL3 NA VGLL3 IMR90 Hi-C 24141950 VGLL3 194997 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 96336052 96336669 96336607 Y NA NA NA NA NA NA EPHA6 194756 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr3 98528830 98529143 98529110 Y NA NA NA NA NA NA DCBLD2 89390 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 98544884 98545154 98545150 Y NA NA NA NA NA NA DCBLD2 73379 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 98848000 98848317 98848116 Y DCBLD2 NA COL8A1,MIR548G IMR90 Hi-C 24141950 LINC00973 150098 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 99367111 99367532 99367193 Y NA COL8A1 NA NA NA NA COL8A1 11792 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 99584293 99584813 99584482 Y NA NA NA NA NA NA COL8A1 228974 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 99596957 99597300 99597045 Y TBC1D23 NA NA NA NA NA COL8A1 241638 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 99782957 99783256 99783070 Y NA NA TMEM30C IMR90 Hi-C 24141950 TBC1D23 194588 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 101403455 101403770 101403678 Y SENP7,RG9MTD1,PCNP,NFKBIZ,ZBTB11,RPL24 ZBTB11,CEP97 NA NA NA NA RPL24 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 101825381 101825701 101825541 Y NA NA LOC152225,FAM55C,NFKBIZ IMR90 Hi-C 24141950 NFKBIZ 280546 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 103522825 103523125 103522973 Y NA NA NA NA NA NA RNU1-43P 646021 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 104155776 104156155 104156140 Y NA NA NA NA NA NA ALCAM 927598 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 105087492 105087848 105087688 Y NA ALCAM NA NA NA NA ALCAM 3739 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr3 105088270 105088514 105088471 Y ALCAM ALCAM NA NA NA NA ALCAM 4517 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 107807468 107807936 107807811 Y MYH15,CD47 NA NA NA NA NA CD47 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 110490435 110490524 110490469 Y NA NA PVRL3-AS1,PVRL3 IMR90 Hi-C 24141950 PVRL3 296394 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 111287302 111287434 111287368 Y CD96,PLCXD2 ZBED2 NA NA NA NA ZBED2 24856 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 111623667 111623869 111623803 Y NA NA NA NA NA NA ABHD10 71988 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 111655124 111655265 111655201 Y NA ABHD10 NA NA NA NA ABHD10 40592 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 112390838 112391135 112390988 Y CCDC80 CCDC80 NA NA NA NA CCDC80 24461 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 114724447 114724794 114724621 Y NA NA NA NA NA NA ZBTB20 139324 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 115503837 115504240 115504182 Y NA NA NA NA NA NA ZBTB20 639719 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 115724212 115724599 115724432 Y NA NA NA NA NA NA ZBTB20 860094 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 119038073 119038376 119038095 Y NA ARHGAP31 NA NA NA NA ARHGAP31 26853 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 119238487 119238668 119238501 Y NA TIMMDC1 NA NA NA NA TIMMDC1 23108 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 120277715 120278240 120277932 Y NA NDUFB4 FSTL1,GPR156,LRRC58,NR1I2,NDUFB4,GTF2E1 IMR90 Hi-C 24141950 NDUFB4 34916 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 120493479 120494008 120493729 Y NA GTF2E1,RABL3 NA NA NA NA RABL3 33639 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 121716830 121717448 121716948 Y HCLS1,EAF2,CSTA,CD86 NA NA NA NA NA EAF2 164800 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 121798487 121798500 121798494 Y PARP9,PARP9,PARP9,DTX3L,CD86,CD86 NA NA NA NA NA EAF2 246457 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 122201925 122202222 122202174 Y NA KPNA1 NA NA NA NA KPNA1 29570 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 123459149 123459385 123459267 Y NA NA NA NA NA NA MYLK-AS1 156760 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 124531464 124532111 124531823 Y NA NA NA NA NA NA UMPS 84251 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 124553626 124554125 124554004 Y KALRN NA NA NA NA NA ITGB5 64140 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 126701397 126702091 126701497 Y PLXNA1 NA CHCHD6,PLXNA1 MCF7,K562 ChIA-PET 22265404 CHCHD6 280334 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 127465577 127465875 127465733 Y NA NA NA NA NA NA MGLL 74176 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 128957834 128958071 128957930 Y NA NA KIAA1257,CCDC48,GP9,ISY1-RAB43,CNBP,COPG1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CNBP 57069 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 131854898 131855187 131855050 Y NA NA CPNE4 IMR90 Hi-C 24141950 RPL7P16 105922 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 132138974 132139193 132139084 Y NA DNAJC13 NA NA NA NA DNAJC13 4604 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 133968581 133968789 133968685 Y NA RYK NA NA NA NA RYK 892 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 134045700 134046050 134045958 Y NA RP11-200A1.1,AMOTL2 NA NA NA NA RP11-200A1.1 15282 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 139018358 139018692 139018412 Y FOXL2,C3orf72 NA BPESC1 IMR90 Hi-C 24141950 COPB2 87882 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 139064285 139064552 139064299 Y NA COPB2,RP11-319G6.1 NA NA NA NA COPB2 42022 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 141130337 141130617 141130393 Y RASA2 NA NA NA NA NA RASA2 73272 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 148942843 148943311 148943144 Y NA NA NA NA NA NA HPS3 97472 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 149104739 149105065 149104981 Y COMMD2,TM4SF1 TM4SF1 GYG1,TM4SF18,TM4SF1,TM4SF4,WWTR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TM4SF1 11087 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 149265788 149265935 149265852 Y WWTR1 NA NA NA NA NA TM4SF1 172136 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 149333585 149333911 149333859 Y TM4SF18,TM4SF18,TM4SF1,WWTR1,WWTR1 NA NA NA NA NA WWTR1 118590 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 150417166 150417289 150417212 Y NA RP11-103G8.2 NA NA NA NA RP11-103G8.2 2062 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 151514227 151514622 151514246 Y NA NA NA NA NA NA MBNL1 444995 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 151996540 151996946 151996646 Y NA MBNL1 NA NA NA NA MBNL1 36923 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 152878171 152878732 152878352 Y P2RY1,RAP2B RAP2B NA NA NA NA RAP2B 142 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 156527707 156527883 156527795 Y NA PA2G4P4,LEKR1 NA NA NA NA PA2G4P4 1186 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 156538683 156538849 156538764 Y TIPARP,TIPARP,TIPARP,CCNL1,LEKR1,LEKR1 PA2G4P4,LEKR1 NA NA NA NA LEKR1 2421 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 159480182 159480541 159480238 Y NA NA NA NA NA NA SMC4 634521 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 159514645 159514911 159514780 Y NA NA NA NA NA NA SMC4 600151 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 161133387 161133714 161133484 Y NA NA NMD3 MCF7 ChIA-PET 22265404 B3GALNT1 312215 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 165215447 165215733 165215492 Y NA NA NA NA NA NA PDCD10 2234994 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 165217698 165218028 165217864 Y NA NA NA NA NA NA PDCD10 2232699 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 168726336 168726672 168726504 Y NA NA NA NA NA NA MECOM 652734 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr3 169300300 169300658 169300540 Y NA NA NA NA NA NA MECOM 78748 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 169379063 169379412 169379208 Y MECOM NA NA NA NA NA MECOM 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 170444418 170445820 170444586 Y CLDN11,CLDN11,RPL22L1,EIF5A2 NA CLDN11,SLC7A14,SKIL,PRKCI IMR90 Hi-C 24141950 RPL22L1 140452 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 170584649 170585013 170584680 Y NA RPL22L1,EIF5A2 NA NA NA NA RPL22L1 1259 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 171092657 171092985 171092739 Y NA NA NA NA NA NA TNIK 83212 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 171847438 171848726 171847798 Y PLD1,FNDC3B,FNDC3B NA NA NA NA NA FNDC3B 92020 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 172035782 172036031 172035880 Y FNDC3B NA NA NA NA NA FNDC3B 280364 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 172280796 172281206 172280981 Y TNFSF10,TNFSF10 NA NCEH1 IMR90 Hi-C 24141950 NCEH1 145802 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 172467147 172467552 172467259 Y NA NCEH1,ECT2,RNU4-4P NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 675 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 173650294 173650720 173650491 Y NA NA NA NA NA NA RP11-393N4.2 442314 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 177075253 177075542 177075439 Y NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 161992 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 178978348 178978737 178978528 Y PIK3CA,MFN1,GNB4 NA NA NA NA NA ZNF639 60042 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 179309053 179309431 179309273 Y NA ACTL6A,MRPL47,NDUFB5 NA NA NA NA MRPL47 11011 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 187904912 187905263 187905013 Y BCL6,BCL6 LPP,LPP-AS2 NA NA NA NA LPP-AS2 35067 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 189766714 189767004 189766859 Y NA NA NA NA NA NA LEPREL1 71222 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 190062904 190063381 190063085 Y LEPREL1,CLDN1,CLDN16 CLDN1 LEPREL1,CLDN1,CLDN16 IMR90 Hi-C 24141950 CLDN1 24640 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 190104242 190104447 190104367 Y NA NA NA NA NA NA CLDN1 65978 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 190335085 190335347 190335197 Y IL1RAP NA NA NA NA NA IL1RAP 105245 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 192605604 192605670 192605648 Y NA MB21D2 NA NA NA NA MB21D2 28280 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 193807302 193807696 193807488 Y ATP13A3,HES1 HES1 HES1,LOC100131551,LOC647323 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HES1 44238 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 193851636 193853009 193852912 Y ATP13A3,HES1 NA NA NA NA NA HES1 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 193859199 193859624 193859359 Y TMEM44 HES1 NA NA NA NA HES1 7265 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 194153543 194153935 194153911 Y ATP13A3 NA NA NA NA NA ATP13A3 63158 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 194298758 194299295 194298977 Y NA TMEM44-AS1 ATP13A3,FLJ34208 IMR90 Hi-C 24141950 TMEM44-AS1 3445 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 194561866 194562021 194561957 Y FAM43A NA LOC100507391,XXYLT1,ACAP2 IMR90 Hi-C 24141950 FAM43A 157244 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr3 197035558 197035706 197035585 Y NA DLG1 NA NA NA NA DLG1 11387 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 197036480 197036785 197036693 Y NA DLG1 NA NA NA NA DLG1 12309 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr3 197214864 197215009 197214889 Y NA NA DLG1,LOC100507086,BDH1,MFI2 IMR90 Hi-C 24141950 BDH1 83185 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 6887984 6888235 6888115 Y NA NA NA NA NA NA KIAA0232 106882 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 12642016 12642195 12642111 Y NA NA NA NA NA NA RAB28 841794 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 13908947 13909321 13909089 Y NA NA LOC441009,CPEB2,LOC152742 IMR90 Hi-C 24141950 RAB28 424958 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 15594702 15595080 15594956 Y FBXL5 NA NA NA NA NA FAM200B 86205 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 15895700 15895839 15895750 Y FGFBP1 FGFBP1 CC2D2A IMR90 Hi-C 24141950 FGFBP1 42524 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr4 15907638 15908044 15907859 Y FBXL5,BST1,FGFBP1 FGFBP1 BST1 IMR90 Hi-C 24141950 FGFBP1 30319 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr4 15915213 15915572 15915412 Y FGFBP1 FGFBP1 NA NA NA NA FGFBP1 22791 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 15922988 15923279 15923080 Y FGFBP1 FGFBP1 NA NA NA NA FGFBP1 15084 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 21785959 21786161 21786155 Y KCNIP4,KCNIP4,KCNIP4 NA NA NA NA NA GPR125 729516 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 24599702 24600087 24599863 Y NA DHX15 SOD3,CCDC149 IMR90 Hi-C 24141950 DHX15 15529 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 28460749 28460765 28460756 Y NA NA NA NA NA NA RP11-293A21.1 1600528 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 38162520 38162833 38162765 Y NA NA NA NA NA NA PTTG2 202464 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 38859134 38859762 38859410 Y KLF3,KLHL5,TLR1,TLR6 FAM114A1 NA NA NA NA FAM114A1 7536 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 40992630 40993044 40992776 Y APBB2 NA NA NA NA NA APBB2 223687 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 40994779 40995404 40995184 Y RBM47 NA NA NA NA NA APBB2 221327 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 41000829 41000972 41000906 Y RBM47 NA NA NA NA NA APBB2 215759 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 41936193 41936441 41936268 Y TMEM33 TMEM33 NA NA NA NA TMEM33 1056 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 58015152 58015220 58015173 Y SPINK2 IGFBP7 NA NA NA NA IGFBP7 40601 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 62068799 62069364 62069049 Y LPHN3 NA NA NA NA NA RP11-621K7.1 570204 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 66899965 66900079 66900021 Y NA NA NA NA NA NA RP11-396M11.1 57765 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 67430351 67431255 67431078 Y NA NA NA NA NA NA RP11-396M11.1 472507 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 67431681 67431779 67431730 Y NA NA NA NA NA NA RP11-396M11.1 473837 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 69219009 69219244 69219130 Y NA YTHDC1 NA NA NA NA YTHDC1 5202 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 70698476 70698796 70698636 Y UGT2A2 NA NA NA NA NA AMTN 683461 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 74472194 74472476 74472318 Y RASSF6,RASSF6 RASSF6 NA NA NA NA RASSF6 11872 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 74975298 74975961 74975834 Y CXCL1,AREG CXCL2,MTHFD2L RASSF6 IMR90 Hi-C 24141950 MTHFD2L 1930 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 74977575 74978125 74977847 Y NA CXCL2 RASSF6 IMR90 Hi-C 24141950 MTHFD2L 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 74982637 74982975 74982882 Y IL8,CXCL3,CXCL2,EREG,MTHFD2L CXCL2,MTHFD2L RASSF6,IL8,CXCL3,MTHFD2L,PF4,PPBPL2 IMR90 Hi-C 24141950 MTHFD2L 4746 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 75187079 75187238 75187159 Y EPGN EREG NA NA NA NA EREG 41622 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 75554137 75554451 75554233 Y NA NA EREG,MTHFD2L IMR90 Hi-C 24141950 EREG 325277 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 77511406 77511861 77511558 Y ANKRD56,SHROOM3 NA NA NA NA NA SHROOM3 157153 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 77545422 77545888 77545544 Y SCARB2 NA NA NA NA NA SHROOM3 191169 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr4 77724798 77724936 77724862 Y NA NA NA NA NA NA SEPT11 143920 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 77869090 77869312 77869177 Y NA SEPT11 NA NA NA NA SEPT11 234 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 77923148 77923272 77923214 Y CCNI NA NA NA NA NA SEPT11 54292 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 81048415 81048773 81048660 Y ANTXR2,PRDM8 ANTXR2 PAQR3,ANTXR2,PRDM8,FGF5 IMR90 Hi-C 24141950 ANTXR2 3807 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 81228486 81228584 81228534 Y NA FGF5 NA NA NA NA FGF5 42733 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 86683082 86683251 86683166 Y ARHGAP24 NA NA NA NA NA WDFY3 797538 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 89534713 89535020 89534799 Y PPM1K,HERC3 NA NA NA NA NA NAP1L5 82366 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 90212945 90213002 90212979 Y GPRIN3 NA NA NA NA NA NAP1L5 595559 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 99827146 99827610 99827384 Y NA EIF4E NA NA NA NA EIF4E 22178 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 108783895 108784172 108784033 Y SGMS2 SGMS2 NA NA NA NA SGMS2 40176 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr4 114355245 114355627 114355568 Y NA RNU1-138P NA NA NA NA RNU1-138P 15766 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 114367129 114367387 114367298 Y NA RNU1-138P NA NA NA NA RNU1-138P 27650 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 114389425 114389805 114389547 Y NA RNU1-138P NA NA NA NA RNU1-138P 49946 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 117519495 117520605 117520296 Y NA NA NA NA NA NA TRAM1L1 484131 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 119629667 119629850 119629760 Y NA METTL14 NA NA NA NA METTL14 25144 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 122611926 122612330 122612120 Y ANXA5 ANXA5 NA NA NA NA ANXA5 3938 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 125634465 125634726 125634691 Y NA ANKRD50 NA NA NA NA ANKRD50 2578 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 127699482 127699754 127699681 Y NA NA FAT4 IMR90 Hi-C 24141950 INTU 842672 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 129965980 129966229 129966106 Y NA C4orf33,SCLT1 NA NA NA NA C4orf33 46243 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 139156559 139157143 139156950 Y SLC7A11 SLC7A11 NA NA NA NA SLC7A11 4360 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 139251287 139251510 139251393 Y SLC7A11 NA NA NA NA NA SLC7A11 89784 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 143012897 143013276 143013057 Y NA NA NA NA NA NA IL15 457145 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 151146456 151146697 151146576 Y DCLK2 NA NA NA NA NA LRBA 788182 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 151201811 151202040 151201910 Y NA NA NA NA NA NA LRBA 732839 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 151641898 151642513 151641954 Y NA NA NA NA NA NA LRBA 292366 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 152033251 152033470 152033361 Y NA RPS3A NA NA NA NA RPS3A 14526 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 152246032 152246165 152246086 Y FAM160A1 SH3D19 FAM160A1 IMR90 Hi-C 24141950 SH3D19 1248 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 153717992 153718074 153718038 Y NA ARFIP1 NA NA NA NA ARFIP1 18903 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 154429389 154429734 154429551 Y NA KIAA0922 NA NA NA NA KIAA0922 43891 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 157863056 157863372 157863345 Y PDGFC PDGFC NA NA NA NA PDGFC 27174 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 157866755 157867028 157866930 Y NA PDGFC NA NA NA NA PDGFC 23518 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 157867687 157867968 157867878 Y NA PDGFC NA NA NA NA PDGFC 22578 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 157868046 157868334 157868214 Y NA PDGFC NA NA NA NA PDGFC 22212 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 157869778 157870097 157870082 Y NA PDGFC NA NA NA NA PDGFC 20449 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 159925060 159925429 159925240 Y FNIP2 NA NA NA NA NA FNIP2 236770 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 160519936 160519948 160519942 Y NA NA NA NA NA NA FNIP2 831646 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 160521424 160521676 160521556 Y NA NA NA NA NA NA FNIP2 833134 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 169408175 169408648 169408311 Y DDX60,DDX60L PALLD,DDX60L DDX60,DDX60L,PALLD IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PALLD 7569 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 169490335 169490520 169490463 Y PALLD DDX60L NA NA NA NA DDX60L 33398 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 169509077 169509260 169509148 Y NA NA NA NA NA NA DDX60L 52140 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 169559850 169560019 169559874 Y NA NA NA NA NA NA DDX60L 102913 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 181844755 181844937 181844843 Y NA NA NA NA NA NA AC108142.1 1219465 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 183161464 183161792 183161628 Y ODZ3 NA ODZ3 IMR90 Hi-C 24141950 AC108142.1 97062 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 183730445 183730610 183730498 Y NA NA NA NA NA NA DCTD 106479 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 184270914 184271169 184271084 Y NA NA CLDN24,CLDN22 IMR90 Hi-C 24141950 CDKN2AIP 92575 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr4 184391190 184391347 184391268 Y CDKN2AIP CDKN2AIP,ING2 CDKN2AIP IMR90 Hi-C 24141950 CDKN2AIP 27446 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 185609676 185609967 185609740 Y NA CASP3 NA NA NA NA CASP3 41013 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 186481104 186481365 186481225 Y NA NA PDLIM3,SORBS2 IMR90 Hi-C 24141950 CCDC110 90191 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr4 186842172 186842274 186842223 Y NA NA NA NA NA NA TLR3 146032 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 672861 673336 673024 Y NA NA NA NA NA NA CEP72 62474 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 784651 785023 784908 Y ZDHHC11,TPPP NA NA NA NA NA TRIP13 105735 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 1516282 1516761 1516468 Y SLC12A7,LPCAT1 LPCAT1 NA NA NA NA LPCAT1 5331 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 5340490 5340721 5340596 Y NA NA NA NA NA NA KIAA0947 78056 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 6712873 6713977 6713364 Y NA NA NA NA NA NA SRD5A1 81417 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr5 10422961 10423316 10423021 Y NA ROPN1L NA NA NA NA ROPN1L 16320 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 10551479 10551871 10551616 Y NA ANKRD33B MARCH6,ANKRD33B,ROPN1L IMR90 Hi-C 24141950 ANKRD33B 10571 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 10632197 10632744 10632366 Y NA NA NA NA NA NA ANKRD33B 69755 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 14037218 14037324 14037271 Y NA NA TRIO IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAH5 94566 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 14142332 14142650 14142445 Y NA TRIO NA NA NA NA TRIO 521 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 14174472 14174896 14174531 Y TRIO TRIO NA NA NA NA TRIO 32661 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 14185691 14186191 14185984 Y TRIO TRIO NA NA NA NA TRIO 43880 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 14268390 14268821 14268476 Y NA NA NA NA NA NA TRIO 126579 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 16492574 16492683 16492630 Y FAM134B ZNF622 NA NA NA NA ZNF622 28673 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 17187583 17188360 17188059 Y BASP1 NA NA NA NA NA BASP1 123876 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 25910581 25911176 25910785 Y NA NA NA NA NA NA RP11-549K20.1 721816 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 34564903 34565130 34565039 Y RAI14,RAI14 NA RAI14,TTC23L,RAD1,BRIX1 IMR90 Hi-C 24141950 RAI14 89212 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 34585438 34585952 34585758 Y RAI14,RAI14 NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 68390 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 34586139 34586737 34586416 Y NA NA RAI14 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RAI14 67605 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 38660472 38660667 38660594 Y LIFR NA EGFLAM,LIFR IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LIFR 54016 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 39158114 39158488 39158278 Y FYB NA NA NA NA NA RICTOR 85604 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 42994649 42995346 42995172 Y NA AC025171.1 NA NA NA NA AC025171.1 44331 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 43020158 43020617 43020275 Y C5orf28,ZNF131,C5orf39 AC025171.1,ZNF131,CTD-2201E18.3 NA NA NA NA AC025171.1 19060 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 43051482 43051716 43051600 Y NA AC025171.1,ZNF131,CTD-2201E18.3 NA NA NA NA ZNF131 11562 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 43061828 43062062 43061945 Y NA AC025171.1,ZNF131,CTD-2201E18.3 NA NA NA NA ZNF131 1216 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 54120977 54121197 54121092 Y NA NA SNX18 IMR90 Hi-C 24141950 ESM1 195302 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 54197279 54197516 54197431 Y NA NA SNX18,HSPB3,ARL15,CDC20B,GPX8,GZMK,CCNO,ESM1 IMR90 Hi-C 24141950 ESM1 118983 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 57076259 57076553 57076406 Y NA NA PLK2,GPBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPBP1 608484 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 58746343 58746348 58746346 Y PDE4D,PDE4D,PDE4D NA NA NA NA NA PLK2 992256 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 59041159 59041490 59041319 Y NA NA NA NA NA NA PDE4D 774457 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 59056590 59056824 59056644 Y NA NA NA NA NA NA PDE4D 759123 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 59086263 59086677 59086406 Y PDE4D NA NA NA NA NA PDE4D 729270 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr5 60597691 60598057 60597813 Y NA ZSWIM6 ZSWIM6,C5orf43 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZSWIM6 28043 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 60629089 60629454 60629159 Y NA ZSWIM6 NA NA NA NA ZSWIM6 2989 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 64328123 64328532 64328278 Y ADAMTS6 NA NA NA NA NA CWC27 265366 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 64495957 64496049 64496027 Y NA NA NA NA NA NA ADAMTS6 279698 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 64505244 64505511 64505327 Y ADAMTS6 NA NA NA NA NA ADAMTS6 270236 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 66502779 66503107 66502965 Y NA NA MAST4,CD180,PIK3R1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAST4 612603 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 67294770 67295126 67294965 Y PIK3R1 NA NA NA NA NA PIK3R1 214422 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 71424352 71424432 71424374 Y NA MAP1B NA NA NA NA MAP1B 23291 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 73611863 73612159 73611974 Y NA NA RGNEF,ENC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEXB 321689 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 73612322 73612454 73612340 Y NA NA RGNEF,ENC1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HEXB 321394 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 76086859 76087104 76086921 Y F2R,F2RL1 F2RL1 NCRUPAR,F2R,IQGAP2 IMR90 Hi-C 24141950 F2RL1 25654 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 76958449 76958840 76958645 Y NA WDR41 NA NA NA NA WDR41 44013 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 77765293 77765351 77765322 Y NA NA NA NA NA NA SCAMP1 110954 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 77814404 77814787 77814528 Y AP3B1,ARSB NA NA NA NA NA SCAMP1 160065 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 77822722 77823939 77823093 Y AP3B1,ARSB NA NA NA NA NA SCAMP1 168383 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 77830052 77831195 77830385 Y AP3B1,ARSB NA NA NA NA NA SCAMP1 175713 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 77837654 77837953 77837804 Y NA NA NA NA NA NA SCAMP1 183315 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 77890894 77891278 77891114 Y LHFPL2 NA NA NA NA NA LHFPL2 172566 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr5 78744780 78744887 78744834 Y NA NA NA NA NA NA RP11-342F17.2 78238 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 79428091 79428419 79428255 Y SERINC5 NA NA NA NA NA SERINC5 121479 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 81653126 81653457 81653257 Y RPS23 NA ATP6AP1L,XRCC4,VCAN IMR90 Hi-C 24141950 RPS23 80730 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 81692717 81693105 81692928 Y NA NA VCAN IMR90 Hi-C 24141950 RPS23 120321 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 81701396 81701769 81701673 Y NA NA VCAN IMR90 Hi-C 24141950 RPS23 129000 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 81702078 81702394 81702360 Y NA NA VCAN IMR90 Hi-C 24141950 RPS23 129682 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 81717066 81717283 81717174 Y NA NA VCAN,ATP6AP1L IMR90 Hi-C 24141950 RPS23 144670 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 82608517 82608916 82608727 Y TMEM167A,XRCC4,VCAN NA NA NA NA NA VCAN 156368 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 82769254 82769739 82769524 Y VCAN VCAN NA NA NA NA VCAN 3970 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 82769870 82770125 82769934 Y TMEM167A,VCAN VCAN NA NA NA NA VCAN 4586 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 82771448 82771603 82771549 Y NA VCAN NA NA NA NA VCAN 6164 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 83018086 83018575 83018426 Y NA NA NA NA NA NA VCAN 252802 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 83652187 83652571 83652379 Y EDIL3 CTD-2269F5.1,EDIL3 NA NA NA NA CTD-2269F5.1 25674 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 86298338 86298640 86298536 Y NA NA NA NA NA NA CTD-2161E19.1 119640 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 86417249 86417398 86417310 Y CCNH,CCNH NA MIR4280 K562 ChIA-PET 22265404 RASA1 144307 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 86417910 86418259 86418047 Y NA NA MIR4280 K562 ChIA-PET 22265404 RASA1 143446 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 88171082 88171456 88171409 Y MEF2C MEF2C NA NA NA NA MEF2C 26466 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95113820 95114121 95113969 Y NA GLRX NA NA NA NA GLRX 42588 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95202297 95202743 95202502 Y GLRX,ELL2 GLRX NA NA NA NA GLRX 45588 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95240158 95240487 95240414 Y NA NA NA NA NA NA ELL2 55288 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95403711 95404019 95403912 Y ELL2 NA ELL2,CAST,MIR583,C5orf27 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ELL2 107936 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95414896 95415105 95415065 Y GLRX,ELL2 NA NA NA NA NA ELL2 119121 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95555701 95555931 95555845 Y NA NA ELL2,RHOBTB3 IMR90 Hi-C 24141950 ELL2 259926 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 95873123 95873359 95873236 Y LNPEP,CAST,CAST CAST ELL2,PCSK1,CAST IMR90 Hi-C 24141950 CAST 14152 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 95901647 95901819 95901752 Y NA CAST PCSK1,CAST,ELL2,C5orf27,SPATA9 IMR90 Hi-C 24141950 CAST 42676 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 97446063 97446328 97446197 Y NA NA FLJ35946,RGMB IMR90 Hi-C 24141950 CH17-12M21.1 226120 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 97645408 97646168 97645558 Y RGMB CH17-12M21.1 RGMB,FLJ35946 IMR90 Hi-C 24141950 CH17-12M21.1 26280 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 97650049 97650331 97650134 Y RGMB CH17-12M21.1 RGMB,FLJ35946 IMR90 Hi-C 24141950 CH17-12M21.1 22117 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 97750593 97751065 97750933 Y RGMB NA RGMB,FLJ35946 IMR90 Hi-C 24141950 CH17-12M21.1 78145 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 99382569 99383254 99382906 Y NA NA NA NA NA NA FAM174A 485755 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 99387251 99388845 99388529 Y NA NA NA NA NA NA FAM174A 480164 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 102091646 102092087 102091846 Y NA PAM NA NA NA NA PAM 3961 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr5 106823409 106823505 106823457 Y NA NA NA NA NA NA EFNA5 181091 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 107795519 107795743 107795631 Y NA NA NA NA NA NA FBXL17 79720 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 108749637 108749884 108749767 Y NA PJA2 NA NA NA NA PJA2 5942 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 111265612 111266415 111266277 Y NA NA NA NA NA NA EPB41L4A-AS1 227808 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 111286612 111286649 111286638 Y NA NA NA NA NA NA EPB41L4A-AS1 207574 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 112218687 112219263 112218745 Y APC SRP19,REEP5 NA NA NA NA SRP19 23768 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 112825129 112825430 112825300 Y NA MCC,YTHDC2 NA NA NA NA MCC 2602 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 114970299 114970641 114970577 Y NA TMED7-TICAM2,TICAM2,TMED7 NA NA NA NA TMED7 3610 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 115374685 115374950 115374799 Y LOC644100 CTD-2287O16.1,COMMD10 NA NA NA NA CTD-2287O16.1 11036 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 115719103 115719184 115719144 Y NA NA NA NA NA NA CTB-118N6.1 177074 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 115855956 115855969 115855965 Y NA CTB-118N6.1 NA NA NA NA CTB-118N6.1 40289 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 117774677 117774715 117774696 Y NA NA NA NA NA NA PTMAP2 532776 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 118257403 118257748 118257576 Y NA PTMAP2 NA NA NA NA PTMAP2 49743 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 119837700 119837812 119837711 Y PRR16 PRR16 NA NA NA NA PRR16 39727 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 123935187 123935581 123935384 Y NA NA ZNF608 IMR90 Hi-C 24141950 RP11-436H11.1 207345 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 123987356 123987539 123987440 Y ZNF608 NA NA NA NA NA RP11-436H11.1 155387 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 123997171 123997561 123997207 Y ZNF608 NA NA NA NA NA RP11-436H11.1 145365 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 125730040 125730374 125730276 Y C5orf48,ALDH7A1,GRAMD3,GRAMD3 GRAMD3 NA NA NA NA GRAMD3 36216 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 130971517 130972046 130971999 Y NA RAPGEF6 NA NA NA NA RAPGEF6 2588 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 131422074 131422446 131422224 Y NA NA NA NA NA NA PDLIM4 168918 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 131434793 131435181 131435055 Y RAPGEF6,FNIP1,IRF1,IL3,CSF2 NA PDLIM4,IL3 IMR90 Hi-C 24141950 PDLIM4 156183 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 131601385 131601782 131601639 Y P4HA2 PDLIM4,SLC22A4,P4HA2 NA NA NA NA PDLIM4 10021 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 131832561 131832909 131832704 Y AFF4,SLC22A4,IRF1 IRF1 IRF1 IMR90 Hi-C 24141950 IRF1 8071 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 131833441 131833717 131833513 Y IRF1 IRF1 IRF1 IMR90 Hi-C 24141950 IRF1 8951 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 132323487 132323535 132323508 Y NA AFF4,ZCCHC10 NA NA NA NA AFF4 26161 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 134259128 134259903 134259220 Y NA PCBD2,MTND6P4,MTND5P11,MTND4P12,MIR4461 NA NA NA NA MTND5P11 246 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 134261311 134262635 134261858 Y NA PCBD2,MTND6P4,MTND5P11 NA NA NA NA MTND4P12,MIR4461 0 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 134405285 134405568 134405423 Y NA PITX1 H2AFY IMR90 Hi-C 24141950 PITX1 36782 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135330774 135331163 135330964 Y NA TGFBI TGFBI,VTRNA2-1,LECT2,SMAD5 IMR90 Hi-C 24141950 TGFBI 31421 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 135335114 135335504 135335269 Y NA TGFBI TGFBI,VTRNA2-1,FBXL21 IMR90 Hi-C 24141950 TGFBI 27080 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135341804 135342193 135341990 Y FBXL21,TGFBI TGFBI TGFBI,VTRNA2-1,FBXL21 IMR90 Hi-C 24141950 TGFBI 20391 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135342387 135342803 135342527 Y TGFBI TGFBI TGFBI,VTRNA2-1,FBXL21 IMR90 Hi-C 24141950 TGFBI 19781 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135347789 135348106 135347904 Y NA TGFBI VTRNA2-1,TGFBI IMR90 Hi-C 24141950 TGFBI 14478 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135353008 135353244 135353057 Y NA TGFBI VTRNA2-1,TGFBI IMR90 Hi-C 24141950 TGFBI 9340 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135356057 135356513 135356322 Y NA TGFBI VTRNA2-1,TGFBI,FBXL21,LECT2,SMAD5 IMR90 Hi-C 24141950 TGFBI 6071 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135372729 135373019 135372874 Y NA TGFBI NA NA NA NA TGFBI 10145 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135373156 135373467 135373188 Y NA TGFBI NA NA NA NA TGFBI 10572 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 135416297 135416409 135416350 Y NA NA NA NA NA NA SMAD5 50125 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 136450174 136450503 136450334 Y NA NA NA NA NA NA SPOCK1 481565 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 136478407 136478752 136478599 Y NA NA NA NA NA NA SPOCK1 453316 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 136482104 136482426 136482383 Y SPOCK1 NA NA NA NA NA SPOCK1 449642 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr5 138277949 138278244 138278038 Y NA NA NA NA NA NA MATR3 329197 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 139691635 139691999 139691907 Y HBEGF PFDN1,HBEGF NA NA NA NA PFDN1 10929 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 140090601 140091006 140090806 Y NA WDR55,HARS2,HARS,ZMAT2,VTRNA1-1 NA NA NA NA VTRNA1-1 1741 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 140098281 140098628 140098472 Y NA HARS2,HARS,ZMAT2,VTRNA1-1 NA NA NA NA VTRNA1-1 9421 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 141404371 141404781 141404694 Y DIAPH1,FCHSD1 GNPDA1 GNPDA1,NDFIP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GNPDA1 13765 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 141736379 141736797 141736670 Y ARHGAP26 AC005592.2,SPRY4 NDFIP1,FGF1,SPRY4,GNPDA1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SPRY4 32359 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 142221928 142222177 142222053 Y ARHGAP26 NA NA NA NA NA ARHGAP26 73979 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 142819954 142820205 142820015 Y NA NR3C1 NA NA NA NA NR3C1 6877 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 142916050 142916194 142916130 Y NA NA ARHGAP26,NR3C1 IMR90 Hi-C 24141950 NR3C1 102973 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 145827727 145827826 145827802 Y NA TCERG1 GPR151 IMR90 Hi-C 24141950 TCERG1 2853 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 146378574 146378711 146378699 Y NA NA NA NA NA NA STK32A 233815 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 148172345 148172765 148172447 Y FBXO38,ADRB2 ADRB2 SH3TC2,ADRB2,ABLIM3 IMR90 Hi-C 24141950 ADRB2 31391 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 148515213 148515594 148515276 Y ABLIM3 ABLIM3 ABLIM3,AFAP1L1,ADRB2,SH3TC2 IMR90 Hi-C 24141950 ABLIM3 3452 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 149317888 149318128 149317985 Y CSNK1A1,CD74,CD74,SLC26A2,HMGXB3 SLC26A2 NA NA NA NA SLC26A2 20172 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 149318595 149318961 149318771 Y CSNK1A1,CD74,CD74,SLC26A2,HMGXB3 SLC26A2 NA NA NA NA SLC26A2 19339 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 149320953 149321167 149320973 Y NA SLC26A2 NA NA NA NA SLC26A2 17133 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 151078700 151079028 151078874 Y ATOX1,SPARC SPARC SPARC,ATOX1 IMR90 Hi-C 24141950 SPARC 13974 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 151119916 151120243 151119990 Y NA G3BP1,ATOX1 SPARC IMR90 Hi-C 24141950 G3BP1 28363 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 154062607 154063000 154062805 Y GEMIN5 LARP1 LARP1,C5orf4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LARP1 27462 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 156471573 156471840 156471835 Y NA NA NA NA NA NA HAVCR2 96040 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 159402452 159402764 159402629 Y NA TTC1 NA NA NA NA TTC1 31356 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 159933720 159933957 159933888 Y PWWP2A,SLU7 NA NA NA NA NA PTTG1 86891 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 167372516 167372785 167372694 Y NA NA NA NA NA NA WWC1 343871 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 167741798 167742197 167741960 Y WWC1 WWC1 NA NA NA NA WWC1 25142 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 168221385 168221766 168221495 Y NA NA NA NA NA NA CTC-575D19.1 180068 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 168229147 168229460 168229328 Y NA NA NA NA NA NA CTC-575D19.1 187830 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 169404223 169404546 169404350 Y FAM196B FAM196B NA NA NA NA FAM196B 1198 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 169998509 169998839 169998651 Y NA NA NA NA NA NA FAM196B 592765 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr5 171581047 171581366 171581364 Y NA STK10 NA NA NA NA STK10 32024 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 171702162 171702431 171702281 Y DUSP1,UBTD2,STK10 UBTD2 NA NA NA NA UBTD2 6644 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 172160417 172160946 172160788 Y ATP6V0E1 DUSP1 ERGIC1,ATP6V0E1,C5orf41,DUSP1,NEURL1B,BNIP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP1 35252 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr5 172167900 172168183 172168030 Y UBTD2,DUSP1 DUSP1 ERGIC1,DUSP1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP1 28015 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 172193800 172194232 172193914 Y UBTD2,ERGIC1,C5orf41,DUSP1 DUSP1 NA NA NA NA DUSP1 1966 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 172198749 172199959 172199636 Y UBTD2,ERGIC1,C5orf41,DUSP1 DUSP1 NA NA NA NA DUSP1 2551 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 172226784 172227709 172227394 Y ERGIC1,C5orf41,DUSP1 DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP1 30586 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr5 172234136 172234644 172234380 Y NA DUSP1,ERGIC1 DUSP1,ERGIC1,LOC100268168,RPL26L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ERGIC1 24634 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 172370220 172370579 172370385 Y ERGIC1,ATP6V0E1 RPL26L1,ATP6V0E1 NA NA NA NA RPL26L1 13153 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 173031200 173031306 173031275 Y NA BOD1 NA NA NA NA BOD1 10357 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 173765324 173765497 173765445 Y MSX2 RP11-267A15.1 HMP19,MIR4634,MSX2,FLJ16171 IMR90 Hi-C 24141950 RP11-267A15.1 4026 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 176359562 176359884 176359876 Y RNF44,UIMC1,UIMC1,UIMC1,NSD1,GRK6 NA NA NA NA NA UIMC1 87750 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 178259703 178260206 178260005 Y ZNF879 ZNF354B,RNU1-39P ZNF879,AGXT2L2,GRM6,COL23A1 IMR90 Hi-C 24141950 ZNF354B 24748 CAGE SK-OV-3-R hg19 FANTOM5 8.18663197753019 chr5 179532958 179533118 179533038 Y NA RNF130 NA NA NA NA RNF130 35840 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 180541875 180541994 180541989 Y OR2Y1 NA BTNL8,MGAT1 IMR90 Hi-C 24141950 CTC-338M12.5 74930 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 180611137 180611357 180611292 Y MGAT1 CTC-338M12.5,TRIM7,TRIM41 NA NA NA NA CTC-338M12.5 5567 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr5 180634441 180634803 180634658 Y NA CTC-338M12.5,TRIM7,TRIM41,GNB2L1 NA NA NA NA TRIM7 4148 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 293338 293822 293579 Y NA DUSP22 NA NA NA NA DUSP22 3708 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 1953013 1953362 1953197 Y NA NA NA NA NA NA GMDS 290564 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 2377151 2377429 2377354 Y NA NA NA NA NA NA GMDS 133225 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 2684459 2684567 2684519 Y SERPINB9,SERPINB1,NQO2 NA NA NA NA NA C6orf195 51622 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 2868839 2869182 2869098 Y SERPINB9,RIPK1,NQO2,SERPINB1 SERPINB1,SERPINB9 NA NA NA NA SERPINB1 28599 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 3254273 3254642 3254472 Y SLC22A23 PSMG4,TUBB2B NA NA NA NA TUBB2B 24309 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 3826272 3826513 3826435 Y C6orf145 FAM50B SLC22A23,TUBB2B IMR90 Hi-C 24141950 FAM50B 21107 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 4352111 4352211 4352192 Y CDYL NA CDYL,RPP40 IMR90 Hi-C 24141950 ECI2 218280 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 4358823 4359231 4358978 Y CDYL NA CDYL,RPP40 IMR90 Hi-C 24141950 ECI2 224992 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 4488861 4489056 4488922 Y NA NA CDYL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDYL 215337 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 6008887 6009261 6009138 Y NRN1 NRN1 NA NA NA NA NRN1 3687 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 6687140 6687567 6687361 Y NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 RREB1 418263 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 10441526 10441791 10441655 Y TMEM14C,TMEM14B,PAK1IP1,GCNT2,TFAP2A,TFAP2A,TFAP2A TFAP2A,GCNT2 NA NA NA NA TFAP2A 23634 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11263609 11264019 11263885 Y NA NA NA NA NA NA NEDD9 116562 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11318376 11319012 11318732 Y TMEM170B,MAK,LOC221710,NEDD9,NEDD9 NA NA NA NA NA NEDD9 61569 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr6 11607697 11608051 11607761 Y NA NA TMEM170B,HIVEP1 IMR90 Hi-C 24141950 NEDD9 227116 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr6 11609469 11609947 11609818 Y NA NA HIVEP1,EDN1,ADTRP IMR90 Hi-C 24141950 NEDD9 228888 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11615625 11615765 11615678 Y NA NA HIVEP1,EDN1,ADTRP IMR90 Hi-C 24141950 NEDD9 235044 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr6 11650418 11650889 11650652 Y NA NA HIVEP1,EDN1,ADTRP IMR90 Hi-C 24141950 NEDD9 269837 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11713061 11713450 11713265 Y NEDD9,NEDD9,TMEM170B,HIVEP1 NA NA NA NA NA HIVEP1 293545 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11732067 11732789 11732417 Y NEDD9,NEDD9,TMEM170B,HIVEP1 NA NA NA NA NA HIVEP1 274206 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11769423 11769725 11769659 Y HIVEP1 NA NA NA NA NA HIVEP1 237270 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr6 11772710 11773287 11772940 Y NEDD9,TMEM170B,HIVEP1 NA NA NA NA NA HIVEP1 233708 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 11834601 11834816 11834711 Y NA NA ADTRP,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 172179 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 12233796 12234233 12233926 Y HIVEP1,EDN1 NA TMEM170B,ADTRP,HIVEP1 IMR90 Hi-C 24141950 EDN1 54363 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 12573441 12573699 12573559 Y NA NA EDN1,TMEM170B IMR90 Hi-C 24141950 RPL15P3 61099 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 13391107 13391478 13391293 Y NA NA NA NA NA NA TBC1D7 64292 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14640701 14640843 14640773 Y NA NA JARID2 IMR90 Hi-C 24141950 JARID2 603684 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14706582 14707144 14706813 Y NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 537383 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14713126 14713654 14713380 Y NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 530873 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14728163 14728500 14728264 Y NA NA DTNBP1,JARID2 IMR90 Hi-C 24141950 JARID2 516027 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14732820 14733791 14733202 Y NA NA DTNBP1,JARID2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 510736 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 14733801 14734229 14733883 Y NA NA DTNBP1,JARID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 510298 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14735052 14735658 14735282 Y NA NA DTNBP1,JARID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 508869 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14744083 14744613 14744392 Y NA NA JARID2 IMR90 Hi-C 24141950 JARID2 499914 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14758684 14758801 14758713 Y JARID2 NA JARID2 IMR90 Hi-C 24141950 JARID2 485726 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 14777704 14777964 14777898 Y JARID2 NA JARID2 IMR90 Hi-C 24141950 JARID2 466563 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 15526544 15526623 15526553 Y NA NA NA NA NA NA DTNBP1 134666 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 16215873 16216103 16215954 Y MYLIP NA GMPR,JARID2,DTNBP1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MYLIP 88517 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 16713666 16713734 16713668 Y ATXN1 RP1-151F17.1,ATXN1 NA NA NA NA RP1-151F17.1 45635 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 17016303 17016440 17016335 Y NA NA ATXN1,GMPR IMR90 Hi-C 24141950 ATXN1 256581 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 17418097 17418389 17418210 Y NA CAP2 NA NA NA NA CAP2 26650 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 21587723 21589288 21589205 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 2684 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 21987708 21987959 21987863 Y NA NA NA NA NA NA SOX4 395736 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 22073995 22074367 22074183 Y NA NA NA NA NA NA SOX4 482023 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr6 24323980 24324360 24324286 Y DCDC2,KAAG1,DCDC2 DCDC2 NA NA NA NA DCDC2 31920 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 24348668 24348920 24348794 Y DCDC2,KAAG1,DCDC2 DCDC2 NA NA NA NA DCDC2 7360 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 25992254 25993073 25992840 Y NA TRIM38,HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2 NA NA NA NA HIST1H1A 22967 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 27156271 27156423 27156401 Y NA HIST1H2BK,HIST1H2AH,RP11-209A2.1 HIST1H2BO,HIST1H2AM,OR2B2,LOC100507173,HIST1H4J,HIST1H3J,HIST1H2BK,MIR3143,HIST1H2AH,HIST1H2AI,HIST1H3H,HIST1H2BL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RP11-209A2.1 20600 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 28072476 28072872 28072543 Y HIST1H4K,HIST1H2AK,ZNF165,ZSCAN16,ZNF192 ZSCAN16 NA NA NA NA ZSCAN16 17466 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 28099505 28099599 28099552 Y OR2B2,OR2B6,ZNF187,ZSCAN16 ZSCAN16,ZNF192P1 NA NA NA NA ZSCAN16 9167 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 30069810 30070038 30069951 Y HLA-E,ABCF1,HLA-F,LOC554223,HLA-G,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,RNF39,RNF39 ZNRD1,ZNRD1-AS1,PPP1R11 NA NA NA NA PPP1R11 37324 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 30649746 30650798 30650074 Y TRIM26,TRIM39,TRIM39,TRIM39-RPP21,HLA-E,IER3,FLOT1,PPP1R10,KIAA1949,KIAA1949 C6orf136,DHX16,PPP1R18,NRM,MDC1,TUBB NA NA NA NA PPP1R18 2874 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 30716024 30716359 30716084 Y HLA-E,PPP1R10,KIAA1949,KIAA1949,IER3 MDC1,TUBB,FLOT1,IER3 PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1 IMR90 Hi-C 24141950 IER3 5693 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 30716597 30717062 30716912 Y IER3 MDC1,TUBB,FLOT1,IER3 PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1 IMR90 Hi-C 24141950 IER3 6266 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 30720004 30720713 30720325 Y TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3 MDC1,TUBB,FLOT1,IER3 DPCR1,NRM,PPP1R18,MDC1,FLOT1,IER3,C6orf136,DHX16,DDR1,VARS2,SFTA2,CCHCR1,PSORS1C1,PSORS1C2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 IER3 9673 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 31529822 31530211 31530167 Y HLA-B,STK19,HSPA1B,TNF,LST1 DDX39B,NFKBIL1,TNF NA NA NA NA TNF 11133 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 31789672 31790268 31789876 Y NA VARS,LSM2,HSPA1A,HSPA1B,C6orf48,NEU1 NA NA NA NA HSPA1B 3244 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 37102324 37102775 37102642 Y NA PIM1 PIM1,CPNE5,TMEM217,PPIL1,MIR3925,C6orf89,FGD2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 33204 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 37104908 37105418 37105405 Y NA PIM1 PIM1,CPNE5,TMEM217,PPIL1,C6orf89,FGD2,TBC1D22B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIM1 30561 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 37522898 37523251 37523222 Y NA NA NA NA NA NA CCDC167 57200 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 39393880 39394120 39394000 Y NA NA NA NA NA NA KCNK5 198654 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 40215028 40215342 40215185 Y NA NA KIF6 IMR90 Hi-C 24141950 RP1-278E11.3 290456 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 42283764 42284050 42283900 Y NA NA NA NA NA NA MRPS10 100161 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 43977606 43978027 43977822 Y NA C6orf223 NA NA NA NA C6orf223 11289 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 44024667 44024914 44024806 Y SLC35B2 NA RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C6orf223 58350 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 44025238 44025386 44025330 Y NFKBIE,MAD2L1BP NA RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C6orf223 58921 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 44458019 44458222 44458132 Y NA NA SUPT3H,RUNX2,CLIC5 IMR90 Hi-C 24141950 CDC5L 104757 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 45391331 45391628 45391429 Y RUNX2 SUPT3H NA NA NA NA SUPT3H 47641 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 45413515 45413853 45413708 Y RUNX2 NA NA NA NA NA SUPT3H 69825 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 45618234 45618676 45618425 Y RUNX2 NA RUNX2,SUPT3H,CLIC5 IMR90 Hi-C 24141950 SUPT3H 274544 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr6 45633739 45634017 45633866 Y NA NA RUNX2 IMR90 Hi-C 24141950 SUPT3H 290049 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 45665421 45665594 45665503 Y NA NA RUNX2,CDC5L,CLIC5 IMR90 Hi-C 24141950 SUPT3H 321731 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 47831581 47831627 47831604 Y NA NA NA NA NA NA GPR111 209409 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 48794608 48794845 48794713 Y NA NA NA NA NA NA MUT 634059 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 49533704 49534052 49533813 Y C6orf141 NA NA NA NA NA CENPQ 104613 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 52460126 52460529 52460233 Y TRAM2 TRAM2 EFHC1,TRAM2,MCM3,ICK,LOC730101 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TRAM2 20413 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 53167531 53167800 53167691 Y NA ELOVL5 NA NA NA NA ELOVL5 44147 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 56578288 56578394 56578341 Y NA NA DST IMR90 Hi-C 24141950 BEND6 239379 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 73867627 73867898 73867877 Y NA NA NA NA NA NA KHDC1 150190 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 74289769 74290568 74290415 Y MB21D1,SLC17A5,CD109,CD109,EEF1A1 NA NA NA NA NA EEF1A1 58249 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 81550162 81550525 81550226 Y NA NA NA NA NA NA BCKDHB 735798 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 86113432 86113601 86113525 Y NT5E NT5E NT5E,SNX14 IMR90 Hi-C 24141950 NT5E 44208 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 86114496 86114829 86114663 Y NT5E NT5E NT5E,SNX14 IMR90 Hi-C 24141950 NT5E 42980 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr6 86174491 86174911 86174693 Y NA NT5E NA NA NA NA NT5E 16682 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 99901572 99901766 99901669 Y NA RP11-98I9.4,PNISR NA NA NA NA PNISR 30365 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 105907845 105908047 105907966 Y NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PREP 58886 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 108879521 108879931 108879808 Y SESN1,FOXO3,FOXO3 FOXO3 NA NA NA NA FOXO3 483 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 109218749 109218814 109218782 Y NA RP11-249L21.4 NA NA NA NA RP11-249L21.4 8262 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 109269728 109269873 109269801 Y NA RP11-249L21.4 SESN1 IMR90 Hi-C 24141950 RP11-249L21.4 42652 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 110094407 110094557 110094483 Y NA NA NA NA NA NA FIG4 83908 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 110502951 110503352 110503102 Y FIG4,CDC40 WASF1,CDC40 NA NA NA NA CDC40 3607 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 111265873 111266130 111266017 Y SLC16A10,AMD1,AMD1 GTF3C6,RPF2 CDK19,AMD1,SLC22A16 IMR90 Hi-C 24141950 GTF3C6 11633 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr6 113673815 113673995 113673934 Y NA NA LAMA4,FLJ34503,MARCKS IMR90 Hi-C 24141950 MARCKS 502546 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 113772353 113772409 113772395 Y NA NA MARCKS,FLJ34503 IMR90 Hi-C 24141950 MARCKS 404132 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 115795867 115795888 115795877 Y NA NA NA NA NA NA FRK 584033 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 116745242 116745485 116745336 Y ZUFSP,DSE,FAM26F NA NA NA NA NA RWDD1 145045 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 117804575 117804878 117804739 Y NA DCBLD1 NA NA NA NA DCBLD1 31595 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 118896988 118897011 118897000 Y NA NA NA NA NA NA CEP85L 132227 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 121758280 121758805 121758450 Y GJA1 GJA1 NA NA NA NA GJA1 3442 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 121843500 121843932 121843669 Y GJA1 NA GJA1 IMR90 Hi-C 24141950 GJA1 88662 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 123111983 123112340 123112183 Y PKIB,SMPDL3A SMPDL3A NA NA NA NA SMPDL3A 3668 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 127892310 127892704 127892511 Y NA NA NA NA NA NA RP3-403A15.1 137529 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 128607751 128608140 128608092 Y NA NA NA NA NA NA PTPRK 231730 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 128747260 128747445 128747404 Y NA NA NA NA NA NA PTPRK 92425 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 128921613 128921847 128921739 Y NA NA PTPRK MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTPRK 81743 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 130513480 130513753 130513616 Y NA NA NA NA NA NA L3MBTL3 180636 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 132057565 132057807 132057687 Y NA NA NA NA NA NA ENPP1 69349 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 134741718 134742020 134741875 Y SGK1,SGK1,SGK1 NA SGK1,LOC154092,ALDH8A1 IMR90 Hi-C 24141950 SGK1 104468 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 134742048 134742399 134742278 Y SGK1,SGK1 NA SGK1,LOC154092,ALDH8A1 IMR90 Hi-C 24141950 SGK1 104798 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 136227219 136227382 136227241 Y NA NA NA NA NA NA PDE7B 56385 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 137678748 137679081 137678969 Y NA NA NA NA NA NA IFNGR1 140162 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 138552516 138552583 138552548 Y NA NA NA NA NA NA PERP 125868 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 141300848 141301178 141301014 Y NA NA NA NA NA NA VTA1 1165189 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 142335769 142335959 142335859 Y NA NA NA NA NA NA VTA1 130408 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 143154152 143154557 143154355 Y HIVEP2 NA NA NA NA NA HIVEP2 109781 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 143171849 143172301 143172148 Y HIVEP2 NA NA NA NA NA HIVEP2 92037 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 143192899 143193375 143193200 Y HIVEP2 NA NA NA NA NA HIVEP2 70963 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 143206296 143206927 143206703 Y HIVEP2 NA NA NA NA NA HIVEP2 57411 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 143223836 143224147 143224035 Y HIVEP2 HIVEP2 NA NA NA NA HIVEP2 40191 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr6 143247398 143248213 143248022 Y HIVEP2 HIVEP2 NA NA NA NA HIVEP2 16125 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 147235088 147235549 147235197 Y RAB32,STXBP5 NA NA NA NA NA STXBP5 288012 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 149382626 149382831 149382713 Y NA NA NA NA NA NA TAB2 154946 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 149400726 149401123 149400736 Y NA NA NA NA NA NA TAB2 136654 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 150010989 150011176 150011138 Y NA KATNA1,LATS1 NA NA NA NA LATS1 26216 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 151178746 151179109 151178841 Y NA MTHFD1L NA NA NA NA MTHFD1L 5576 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 151366985 151367228 151367157 Y NA NA NA NA NA NA RP1-292B18.1 51437 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 151381285 151381592 151381452 Y NA RP1-292B18.1 NA NA NA NA RP1-292B18.1 37073 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 155850166 155850642 155850364 Y NA NA NA NA NA NA TFB1M 216539 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 156571786 156572058 156571922 Y NA NA NA NA NA NA ARID1B 525005 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 157342507 157343524 157343342 Y ARID1B,ZDHHC14 NA NA NA NA NA ARID1B 245444 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 158179542 158179858 158179826 Y SNX9 NA SNX9,ZDHHC14,TMEM242,SYNJ2,SERAC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SNX9 62438 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 158254729 158255396 158255020 Y NA SNX9 NA NA NA NA SNX9 12433 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 158452388 158452885 158452569 Y SNX9 NA NA NA NA NA SYNJ2 51500 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 158478416 158478907 158478642 Y NA NA NA NA NA NA SYNJ2 77528 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 158481547 158481708 158481650 Y SNX9 NA NA NA NA NA SYNJ2 80659 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 158525965 158526121 158526043 Y NA NA NA NA NA NA SERAC1 61191 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 158981403 158981866 158981661 Y NA NA NA NA NA NA DYNLT1 81905 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 159141436 159141829 159141621 Y TAGAP,DYNLT1,SYTL3,C6orf99,EZR,EZR NA NA NA NA NA SYTL3 72390 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr6 159195572 159195684 159195582 Y TAGAP,SYTL3,EZR,EZR EZR NA NA NA NA EZR 42760 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 159271429 159272000 159271674 Y TAGAP,SYTL3,EZR,EZR EZR NA NA NA NA EZR 32985 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr6 159273925 159274893 159274526 Y TAGAP,SYTL3,EZR,EZR EZR NA NA NA NA EZR 35481 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 159284894 159285253 159285074 Y NA EZR OSTCP1 K562 ChIA-PET 22265404 EZR 46450 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 159890219 159890368 159890294 Y NA NA FNDC1 IMR90 Hi-C 24141950 WTAP 254249 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 160411002 160411087 160411045 Y SOD2,WTAP,WTAP,MAS1 IGF2R NA NA NA NA IGF2R 22871 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr6 161607618 161607817 161607715 Y AGPAT4 NA NA NA NA NA AGPAT4 85276 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 161646912 161646998 161646955 Y NA AGPAT4 NA NA NA NA AGPAT4 46095 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 161678868 161678882 161678875 Y NA AGPAT4 MAP3K4 IMR90 Hi-C 24141950 AGPAT4 14211 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 161838884 161839117 161839007 Y NA NA NA NA NA NA AGPAT4 145791 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr6 161864912 161865081 161864974 Y AGPAT4 NA NA NA NA NA AGPAT4 171819 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 163881453 163881850 163881463 Y NA QKI NA NA NA NA QKI 48421 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 164535814 164535945 164535880 Y NA NA NA NA NA NA QKI 702782 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 166422302 166422862 166422743 Y NA PDE10A NA NA NA NA PDE10A 24211 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 166967000 166967189 166967118 Y NA NA NA NA NA NA SFT2D1 212921 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 166970262 166970784 166970543 Y NA NA NA NA NA NA SFT2D1 216183 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr6 170491997 170492052 170492021 Y NA NA NA NA NA NA FAM120B 105739 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 1572262 1572844 1572636 Y ZFAND2A,MAFK INTS1,MAFK,PSMG3 NA NA NA NA MAFK 3912 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 1573524 1573718 1573598 Y ZFAND2A,MAFK INTS1,MAFK,PSMG3 NA NA NA NA MAFK 5174 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 1970944 1971123 1971068 Y NA NA NA NA NA NA MAD1L1 299755 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 4764796 4765177 4765030 Y KIAA0415 NA NA NA NA NA FOXK1 83408 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 5731889 5732558 5731976 Y CCZ1 NA NA NA NA NA RNF216 86812 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 7984284 7984579 7984481 Y GLCCI1 GLCCI1 RPA3,LOC729852 IMR90 Hi-C 24141950 GLCCI1 21846 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 13818689 13818849 13818801 Y ETV1 NA NA NA NA NA ETV1 210201 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 16707771 16707941 16707875 Y NA ANKMY2,BZW2 NA NA NA NA BZW2 24015 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 20239036 20239390 20239182 Y TWISTNB NA NA NA NA NA RPL21P75 198690 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 20414219 20414454 20414223 Y NA NA NA NA NA NA RPL21P75 373873 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 22616988 22617783 22617407 Y IL6 NA NA NA NA NA EEF1A1P6 67370 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 22757674 22758207 22757934 Y NA IL6 NA NA NA NA IL6 5296 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 24229401 24229422 24229412 Y NA NA NA NA NA NA MPP6 381465 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 24861129 24861331 24861204 Y C7orf31,DFNA5 NA NA NA NA NA DFNA5 53885 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 27156534 27156699 27156617 Y HOXA3 HOTAIRM1,HOXA1 NA NA NA NA HOXA1 22919 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 28076890 28077172 28076964 Y CREB5 NA NA NA NA NA JAZF1 141190 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 30387689 30388072 30387783 Y NOD1,ZNRF2 AC006978.6 NA NA NA NA AC006978.6 20915 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 35075861 35076697 35076367 Y NA NA NA NA NA NA DPY19L2P1 147237 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 36785983 36786266 36786088 Y AOAH NA AOAH IMR90 Hi-C 24141950 KIAA0895 358249 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 37731277 37731583 37731449 Y GPR141,STARD3NL,ELMO1,ELMO1 EPDR1 NA NA NA NA EPDR1 9831 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 39629281 39629774 39629554 Y RALA YAE1D1,RALA NA NA NA NA YAE1D1 25306 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 39632170 39632581 39632314 Y RALA YAE1D1,RALA NA NA NA NA YAE1D1 28195 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 39644763 39645050 39644891 Y RALA YAE1D1,RALA LINC00265 IMR90 Hi-C 24141950 RALA 16032 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 39661364 39661771 39661496 Y NA RALA NA NA NA NA RALA 282 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 39661947 39662014 39661981 Y NA RALA NA NA NA NA RALA 865 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 42174635 42174902 42174765 Y NA NA NA NA NA NA GLI3 100567 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 43625293 43625372 43625313 Y URGCP,STK17A STK17A NA NA NA NA STK17A 4936 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 43658377 43658532 43658408 Y POLM,STK17A,URGCP STK17A NA NA NA NA STK17A 38020 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 47514732 47515208 47514929 Y TNS3 NA NA NA NA NA TNS3 104948 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 50615386 50615579 50615483 Y GRB10 NA NA NA NA NA FIGNL1 99298 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 55141624 55142112 55141893 Y SEC61G,EGFR NA NA NA NA NA EGFR 56910 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 55146809 55147410 55146997 Y NA NA NA NA NA NA EGFR 62095 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 55198488 55198937 55198616 Y SEC61G NA NA NA NA NA EGFR 113774 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 55200352 55201043 55200686 Y SEC61G,EGFR NA NA NA NA NA EGFR 115638 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 55201472 55201858 55201601 Y SEC61G NA NA NA NA NA EGFR 116758 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 55253994 55254266 55254079 Y SEC61G NA NA NA NA NA EGFR 169280 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 63767130 63767234 63767166 Y NA ZNF736 NA NA NA NA ZNF736 1293 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 63924105 63924304 63924148 Y NA NA NA NA NA NA ZNF680 97180 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 65715824 65716062 65715909 Y RABGEF1,KCTD7 TPST1 NA NA NA NA TPST1 47638 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 66152523 66152575 66152558 Y RABGEF1,KCTD7 RABGEF1 KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 RABGEF1 7372 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 70740469 70740869 70740669 Y NA NA NA NA NA NA WBSCR17 145314 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 73132412 73132545 73132481 Y LAT2,BCL7B WBSCR22,DNAJC30,STX1A,ABHD11 NA NA NA NA STX1A 410 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 73157180 73157738 73157420 Y FZD9,BAZ1B,TBL2,MLXIPL,ABHD11,CLDN4,CLDN3 STX1A,ABHD11,CLDN3 NA NA NA NA ABHD11 5983 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 75701168 75701283 75701226 Y NA STYXL1,MDH2 NA NA NA NA MDH2 25799 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 75947305 75947626 75947472 Y RHBDD2,SRRM3 HSPB1,YWHAG NA NA NA NA HSPB1 17444 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 79803492 79803786 79803598 Y NA GNAI1 NA NA NA NA GNAI1 42221 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 80571600 80571811 80571745 Y NA SEMA3C NA NA NA NA SEMA3C 21925 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 83688045 83688341 83688303 Y NA NA NA NA NA NA SEMA3A 431699 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 93511378 93511666 93511551 Y BET1,TFPI2 TFPI2,GNG11 NA NA NA NA TFPI2 6637 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr7 94004729 94005413 94005273 Y NA COL1A2 NA NA NA NA COL1A2 16460 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 99961767 99962035 99961969 Y NA PILRB PILRA IMR90 Hi-C 24141950 PILRB 30030 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 100143295 100143664 100143516 Y NA AGFG2,LRCH4 NA NA NA NA AGFG2 8461 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 100743461 100743946 100743576 Y GNB2,TRIM56 TRIM56,SERPINE1 SERPINE1 IMR90 Hi-C 24141950 TRIM56 16741 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 101526005 101526525 101526438 Y SH2B2,CUX1,CUX1 NA NA NA NA NA CUX1 69046 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 101929978 101930313 101930074 Y CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2 NA NA NA NA NA PRKRIP1 72006 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 102514621 102514825 102514690 Y NA LRRC17 FAM185A IMR90 Hi-C 24141950 LRRC17 36613 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 104597631 104597869 104597756 Y MLL5 NA NA NA NA NA LINC01004 53622 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 106408522 106408807 106408715 Y NAMPT,PIK3CG,HBP1 RP5-884M6.1 CCDC71L,PIK3CG,HBP1,NAMPT,PRKAR2B,CBLL1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RP5-884M6.1 4650 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 107205466 107205592 107205534 Y COG5 DUS4L,COG5,BCAP29 NA NA NA NA COG5 2507 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 116328034 116328226 116328184 Y ST7,CAV2,CAV2,CAV1,CAV1,MET MET NA NA NA NA MET 17590 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 122311337 122311706 122311522 Y NA RPS26P31 NA NA NA NA RPS26P31 7638 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 128366228 128366292 128366260 Y CCDC136 CALU NA NA NA NA CALU 11054 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130571851 130572495 130572306 Y MKLN1,MKLN1 NA NA NA NA NA COPG2 220253 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130586004 130586434 130586371 Y NA NA NA NA NA NA MKLN1 206421 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 130588239 130588699 130588531 Y MKLN1,MKLN1 NA MIR29A,MIR29B1 IMR90 Hi-C 24141950 MKLN1 204156 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 130593505 130595916 130594870 Y NA NA MIR29A,MIR29B1 IMR90 Hi-C 24141950 MKLN1 196939 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 130602337 130602820 130602733 Y MKLN1,MKLN1 NA FLJ43663 IMR90 Hi-C 24141950 MKLN1 190035 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130606000 130606565 130606293 Y NA NA LOC646329 MCF7 ChIA-PET 22265404 MKLN1 186290 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130633473 130633870 130633858 Y NA NA NA NA NA NA MKLN1 158985 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130641725 130642119 130642041 Y MKLN1 NA NA NA NA NA MKLN1 150736 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 130645057 130645459 130645325 Y MKLN1,MKLN1 NA NA NA NA NA MKLN1 147396 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130795999 130796263 130796171 Y MKLN1,MKLN1 MKLN1 NA NA NA NA MKLN1 3144 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130910382 130910723 130910553 Y MKLN1 AC009362.2 NA NA NA NA AC009362.2 14626 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130920397 130920794 130920689 Y MKLN1,MKLN1 AC009362.2 NA NA NA NA AC009362.2 4555 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 130923142 130923337 130923228 Y MKLN1,MKLN1 AC009362.2 NA NA NA NA AC009362.2 2012 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 134144888 134145050 134144951 Y AKR1B1 AKR1B1 NA NA NA NA AKR1B1 2852 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 135665513 135665767 135665568 Y NA MTPN NA NA NA NA MTPN 5412 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 137352437 137352725 137352566 Y NA NA NA NA NA NA DGKI 177113 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 137355325 137355590 137355458 Y NA NA NA NA NA NA DGKI 174248 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 137441898 137442245 137442146 Y NA NA NA NA NA NA DGKI 87593 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 137659854 137660135 137660099 Y NA CREB3L2 NA NA NA NA CREB3L2 24678 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 139227178 139227349 139227257 Y NA ERHP1 NA NA NA NA ERHP1 10192 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr7 139365521 139365926 139365718 Y NA NA NA NA NA NA TBXAS1 108924 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 139431881 139432226 139432135 Y TBXAS1,JHDM1D,HIPK2 TBXAS1,HIPK2 NA NA NA NA TBXAS1 42624 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 139555360 139555974 139555461 Y JHDM1D,TBXAS1 NA NA NA NA NA HIPK2 79783 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 143072489 143072836 143072701 Y GSTK1,FAM115C AC093673.5,ZYX NA NA NA NA AC093673.5 2752 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 143083267 143084129 143083354 Y TAS2R40,FAM131B,FAM131B AC093673.5,ZYX NA NA NA NA ZYX 7094 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 148638273 148638633 148638462 Y NA RNY5 EZH2,ZNF786,ZNF398,ZNF425,CUL1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RNY5 1693 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr7 151493401 151493985 151493754 Y RHEB,PRKAG2,PRKAG2 NA NA NA NA NA PRKAG2 78225 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr7 152160715 152161193 152160959 Y NA NA NA NA NA NA XRCC2 210057 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 842852 842925 842889 Y NA NA NA NA NA NA ERICH1 156746 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 1693574 1694042 1693752 Y CLN8 CLN8,CTD-2336O2.1 ARHGEF10,CLN8,MIR596,KBTBD11,ZNF596 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLN8 7902 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 4848301 4848393 4848346 Y CSMD1 NA NA NA NA NA PAICSP4 205447 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 8153597 8154098 8153801 Y NA NA MFHAS1,SGK223,CLDN23,FLJ10661 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SGK223 87910 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 8340993 8341010 8341002 Y NA NA SGK223 IMR90 Hi-C 24141950 SGK223 98985 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 8701542 8701893 8701762 Y NA MFHAS1 NA NA NA NA MFHAS1 47262 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 8992774 8993100 8992937 Y NA PPP1R3B NA NA NA NA PPP1R3B 13984 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 11312887 11313950 11313920 Y NA FAM167A NA NA NA NA FAM167A 16274 CAGE SK-OV-3-R hg19 FANTOM5 4.54812887640566 chr8 11314255 11315026 11314813 Y XKR6,MTMR9,FAM167A FAM167A NA NA NA NA FAM167A 15198 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 11337266 11337614 11337440 Y FAM167A FAM167A C8orf12,BLK IMR90 Hi-C 24141950 FAM167A 7042 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 11367839 11367991 11367915 Y BLK FAM167A NA NA NA NA FAM167A 37615 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 12988209 12988727 12988474 Y DLC1 NA NA NA NA NA LONRF1 376627 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 13210778 13210972 13210875 Y NA NA NA NA NA NA DLC1 160195 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 13224231 13224684 13224410 Y NA NA NA NA NA NA DLC1 146483 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr8 16280941 16281214 16281102 Y MSR1 NA NA NA NA NA ZDHHC2 730324 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 18991999 18992391 18992140 Y NA NA PSD3,LOC100128993 IMR90 Hi-C 24141950 PSD3 51759 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 19028579 19029034 19028823 Y NA NA NA NA NA NA PSD3 88339 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 22522684 22522941 22522886 Y NA BIN3,EGR3 NA NA NA NA BIN3 1720 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 23184959 23185020 23184990 Y LOXL2 NA NA NA NA NA R3HCC1 59326 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 23210314 23210863 23210698 Y NA NA NA NA NA NA LOXL2 69978 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr8 23618921 23619563 23619216 Y ENTPD4,ENTPD4 NA STC1,ENTPD4 IMR90 Hi-C 24141950 NKX3-1 80481 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 25242857 25243137 25242939 Y NA NA KCTD9 IMR90 Hi-C 24141950 KCTD9 70855 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 26008929 26009154 26009015 Y NA NA PPP2R2A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PPP2R2A 137853 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 26466209 26466513 26466418 Y PPP2R2A,BNIP3L NA NA NA NA NA DPYSL2 96418 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 26498541 26498935 26498595 Y NA NA NA NA NA NA RP11-384C12.1 128372 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 28258528 28258941 28258737 Y HMBOX1,HMBOX1 ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 310 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr8 29495067 29495424 29495202 Y KIF13B NA DUSP4,LOC286135,C8orf75,MIR3148 IMR90 Hi-C 24141950 DUSP4 288882 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 29513029 29513506 29513190 Y KIF13B NA DUSP4,MIR3148,C8orf75,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 306844 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 29526859 29527039 29527017 Y NA NA LOC286135,DUSP4,C8orf75 IMR90 Hi-C 24141950 DUSP4 320674 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 29946002 29946367 29946215 Y TMEM66,LEPROTL1 TMEM66,LEPROTL1,RPS15AP24 NA NA NA NA LEPROTL1 4547 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 35382808 35383133 35382968 Y NA NA NA NA NA NA RNF122 1960165 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 37376212 37376482 37376355 Y NA RP11-150O12.1 KCNU1,ERLIN2 IMR90 Hi-C 24141950 RP11-150O12.1 33219 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 38035023 38035257 38035173 Y WHSC1L1,LETM2,LETM2,BAG4 BAG4,LSM1,DDHD2 NA NA NA NA LSM1 2775 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 38242599 38242872 38242674 Y TACC1,WHSC1L1,LETM2,LETM2 WHSC1L1,LETM2 NA NA NA NA LETM2 874 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 38262735 38263237 38262894 Y TACC1,PLEKHA2,C8orf86 WHSC1L1,LETM2 NA NA NA NA LETM2 21010 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 38856419 38857534 38856583 Y NA TM2D2,ADAM9 NA NA NA NA ADAM9 4031 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 39797063 39797940 39797610 Y NA IDO1 NA NA NA NA IDO1 39269 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 39957250 39957527 39957387 Y NA NA C8orf4 IMR90 Hi-C 24141950 C8orf4 51462 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 40032102 40032537 40032342 Y IDO1 C8orf4 NA NA NA NA C8orf4 23113 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 42053833 42054135 42053951 Y NA AP3M2,PLAT NA NA NA NA PLAT 9107 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 42072486 42072556 42072531 Y NA PLAT AP3M2,IKBKB IMR90 Hi-C 24141950 PLAT 9244 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 43093596 43094096 43093640 Y NA NA NA NA NA NA HGSNAT 100040 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 47885401 47885427 47885415 Y NA NA NA NA NA NA RPL10AP2 181314 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 49320367 49320668 49320511 Y NA RPL29P19 SNAI2 IMR90 Hi-C 24141950 RPL29P19 25217 CAGE SK-OV-3-R hg19 FANTOM5 3.63850310112453 chr8 49344700 49344905 49344800 Y NA RPL29P19 SNAI2 IMR90 Hi-C 24141950 RPL29P19 49550 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 49430601 49430974 49430806 Y NA NA SNAI2 IMR90 Hi-C 24141950 RPL29P19 135451 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 50968903 50969278 50969091 Y NA NA NA NA NA NA SNAI2 1136604 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 50969485 50969741 50969613 Y NA NA NA NA NA NA SNAI2 1137186 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 53188453 53188874 53188470 Y NA NA NA NA NA NA PCMTD1 378718 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 53625473 53626379 53625848 Y RB1CC1 RB1CC1 NA NA NA NA RB1CC1 30024 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 54798731 54798762 54798749 Y NA ATP6V1H,RGS20 NA NA NA NA RGS20 36363 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 54884977 54885679 54885327 Y NA TCEA1 NA NA NA NA TCEA1 47410 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 55125016 55125190 55125101 Y ATP6V1H,ATP6V1H NA NA NA NA NA MRPL15 79246 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 59768911 59769118 59769011 Y NA NA NA NA NA NA NSMAF 198508 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 61592861 61593584 61592948 Y NA NA NA NA NA NA RAB2A 165445 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 61850490 61850754 61850677 Y NA NA CHD7 IMR90 Hi-C 24141950 RAB2A 423074 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 62445230 62445580 62445420 Y CLVS1,ASPH NA NA NA NA NA ASPH 179575 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 62606389 62606706 62606619 Y NA ASPH NA NA NA NA ASPH 18449 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 62620817 62621622 62621526 Y NA ASPH NA NA NA NA ASPH 3533 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 62624516 62625412 62625017 Y ASPH NA NA NA NA NA ASPH 0 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 67433991 67434613 67434592 Y NA NA NA NA NA NA MYBL1 89869 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 67434763 67435122 67434951 Y NA NA NA NA NA NA MYBL1 89360 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr8 67445791 67446197 67446047 Y ADHFE1,VCPIP1,MYBL1 NA NA NA NA NA MYBL1 78285 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 67447907 67448273 67448065 Y MYBL1,C8orf45 NA NA NA NA NA MYBL1 76209 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 67565254 67565409 67565332 Y NA MYBL1,VCPIP1,C8orf44 NA NA NA NA VCPIP1 12043 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 72753377 72753463 72753388 Y NA RP11-383H13.1,MSC NA NA NA NA MSC 1240 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 77469082 77469378 77469240 Y NA NA NA NA NA NA LINC01111 152193 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 80275634 80276026 80275830 Y STMN2 NA NA NA NA NA STMN2 245023 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 94508795 94509073 94508968 Y NA NA NA NA NA NA FAM92A1 199716 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 94947484 94947898 94947643 Y GEM NA NA NA NA NA PDP1 79449 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 99658802 99659210 99659171 Y NA NA NA NA NA NA STK3 293845 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 102167683 102167913 102167765 Y NA ZNF706 ZNF706,YWHAZ,FLJ42969 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF706 48508 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 102171133 102171473 102171263 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 ZNF706 ZNF706,YWHAZ,FLJ42969 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF706 44948 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 103750893 103751082 103750980 Y AZIN1,KLF10,KLF10 NA UBR5,KLF10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KLF10 84763 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 104457896 104458033 104457972 Y NA DCAF13,SLC25A32 NA NA NA NA SLC25A32 32479 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 107059911 107060047 107059923 Y NA RP11-152P17.2 OXR1 IMR90 Hi-C 24141950 RP11-152P17.2 10705 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 107709391 107709773 107709582 Y NA TAGLN2P1 NA NA NA NA TAGLN2P1 1150 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 116068457 116069128 116068655 Y NA NA NA NA NA NA TRPS1 750771 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 116660380 116660747 116660648 Y TRPS1 NA NA NA NA NA TRPS1 159152 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 117378539 117378781 117378660 Y NA NA NA NA NA NA UTP23 397961 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 118743302 118743393 118743321 Y NA NA EXT1,MED30,SAMD12 IMR90 Hi-C 24141950 MED30 212350 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 118969079 118969407 118969255 Y MED30 NA NA NA NA NA EXT1 152685 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 120063756 120064086 120063927 Y NA NA SAMD12,SAMD12-AS1,TNFRSF11B IMR90 Hi-C 24141950 TNFRSF11B 101317 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 122755244 122755615 122755430 Y NA NA NA NA NA NA HAS2 103614 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 123908169 123908483 123908299 Y NA NA NA NA NA NA DERL1 144180 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 124549741 124550229 124550044 Y FBXO32,FBXO32 FBXO32 NA NA NA NA FBXO32 1217 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 124552481 124552488 124552485 Y FBXO32,FBXO32 FBXO32 NA NA NA NA FBXO32 1035 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 125764120 125764533 125764318 Y ZNF572,NSMCE2,KIAA0196,RNF139,MTSS1 NA MTSS1,ZNF572,NDUFB9,TATDN1,LOC157381,SQLE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TATDN1 214421 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 126231490 126231859 126231657 Y MTSS1,KIAA0196,NSMCE2,TRIB1 NA NA NA NA NA KIAA0196 129408 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr8 126286229 126286368 126286299 Y KIAA0196,NSMCE2,TRIB1 NA NA NA NA NA TRIB1 154195 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 126290719 126290948 126290836 Y NA NA NA NA NA NA TRIB1 149615 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128208934 128209645 128209301 Y NA CCAT1 LOC727677,MYC IMR90 Hi-C 24141950 CCAT1 19688 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128227982 128228299 128228180 Y NA CCAT1 LOC727677,MYC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCAT1 1034 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128306934 128307283 128307196 Y MYC NA LOC727677 IMR90 Hi-C 24141950 CCAT1 77601 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr8 128309901 128310145 128310009 Y MYC NA LOC727677 IMR90 Hi-C 24141950 CCAT1 80568 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128344177 128344591 128344565 Y NA NA LOC727677 IMR90 Hi-C 24141950 CCAT1 114844 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128883085 128883449 128883196 Y NA NA NA NA NA NA PVT1 78306 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128888391 128888698 128888485 Y NA NA NA NA NA NA PVT1 83612 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chr8 128888912 128889201 128889088 Y NA NA NA NA NA NA PVT1 84133 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 128944008 128944415 128944139 Y NA NA NA NA NA NA RNU4-25P 76442 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 129180047 129180432 129180183 Y NA NA NA NA NA NA RNU4-25P 159190 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 129180743 129180870 129180780 Y NA NA NA NA NA NA RNU4-25P 159886 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 131296023 131296343 131296248 Y NA NA NA NA NA NA ASAP1 157563 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 132870393 132870759 132870576 Y HHLA1 EFR3A ADCY8 IMR90 Hi-C 24141950 EFR3A 43576 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 134315401 134315895 134315622 Y ST3GAL1 NDRG1 TG,NDRG1,ST3GAL1 IMR90 Hi-C 24141950 NDRG1 3136 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 135566081 135566154 135566118 Y NA NA NA NA NA NA ZFAT 157138 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 139799567 139799714 139799659 Y NA NA NA NA NA NA TRAPPC9 1666964 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 143548915 143549079 143548997 Y NA NA NA NA NA NA TSNARE1 66314 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 144629463 144629732 144629564 Y SPATC1,GRINA ZC3H3,GSDMD,NAPRT1,TIGD5,EEF1D NA NA NA NA GSDMD 3645 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr8 145025737 145026802 145026365 Y ZC3H3,GSDMD,NAPRT1,EEF1D,SPATC1,PLEC,PARP10 PLEC,GRINA NA NA NA NA PLEC 22100 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 2623377 2623723 2623671 Y NA VLDLR NA NA NA NA VLDLR 3543 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 3865342 3865632 3865553 Y NA NA NA NA NA NA RFX3 341338 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 4086123 4086410 4086330 Y NA NA NA NA NA NA GLIS3 259982 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 4334414 4334840 4334611 Y NA GLIS3 GLIS3 IMR90 Hi-C 24141950 GLIS3 11552 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 5901129 5901190 5901160 Y NA NA NA NA NA NA ERMP1 70012 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 6384866 6385180 6385056 Y NA UHRF2 NA NA NA NA UHRF2 25971 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 14096603 14096776 14096679 Y NA NA NA NA NA NA NFIB 300206 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 16337405 16337786 16337534 Y NA NA BNC2 IMR90 Hi-C 24141950 RP11-62F24.2 387026 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 18490587 18490949 18490797 Y ADAMTSL1 ADAMTSL1 NA NA NA NA ADAMTSL1 18695 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 21576231 21576644 21576439 Y NA MIR31HG MIR31HG IMR90 Hi-C 24141950 MIR31HG 18563 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 21677834 21678156 21678014 Y NA NA MIR31HG IMR90 Hi-C 24141950 MIR31HG 120166 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 21685022 21685416 21685227 Y NA NA MIR31HG IMR90 Hi-C 24141950 MTAP 115126 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 21695810 21696232 21696052 Y NA NA MIR31HG IMR90 Hi-C 24141950 MTAP 104310 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 29825337 29825639 29825488 Y NA NA NA NA NA NA ACO1 2556979 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 33017262 33017602 33017524 Y NA APTX,DNAJA1 DNAJA1 MCF7 ChIA-PET 22265404 APTX 5564 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 33268680 33268843 33268732 Y NA BAG1,CHMP5,NFX1 NA NA NA NA CHMP5 5740 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 34332110 34332236 34332173 Y NA KIF24,NUDT2,KIAA1161 NA NA NA NA NUDT2 4606 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 35492185 35492605 35492350 Y RUSC2 NA NA NA NA NA TESK1 110762 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 35516545 35516820 35516591 Y NA NA NA NA NA NA TESK1 86547 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 35518041 35518590 35518314 Y CREB3,VCP,STOML2,RUSC2 NA NA NA NA NA TESK1 84777 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 35520478 35520852 35520494 Y NA NA NA NA NA NA TESK1 82515 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 35603992 35604628 35604112 Y TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2 TESK1 NA NA NA NA TESK1 625 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 37032033 37032396 37032120 Y ZCCHC7,PAX5 NA NA NA NA NA ZCCHC7 86140 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 37198449 37198887 37198604 Y ZBTB5,ZCCHC7 NA NA NA NA NA ZCCHC7 79913 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 37938183 37938323 37938277 Y SHB NA NA NA NA NA SHB 128887 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 68455261 68455556 68455421 Y NA NA NA NA NA NA FAM122A 2937408 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 71487093 71487366 71487280 Y NA NA NA NA NA NA FAM122A 94129 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 72591131 72591428 72591305 Y NA NA MAMDC2,LOC100507299,LOC100507244,SMC5,TRPM3,TJP2 IMR90 Hi-C 24141950 PTAR1 218256 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 75731054 75731296 75731180 Y ANXA1 ANXA1 ANXA1 IMR90 Hi-C 24141950 ANXA1 33377 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 75747117 75747734 75747349 Y ANXA1 ANXA1 ANXA1 IMR90 Hi-C 24141950 ANXA1 16939 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr9 79191243 79191544 79191412 Y NA AL161626.1 NA NA NA NA AL161626.1 6512 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 84004399 84004744 84004646 Y NA NA NA NA NA NA TLE1 297476 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 85888522 85888919 85888721 Y NA NA NA NA NA NA FRMD3 262542 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 88294983 88295025 88294997 Y NA NA NA NA NA NA AGTPBP1 59919 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 89626902 89626982 89626949 Y NA CDC20P1 NA NA NA NA CDC20P1 2335 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 90182587 90182864 90182726 Y NA RP11-40C6.2 NA NA NA NA RP11-40C6.2 44370 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 91150927 91151269 91151097 Y NA NXNL2 NA NA NA NA NXNL2 2911 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 92040069 92040496 92040389 Y C9orf47,S1PR3 NA NA NA NA NA SEMA4D 70549 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 95880555 95880921 95880640 Y NA C9orf89,NINJ1 NA NA NA NA NINJ1 13649 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 96723182 96723238 96723197 Y NA NA BARX1 MCF7 ChIA-PET 22265404 PTPDC1 67838 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 96928143 96928630 96928259 Y NA MIRLET7D NA NA NA NA MIRLET7D 10486 CAGE SK-OV-3-R hg19 FANTOM5 2.7288773258434 chr9 97631649 97631973 97631839 Y NA NA NA NA NA NA C9orf3 144666 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 100565577 100566264 100565821 Y CORO2A,FOXE1 FOXE1 FOXE1,C9orf156 IMR90 Hi-C 24141950 FOXE1 47272 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 101002580 101002910 101002849 Y C9orf156,NANS,TBC1D2 CORO2A,TBC1D2 NA NA NA NA TBC1D2 13005 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 102767343 102767551 102767505 Y NA NA NA NA NA NA ERP44 91771 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 103029299 103029483 103029391 Y NA NA NA NA NA NA TEX10 83738 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 107668768 107669725 107669153 Y SLC44A1,OR13C3 ABCA1 NA NA NA NA ABCA1 18793 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 108058871 108059613 108059363 Y ABCA1,TMEM38B,FSD1L,FSD1L NA NA NA NA NA SLC44A1 53968 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 109655091 109655246 109655169 Y NA ZNF462 NA NA NA NA ZNF462 31713 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 112578765 112579213 112578950 Y PALM2 PALM2-AKAP2,AKAP2 NA NA NA NA AKAP2 37996 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 116385277 116385518 116385372 Y RGS3 NA NA NA NA NA RGS3 180266 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 117137275 117137511 117137393 Y DFNB31,DFNB31 NA NA NA NA NA DFNB31 128219 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 117566825 117567042 117566994 Y TNFSF15 NA NA NA NA NA C9orf91 195339 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 117657108 117657611 117657338 Y DFNB31,ATP6V1G1,TNFSF15,TNFSF15,TNFSF8 NA NA NA NA NA TNC 220925 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 117768889 117769656 117769152 Y ATP6V1G1,TNFSF15,TNFSF8 NA NA NA NA NA TNC 108880 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 118435271 118435690 118435488 Y NA NA ASTN2,PAPPA,LOC100128505 IMR90 Hi-C 24141950 TNC 556735 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 118613328 118613455 118613392 Y NA NA NA NA NA NA TNC 734792 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 119311432 119311888 119311785 Y NA NA NA NA NA NA TRIM32 135693 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 123478444 123478636 123478538 Y NA MEGF9 NA NA NA NA MEGF9 3696 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 125109314 125109437 125109338 Y NA NA TTLL11,MIR4478,MORN5,NDUFA8,LHX6,RBM18,MRRF,PTGS1,OR1K1,PDCL IMR90 Hi-C 24141950 RBM18 84196 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 126154038 126154354 126154284 Y NA NA NA NA NA NA STRBP 125183 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 127018843 127019044 127018944 Y NA NEK6 NA NA NA NA NEK6 958 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 127509473 127509808 127509481 Y NA NR6A1,OLFML2A NA NA NA NA NR6A1 21781 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 127944437 127944756 127944696 Y NR6A1,GOLGA1,PPP6C,GAPVD1 SCAI,PPP6C,RABEPK NA NA NA NA PPP6C 5462 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 128172483 128172773 128172647 Y NA NA PBX3 MCF7 ChIA-PET 22265404 GAPVD1 150410 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 128274126 128274455 128274251 Y NA NA NA NA NA NA MAPKAP1 193058 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 130736209 130736450 130736330 Y NA DPM2,FAM102A NA NA NA NA FAM102A 4342 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 131127114 131127521 131127297 Y SLC25A25 COQ4,TRUB2,SLC27A4,URM1,CERCAM NA NA NA NA URM1 4077 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 131930457 131930532 131930510 Y PRRX2 IER5L NA NA NA NA IER5L 8008 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 132168772 132168919 132168823 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00963 74811 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 132175926 132176326 132176076 Y NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LINC00963 67404 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 132257886 132258547 132258348 Y NA LINC00963 NA NA NA NA LINC00963 14156 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 132369856 132370376 132370136 Y CRAT,IER5L,C9orf106,PRRX2,GPR107 ASB6 NA NA NA NA ASB6 32068 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 134608249 134608835 134608704 Y FAM78A,RAPGEF1,RAPGEF1 RAPGEF1 NA NA NA NA RAPGEF1 4626 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 134608936 134609538 134609242 Y RAPGEF1,RAPGEF1 RAPGEF1 NA NA NA NA RAPGEF1 3923 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 134908976 134909021 134908999 Y NA MED27 NA NA NA NA MED27 44274 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 136009131 136009458 136009277 Y GTF3C4,DDX31,TSC1,RALGDS NA NA NA NA NA GTF3C5 105055 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 136739075 136739598 136739373 Y VAV2 NA NA NA NA NA VAV2 116128 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chr9 137483960 137484781 137484422 Y NA COL5A1 RXRA,COL5A1 IMR90 Hi-C 24141950 COL5A1 46839 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 137536549 137536868 137536739 Y COL5A1 COL5A1 NA NA NA NA COL5A1 4929 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 138348639 138348707 138348673 Y NA PPP1R26,MRPS2,C9orf116 NA NA NA NA PPP1R26 20218 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 138847769 138847991 138847872 Y UBAC1 UBAC1 NA NA NA NA UBAC1 3235 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 139136338 139136616 139136467 Y QSOX2 QSOX2 NA NA NA NA QSOX2 651 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chr9 140023869 140024391 140024239 Y NA MAN1B1,DPP7 GRIN1 K562 ChIA-PET 22265404 DPP7 16240 CAGE SK-OV-3-R hg19 FANTOM5 6.36738042696793 chr9 140294443 140294697 140294564 Y UAP1L1,C9orf167,NRARP EXD3,NOXA1 NA NA NA NA EXD3 21017 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 3732525 3732707 3732561 Y NA NA NA NA NA NA PRKX 102876 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 7896783 7897141 7896963 Y VCX PNPLA4 NA NA NA NA PNPLA4 3003 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 15874387 15874556 15874498 Y ZRSR2,AP1S2 AP1S2 NA NA NA NA AP1S2 3333 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 19768658 19769006 19768788 Y SH3KBP1 NA NA NA NA NA SH3KBP1 134713 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 23919211 23919551 23919376 Y ZFX,ZFX,ZFX,ZFX,ACOT9,SAT1 APOO NA NA NA NA APOO 4506 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 30639363 30639574 30639470 Y GK,CXorf21 FTLP2 NA NA NA NA FTLP2 6841 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 40943673 40944218 40943773 Y CXorf38,MED14,DDX3X,USP9X USP9X NA NA NA NA USP9X 785 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 44168721 44168911 44168853 Y NA NA NA NA NA NA FUNDC1 231336 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 45338516 45338773 45338583 Y NA NA MIR221,MIR222 IMR90 Hi-C 24141950 MIR222 265757 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 45376807 45376988 45376867 Y NA NA MIR221,MIR222 IMR90 Hi-C 24141950 MIR222 227542 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 45568719 45568861 45568812 Y NA MIR222 MIR222,MIR221 IMR90 Hi-C 24141950 MIR222 35669 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 45626471 45627108 45626806 Y NA MIR222 MIR222,MIR221 IMR90 Hi-C 24141950 MIR222 21941 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 45631125 45631239 45631172 Y NA MIR222 NA NA NA NA MIR222 26595 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 46278987 46279293 46279130 Y NA GAPDHP65 NA NA NA NA GAPDHP65 18856 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 47180934 47181052 47180967 Y ELK1,CDK16 NA UBA1,USP11 IMR90 Hi-C 24141950 USP11 90845 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 48345811 48346195 48345963 Y WAS,RBM3,PQBP1,PQBP1,PQBP1,OTUD5 FTSJ1,PORCN,TBC1D25 NA NA NA NA FTSJ1 13270 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 48390158 48390246 48390210 Y NA PORCN,TBC1D25,RBM3 NA NA NA NA TBC1D25 5599 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 64888338 64888720 64888577 Y MSN NA NA NA NA NA MSN 82081 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 67624994 67625390 67625192 Y NA OPHN1 NA NA NA NA OPHN1 26365 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 68004355 68004677 68004478 Y NA SERBP1P1,EFNB1 NA NA NA NA SERBP1P1 3040 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 70275409 70275661 70275633 Y NA SNX12 NA NA NA NA SNX12 10612 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 70640504 70640913 70640718 Y NA NA NA NA NA NA TAF1 56390 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 77226253 77226302 77226278 Y NA NA NA NA NA NA ATP7A 62059 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 77306835 77307068 77306952 Y NA PGK1 NA NA NA NA PGK1 11617 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 85196824 85197022 85197001 Y NA NA NA NA NA NA CHM 103544 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 85339971 85340972 85340615 Y NA CHM NA NA NA NA CHM 39405 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 106920003 106920801 106920325 Y TSC22D3,TSC22D3 NA TSC22D3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PRPS1 50266 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 108950609 108950797 108950701 Y NXT2,NXT2 ACSL4 NA NA NA NA ACSL4 23835 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 109003262 109003404 109003333 Y ACSL4 ACSL4 NA NA NA NA ACSL4 28630 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 112084647 112084962 112084847 Y AMOT,AMOT NA NA NA NA NA ALG13 1177604 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 117896439 117896822 117896632 Y NA IL13RA1 NA NA NA NA IL13RA1 36904 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 120331489 120331718 120331553 Y NA NA NA NA NA NA C1GALT1C1 569484 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 125606277 125607115 125606755 Y NA MTND4P24 NA NA NA NA MTND4P24 1409 CAGE SK-OV-3-R hg19 FANTOM5 5.4577546516868 chrX 129400519 129400680 129400638 Y NA ZNF280C NA NA NA NA ZNF280C 193 CAGE SK-OV-3-R hg19 FANTOM5 1.81925155056227 chrX 149862815 149863170 149863006 Y MTMR1 MTMR1 NA NA NA NA MTMR1 3380 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 151149745 151149882 151149808 Y NA GABRE NA NA NA NA GABRE 8593 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrX 153359354 153359823 153359622 Y NA MECP2 NA NA NA NA MECP2 1389 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133 chrY 13470001 13470175 13470039 Y NA NA NA NA NA NA ACTG1P11 6837595 CAGE SK-OV-3-R hg19 FANTOM5 0.909625775281133