Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 115640994 115643122 115642147 N NA NA SYCP1,CASQ2,TSPAN2 IMR90 Hi-C 24141950 SIKE1 317686 2 chr1 145139080 145139740 145139465 N NA SEC22B NA NA NA NA SEC22B 42673 3 chr1 147789753 147791371 147790618 N NA NA NA NA NA NA CHD1L 1075462 4 chr1 147805788 147807742 147807026 Y NA NA NA NA NA NA CHD1L 1091497 5 chr1 148176192 148176928 148176527 N NA NA NA NA NA NA LOC388692 1102548 6 chr1 148240713 148242677 148241250 N NA NA NA NA NA NA LOC388692 1036799 7 chr1 148248176 148248873 148248816 N NA NA NA NA NA NA LOC388692 1030603 8 chr1 149222349 149223593 149223054 Y NA NA NBPF10,SEC22B,NBPF15 MCF7 ChIA-PET 22265404 LOC388692 55883 9 chr1 149332901 149333847 149333390 N NA NA NA NA NA NA LOC388692 53425 10 chr1 149717914 149720716 149718651 N NA NA NA NA NA NA HIST2H2BF 63212 11 chr1 152019317 152021781 152020696 N NA S100A11 NA NA NA NA S100A11 9806 12 chr1 157372633 157374128 157373469 N NA NA NA NA NA NA ETV3 264250 13 chr1 15929553 15931153 15930165 N NA DDI2 DDI2,DNAJC16,AGMAT,FBLIM1,PLEKHM2,SLC25A34,TMEM82 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDI2 12800 14 chr1 161358962 161361285 161359896 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 74796 15 chr1 161368204 161371161 161369365 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 84038 16 chr1 167586305 167587350 167586475 N NA RCSD1 RCSD1 IMR90 Hi-C 24141950 RCSD1 12124 17 chr1 168114447 168116113 168115273 N NA GPR161,TIPRL GPR161,TIPRL IMR90 Hi-C 24141950 GPR161 8823 18 chr1 16822324 16826575 16825755 Y NA CROCCP3 SPATA21,NECAP2,CROCCP3,NBPF1,CROCC IMR90 Hi-C 24141950 CROCCP3 3128 19 chr1 17215199 17216642 17216048 N NA CROCC NBPF1,MIR3675,CROCC,ESPNP IMR90 Hi-C 24141950 CROCC 31803 20 chr1 17230368 17233237 17231407 Y PADI4,PADI2 CROCC CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CROCC 15208 21 chr1 17240070 17243601 17240800 N NA CROCC CROCC K562 ChIA-PET 22265404 CROCC 4844 22 chr1 173989459 173993392 173991592,173992862 N,N NA;NA RC3H1 ZBTB37,RC3H1,GAS5 IMR90 Hi-C 24141950 RC3H1 27249 23 chr1 178035405 178037269 178036561 N NA NA NA NA NA NA RALGPS2 657031 24 chr1 181997915 181999648 181998912 Y GLUL,GLUL NA ZNF648 MCF7 ChIA-PET 22265404 GLUL 361693 25 chr1 182111420 182114747 182113491 Y RNASEL,GLUL,GLUL NA LINC00272,TEDDM1,GLUL IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GLUL 246594 26 chr1 182227690 182229957 182229155 N NA NA GLUL K562 ChIA-PET 22265404 GLUL 131384 27 chr1 199008582 199012351 199009508,199010881 N,N NA;NA NA NA NA NA NA LOC100131234 102024 28 chr1 199836417 199837621 199836926 N NA NA NR5A2 IMR90 Hi-C 24141950 C1orf98 505299 29 chr1 200219130 200221030 200219892 N NA NA NA NA NA NA C1orf98 121890 30 chr1 200269715 200272691 200271547 N NA NA NR5A2,C1orf98 IMR90 Hi-C 24141950 C1orf98 70229 31 chr1 204475264 204477419 204476030 N NA PIK3C2B,MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 8088 32 chr1 206299018 206307982 206304016,206306229 N,N NA;NA C1orf186 PM20D1,C1orf186,SLC41A1,SLC26A9,AVPR1B,MFSD4,NUCKS1,LOC284581,CTSE IMR90 Hi-C 24141950 C1orf186 10371 33 chr1 208131431 208133778 208132786 N NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CD46 206048 34 chr1 208135390 208139132 208136523 N NA NA CD34,LOC148696,MIR29B2,MIR29C,PLXNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CD46 210007 35 chr1 211779172 211781284 211780526 Y NA SLC30A1 SLC30A1 K562 ChIA-PET 22265404 SLC30A1 27073 36 chr1 224179602 224181669 224180388 Y NA NA NA NA NA NA FBXO28 120122 37 chr1 224200216 224202793 224201879 N NA NA NA NA NA NA FBXO28 98998 38 chr1 226296575 226299860 226298094 Y NA H3F3A ACBD3,C1orf55,H3F3A,LIN9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 H3F3A 46167 39 chr1 232764852 232767773 232766298 N NA NA TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2 IMR90 Hi-C 24141950 NTPCR 318597 40 chr1 234792267 234794198 234793121 Y NA IRF2BP2 IRF2BP2,TARBP1,LINC00184,LOC100506810 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 IRF2BP2 46996 41 chr1 234900791 234910470 234907769 Y IRF2BP2 LOC100506810 LOC100506810,IRF2BP2,LOC100506795,LINC00184,TOMM20,RBM34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 41002 42 chr1 234912177 234916689 234914178 Y IRF2BP2 NA IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 52388 43 chr1 235009281 235014060 235010337,235012284 N,Y NA;IRF2BP2,ARID4B NA IRF2BP2,LOC100506810,LINC00184,TARBP1,TOMM20,RBM34,LOC100506795 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 149492 44 chr1 235028744 235030926 235030135 N NA NA LINC00184,IRF2BP2,LOC100506810,TARBP1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506810 168955 45 chr1 235088603 235092814 235091071 N NA NA IRF2BP2,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 199442 46 chr1 235093580 235100711 235098250,235095526 N,N NA;NA NA IRF2BP2,LOC100506810,TARBP1,LINC00184,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 191545 47 chr1 235109640 235118423 235115569,235111640 N,N NA;NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 173833 48 chr1 235119286 235121662 235120352 Y IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 170594 49 chr1 235129439 235131330 235130395 N NA NA LINC00184,LOC100506810,IRF2BP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 160926 50 chr1 235145810 235149845 235148098 N NA NA LINC00184,TARBP1,LOC100506795,IRF2BP2,LOC100506810 IMR90 Hi-C 24141950 TOMM20 142411 51 chr1 235245247 235248465 235246963 N NA TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 43791 52 chr1 24245864 24247606 24246683 N NA CNR2,PNRC2 GALE,HMGCL,SRSF10,LOC100506963,PITHD1 K562 ChIA-PET 22265404 CNR2 6047 53 chr1 244011523 244015365 244013914 N NA AKT3 LOC339529 IMR90 Hi-C 24141950 AKT3 4939 54 chr1 244387263 244389234 244388031 N NA NA SDCCAG8,AKT3,LOC339529,ZNF238 IMR90 Hi-C 24141950 ZNF238 172702 55 chr1 244978305 244979876 244979119 N NA COX20,HNRNPU-AS1,HNRNPU NA NA NA NA COX20 18763 56 chr1 247372284 247375185 247373968 N NA NA MIR3916,ZNF496 MCF7 ChIA-PET 22265404 ZNF669 104610 57 chr1 249166891 249168900 249168229 N NA SH3BP5L,ZNF672,ZNF692,PGBD2 ZNF692,PGBD2,MIR3124,SH3BP5L K562,MCF7 ChIA-PET 22265404 ZNF692 13576 58 chr1 25347496 25351542 25349299 N NA NA RUNX3,CLIC4,C1orf63,SYF2 IMR90 Hi-C 24141950 SYF2 207471 59 chr1 26248925 26250090 26249738 N NA STMN1 STMN1,PAFAH2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STMN1 15932 60 chr1 26823759 26828957 26827513 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2,RPS6KA1 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 24857 61 chr1 26945868 26949430 26947588 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73092 62 chr1 26954061 26956025 26954615 N NA NA ARID1A,ZDHHC18,RPS6KA1,PIGV,SFN,GPN2,GPATCH3,NR0B2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARID1A 66497 63 chr1 32408776 32411426 32410103 N NA PTP4A2 KHDRBS1,SPOCD1 IMR90 Hi-C 24141950 PTP4A2 4788 64 chr1 33844642 33850257 33848922 N NA PHC2 ZNF362,PHC2,ZSCAN20 IMR90 Hi-C 24141950 PHC2 3448 65 chr1 35730042 35731223 35730703 N NA ZMYM4 ZMYM4,SFPQ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYM4 3345 66 chr1 36268868 36271505 36270253 N NA CLSPN,EIF2C4 NA NA NA NA EIF2C4 2323 67 chr1 38473981 38476150 38475178 N NA SF3A3,FHL3,UTP11L NA NA NA NA UTP11L 2234 68 chr1 46632069 46633005 46632566 N NA PIK3R3,LURAP1 MAST2,PIK3R3 IMR90 Hi-C 24141950 PIK3R3 33361 69 chr1 54950782 54957006 54954446 N NA NA TCEANC2,SSBP3,TMEM59,MRPL37,CYB5RL,CDCP2,C1orf177,YIPF1,HEATR8-TTC4,DIO1,HSPB11 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACOT11 56801 70 chr1 55006509 55009272 55008268 N NA ACOT11 NA NA NA NA ACOT11 4535 71 chr1 568211 570076 569687 N NA NA NA NA NA NA LOC643837 192988 72 chr1 65531378 65535427 65533728 N NA NA AK4,DNAJC6,LEPR,JAK1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 AK4 77805 73 chr1 66903745 66906404 66904999 N NA NA PDE4B IMR90 Hi-C 24141950 TCTEX1D1 311736 74 chr1 66910063 66912453 66911318 Y MIER1,PDE4B NA PDE4B,SGIP1 IMR90 Hi-C 24141950 TCTEX1D1 305687 75 chr1 6802923 6804568 6803897 N NA DNAJC11 CAMTA1 IMR90 Hi-C 24141950 DNAJC11 40957 76 chr1 8013539 8015661 8014323 N NA PARK7 NA NA NA NA PARK7 6053 77 chr1 84902387 84903889 84903210 N NA RPF1 PRKACB,MCOLN3,LPAR3 IMR90 Hi-C 24141950 RPF1 41031 78 chr1 87239634 87240907 87240207 Y SH3GLB1 NA HS2ST1,SEP15,SH3GLB1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SH3GLB1 69381 79 chr1 90221993 90226046 90222944 N NA NA LRRC8C,FLJ27354,LRRC8D IMR90 Hi-C 24141950 LRRC8D 60527 80 chr1 90227358 90230739 90228935 N NA NA LRRC8C,LRRC8D IMR90 Hi-C 24141950 LRRC8D 55834 81 chr1 9488370 9489744 9489086 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 109784 82 chr1 95184972 95187806 95186557 N NA NA F3,ABCD3,ALG14 IMR90 Hi-C 24141950 F3 177559 83 chr10 104956239 104959167 104957148 Y C10orf32,NT5C2 NT5C2 NA NA NA NA NT5C2 3176 84 chr10 115141132 115142246 115141906 Y TCF7L2 NA VTI1A,ZDHHC6,ACSL5,TCF7L2 IMR90 Hi-C 24141950 CASP7 296689 85 chr10 126604064 126606727 126605345 N NA ZRANB1 ZRANB1,CTBP2,METTL10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZRANB1 23965 86 chr10 134131806 134134699 134133897 N NA STK32C,LRRC27 DPYSL4,STK32C,LRRC27 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STK32C 10329 87 chr10 20904415 20906668 20905592 N NA NA NA NA NA NA PLXDC2 799043 88 chr10 22517608 22518789 22518142 N NA LOC100130992 COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 22212 89 chr10 26910606 26912150 26911384 N NA NA NA NA NA NA PDSS1 74445 90 chr10 27547394 27548928 27547979 N NA ACBD5 LOC387646 IMR90 Hi-C 24141950 ACBD5 16326 91 chr10 27607942 27609659 27608906 N NA NA PDSS1 MCF7 ChIA-PET 22265404 ACBD5 76874 92 chr10 30711900 30713059 30712503 N NA MAP3K8 MAP3K8 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K8 9891 93 chr10 30817680 30819319 30818625 Y MAP3K8,ZNF438 NA MAP3K8,KIAA1462,MTPAP,LOC729668,LYZL2 IMR90 Hi-C 24141950 MAP3K8 94730 94 chr10 31072200 31076158 31073688 Y NA NA ARHGAP12,ZEB1-AS1,ZEB1,ZNF438 IMR90 Hi-C 24141950 ZNF438 244708 95 chr10 31421961 31424132 31422771 Y ZNF438,ZNF438 NA ARHGAP12,ZEB1,ZNF438,ZEB1-AS1 IMR90 Hi-C 24141950 ZNF438 101095 96 chr10 32047109 32049749 32049181 Y ZEB1,KIF5B NA ZNF438,ZEB1,ARHGAP12,LYZL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARHGAP12 168021 97 chr10 32666075 32669355 32667846 N NA EPC1 EPC1 IMR90 Hi-C 24141950 EPC1 29962 98 chr10 32733556 32736431 32735047 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 97443 99 chr10 33269088 33271387 33269666 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 21795 100 chr10 3846460 3848714 3848101 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 18987 101 chr10 3852916 3854312 3853698 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6,AKR1E2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 25443 102 chr10 43855965 43859374 43857776 N NA HNRNPF FXYD4,HNRNPF,ZNF487P MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HNRNPF 45322 103 chr10 43914416 43917781 43916260 N NA HNRNPF,ZNF487P ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 9720 104 chr10 49513906 49516349 49514941 N NA NA FRMPD2,ARHGAP22 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MAPK8 93338 105 chr10 51514406 51518824 51515470,51517948 N,N NA;NA NCOA4 NA NA NA NA NCOA4 46284 106 chr10 6109677 6111745 6110527 Y GDI2,IL15RA,PFKFB3,PFKFB3,IL2RA,RBM17,RBM17 IL2RA,RBM17 IL2RA,LOC399715,RBM17 IMR90 Hi-C 24141950 IL2RA 5344 107 chr10 6441313 6443168 6441685 N NA NA IL2RA,PFKFB3,LOC399715,FBXO18,RBM17,IL15RA,PRKCQ IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC399715 121663 108 chr10 69523168 69524585 69524001 Y NA NA NA NA NA NA SIRT1 119842 109 chr10 69608719 69612276 69609258 Y NA SIRT1 SIRT1 K562 ChIA-PET 22265404 SIRT1 32151 110 chr10 6968179 6971705 6970149 Y SFMBT2,SFMBT2 NA SFMBT2,LOC100507127 IMR90 Hi-C 24141950 LOC439949 345792 111 chr10 70803400 70806252 70805024 N NA SRGN DDX21,KIAA1279,VPS26A,SRGN,HKDC1 IMR90 Hi-C 24141950 SRGN 41576 112 chr10 70824052 70826506 70825377 N NA SRGN KIAA1279,DDX21,SRGN,VPS26A,SUPV3L1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SRGN 21322 113 chr10 77190591 77196307 77191417 N NA ZNF503-AS2 ZNF503-AS2,ZNF503,C10orf11,KCNMA1 IMR90 Hi-C 24141950 ZNF503-AS2 29305 114 chr10 80061866 80063459 80062989 N NA NA ZMIZ1,RPS24,LOC283050,LOC100132987,POLR3A IMR90 Hi-C 24141950 RPS24 268348 115 chr10 88159446 88163989 88160124 Y NA NA WAPAL MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 WAPAL 117552 116 chr10 92918576 92929020 92923515 N NA NUDT9P1 ANKRD1,PCGF5,RPP30,NUDT9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 NUDT9P1 5739 117 chr10 94516235 94517914 94517101 Y HHEX,EXOC6 NA EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 66554 118 chr10 96942229 96944744 96943270 N NA NA SORBS1,C10orf129 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PDLIM1 106037 119 chr10 973970 984004 977830,976079 N,Y NA;NA LARP4B DIP2C,LARP4B,GTPBP4,IDI1,IDI2-AS1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LARP4B 42268 120 chr10 990203 991676 990644 Y WDR37 GTPBP4 LARP4B,DIP2C,GTPBP4,IDI2-AS1 IMR90 Hi-C 24141950 GTPBP4 42673 121 chr10 99164091 99166815 99166070 Y C10orf12,ARHGAP19,FRAT1,ZFYVE27,ZFYVE27,FRAT2,RRP12 RRP12,PGAM1,EXOSC1,ZDHHC16 EXOSC1,ZDHHC16,PGAM1,RRP12 MCF7,K562 ChIA-PET 22265404 RRP12 2964 122 chr11 104535053 104537994 104536665 N NA NA GRIA4 IMR90 Hi-C 24141950 CASP4 301331 123 chr11 104538843 104542345 104539924 N NA NA GRIA4 IMR90 Hi-C 24141950 CASP4 296980 124 chr11 104575237 104578162 104576685 Y CARD17,CASP5,CARD16,CASP4,CASP4 NA GRIA4 IMR90 Hi-C 24141950 CASP4 261163 125 chr11 10951732 10953962 10952824 N NA NA EIF4G2,MICALCL,LOC729013,ZBED5,CTR9,GALNTL4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC729013 71968 126 chr11 109939181 109941921 109940361 Y FDX1,ZC3H12C ZC3H12C ZC3H12C K562 ChIA-PET 22265404 ZC3H12C 22166 127 chr11 127908270 127910328 127909737 N NA NA KCNJ1,ETS1 IMR90 Hi-C 24141950 FLI1 653483 128 chr11 129147183 129151255 129149559 N NA NA ARHGAP32 IMR90 Hi-C 24141950 ARHGAP32 85090 129 chr11 1353276 1360659 1357574 N NA TOLLIP TOLLIP,LOC255512 K562 ChIA-PET 22265404 TOLLIP 22384 130 chr11 17228344 17235277 17229553 N NA PIK3C2A NA NA NA NA PIK3C2A 36990 131 chr11 33932830 33935074 33934280 N NA LMO2 LMO2 IMR90 Hi-C 24141950 LMO2 18994 132 chr11 33951232 33953423 33952096 N NA LMO2 LMO2 IMR90 Hi-C 24141950 LMO2 37396 133 chr11 34446735 34450119 34448361 N NA CAT ABTB2,ELF5,CAT IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CAT 10353 134 chr11 35069536 35073215 35072392 N NA NA CD44,PDHX,SLC1A2 IMR90 Hi-C 24141950 CD44 87202 135 chr11 35103776 35105429 35104714 Y CD44 NA CD44,PDHX,APIP,SLC1A2 IMR90 Hi-C 24141950 CD44 54988 136 chr11 46263832 46266484 46265012 Y NA NA DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF21A 120847 137 chr11 47410285 47418644 47415855 Y MADD,MADD,MADD,FNBP4,CELF1,CELF1,CELF1,CELF1,SPI1 MYBPC3,SPI1,SLC39A13,PSMC3 SPI1,SLC39A13 K562,MCF7 ChIA-PET 22265404 SPI1 10158 138 chr11 64215089 64221476 64216002 N NA NA SLC22A12,NRXN2,SLC22A11,RASGRP2,PYGM IMR90,K562,HELA Hi-C,5C 24141950,22955621 RPS6KA4 88464 139 chr11 64265679 64268376 64265879,64267315 N,Y NA;RASGRP2 NA NRXN2,RASGRP2,PYGM,SLC22A12,SLC22A11 IMR90,HELA,K562 Hi-C,5C 24141950,22955621 RPS6KA4 139054 140 chr11 64917106 64920072 64918348 N NA TM7SF2,ZNHIT2,MRPL49,FAU,SYVN1,CAPN1 SYVN1,CAPN1,SPDYC,GPHA2,C11orf85,SAC3D1,NAALADL1,ARL2-SNX15,ZFPL1,CDCA5,FAU,C11orf2,ZNHIT2,MRPL49,TM7SF2,SLC22A20,POLA2,CDC42EP2,DPF2,TIGD3,SLC25A45 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SYVN1 15103 141 chr11 65243032 65246748 65244494 N NA MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 18485 142 chr11 65259221 65261635 65260542 Y BATF2,FAU,CDC42EP2,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 3598 143 chr11 68619315 68624046 68622614 N NA CPT1A,MRPL21,IGHMBP2 CPT1A,PPP6R3,MTL5,IGHMBP2,MRPL21,MRGPRF,TPCN2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CPT1A 9916 144 chr11 72863943 72866676 72865382 Y FCHSD2 FCHSD2 STARD10,FCHSD2,ATG16L2,ARAP1,MIR4692,P2RY2,P2RY6,ARHGEF17 IMR90 Hi-C 24141950 FCHSD2 10800 145 chr11 72899582 72901004 72900562 N NA FCHSD2,P2RY2 FCHSD2,ATG16L2,ARHGEF17,P2RY2,P2RY6,ARAP1,STARD10 IMR90,MCF7 Hi-C,3C,ChIA-PET 24141950,19890323,22265404 P2RY2 28340 146 chr11 72915111 72917223 72916294 N NA P2RY2 FCHSD2,ATG16L2,P2RY6,ARAP1,RELT,PDE2A,STARD10,MIR4692,P2RY2,ARHGEF17 IMR90 Hi-C 24141950 P2RY2 12121 147 chr11 73490008 73491231 73490580 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 7686 148 chr11 75944911 75947697 75946302 Y NA WNT11 C11orf30,MAP6,UVRAG,WNT11,PRKRIR,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WNT11 27337 149 chr11 85913074 85914315 85914008 Y PICALM,PICALM EED PICALM,CCDC83,EED IMR90 Hi-C 24141950 EED 41491 150 chr11 88154451 88156246 88155005 Y NA NA GRM5 IMR90 Hi-C 24141950 CTSC 83510 151 chr11 9384564 9386593 9386122 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 19576 152 chr11 9634266 9637134 9635357 N NA WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 39038 153 chr12 105350978 105352688 105352132 N NA C12orf45 CHST11,SLC41A2,TXNRD1,C12orf45,ALDH1L2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C12orf45 27410 154 chr12 110516710 110518726 110517761 Y GIT2,RAD9B,C12orf76 NA C12orf76 K562 ChIA-PET 22265404 ANKRD13A 79475 155 chr12 111043024 111044760 111043698 Y ARPC3,PPTC7,HVCN1,HVCN1 PPTC7 GPN3,FAM216A,RAD9B,PPTC7,C12orf76,TCTN1,ARPC3,VPS29,HVCN1,PPP1CC IMR90 Hi-C 24141950 PPTC7 21960 156 chr12 116756906 116759041 116758020 N NA MED13L MED13L,MIR4472-2,LINC00173,C12orf49 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MED13L 41915 157 chr12 116762067 116763398 116762945 N NA MED13L MED13L,MIR4472-2,LINC00173,C12orf49 IMR90 Hi-C 24141950 MED13L 47076 158 chr12 117038269 117040528 117039506 Y MED13L,MAP1LC3B2 NA MED13L,MIR4472-2,LINC00173,MAP1LC3B2 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 LINC00173 67029 159 chr12 117072204 117075716 117073527 N NA NA MED13L,FBXW8,MAP1LC3B2,LINC00173 IMR90 Hi-C 24141950 C12orf49 100127 160 chr12 117079229 117081927 117080447 N NA NA MED13L,MAP1LC3B2 IMR90 Hi-C 24141950 C12orf49 93916 161 chr12 117113599 117116697 117114947 N NA NA MED13L,C12orf49 IMR90 Hi-C 24141950 C12orf49 59146 162 chr12 117128783 117132175 117131026 N NA C12orf49 NA NA NA NA C12orf49 43668 163 chr12 120727440 120731257 120730417 N NA PXN,SIRT4 PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SIRT4 8867 164 chr12 121565693 121567869 121566939 N NA P2RX7 P2RX4,P2RX7 MCF7,K562 ChIA-PET 22265404 P2RX7 2753 165 chr12 12161609 12165257 12163611 N NA NA ETV6,LOC338817,CDKN1B IMR90 Hi-C 24141950 LOH12CR2 344744 166 chr12 12184854 12187624 12185900 Y ETV6,BCL2L14 NA ETV6,LOC338817,CDKN1B,BCL2L14,MANSC1,LOH12CR2,LOH12CR1,GPR19 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOH12CR2 322377 167 chr12 122028209 122029215 122028772 Y RNF34,KDM2B,SETD1B,RHOF,ORAI1 KDM2B,ORAI1 KDM2B,ANAPC5,CAMKK2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KDM2B 9289 168 chr12 125197289 125199076 125198160 N NA NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 NCOR2 145279 169 chr12 125352419 125354539 125354121 N NA SCARB1,UBC NA NA NA NA SCARB1 3900 170 chr12 125404633 125406656 125406107 N NA UBC NCOR2,SCARB1,UBC IMR90 Hi-C 24141950 UBC 5046 171 chr12 125533474 125535597 125534304 Y NA AACS AACS K562,MCF7 ChIA-PET 22265404 AACS 14328 172 chr12 133020856 133022011 133021688 Y POLE,DDX51,FBRSL1 FBRSL1 LOC100507055,FBRSL1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FBRSL1 45146 173 chr12 13316950 13320026 13318681 N NA EMP1 EMP1,APOLD1,KIAA1467,GSG1,HTR7P1 IMR90 Hi-C 24141950 EMP1 29576 174 chr12 13325250 13327374 13326593 Y EMP1 EMP1 HTR7P1,EMP1,HEBP1,KIAA1467,GSG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EMP1 22228 175 chr12 13331723 13333763 13332784 Y NA EMP1 EMP1,KIAA1467 IMR90 Hi-C 24141950 EMP1 15839 176 chr12 25537373 25540424 25539213 Y NA NA BCAT1,CASC1,KRAS,LYRM5,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 133519 177 chr12 28341480 28345690 28344067 N NA NA KLHDC5,CCDC91 IMR90 Hi-C 24141950 CCDC91 64443 178 chr12 29297630 29307122 29302416 N NA NA NA NA NA NA ERGIC2 227021 179 chr12 32551585 32553398 32552393 N NA NA BICD1,FGD4 IMR90 Hi-C 24141950 DNM1L 278739 180 chr12 32635997 32637709 32636666 Y NA NA FGD4 IMR90 Hi-C 24141950 DNM1L 194428 181 chr12 33786504 33788739 33787713 N NA NA NA NA NA NA ALG10 386477 182 chr12 42325293 42327044 42326454 N NA NA PDZRN4 IMR90 Hi-C 24141950 GXYLT1 211629 183 chr12 4251189 4252899 4252306 Y EFCAB4B,PARP11,CCND2,C12orf4 NA CCND2 IMR90 Hi-C 24141950 CCND2 130003 184 chr12 4272959 4274745 4274136 Y CCND2 NA NA NA NA NA CCND2 108157 185 chr12 46775971 46779090 46777339 N NA SLC38A2 SLC38A1 K562,MCF7 ChIA-PET 22265404 SLC38A2 9326 186 chr12 46866789 46868252 46867550 Y NA NA SLC38A2,SLC38A4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 100144 187 chr12 49625295 49629937 49628041 N NA TUBA1A,TUBA1C RHEBL1,DHH,LMBR1L,TUBA1A,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 28928 188 chr12 50443004 50445064 50444479 N NA RACGAP1,ACCN2,SMARCD1 SMARCD1,TMBIM6,NCKAP5L,LOC100286844,BCDIN3D,LOC283332,FAIM2,AQP6,AQP2,RACGAP1,AQP5,ACCN2,GPD1,CERS5,COX14,LARP4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ACCN2 6423 189 chr12 53267254 53269125 53267796 Y PFDN5 NA KRT18,KRT8,LOC283403,KRT80,EIF4B,LOC283404 MCF7 ChIA-PET 22265404 KRT18 73530 190 chr12 53759337 53760709 53760535 N NA AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SP1 13270 191 chr12 53763778 53766924 53764931 N NA AAAS,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 7055 192 chr12 54144125 54147067 54145505 Y NA CALCOCO1 ATF7,ATP5G2,CALCOCO1,CBX5,HOXC8,MIR196A2,HOXC9,SMUG1,HNRNPA1,HOXC10 IMR90 Hi-C 24141950 CALCOCO1 22818 193 chr12 54821434 54824850 54822490 N NA ZNF385A,ITGA5 ZNF385A,ITGA5,CBX5,HNRNPA1,NFE2,GTSF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ITGA5 8384 194 chr12 57810765 57826043 57824698 N NA ARHGAP9 R3HDM2,SHMT2,NDUFA4L2,STAC3,INHBE,GLI1,INHBC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARHGAP9 47590 195 chr12 58258311 58259702 58259221 Y TSPAN31,CDK4,METTL21B,CTDSP2 AVIL,CTDSP2 CTDSP2 MCF7 ChIA-PET 22265404 CTDSP2 17564 196 chr12 59988700 59994349 59990608 N NA NA NA NA NA NA XRCC6BP1 1653255 197 chr12 6249700 6251312 6250315 Y VAMP1,TNFRSF1A,TAPBPL,IFFO1,CHD4 NA VWF,CD9 IMR90 Hi-C 24141950 CD9 58170 198 chr12 62644286 62645488 62645048 N NA USP15 USP15 MCF7 ChIA-PET 22265404 USP15 8633 199 chr12 68757065 68760753 68759175 Y IFNG,RAP1B MDM1 RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MDM1 30904 200 chr12 68774370 68776350 68775052 N NA MDM1 RAP1B IMR90 Hi-C 24141950 MDM1 48209 201 chr12 69724529 69725859 69725114 N NA YEATS4 YEATS4 K562 ChIA-PET 22265404 YEATS4 27673 202 chr12 7143475 7145279 7144166 N NA LPCAT3 NA NA NA NA LPCAT3 17633 203 chr12 75865098 75867353 75866103 N NA GLIPR1,KRR1 NA NA NA NA GLIPR1 7160 204 chr12 8121883 8124447 8123413 Y CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC2A3 32991 205 chr12 8142126 8143268 8142852 N NA FOXJ2 FOXJ2 IMR90 Hi-C 24141950 FOXJ2 42091 206 chr12 8171034 8172134 8171676 N NA FOXJ2 SLC2A14,FOXJ2 IMR90 Hi-C 24141950 FOXJ2 13225 207 chr12 8178393 8180365 8179597 N NA FOXJ2 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 4994 208 chr12 96570416 96571649 96570979 Y LTA4H,ELK3 ELK3 LTA4H IMR90 Hi-C 24141950 ELK3 16558 209 chr13 103240175 103244830 103244486 N NA TPP2 BIVM-ERCC5,TEX30,METTL21C,TPP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPP2 4456 210 chr13 108918274 108919888 108918848 Y TNFSF13B,LIG4,ABHD13 LIG4,ABHD13,TNFSF13B NA NA NA NA TNFSF13B 2089 211 chr13 113259934 113261395 113260806 N NA TUBGCP3 ATP11A,TUBGCP3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TUBGCP3 17453 212 chr13 21648562 21650913 21649849 N NA LATS2 LATS2,SAP18 IMR90 Hi-C 24141950 LATS2 12840 213 chr13 21791612 21795816 21793635 N NA MRP63,SKA3 NA NA NA NA SKA3 40871 214 chr13 21870718 21873872 21872636 N NA NA ZDHHC20 MCF7 ChIA-PET 22265404 SKA3 119977 215 chr13 21877752 21881638 21878605,21880790 N,N NA;NA NA NA NA NA NA SKA3 127011 216 chr13 21910598 21920163 21919219 N NA NA ZDHHC20 IMR90 Hi-C 24141950 ZDHHC20 113345 217 chr13 25115931 25116458 25116203 N NA PARP4 NA NA NA NA PARP4 28983 218 chr13 27556262 27558404 27557401 Y USP12,RPL21,RASL11A NA RASL11A,USP12,RPL21,MTIF3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP12 187629 219 chr13 30968317 30970268 30969369 N NA LINC00426 LINC00426,KATNAL1,HMGB1,USPL1,UBL3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00426 20281 220 chr13 30991349 30998111 30996114 N NA LINC00426,HMGB1 USPL1,KATNAL1,LINC00426,HMGB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HMGB1 41970 221 chr13 32598457 32603210 32599684 N NA FRY FRY,BRCA2,EEF1DP3,ZAR1L,N4BP2L2 IMR90 Hi-C 24141950 FRY 2227 222 chr13 36990916 36993246 36992407 Y SPG20,SPG20 NA NA NA NA NA RFXAP 400093 223 chr13 44714691 44717289 44716284,44716311 N,N NA;NA NA TSC22D1,SERP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC122 260865 224 chr13 45491467 45493168 45492131 N NA NA NA NA NA NA NUFIP1 70445 225 chr13 46784441 46787155 46786004 N NA LCP1 NA NA NA NA LCP1 27982 226 chr13 49152150 49154290 49153508 Y FNDC3A,ITM2B,RB1,LPAR6,RCBTB2 RCBTB2 ITM2B,RB1 IMR90 Hi-C 24141950 RCBTB2 44834 227 chr13 49440081 49441749 49440646 N NA NA FNDC3A,MLNR IMR90 Hi-C 24141950 FNDC3A 108299 228 chr13 50527468 50533684 50532517 N NA SPRYD7,TRIM13 NA NA NA NA SPRYD7 16843 229 chr13 51465900 51468721 51467833,51466429 Y,Y RNASEH2B;RNASEH2B RNASEH2B DLEU2,GUCY1B2,DLEU1 IMR90 Hi-C 24141950 RNASEH2B 15093 230 chr13 89571209 89573096 89572309 N NA NA NA NA NA NA MIR17HG 2426978 231 chr14 100632715 100633674 100633084 N NA DEGS2 NA NA NA NA DEGS2 6703 232 chr14 100657920 100660585 100659717 N NA DEGS2,YY1 DEGS2,YY1,EVL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DEGS2 31908 233 chr14 100668211 100681427 100680632 N NA DEGS2,YY1 DEGS2,EVL,YY1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 YY1 23675 234 chr14 101585656 101588434 101587618 N NA NA DIO3OS,LINC00523,MIR127,MIR433,MIR337,MIR432,MIR665,RTL1,MIR136,MEG8,MIR493,MIR431,MIR412,MIR541,MIR409,MIR410,MIR369,MIR656 IMR90 Hi-C 24141950 PPP2R5C 639701 235 chr14 102990724 102992008 102991350 Y NA ANKRD9 ANKRD9,RCOR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANKRD9 14596 236 chr14 105558546 105561564 105559919 N NA GPR132 BTBD6,BRF1,JAG2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GPR132 26792 237 chr14 106551293 106553893 106552224 N NA NA NA NA NA NA KIAA0125 167455 238 chr14 106558880 106560839 106560036 N NA NA NA NA NA NA KIAA0125 175042 239 chr14 107249930 107255422 107252736 N NA NA NA NA NA NA KIAA0125 866092 240 chr14 22538420 22539855 22539114 N NA NA NA NA NA NA DAD1 518288 241 chr14 22882145 22905453 22887784,22896983,22891461,22901861,22901984,22904480 N,N,N,N,N,N NA;NA;NA;NA;NA;NA NA OXA1L,SLC7A7,DAD1 IMR90 Hi-C 24141950 DAD1 152690 242 chr14 22915508 22920556 22917465,22919693 N,N NA;NA NA OXA1L,SLC7A7 IMR90 Hi-C 24141950 DAD1 137587 243 chr14 22924471 22933804 22929605,22926278 N,N NA;NA NA SLC7A7 IMR90 Hi-C 24141950 DAD1 124339 244 chr14 50327303 50331423 50330372,50328416 N,N NA;NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 7764 245 chr14 50333661 50336168 50334952 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 METTL21D,SOS2,ARF6,C14orf182,NEMF,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 14122 246 chr14 55574404 55575851 55575100 Y GCH1,MAPK1IP1L,FBXO34,FBXO34,LGALS3 LGALS3 MAPK1IP1L IMR90 Hi-C 24141950 LGALS3 20084 247 chr14 71786078 71788514 71787475 N NA NA SIPA1L1,PCNX IMR90 Hi-C 24141950 PCNX 411956 248 chr14 75648450 75652190 75650316,75651175 N,N NA;NA TMED10 TMED10,LOC731223,FOS,RPS6KL1,NEK9 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 TMED10 5101 249 chr14 75723351 75727240 75725881 N NA FOS,LOC731223 TMED10,RPS6KL1,EIF2B2,NEK9,LOC731223,FOS,JDP2,BATF,PGF IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOS 18241 250 chr14 75800046 75802122 75800659 N NA LOC731223 JDP2,BATF IMR90 Hi-C 24141950 LOC731223 38939 251 chr14 75808069 75809264 75808425 N NA LOC731223 JDP2,BATF IMR90 Hi-C 24141950 LOC731223 46962 252 chr14 75981179 75982754 75981603 N NA BATF JDP2,BATF,FLVCR2,ZC2HC1C,TMED10,NEK9,LOC731223,C14orf1 IMR90 Hi-C 24141950 BATF 6030 253 chr14 77497883 77501392 77499929 Y VASH1,C14orf166B,IRF2BPL IRF2BPL KIAA1737,POMT2,GSTZ1 MCF7 ChIA-PET 22265404 IRF2BPL 2849 254 chr14 77503184 77508586 77504609,77506619 Y,N NA;NA IRF2BPL IRF2BPL IMR90 Hi-C 24141950 IRF2BPL 8150 255 chr14 78106935 78109083 78108252 N NA SPTLC2 NA NA NA NA SPTLC2 23825 256 chr14 90847777 90851006 90849970 N NA C14orf102,CALM1 C14orf102,CALM1,TTC7B,EFCAB11,TDP1,PSMC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CALM1 12321 257 chr15 101666270 101669554 101667663 N NA NA CHSY1,LRRK1,SELS IMR90 Hi-C 24141950 CHSY1 122583 258 chr15 25017736 25018710 25018392 Y SNURF,SNRPN,SNRPN,SNRPN NA NA NA NA NA PAR-SN 208431 259 chr15 26326933 26328486 26327558 Y NA NA LOC100128714,ATP10A IMR90 Hi-C 24141950 ATP10A 218584 260 chr15 31557682 31559783 31558623 Y MTMR10,KLF13 NA LOC283710,OTUD7A,KLF13 IMR90 Hi-C 24141950 KLF13 59300 261 chr15 31726374 31728020 31727547 N NA NA KLF13 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 107291 262 chr15 42782080 42784733 42783385 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 2771 263 chr15 43413100 43415700 43415289 Y NA UBR1,TMEM62 UBR1 K562 ChIA-PET 22265404 TMEM62 10022 264 chr15 50426005 50428517 50427447 N NA ATP8B4,SLC27A2 ATP8B4,GALK2,GABPB1,SHC4 IMR90 Hi-C 24141950 ATP8B4 14586 265 chr15 52272892 52274915 52274208 N NA LEO1,MAPK6 MAPK6,GNB5,MYO5C,BCL2L10 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LEO1 8934 266 chr15 62676805 62684705 62682702 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 VPS13C 324141 267 chr15 65186322 65189275 65187169 Y ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16 NA SPG21 IMR90 Hi-C 24141950 PLEKHO2 52240 268 chr15 65587655 65589586 65588267 N NA PARP16 MTFMT,IGDCC4,PDCD7,RASL12,IGDCC3,OSTBETA,CILP,PARP16,CLPX,UBAP1L,DPP8,PTPLAD1,SPG21,KBTBD13 MCF7,K562 ChIA-PET 22265404 PARP16 8637 269 chr15 65595665 65598659 65596918 Y DENND4A PARP16 PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARP16 16647 270 chr15 66096529 66097657 66097203 N NA DENND4A SLC24A1,DENND4A IMR90 Hi-C 24141950 DENND4A 11898 271 chr15 66124413 66126832 66125361 N NA DENND4A,RAB11A SLC24A1,DENND4A,PTPLAD1,C15orf44,RAB11A,MEGF11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB11A 34965 272 chr15 66909350 66910651 66910088 Y SMAD3,MAP2K1 NA SMAD6 IMR90 Hi-C 24141950 SMAD6 84023 273 chr15 67134139 67136064 67135014 N NA NA SMAD6,SNAPC5 IMR90 Hi-C 24141950 SMAD6 139465 274 chr15 67212991 67214967 67213810 N NA NA LOC100506686,IQCH,SKOR1,AAGAB,C15orf61,SMAD3,SMAD6,MAP2K5 IMR90 Hi-C 24141950 SMAD3 143228 275 chr15 68175626 68177802 68177218 N NA NA PIAS1,CLN6,CALML4,C15orf61,LOC100506686,IQCH IMR90 Hi-C 24141950 SKOR1 57685 276 chr15 77196367 77198109 77197725 N NA SCAPER,RCN2 ETFA IMR90 Hi-C 24141950 SCAPER 20150 277 chr15 93362619 93364701 93363704 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 NA ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 LOC100507217 61372 278 chr15 93373174 93376887 93375225 Y NA LOC100507217 LOC100507217,CHD2,ASB9P1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100507217 49186 279 chr15 94747907 94751572 94750097 Y NA NA NA NA NA NA MCTP2 89858 280 chr15 94772747 94786522 94773953,94777709 N,N NA;NA NA MCTP2 IMR90 Hi-C 24141950 MCTP2 54908 281 chr15 99557727 99559742 99558293 N NA NA PGPEP1L MCF7 ChIA-PET 22265404 LRRC28 231910 282 chr16 10962079 10963844 10962684 Y NUBP1,SOCS1,CIITA CIITA CIITA IMR90 Hi-C 24141950 CIITA 7211 283 chr16 11326060 11327801 11327028 Y SNN,LITAF,LITAF,NUBP1,CIITA,SOCS1 SOCS1 CLEC16A IMR90 Hi-C 24141950 SOCS1 22238 284 chr16 11592021 11592738 11592722 N NA NA SNN,TXNDC11,CLEC16A,LITAF IMR90 Hi-C 24141950 LITAF 88584 285 chr16 11690541 11693137 11691463 Y SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN LITAF LITAF MCF7 ChIA-PET 22265404 LITAF 9219 286 chr16 13519109 13520886 13520181 N NA NA NA NA NA NA ERCC4 493128 287 chr16 20755667 20759664 20756279,20758705 N,N NA;NA THUMPD1 NA NA NA NA THUMPD1 2468 288 chr16 22206745 22207826 22207044 Y NA EEF2K POLR3E,EEF2K,UQCRC2,PDZD9,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 9766 289 chr16 25076990 25079724 25078191 N NA LCMT1 LCMT1,LOC100506655,TNRC6A,ARHGAP17,SLC5A11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LCMT1 43323 290 chr16 25116367 25119844 25118236 N NA LCMT1 ARHGAP17,LCMT1,ZKSCAN2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LCMT1 3203 291 chr16 28824621 28827073 28825940 N NA ATXN2L,TUFM,SH2B1 ATXN2L,TUFM,RABEP2,CD19,NFATC2IP,SPNS1,ATP2A1,SH2B1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATXN2L 7341 292 chr16 29163620 29165144 29164333 N NA NA SPNS1,RRN3P2 IMR90 Hi-C 24141950 RRN3P2 77457 293 chr16 29167423 29170841 29168448 Y SPNS1 NA RRN3P2 IMR90 Hi-C 24141950 RRN3P2 81260 294 chr16 2917284 2918871 2918344 N NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 14325 295 chr16 30469105 30471468 30470435 N NA DCTPP1,SEPHS2,ITGAL ZNF771,DCTPP1,SEPHS2,ZNF688,PRR14,ZNF764,ITGAL,ZNF689,ZNF747,ZNF785,ZNF768,SRCAP IMR90 Hi-C 24141950 SEPHS2 11881 296 chr16 30644370 30652239 30645737 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF785,ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRR14 10002 297 chr16 30815754 30821840 30817161 N NA RNF40,C16orf93,ZNF629 C16orf93,PHKG2,RNF40,ZNF629,MIR762,BCL7C,CTF1,MIR4519,FBXL19-AS1,FBXL19,SRCAP IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF629 17231 298 chr16 4341414 4358264 4357698 Y CORO7 LOC100507501,TFAP4,GLIS2,PAM16 CREBBP,ADCY9,SRL,VASN,GLIS2,PAM16,CORO7-PAM16,TRAP1,TFAP4,LOC100507501,HMOX2,NMRAL1,DNAJA3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TFAP4 18413 299 chr16 57332699 57334314 57333853 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,POLR2C,DOK4,CCDC102A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,GPR114 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 53661 300 chr16 72235384 72238285 72237556 Y AP1G1,ATXN1L,KIAA0174,DHX38 NA HPR,PMFBP1,LOC100506172 IMR90 Hi-C 24141950 TXNL4B 107169 301 chr16 72696656 72699937 72698938 N NA NA ZFHX3 IMR90 Hi-C 24141950 ZFHX3 392597 302 chr16 73155936 73157477 73156775 N NA NA ZFHX3 IMR90 Hi-C 24141950 ZFHX3 63402 303 chr16 77223555 77228138 77224925 N NA SYCE1L NA NA NA NA SYCE1L 5211 304 chr16 77712558 77714715 77713424 N NA NUDT7 CLEC3A,WWOX,VAT1L IMR90 Hi-C 24141950 NUDT7 41674 305 chr16 81785585 81786652 81786006 Y PLCG2,CMIP,CMIP PLCG2 ATMIN,PKD1L2,GAN,BCMO1,MIR4720 IMR90 Hi-C 24141950 PLCG2 26247 306 chr16 85568588 85571097 85569848 Y NA NA KIAA0182,LOC727710 IMR90 Hi-C 24141950 KIAA0182 73932 307 chr16 85582844 85605967 85587955,85590527,85604514 N,N,Y NA;NA;NA KIAA0182 GINS2,KIAA0182,LINC00311,LOC400548,FAM92B,KIAA0513,LOC727710,C16orf74,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0182 39062 308 chr16 89103935 89124014 89119465 N NA ACSF3 ACSF3,CBFA2T3,LOC400558,LINC00304,CDH15,PIEZO1,SLC22A31,TRAPPC2L,GALNS IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACSF3 36203 309 chr16 89563434 89571475 89565310 N NA ANKRD11,SPG7 ANKRD11,SPG7,LOC100287036,RPL13 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SPG7 3330 310 chr17 1131785 1133677 1133048 N NA ABR ABR,CRK,YWHAE,INPP5K,LOC100306951,PITPNA,SCARF1,RILP IMR90 Hi-C 24141950 ABR 41169 311 chr17 14199584 14201953 14200945 N NA HS3ST3B1 NA NA NA NA HS3ST3B1 2553 312 chr17 14507521 14509255 14508745 Y HS3ST3B1 NA NA NA NA NA HS3ST3B1 303015 313 chr17 16938964 16940546 16940041 N NA MPRIP NA NA NA NA MPRIP 5528 314 chr17 19014389 19015001 19014855 N NA NA NA NA NA NA PRPSAP2 254777 315 chr17 21177883 21180356 21179224 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 C17orf103,MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 7612 316 chr17 25570590 25572759 25572030 Y LGALS9,WSB1 WSB1 KSR1,WSB1,MIR4522 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 WSB1 48347 317 chr17 25675043 25677641 25676454 N NA NA KSR1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WSB1 53937 318 chr17 25679560 25681675 25680691 Y NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 58454 319 chr17 25693439 25695464 25694823 N NA NA KSR1 IMR90 Hi-C 24141950 WSB1 72333 320 chr17 25784204 25787121 25784876 Y WSB1,LGALS9 KSR1 KSR1 MCF7 ChIA-PET 22265404 KSR1 11915 321 chr17 2692879 2696270 2694552 N NA RAP1GAP2 NA NA NA NA RAP1GAP2 3462 322 chr17 29029471 29034262 29033175 N NA SUZ12P NA NA NA NA SUZ12P 2364 323 chr17 29923051 29924381 29923819 Y EVI2A NA NA NA NA NA C17orf79 261945 324 chr17 30453891 30455362 30454575 N NA RHOT1 RHOT1,LRRC37B IMR90 Hi-C 24141950 RHOT1 14111 325 chr17 35077404 35080159 35078283 N NA NA LHX1,AATF,ACACA,MRM1,DHRS11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MRM1 119379 326 chr17 39822359 39823479 39822869 Y NA EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 21648 327 chr17 40201889 40203756 40202525 N NA NKIRAS2,DNAJC7 HSPB9,KAT2A,RAB5C K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 DNAJC7 32174 328 chr17 41396296 41402140 41400498 N NA TMEM106A BRCA1,NBR2,IFI35,RND2,VAT1,NBR1,TMEM106A,LOC100130581,DHX8 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 32402 329 chr17 41796451 41798705 41798213 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 DUSP3 57663 330 chr17 44343014 44345361 44344626 N NA KANSL1 KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KANSL1 40274 331 chr17 49008227 49009794 49008929 N NA NA WFIKKN2,TOB1,LOC400604,LINC00483,ANKRD40,SPAG9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 62888 332 chr17 62708908 62710576 62710029 N NA NA SMURF2,LOC146880 IMR90 Hi-C 24141950 SMURF2 50522 333 chr17 62918874 62920153 62919338 Y NA NA LRRC37A3,RGS9 IMR90 Hi-C 24141950 AMZ2P1 51550 334 chr17 63117623 63120241 63119523 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 64703 335 chr17 66015463 66017044 66016193 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 14804 336 chr17 72977600 72979032 72978434 Y KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L CDR2L,ICT1 CDR2L,ICT1,C17orf28,HN1 MCF7,K562 ChIA-PET 22265404 CDR2L 4695 337 chr17 75953351 75956912 75954580 Y NA TNRC6C TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNRC6C 43406 338 chr17 76258490 76260294 76259449 N NA BIRC5 TNRC6C,LOC100131096,TK1,AFMID,CYTH1 IMR90 Hi-C 24141950 BIRC5 48213 339 chr17 76309549 76311181 76310123 Y CYTH1,SOCS3,PGS1 SOCS3 PGS1,DNAH17,SOCS3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS3 44977 340 chr17 76319418 76322480 76320775 Y CYTH1,SOCS3,PGS1 SOCS3 SOCS3 IMR90 Hi-C 24141950 SOCS3 33678 341 chr17 76588152 76589014 76588600 Y NA NA DNAH17,CYTH1,USP36 IMR90 Hi-C 24141950 CYTH1 189362 342 chr17 7892905 7893951 7893435 N NA NA CHD3,EFNB3,DNAH2,KDM6B,CNTROB,KCNAB3,TRAPPC1,GUCY2D,ALOX15B,LOC284023 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CNTROB 57463 343 chr17 79923620 79927175 79925258 N NA SIRT7,MAFG,MAFG-AS1,PYCR1,NOTUM,ASPSCR1 ASPSCR1 K562,MCF7 ChIA-PET 22265404 NOTUM 4563 344 chr17 81140669 81149243 81142157,81148090 N,Y NA;METRNL NA METRNL,B3GNTL1,TBCD MCF7 ChIA-PET 22265404 METRNL 103102 345 chr18 10287884 10291827 10290396 Y NAPG,VAPA NA APCDD1,VAPA IMR90 Hi-C 24141950 NAPG 234046 346 chr18 11945893 11950266 11947673 Y CHMP1B MPPE1,IMPA2 IMPA2,GNAL IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IMPA2 31161 347 chr18 1578111 1580108 1578688 N NA NA NA NA NA NA YES1 765784 348 chr18 24234718 24238025 24237078 N NA NA TAF4B,KCTD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SS18 564107 349 chr18 29303420 29303734 29303427 N NA B4GALT6 NA NA NA NA B4GALT6 38734 350 chr18 3015509 3017212 3016708 Y TGIF1,TGIF1,MYL12A,SMCHD1,EMILIN2,LPIN2 LPIN2 LPIN2,MYOM1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LPIN2 3564 351 chr18 33160547 33165992 33161171 N NA NA NA NA NA NA GALNT1 68541 352 chr18 43354539 43356889 43355501 N NA NA SLC14A1,EPG5,SIGLEC15 IMR90 Hi-C 24141950 EPG5 190416 353 chr18 47833409 47835451 47834421 Y CCDC11,MBD1,MBD1 CCDC11,MBD1,CXXC1 CCDC11,CXXC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CXXC1 18717 354 chr18 517983 520479 519163 N NA NA COLEC12,CLUL1 IMR90 Hi-C 24141950 TYMS 137125 355 chr18 60087602 60088825 60088180 Y KIAA1468,ZCCHC2 NA PHLPP1,ZCCHC2,TNFRSF11A,BCL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFRSF11A 95054 356 chr18 60741890 60743023 60742288 N NA NA NA NA NA NA BCL2 243590 357 chr18 60766316 60768761 60767483 Y NA NA NA NA NA NA BCL2 217852 358 chr18 68131625 68132812 68132248 N NA NA NA NA NA NA SOCS6 175488 359 chr18 74215231 74216456 74215751 N NA ZNF516,LOC284276 ZNF516 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF516 8085 360 chr18 74229480 74231503 74230756 Y NA ZNF516,LOC284276 ZNF516,LOC284276 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC284276 9109 361 chr18 74236428 74238181 74237219 N NA ZNF516,LOC284276 NA NA NA NA LOC284276 2431 362 chr18 74308156 74317895 74311423 N NA NA LOC284276,ZNF516,ZNF407 IMR90 Hi-C 24141950 LOC284276 67544 363 chr18 74331194 74335368 74332187 N NA NA ZNF516,LOC284276,ZNF407 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC284276 90582 364 chr18 77556916 77566811 77558584 Y NA NA KCNG2,PQLC1,CTDP1,RBFA,TXNL4A,ATP9B,NFATC1,HSBP1L1 IMR90 Hi-C 24141950 KCNG2 56857 365 chr18 8703379 8708630 8705137,8706845 N,N NA;NA CCDC165 CCDC165,NDUFV2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC165 8739 366 chr18 9433108 9435802 9434051 N NA RALBP1 ANKRD12,TWSG1,CCDC165 IMR90 Hi-C 24141950 RALBP1 39728 367 chr19 11750069 11751295 11750778 N NA ZNF627,ZNF833P NA NA NA NA ZNF833P 33518 368 chr19 11771727 11775762 11773653 N NA ZNF833P ZNF833P,ZNF823,ZNF441 IMR90 Hi-C 24141950 ZNF833P 9051 369 chr19 12605222 12607586 12606473 N NA ZNF709 ZNF709,ZNF823,ZNF491,ZNF441,ZNF439,ZNF433,ZNF878,ZNF788,ZNF844,ZNF20,ZNF625-ZNF20,ZNF44,ZNF563,ZNF442,ZNF443,ZNF564 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF709 9590 370 chr19 13839820 13843847 13841837 N NA CCDC130,MRI1,C19orf53 CACNA1A IMR90 Hi-C 24141950 CCDC130 14906 371 chr19 14479483 14482306 14481298 N NA CD97,DDX39A NA NA NA NA CD97 9650 372 chr19 14484888 14487428 14486074 Y NA CD97,DDX39A DDX39A K562 ChIA-PET 22265404 CD97 4528 373 chr19 1896464 1898284 1897756 N NA REXO1,KLF16,FAM108A1,SCAMP4,CSNK1G2 KLF16,SCAMP4,MKNK2 K562 ChIA-PET 22265404 SCAMP4 7089 374 chr19 19076642 19078229 19077463 N NA COPE,DDX49,HOMER3 NA NA NA NA HOMER3 24601 375 chr19 23257659 23262734 23258217 N NA NA NA NA NA NA ZNF724P 170438 376 chr19 23299939 23302546 23300260 N NA NA NA NA NA NA ZNF724P 130626 377 chr19 23455687 23457378 23457073 N NA ZNF724P NA NA NA NA ZNF724P 22515 378 chr19 24215921 24219620 24216633 N NA NA NA NA NA NA ZNF254 50356 379 chr19 24360860 24367022 24361013 N NA NA NA NA NA NA ZNF254 90884 380 chr19 2461398 2464619 2462172 N NA TIMM13,LMNB2,GADD45B LMNB2,GADD45B MCF7,K562 ChIA-PET 22265404 LMNB2 4440 381 chr19 30214686 30216393 30215404 Y NA C19orf12 NA NA NA NA C19orf12 7990 382 chr19 30336373 30337441 30336772 Y C19orf2,C19orf2 CCNE1 NA NA NA NA CCNE1 33472 383 chr19 33750559 33753176 33752053 N NA CEBPA,LOC80054 CHST8,PEPD,LOC80054,CEBPA IMR90 Hi-C 24141950 CEBPA 40254 384 chr19 34624986 34626559 34625426 N NA LSM14A CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD IMR90 Hi-C 24141950 LSM14A 36793 385 chr19 36421061 36422478 36421750 N NA NFKBID,HCST,TYROBP NFKBID,HCST MCF7 ChIA-PET 22265404 TYROBP 21850 386 chr19 37707678 37710360 37709178 N NA ZNF585A,ZNF585B,ZNF383 ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF585B 6227 387 chr19 37806552 37810004 37808765 N NA HKR1 NA NA NA NA HKR1 15576 388 chr19 42035641 42038045 42037675 N NA NA CEACAM21,LOC100505495 IMR90 Hi-C 24141950 C19orf69 86578 389 chr19 42051381 42053390 42052485 N NA NA C19orf69,ATP5SL,LOC100505495 IMR90 Hi-C 24141950 C19orf69 102318 390 chr19 42055082 42070105 42055656,42061434 N,N NA;NA NA LOC100505495,CEACAM21,ATP5SL,C19orf69 IMR90 Hi-C 24141950 C19orf69 106019 391 chr19 44711196 44712212 44711646 Y NA ZNF226,ZNF227 NA NA NA NA ZNF227 4479 392 chr19 45946500 45949655 45947520 N NA CD3EAP,PPP1R13L,ERCC1,FOSB ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ERCC1 19323 393 chr19 47362408 47367771 47363881,47366426 Y,N PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35;NA AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 AP2S1 8205 394 chr19 48102803 48105161 48103703 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLTSCR1 6292 395 chr19 482354 491693 489092 N NA TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 TPGS1 15804 396 chr19 50871580 50873404 50872350 N NA NR1H2,POLD1,SPIB NA NA NA NA NR1H2 6276 397 chr19 53399368 53401672 53400959 N NA ZNF468,ZNF320,ZNF321P ZNF468,ZNF160 IMR90 Hi-C 24141950 ZNF320 4769 398 chr19 54879646 54883534 54881121 N NA LAIR1 PRKCG,CACNG7,CACNG6,VSTM1,TSEN34,MBOAT7,RPS9 K562,HELA 5C 22955621 LAIR1 2925 399 chr19 54884585 54886549 54885421 Y VSTM1,OSCAR,LILRB3,LILRA6,LILRB2,KIR3DL3,LILRB4,LILRB1,LILRB1,LILRA2,LILRA1,LENG8,LAIR2,FCAR,LILRA3,LILRA3,LILRA5,LAIR1 LAIR1 PRKCG,CACNG7,CACNG6,VSTM1,TSEN34,MBOAT7,RPS9 K562,HELA 5C 22955621 LAIR1 7864 400 chr19 54898216 54901680 54900213 N NA LAIR1 NA NA NA NA LAIR1 21495 401 chr19 56824579 56828331 56825331,56826488 N,N NA;NA NA NA NA NA NA ZNF542 51137 402 chr19 56832098 56834227 56833428 Y ZSCAN5A ZNF542 NA NA NA NA ZNF542 45241 403 chr19 6516070 6516934 6516313 N NA DENND1C TNFSF9 K562 ChIA-PET 22265404 DENND1C 34272 404 chr19 7412444 7416327 7414503 N NA ARHGEF18 ZNF557,INSR IMR90 Hi-C 24141950 ARHGEF18 43672 405 chr19 9419079 9421124 9420513 Y NA ZNF699,ZNF559-ZNF177 NA NA NA NA ZNF699 3284 406 chr19 9895218 9897487 9896818 N NA ZNF846,FBXL12,UBL5,PIN1 NA NA NA NA ZNF846 15808 407 chr2 10169033 10170884 10169635 N NA KLF11 TAF1B,GRHL1,RRM2,KLF11 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 KLF11 12798 408 chr2 10424505 10427139 10425640 N NA HPCAL1 RRM2,NOL10,HPCAL1,C2orf48,MIR4261 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HPCAL1 15901 409 chr2 105273808 105276839 105275143 Y NA NA LOC100506421 IMR90 Hi-C 24141950 MRPS9 377644 410 chr2 106886182 106887415 106886609 N NA NA UXS1 IMR90 Hi-C 24141950 UXS1 75387 411 chr2 109646957 109649650 109648112 N NA NA MALL,EDAR IMR90 Hi-C 24141950 CCDC138 243738 412 chr2 112462025 112465031 112463783 Y NA NA BCL2L11,ACOXL IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MERTK 191160 413 chr2 113914536 113916176 113915006 N NA PSD4 IL1RN,LOC654433,PAX8,PSD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSD4 15384 414 chr2 114450361 114451007 114450428 N NA NA NA NA NA NA SLC35F5 63393 415 chr2 128143663 128146859 128145242 N NA MAP3K2 CYP27C1,IWS1 IMR90 Hi-C 24141950 MAP3K2 42858 416 chr2 129079290 129081345 129079746 N NA HS6ST1 HS6ST1,UGGT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 HS6ST1 3119 417 chr2 131554656 131556085 131555465 N NA NA PLEKHB2,FAM168B K562,MCF7 ChIA-PET 22265404 FAM168B 294919 418 chr2 132439510 132440824 132439983 N NA NA NA NA NA NA LOC150776 189124 419 chr2 134876553 134881733 134878065 N NA NA NA NA NA NA MGAT5 130097 420 chr2 136765166 136767626 136765916 Y UBXN4,CXCR4,CXCR4 DARS NA NA NA NA DARS 21944 421 chr2 145417746 145419894 145418626 Y GTDC1,ZEB2 NA ZEB2 K562 ChIA-PET 22265404 ZEB2 139788 422 chr2 146508361 146511037 146509635 Y NA NA DKFZp686O1327,ZEB2 IMR90 Hi-C 24141950 ZEB2 1230403 423 chr2 149302411 149304230 149303475 N NA NA ORC4,KIF5C IMR90 Hi-C 24141950 EPC2 98330 424 chr2 157194356 157200416 157198691 N NA NR4A2 GPD2,GALNT5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NR4A2 5069 425 chr2 157256640 157258232 157257437 N NA GPD2 NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 GPD2 33733 426 chr2 158753669 158755183 158753985 N NA ACVR1 ACVR1,PKP4 IMR90 Hi-C 24141950 ACVR1 21295 427 chr2 168148346 168150193 168149234 N NA NA NA NA NA NA CERS6 1162566 428 chr2 182215059 182218187 182217115 N NA NA NA NA NA NA ITGA4 103432 429 chr2 182669594 182670985 182670586 N NA NA PPP1R1C,SSFA2 IMR90 Hi-C 24141950 SSFA2 85487 430 chr2 182675250 182676260 182675886 N NA NA SSFA2 IMR90 Hi-C 24141950 SSFA2 80212 431 chr2 191490782 191493683 191492815 Y INPP1,STAT1,NAB1 NAB1 INPP1,MFSD6,TMEM194B IMR90 Hi-C 24141950 NAB1 20165 432 chr2 196334552 196336513 196335598 N NA NA SLC39A10 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC39A10 185019 433 chr2 196337179 196339418 196338813 N NA NA SLC39A10 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC39A10 182114 434 chr2 196350434 196353538 196352032 Y NA NA DNAH7,SLC39A10 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC39A10 167994 435 chr2 208497303 208499146 208498012 N NA METTL21A CCNYL1,METTL21A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 METTL21A 7330 436 chr2 214097320 214099424 214098044 Y IKZF2,IKZF2 NA ABCA12 IMR90 Hi-C 24141950 IKZF2 80987 437 chr2 224329126 224331359 224330602 Y WDFY1 NA SCG2,AP1S3 IMR90 Hi-C 24141950 WDFY1 478693 438 chr2 226894675 226897841 226895788 Y NA NA IRS1 IMR90 Hi-C 24141950 RHBDD1 802830 439 chr2 232247624 232249799 232248166 N NA B3GNT7 NA NA NA NA B3GNT7 10536 440 chr2 232252089 232254864 232253229 N NA B3GNT7 B3GNT7 K562 ChIA-PET 22265404 B3GNT7 5471 441 chr2 232255732 232258021 232256723 N NA B3GNT7 B3GNT7 K562 ChIA-PET 22265404 B3GNT7 2314 442 chr2 232346804 232349270 232348228 N NA NCL NA NA NA NA NCL 17599 443 chr2 232505216 232509222 232507536 Y NA NA PDE6D IMR90 Hi-C 24141950 PTMA 64013 444 chr2 232525355 232532568 232527136,232531250 Y,Y DIS3L2;NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 40667 445 chr2 232544520 232548505 232546848 Y NA PTMA PTMA,PDE6D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTMA 24730 446 chr2 24712432 24721673 24713964,24716727 N,N NA;NA NA CENPO,NCOA1,ADCY3,EFR3B IMR90 Hi-C 24141950 NCOA1 85673 447 chr2 27978698 27981163 27979842 N NA MRPL33 FOSL2,RBKS,BRE,MRPL33 MCF7 ChIA-PET 22265404 MRPL33 13421 448 chr2 28588529 28591166 28589654 N NA FOSL2 BRE,RBKS,FOSL2,GPN1,CCDC121,SLC4A1AP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSL2 24613 449 chr2 37550601 37553081 37552010 N NA PRKD3 QPCT,FAM82A1,PRKD3,EIF2AK2,C2orf56 IMR90 Hi-C 24141950 PRKD3 6379 450 chr2 43033684 43038945 43038049 N NA OXER1 THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 OXER1 42283 451 chr2 43132574 43134442 43133395 N NA NA ZFP36L2,LOC100129726,THADA IMR90 Hi-C 24141950 OXER1 141173 452 chr2 43153518 43162707 43154838,43161097 N,N NA;NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 OXER1 162117 453 chr2 43183979 43197623 43186808,43186634,43189065,43191855,43195231 Y,Y,N,N,Y NA;NA;NA;NA;NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OXER1 192578 454 chr2 43284850 43287708 43286722 N NA NA ZFP36L2,LOC100129726,THADA IMR90 Hi-C 24141950 ZFP36L2 166037 455 chr2 43384693 43387364 43386127 Y OXER1,ZFP36L2 NA THADA,LOC100129726,ZFP36L2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 66381 456 chr2 43394387 43399037 43396126 N NA NA LOC100129726,ZFP36L2,THADA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 54708 457 chr2 43400447 43402624 43401755 Y OXER1,THADA,THADA,ZFP36L2 NA LOC100129726,ZFP36L2,THADA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 51121 458 chr2 43405041 43407836 43406321 Y OXER1 ZFP36L2,LOC100129726 ZFP36L2,THADA,LOC100129726 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZFP36L2 45909 459 chr2 43420066 43423066 43422030 Y THADA,THADA,ZFP36L2 ZFP36L2,LOC100129726 ZFP36L2,LOC100129726,THADA K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ZFP36L2 30679 460 chr2 47536781 47538481 47537959 N NA NA CALM2,TTC7A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MSH2 91782 461 chr2 48337782 48340334 48338549 N NA NA FOXN2,FBXO11,PPP1R21,STON1-GTF2A1L,MSH6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOXN2 201461 462 chr2 55338009 55342191 55339554 N NA NA C2orf63,RTN4,EML6 IMR90 Hi-C 24141950 RTN4 60275 463 chr2 55346729 55349439 55347910 Y CCDC88A NA RTN4,EML6,C2orf63 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RTN4 68995 464 chr2 55360372 55362317 55360984 Y SMEK2,CCDC88A,RTN4 NA RTN4,C2orf63,EML6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RTN4 82638 465 chr2 58654413 58656227 58655306 N NA NA FANCL IMR90 Hi-C 24141950 FANCL 185898 466 chr2 59821505 59822762 59822032 N NA NA NA NA NA NA BCL11A 957871 467 chr2 61989928 61992639 61991559 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCT4 123167 468 chr2 62530538 62533520 62531550 N NA NA COMMD1 IMR90 Hi-C 24141950 B3GNT2 107276 469 chr2 64455080 64456073 64455513 N NA NA PELI1 IMR90 Hi-C 24141950 PELI1 83475 470 chr2 64978252 64980044 64978980 N NA NA SERTAD2,LOC339807,AFTPH IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 97206 471 chr2 64993778 64996487 64995361 Y SERTAD2 NA SERTAD2,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 112732 472 chr2 65085887 65088186 65087071 Y AFTPH,SERTAD2,RAB1A,ACTR2 NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 SLC1A4 127393 473 chr2 65171925 65174764 65173491 Y AFTPH,SERTAD2 SLC1A4 SERTAD2,AFTPH,LOC339807,LOC400958,SLC1A4,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC1A4 40815 474 chr2 65662075 65665325 65663345 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 2419 475 chr2 68952699 68955405 68953981 N NA ARHGAP25 GKN2,ANTXR1,ARHGAP25,FBXO48,APLF IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ARHGAP25 6508 476 chr2 71502789 71504711 71503812 N NA NA NA NA NA NA ZNF638 54174 477 chr2 74258597 74260415 74259570 N NA TET3 DGUOK,STAMBP,ACTG2,TET3,BOLA3,BOLA3-AS1 IMR90 Hi-C 24141950 TET3 13035 478 chr2 74942156 74943575 74942628 N NA NA HK2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 HK2 116207 479 chr2 85125095 85126095 85125692 N NA NA DNAH6,TMSB10,C2orf89,KCMF1 IMR90 Hi-C 24141950 KCMF1 72136 480 chr2 85644226 85649408 85645690,85648539 N,N NA;NA CAPG ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 CAPG 3029 481 chr2 86226327 86227085 86226398 Y NA LOC90784 NA NA NA NA LOC90784 23906 482 chr2 8674569 8677040 8675722 N NA NA LOC100506274,LINC00299,ID2,LOC339788 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 145073 483 chr2 8682444 8684952 8683861 N NA NA LOC100506274,ID2,LOC339788,LINC00299 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 137161 484 chr2 8817809 8819865 8819070 N NA ID2 NA NA NA NA ID2 2248 485 chr2 96656659 96658482 96657289 N NA NA NA NA NA NA ASTL 145693 486 chr2 96822788 96824917 96823791 Y TMEM127,KIAA1310,ARID5A,ASTL,DUSP2 ASTL,DUSP2,LOC285033,STARD7 ASTL,DUSP2,STARD7,LOC285033,ADRA2B,SNRNP200,TMEM127,CIAO1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DUSP2 11609 487 chr2 97192030 97195006 97193453 N NA ARID5A ITPRIPL1,LOC285033,NCAPH,SNRNP200,NEURL3,KANSL3,CNNM4,FER1L5 IMR90 Hi-C 24141950 ARID5A 7458 488 chr20 1781893 1785636 1784357 N NA NA SIRPA,LOC100289473,PDYN,STK35 IMR90 Hi-C 24141950 SIRPA 89177 489 chr20 19737327 19741432 19738915 N NA NA SLC24A3,RIN2,C20orf26,CRNKL1,LOC100130264 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAA20 256502 490 chr20 20713146 20716877 20714948 N NA RALGAPA2 NA NA NA NA RALGAPA2 19880 491 chr20 20723289 20726797 20724655 N NA RALGAPA2 RALGAPA2,C20orf26 IMR90 Hi-C 24141950 RALGAPA2 30023 492 chr20 2504895 2506615 2505601 N NA ZNF343 TMC2 IMR90 Hi-C 24141950 ZNF343 15117 493 chr20 29522812 29525592 29524527 N NA NA NA NA NA NA FRG1B 86287 494 chr20 31259869 31261840 31261334 N NA NA C20orf112,COMMD7,DNMT3B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 COMMD7 69974 495 chr20 31266889 31270031 31269224 Y C20orf185,C20orf203 NA C20orf112,DNMT3B IMR90 Hi-C 24141950 COMMD7 61783 496 chr20 3410574 3412162 3411376 N NA C20orf194,ATRN ATRN,C20orf194 IMR90 Hi-C 24141950 C20orf194 22265 497 chr20 34355842 34357695 34356244 Y SPAG4,CPNE1,RBM39,SCAND1,PHF20 RBM39,PHF20 NA NA NA NA PHF20 2228 498 chr20 34651454 34654359 34653041 Y NA LOC647979 LOC647979,PHF20,SCAND1,C20orf152,EPB41L1 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC647979 12572 499 chr20 39619653 39620898 39620278 Y MAFB,TOP1 TOP1 TOP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 36564 500 chr20 39944772 39947577 39946156 N NA ZHX3 ZHX3,IQGAP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 ZHX3 16033 501 chr20 4018061 4020220 4018782 Y PANK2,PANK2,PANK2,RNF24,RNF24 RNF24 RNF24,CENPB,PANK2 IMR90 Hi-C 24141950 RNF24 21845 502 chr20 40320902 40323768 40321978 N NA NA CHD6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD6 73769 503 chr20 4043601 4048199 4045906 N NA RNF24 RNF24,PANK2,MAVS IMR90 Hi-C 24141950 RNF24 47385 504 chr20 4054268 4056450 4055844 N NA NA RNF24,PANK2,MAVS IMR90 Hi-C 24141950 RNF24 58052 505 chr20 4062081 4067588 4063524,4066520 N,N NA;NA NA RNF24,PANK2,MAVS,MIR103B2,LOC728228,CDC25B,C20orf29,SMOX,ADRA1D IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SMOX 61862 506 chr20 46019658 46021920 46020973 N NA ZMYND8 ZMYND8,LOC100131496,SLC2A10,EYA2,NCOA3,PARD6B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYND8 34184 507 chr20 47939665 47941231 47940423 N NA ZNFX1-AS1,ZNFX1 ZNFX1,ZNFX1-AS1,KCNB1,SLC9A8,DDX27,B4GALT5,PTGIS MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNFX1 44909 508 chr20 4809470 4812014 4810313 Y SLC23A2,CDS2,RASSF2,RASSF2 RASSF2 NA NA NA NA RASSF2 5179 509 chr20 48379201 48383518 48381806 Y ZNFX1,B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8 B4GALT5,SLC9A8 B4GALT5,SLC9A8,KCNB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 45732 510 chr20 48405338 48407796 48406672 Y B4GALT5,TMEM189,SNAI1,CEBPB,SLC9A8 SLC9A8 KCNB1,B4GALT5,SLC9A8,SPATA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC9A8 21454 511 chr20 49099495 49100995 49100495 Y TMEM189,CEBPB,PTPN1 PTPN1 LOC284751,TMEM189-UBE2V1,MIR645,FAM65C,PTPN1,PARD6B,UBE2V1,SNAI1,CEBPB IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 25896 512 chr20 52205275 52212675 52209997 N NA ZNF217 SUMO1P1,BCAS1,ZNF217,CSRNP3,BMP7,SULF2,ZMYND8,CYP24A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323,22265404 ZNF217 5639 513 chr20 52225431 52226864 52226114 N NA ZNF217 ZNF217,BCAS1 IMR90 Hi-C 24141950 ZNF217 25795 514 chr20 52294114 52296468 52294759 Y NA NA BCAS1,SUMO1P1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 94478 515 chr20 52366681 52368794 52367946 Y ZNF217 NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF217 167045 516 chr20 52445761 52447106 52447012 N NA NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 246125 517 chr20 52531269 52534514 52532474 Y ZNF217 NA SUMO1P1,BMP7,ZNF217 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PFDN4 289988 518 chr20 61198904 61204719 61200961,61203441 Y,N NA;NA NA RPS21,C20orf151,CABLES2,C20orf166,C20orf166-AS1,NTSR1,COL9A3,OGFR,C20orf20 IMR90 Hi-C 24141950 C20orf166-AS1 50136 519 chr20 61267398 61269092 61267990 Y NA SLCO4A1 NA NA NA NA SLCO4A1 4705 520 chr20 62459039 62471451 62463224 N NA ZBTB46,TPD52L2 PTK6,SLC2A4RG,ZBTB46,TPD52L2,DNAJC5,ABHD16B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZBTB46 22183 521 chr21 30448270 30450392 30449497 N NA CCT8 NA NA NA NA CCT8 2260 522 chr21 34430044 34433263 34432271 Y SON,IL10RB,IFNGR2,IFNAR1,GART,GART,SYNJ1,SYNJ1,IFNAR2,OLIG1 OLIG2,OLIG1 OLIG1 IMR90 Hi-C 24141950 OLIG1 9187 523 chr21 34754626 34756099 34755737 Y IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2 IFNGR2 IFNGR2 MCF7 ChIA-PET 22265404 IFNGR2 19103 524 chr21 35365629 35367349 35366382 Y NA NA LOC100506334,MRPS6,LINC00310 IMR90 Hi-C 24141950 ATP5O 77471 525 chr21 38932660 38937669 38936328 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 192801 526 chr21 40355680 40359806 40357030 Y ETS2 NA ETS2,WRB,LINC00114 IMR90,HELA Hi-C,5C 24141950,22955621 ETS2 178449 527 chr21 40361166 40363153 40361962 Y NA NA ETS2,WRB,LINC00114 IMR90,HELA Hi-C,5C 24141950,22955621 ETS2 183935 528 chr21 40375800 40378518 40377010 Y NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 176922 529 chr21 40476427 40479115 40477420 Y ETS2 NA ETS2,LINC00114,ERG IMR90 Hi-C 24141950 PSMG1 76325 530 chr21 40741294 40743987 40742596 Y NA HMGN1,WRB BRWD1,BRWD1-IT2,WRB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 WRB 8226 531 chr21 46969380 46972390 46970516 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 6995 532 chr21 46974904 46977888 46975705 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3,COL18A1,LINC00315,LOC642852 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 12519 533 chr22 19563937 19567436 19564675,19566809 N,N NA;NA NA HIRA,CLDN5,LOC150185,CLTCL1,UFD1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC45 96523 534 chr22 25814553 25818241 25815526,25817869 N,N NA;NA LRP5L,CRYBB2P1 MYO18B,CRYBB2P1,LRP5L,SEZ6L,KIAA1671 IMR90 Hi-C 24141950 CRYBB2P1 25813 535 chr22 29205773 29220091 29207460,29210646 N,N NA;NA CCDC117,XBP1 XBP1,CHEK2,HSCB,C22orf31,ZNRF3,KREMEN1,TTC28,TTC28-AS1,EMID1,CCDC117 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 XBP1 9213 536 chr22 37928889 37931435 37930138 N NA MFNG,CARD10,CDC42EP1 CYTH4,MFNG,CARD10,GGA1,CDC42EP1,LGALS2,PDXP,SH3BP1,TRIOBP,H1F0,GCAT,ELFN2 IMR90 Hi-C 24141950 CARD10 13679 537 chr22 41105572 41106518 41106037 N NA NA MKL1,MCHR1,SLC25A17,ST13,XPNPEP3,DNAJB7 IMR90 Hi-C 24141950 MKL1 72882 538 chr22 41410120 41419765 41418313 Y MKL1,EP300 NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBX1 62769 539 chr22 41464338 41465528 41465235 N NA EP300 RBX1,EP300,XPNPEP3,MIR1281,RANGAP1,CHADL,L3MBTL2 IMR90 Hi-C 24141950 EP300 23086 540 chr22 42839634 42841404 42840419 N NA NA MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3,FAM109B,NAGA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RRP7A 74425 541 chr22 46393127 46394119 46393932 N NA LOC100271722 C22orf40,PKDREJ,ATXN10,GTSE1,CN5H6.4,TRMU,C22orf26,LOC150381 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100271722 46629 542 chr22 46987451 47001940 46989427,46995136,46998153,46999970 Y,Y,N,N TBC1D22A,CERK,GRAMD4;TBC1D22A,CERK;NA;NA GRAMD4 GRAMD4,CELSR1 IMR90 Hi-C 24141950 GRAMD4 20718 543 chr22 47007580 47010894 47008982 N NA GRAMD4 NA NA NA NA GRAMD4 11764 544 chr22 50232181 50232880 50232594 Y TUBGCP6,BRD1,ZBED4,CRELD2 BRD1,ZBED4 ZBED4 K562 ChIA-PET 22265404 BRD1 13729 545 chr22 50240850 50245290 50242059 N NA BRD1,ZBED4 ZBED4,BRD1 MCF7 ChIA-PET 22265404 ZBED4 2207 546 chr3 107148095 107151041 107150367 N NA NA LOC344595,BBX,LOC100302640 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BBX 90742 547 chr3 107842973 107845603 107843974 N NA CD47 CD47,IFT57,MYH15 IMR90 Hi-C 24141950 CD47 33038 548 chr3 111392944 111394591 111393362 N NA NA CD96,PHLDB2 IMR90 Hi-C 24141950 CD96 132018 549 chr3 127862522 127865038 127864383 N NA RUVBL1,EEFSEC EEFSEC,LOC90246,RUVBL1,SEC61A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 EEFSEC 7275 550 chr3 128397072 128404621 128399656 N NA RPN1,RAB7A RAB7A,RPN1,LOC653712,ACAD9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RPN1 27353 551 chr3 128947198 128949936 128949439 N NA CNBP,COPG1,C3orf37 KIAA1257,CCDC48,ISY1-RAB43,CNBP,COPG1,GP9,C3orf37 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 COPG1 18517 552 chr3 129663457 129675321 129669759,129673583 N,N NA;NA TRH TMCC1,TRH,ALG1L2,FAM86HP,LOC100507032,IFT122 IMR90 Hi-C 24141950 TRH 17793 553 chr3 13320126 13323958 13323319 N NA NA NUP210,LOC285375 IMR90 Hi-C 24141950 NUP210 137851 554 chr3 13492825 13494667 13493411 Y NA NUP210,HDAC11 IQSEC1,NUP210 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HDAC11 27048 555 chr3 138504383 138505379 138504985 N NA PIK3CB PIK3CB IMR90 Hi-C 24141950 PIK3CB 26182 556 chr3 138551693 138555405 138553818 N NA NA PIK3CB IMR90 Hi-C 24141950 PIK3CB 73492 557 chr3 138593779 138595907 138594858 Y NA NA NA NA NA NA PIK3CB 115578 558 chr3 138633413 138636047 138634717 N NA NA ESYT3,PIK3CB,MRPS22,MRAS,CEP70,FAIM IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PIK3CB 155212 559 chr3 139019660 139022897 139020759 N NA MRPS22 BPESC1,FOXL2,MRPS22,COPB2,C3orf72 IMR90 Hi-C 24141950 MRPS22 39964 560 chr3 151917895 151919712 151918751 N NA NA MBNL1 IMR90 Hi-C 24141950 MBNL1 66117 561 chr3 151920570 151923341 151922313 Y AADACL2 NA MBNL1,LOC401093 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MBNL1 62488 562 chr3 152939110 152941214 152939785 N NA NA RAP2B IMR90 Hi-C 24141950 RAP2B 59081 563 chr3 155052255 155053907 155052873 N NA NA NA NA NA NA SLC33A1 518341 564 chr3 156360394 156362525 156361371 N NA TIPARP,TIPARP-AS1 LOC339894,TIPARP,TIPARP-AS1,LEKR1,LOC100498859 IMR90 Hi-C 24141950 TIPARP 29680 565 chr3 156888328 156890178 156889006 N NA CCNL1 VEPH1,CCNL1,PTX3 IMR90 Hi-C 24141950 CCNL1 9846 566 chr3 156891373 156895073 156892857 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 12891 567 chr3 158465588 158467083 158466371 Y MFSD1 NA NA NA NA NA MFSD1 52632 568 chr3 159743314 159747301 159745746 N NA IL12A IQCJ-SCHIP1,IFT80,SMC4,C3orf80 IMR90 Hi-C 24141950 IL12A 36691 569 chr3 159755942 159757884 159756890 N NA IL12A IQCJ-SCHIP1,IFT80,C3orf80 IMR90 Hi-C 24141950 IL12A 49319 570 chr3 159897340 159899822 159898458 N NA C3orf80 C3orf80 IMR90 Hi-C 24141950 C3orf80 43601 571 chr3 165876789 165878874 165877576 N NA NA NA NA NA NA PDCD10 1573777 572 chr3 166878797 166881175 166880154 N NA NA NA NA NA NA PDCD10 571476 573 chr3 171691635 171695641 171693373 Y FNDC3B NA PLD1,FNDC3B,TMEM212 IMR90 Hi-C 24141950 FNDC3B 61777 574 chr3 171696844 171699846 171698477 Y NA NA TMEM212,PLD1,FNDC3B IMR90 Hi-C 24141950 FNDC3B 57572 575 chr3 171701956 171704588 171702845 N NA NA PLD1,FNDC3B,TMEM212 IMR90 Hi-C 24141950 FNDC3B 52830 576 chr3 172467327 172469752 172468831 N NA NCEH1,ECT2 NCEH1,ECT2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ECT2 2546 577 chr3 174157705 174159694 174158930 N NA NA NAALADL2 IMR90 Hi-C 24141950 ECT2 1685407 578 chr3 184242031 184244294 184243242 N NA NA CHRD,PSMD2,ECE2,EIF4G1,CLCN2,POLR2H,FAM131A,THPO,EPHB3,VPS8 IMR90 Hi-C 24141950 POLR2H 160837 579 chr3 185278766 185280174 185279646 N NA SENP2 LIPH,TMEM41A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SENP2 23857 580 chr3 186543513 186545984 186545296 N NA EIF4A2,RFC4 FETUB,EIF4A2,RFC4,ST6GAL1,DNAJB11,TBCCD1,ADIPOQ IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 RFC4 19029 581 chr3 195822385 195823921 195823373 N NA TFRC LOC401109,TFRC,PCYT1A,LRRC33 IMR90 Hi-C 24141950 TFRC 13353 582 chr3 195846258 195848727 195847643 N NA TFRC TFRC,LRRC33,LOC401109,C3orf43,MIR570,MUC20,SDHAP2,PCYT1A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TFRC 37226 583 chr3 196255055 196256985 196255815 Y NA RNF168,WDR53,FBXO45 UBXN7,MUC20,RNF168,C3orf43,PCYT1A,TM4SF19-TCTEX1D2,WDR53,FBXO45,CEP19 IMR90 Hi-C 24141950 RNF168 24416 584 chr3 196338163 196340227 196339034 Y LRRC33 WDR53,FBXO45,LRRC33 PCYT1A,TCTEX1D2,FBXO45,WDR53,CEP19,PIGX,LRRC33,PAK2,MFI2,MFI2-AS1,SENP5 IMR90 Hi-C 24141950 LRRC33 26429 585 chr3 196350105 196352886 196351507 Y LRRC33 LRRC33 WDR53,FBXO45,SENP5,UBXN7,LRRC33,C3orf43,PAK2 IMR90 Hi-C 24141950 LRRC33 13770 586 chr3 196359758 196364187 196361026 N NA LRRC33 FBXO45,SENP5,PAK2,LRRC33,CEP19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC33 2469 587 chr3 22411159 22416139 22413398 N NA NA NA NA NA NA ZNF385D 618343 588 chr3 22596727 22598868 22597699 N NA NA NA NA NA NA UBE2E2 645916 589 chr3 27524370 27527210 27526023 N NA SLC4A7 NEK10,SLC4A7 IMR90 Hi-C 24141950 SLC4A7 26125 590 chr3 42053284 42063432 42054786,42056743 N,N NA;NA NA TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 69314 591 chr3 44550400 44554255 44552174 N NA ZNF445 ZNF445 K562 ChIA-PET 22265404 ZNF445 31238 592 chr3 4514702 4517602 4516685 Y NA SUMF1,ITPR1 SUMF1 MCF7,K562 ChIA-PET 22265404 SUMF1 5736 593 chr3 46138370 46141212 46140097 Y CCR5,CCRL2,CCRL2,CCR1 NA CXCR6,FYCO1,CCR5,SACM1L,SLC6A20,CCR1,CCR3,CCRL2 IMR90 Hi-C 24141950 FYCO1 101054 594 chr3 48376440 48378197 48376991 N NA NME6 NA NA NA NA NME6 33592 595 chr3 52219050 52220758 52220047 Y ALAS1,ALAS1 POC1A,ALAS1,TLR9 RPL29,DUSP7,POC1A,ALAS1,WDR82,PPM1M,DNAH1,BAP1 IMR90 Hi-C 24141950 ALAS1 11341 596 chr3 69589970 69592292 69591555 N NA NA NA NA NA NA FRMD4B 154540 597 chr3 72358508 72361343 72359826 Y RYBP NA SHQ1,RYBP IMR90 Hi-C 24141950 RYBP 134431 598 chr3 73159593 73161158 73159853 Y EBLN2 NA PDZRN3,CACNA1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 113474 599 chr3 76247216 76249925 76248791 N NA NA NA NA NA NA ZNF717 412961 600 chr3 87137683 87139205 87138620 N NA NA NA NA NA NA CHMP2B 137208 601 chr3 87840486 87844066 87841901 N NA NA NA NA NA NA HTR1F 187660 602 chr4 105982251 105983283 105982975 N NA NA TET2 MCF7 ChIA-PET 22265404 TET2 84559 603 chr4 116192805 116195319 116193562 N NA NA NA NA NA NA C4orf21 2634654 604 chr4 116242680 116245985 116244054 N NA NA NA NA NA NA C4orf21 2684529 605 chr4 119511517 119514040 119512804 N NA NA NA NA NA NA METTL14 92534 606 chr4 123071540 123075159 123073888 N NA NA KIAA1109 K562 ChIA-PET 22265404 BBS7 279888 607 chr4 124364465 124365698 124365160 N NA SPRY1 SPATA5 IMR90 Hi-C 24141950 SPRY1 46509 608 chr4 140095566 140100631 140097848,140099039 N,N NA;NA ELF2 ELF2,NAA15,C4orf49 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ELF2 34960 609 chr4 140345357 140348994 140348215 N NA RAB33B ELF2,NAA15,SETD7,RAB33B IMR90 Hi-C 24141950 RAB33B 25967 610 chr4 15755117 15759170 15758163 Y FBXL5,TAPT1,CD38 CD38 C1QTNF7,CD38,FGFBP2,PROM1,CC2D2A IMR90 Hi-C 24141950 CD38 20761 611 chr4 1580100 1582575 1581807 N NA NA RNF212,TMED11P,KIAA1530,FAM53A,SLBP,CTBP1,C4orf42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLBP 131455 612 chr4 160022959 160028410 160024675 N NA NA C4orf45,FNIP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAPGEF2 160588 613 chr4 171340907 171343176 171341622 N NA NA NA NA NA NA C4orf27 661814 614 chr4 171418089 171419527 171418544 N NA NA NA NA NA NA C4orf27 738996 615 chr4 184319179 184320753 184319758 N NA CDKN2AIP WWC2,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 45036 616 chr4 185433112 185436261 185435752 N NA IRF2 LOC728175,IRF2,CCDC111,CASP3 IMR90 Hi-C 24141950 IRF2 37386 617 chr4 185456663 185460081 185458343 N NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 60937 618 chr4 26288863 26291066 26290087 Y RBPJ,RBPJ RBPJ RBPJ IMR90 Hi-C 24141950 RBPJ 30266 619 chr4 3287504 3300244 3294174 Y NA C4orf44,RGS12 RGS12,HTT,HGFAC IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RGS12 15630 620 chr4 38319634 38321398 38320614 Y NA NA FLJ13197,KLF3,TBC1D1,TLR10 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF3 344392 621 chr4 38530514 38531865 38531198 N NA NA FLJ13197,KLF3 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF3 133925 622 chr4 55645457 55651662 55650666 Y NA NA KIT IMR90 Hi-C 24141950 KIT 121362 623 chr4 55684579 55686446 55685471 N NA NA NA NA NA NA KIT 160484 624 chr4 74569825 74571147 74570452 Y ANKRD17,MTHFD2L,IL8,CXCL3,CXCL2 IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 35076 625 chr4 78114326 78115885 78115029 N NA CCNG2 CCNI,CCNG2,SHROOM3 IMR90 Hi-C 24141950 CCNG2 35969 626 chr4 78774072 78774779 78774486 Y CNOT6L CNOT6L,MRPL1 MRPL1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL1 9026 627 chr4 81045763 81050312 81048897,81046936 N,N NA;NA NA PAQR3,ANTXR2,PRDM8,FGF5 IMR90 Hi-C 24141950 ANTXR2 51286 628 chr4 9153774 9155675 9154911 Y NA NA NA NA NA NA METTL19 711242 629 chr5 101118369 101120302 101119667 N NA NA NA NA NA NA ST8SIA4 879382 630 chr5 102089493 102092712 102091288 N NA NA NA NA NA NA PAM 108815 631 chr5 117096396 117098500 117097151 N NA NA NA NA NA NA DMXL1 1308584 632 chr5 117223911 117226199 117224680 N NA NA NA NA NA NA DMXL1 1180885 633 chr5 124083344 124085334 124083924 N NA NA ZNF608 IMR90 Hi-C 24141950 CSNK1G3 1235551 634 chr5 126082725 126086008 126083929 N NA LMNB1 MEGF10,LMNB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LMNB1 26307 635 chr5 126092488 126095706 126094343 Y LMNB1,LMNB1 LMNB1 LMNB1 K562,MCF7 ChIA-PET 22265404 LMNB1 16609 636 chr5 126564791 126566002 126565272 N NA NA LMNB1 IMR90 Hi-C 24141950 MARCH3 198351 637 chr5 133801176 133803497 133802123 N NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 53578 638 chr5 135760331 135762818 135761756 N NA NA NA NA NA NA SMAD5 291795 639 chr5 138897171 138898383 138897661 Y MATR3,MATR3,DNAJC18,PSD2 TMEM173,UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 34828 640 chr5 139087407 139094049 139090698 Y MATR3,MATR3,CXXC5 NA CXXC5,UBE2D2 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CXXC5 59106 641 chr5 139486433 139489302 139487295 N NA PURA,IGIP NRG2,CYSTM1,IGIP IMR90 Hi-C 24141950 PURA 4406 642 chr5 148184341 148187275 148185258 N NA ADRB2 SH3TC2,ABLIM3 IMR90 Hi-C 24141950 ADRB2 18881 643 chr5 149864309 149872918 149866218 N NA RPS14,NDST1 NDST1,RBM22,MYOZ3,SYNPO,RPS14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDST1 14756 644 chr5 150140891 150145756 150143251 Y CD74,CD74,TNIP1,CCDC69,RBM22,DCTN4,DCTN4,C5orf62 DCTN4,C5orf62 DCTN4,C5orf62,RBM22 MCF7,K562 ChIA-PET 22265404 DCTN4 2234 645 chr5 154061215 154063727 154062414 N NA NA LARP1,C5orf4 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CNOT8 174471 646 chr5 164612006 164613785 164612899 N NA NA NA NA NA NA MAT2B 1681775 647 chr5 164614921 164617527 164615825 Y NA NA NA NA NA NA MAT2B 1684690 648 chr5 171027595 171029104 171028300 N NA NA FBXW11 IMR90 Hi-C 24141950 FGF18 180928 649 chr5 171267001 171268156 171267624 N NA NA NA NA NA NA FBXW11 165721 650 chr5 17436462 17437370 17436781 N NA NA LOC401177 IMR90 Hi-C 24141950 ZNF622 970568 651 chr5 178934813 178936019 178935275 N NA RUFY1 ADAMTS2 IMR90 Hi-C 24141950 RUFY1 41543 652 chr5 178956397 178958672 178957801 N NA RUFY1 RUFY1 MCF7 ChIA-PET 22265404 RUFY1 18890 653 chr5 178961022 178962470 178961458 N NA RUFY1 RUFY1,ADAMTS2 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 RUFY1 15092 654 chr5 18741353 18745986 18745221 Y NA NA NA NA NA NA ZNF622 2275459 655 chr5 32192394 32195077 32193885 N NA GOLPH3 MTMR12,GOLPH3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GOLPH3 17969 656 chr5 34244197 34245554 34244740 N NA NA NA NA NA NA C1QTNF3-AMACR 119564 657 chr5 36723829 36726264 36724938 N NA NA NIPBL,LOC646719 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC646719 150532 658 chr5 36744469 36746195 36745356 N NA NA LOC646719,NIPBL MCF7 ChIA-PET 22265404 LOC646719 130601 659 chr5 40406034 40408207 40407088 Y PTGER4,CARD6 NA PTGER4 IMR90 Hi-C 24141950 PTGER4 271825 660 chr5 42948767 42957631 42950838 N NA NA LOC648987,LOC153684 IMR90 Hi-C 24141950 LOC648987 61282 661 chr5 49740284 49742334 49741390 N NA EMB NA NA NA NA EMB 3050 662 chr5 49948242 49951311 49949901 N NA PARP8 NA NA NA NA PARP8 10422 663 chr5 55710300 55712323 55711364 Y MAP3K1 NA MAP3K1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP3K1 398577 664 chr5 55903334 55905107 55904137 Y NA NA MAP3K1,IL6ST IMR90 Hi-C 24141950 MAP3K1 205793 665 chr5 56031232 56033548 56032550 N NA NA MAP3K1 MCF7 ChIA-PET 22265404 MAP3K1 77352 666 chr5 56058523 56060760 56059935 N NA NA MAP3K1 MCF7,IMR90,HELA ChIA-PET,Hi-C,5C 22265404,24141950,22955621 MAP3K1 50140 667 chr5 57839269 57842662 57840254 Y GAPT NA NA NA NA NA GAPT 51939 668 chr5 68338276 68339301 68338955 N NA NA NA NA NA NA SLC30A5 50475 669 chr5 71813196 71815044 71813966 Y NA NA ZNF366,TNPO1,PTCD2 IMR90 Hi-C 24141950 PTCD2 196996 670 chr5 81146267 81149363 81147803 Y NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP2 99195 671 chr5 90575274 90577386 90576421 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 98778 672 chr5 95170098 95174726 95170712 N NA GLRX RHOBTB3,GLRX,ARSK,RFESD,SPATA9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLRX 11521 673 chr6 110806013 110808563 110806859 N NA SLC22A16 NA NA NA NA SLC22A16 8169 674 chr6 111179563 111181205 111180712 Y CDK19,SLC16A10,AMD1,AMD1 CDK19,AMD1 CDK19,AMD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMD1 14782 675 chr6 139854307 139855960 139855470 N NA NA LOC100132735,CITED2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CITED2 158522 676 chr6 139946006 139949565 139946722,139947990 N,Y NA;NA NA CITED2 K562 ChIA-PET 22265404 CITED2 250221 677 chr6 14210009 14214444 14211494 Y CD83 NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC90A 395217 678 chr6 14451987 14454876 14453384 N NA NA JARID2 IMR90 Hi-C 24141950 CCDC90A 637195 679 chr6 144536059 144538122 144537438 Y NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 STX11 64405 680 chr6 144604663 144609284 144606691 N NA UTRN UTRN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 UTRN 3589 681 chr6 14734092 14736787 14735208 Y NA NA DTNBP1,JARID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 509740 682 chr6 14897347 14899432 14898412 N NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 347095 683 chr6 14902699 14904699 14903572 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 341828 684 chr6 14910284 14912611 14911197 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 333916 685 chr6 14921311 14924617 14922723 Y JARID2 NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 321910 686 chr6 156451818 156478888 156452815,156475839 N,N NA;NA NA NA NA NA NA ARID1B 620176 687 chr6 156485175 156489714 156486691,156486863,156489320 N,N,N NA;NA;NA NA NA NA NA NA ARID1B 609350 688 chr6 156550411 156568668 156552613,156554891 N,N NA;NA NA NOX3 IMR90 Hi-C 24141950 ARID1B 530396 689 chr6 156599728 156601665 156600783 N NA NA NA NA NA NA ARID1B 497399 690 chr6 156667057 156670608 156668882 N NA NA NA NA NA NA ARID1B 428456 691 chr6 156877612 156879445 156878491 N NA NA ARID1B IMR90 Hi-C 24141950 ARID1B 219619 692 chr6 157006621 157010113 157008196 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 88951 693 chr6 158651926 158654027 158653168 N NA NA TULP4,TMEM181,DYNLT1,SYTL3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF2H5 62547 694 chr6 18501374 18502931 18501988 Y NA NA RNF144B,DEK IMR90 Hi-C 24141950 RNF144B 113793 695 chr6 20319775 20321066 20320157 N NA NA E2F3 IMR90 Hi-C 24141950 E2F3 81071 696 chr6 21586309 21590395 21588555 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 3577 697 chr6 24743193 24744203 24743898 Y TDP2,C6orf62 C6orf62,GMNN GMNN,CMAHP,C6orf62 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 C6orf62 23790 698 chr6 25003634 25007982 25007055 Y TDP2,C6orf62 NA FAM65B IMR90 Hi-C 24141950 FAM65B 92439 699 chr6 25034113 25037652 25035784 N NA NA FAM65B IMR90 Hi-C 24141950 CMAHP 100399 700 chr6 25040706 25043115 25042214 N NA NA FAM65B IMR90 Hi-C 24141950 CMAHP 94936 701 chr6 25055850 25057876 25056485 N NA NA FAM65B,GMNN IMR90 Hi-C 24141950 CMAHP 80175 702 chr6 25149491 25156994 25155661 N NA CMAHP FAM65B IMR90 Hi-C 24141950 CMAHP 11440 703 chr6 25164535 25167470 25166196 N NA CMAHP CMAHP,FAM65B,LRRC16A IMR90 Hi-C 24141950 CMAHP 26484 704 chr6 26304464 26306076 26305482 N NA NA HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 59322 705 chr6 28833862 28835505 28834427 N NA NA NA NA NA NA TRIM27 56263 706 chr6 28909095 28909656 28909455 N NA TRIM27 TRIM27,LOC401242 IMR90 Hi-C 24141950 TRIM27 17327 707 chr6 2981139 2982681 2981899 Y SERPINB1,RIPK1,SERPINB9 SERPINB6,DKFZP686I15217,NQO2 WRNIP1,MYLK4,MIR4645,MGC39372,SERPINB1,DKFZP686I15217,SERPINB6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DKFZP686I15217 5520 708 chr6 3052906 3055166 3054076 N NA RIPK1 MYLK4,WRNIP1,DKFZP686I15217,NQO2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RIPK1 21892 709 chr6 32985658 32987964 32986844 Y HLA-DRB5,HLA-DRB1,HLA-DQA1,HLA-DQB1,HLA-DQA2,HLA-DQB2,HLA-DOB,TAP2,PSMB8,PSMB8,TAP1,PSMB9,TAPBP,PHF1,HLA-DPB1,HLA-DPA1,HLA-DMB,HLA-DMA,BRD2,BRD2,BRD2,HLA-DOA BRD2 HLA-DPB1,HLA-DPA1,HLA-DPB2,COL11A2,VPS52 IMR90 Hi-C 24141950 BRD2 49221 710 chr6 34190660 34192896 34191913 Y C6orf1,HMGA1 HMGA1,C6orf1 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 HMGA1 11681 711 chr6 42747627 42759772 42751089 N NA TBCC,KIAA0240 KIAA0240,UBR2,RPL7L1,PTCRA,KLHDC3,MEA1,PPP2R5D,PRPH2,TBCC,ATP6V0CP3,C6orf226 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0240 29022 712 chr6 5025941 5027176 5026603 N NA RPP40 LYRM4,RPP40,CDYL IMR90 Hi-C 24141950 RPP40 21670 713 chr6 53222591 53225823 53224294 Y NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 8614 714 chr6 56707354 56710233 56708606 N NA NA DST IMR90 Hi-C 24141950 KIAA1586 201151 715 chr6 64344399 64350639 64345891 N NA PHF3 PHF3,EYS,PTP4A1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF3 5792 716 chr6 6711312 6715171 6713309 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 RREB1 392659 717 chr6 6717605 6719388 6718501 Y LY86,RREB1,RREB1 NA RREB1,DSP,SNRNP48 IMR90 Hi-C 24141950 RREB1 388442 718 chr6 6724485 6727048 6725604 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 380782 719 chr6 6748650 6751053 6750404 Y LY86,RREB1,RREB1 NA RREB1,SSR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RREB1 356777 720 chr6 6884797 6887904 6886190 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 219926 721 chr6 6914617 6918636 6916409 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 189194 722 chr6 7047707 7067130 7053369,7051139,7048427,7058765 N,N,N,Y NA;NA;NA;DSP RREB1 RREB1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 RREB1 40700 723 chr6 7085764 7092431 7088777 N NA RREB1 NA NA NA NA RREB1 15399 724 chr6 710242 712291 711184 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 17133 725 chr6 74097831 74099283 74098953 N NA NA MTO1 K562 ChIA-PET 22265404 MB21D1 62760 726 chr6 82475492 82477753 82476929 N NA FAM46A FAM46A MCF7 ChIA-PET 22265404 FAM46A 13064 727 chr6 82517019 82525321 82518869,82522207 N,Y NA;FAM46A NA BCKDHB,FAM46A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM46A 54591 728 chr6 82526816 82529878 82528750 N NA NA BCKDHB,FAM46A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM46A 64388 729 chr6 82650039 82651897 82651142 Y FAM46A NA BCKDHB IMR90 Hi-C 24141950 FAM46A 187611 730 chr6 87860730 87862744 87861919 N NA ZNF292 NA NA NA NA ZNF292 2525 731 chr6 89781901 89784226 89782928 N NA PNRC1 NA NA NA NA PNRC1 6203 732 chr6 89841322 89843761 89843470 N NA PM20D2 NA NA NA NA PM20D2 12008 733 chr7 100432825 100435435 100434472 Y SAP25,EPHB4 EPHB4,SLC12A9,TRIP6,SRRT AGFG2,MOSPD3,PCOLCE,FBXO24,LOC100129845,POP7,EPO,GIGYF1,EPHB4,ZAN,SRRT,SLC12A9,TRIP6,SERPINE1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EPHB4 7682 734 chr7 100893758 100896519 100895644 N NA ZNHIT1,PLOD3,CLDN15,FIS1 NA NA NA NA FIS1 5387 735 chr7 101382301 101389312 101384428,101386946 Y,N NA;NA NA CUX1,EMID2,SH2B2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CUX1 69872 736 chr7 104580025 104587834 104581617,104585916 N,Y NA;MLL5 LOC100216546 LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100216546 43778 737 chr7 114967 116368 115719 Y NA NA FAM20C IMR90 Hi-C 24141950 FAM20C 76601 738 chr7 12754319 12757917 12755435 Y VWDE,ARL4A ARL4A ARL4A K562 ChIA-PET 22265404 ARL4A 27867 739 chr7 127875367 127878357 127877233 Y IMPDH1,LRRC4 NA PAX4,FSCN3,SND1,LEP,RBM28 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MGC27345 69459 740 chr7 128089085 128092086 128090761 N NA IMPDH1,HILPDA,METTL2B CALU,HILPDA,IMPDH1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 HILPDA 3798 741 chr7 128571833 128574011 128573489 Y NA IRF5 IRF5 MCF7 ChIA-PET 22265404 IRF5 3983 742 chr7 129597858 129599647 129598620 Y NRF1,UBE2H,UBE2H UBE2H UBE2H,NRF1,AHCYL2,SMO,ZC3HC1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 UBE2H 5058 743 chr7 142246289 142247781 142247141 N NA NA EPHB6 IMR90 Hi-C 24141950 EPHB6 305011 744 chr7 142421393 142427444 142425479 N NA NA TRY6 IMR90 Hi-C 24141950 EPHB6 125348 745 chr7 142653 151842 149364 N NA FAM20C FAM20C IMR90 Hi-C 24141950 FAM20C 41127 746 chr7 148637080 148639334 148638103 Y NA NA EZH2,CUL1,ZNF786,ZNF398,ZNF425 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EZH2 55639 747 chr7 151621987 151624355 151623157 Y RHEB,PRKAG2,PRKAG2 PRKAG2 LOC100505483,PRKAG2 MCF7 ChIA-PET 22265404 PRKAG2 47671 748 chr7 1549672 1555887 1550700,1553117 N,Y NA;ZFAND2A,MAFK INTS1,MAFK MICALL2,INTS1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 INTS1 5654 749 chr7 154996223 154999586 154997745 N NA NA INSIG1,LOC202781,PAXIP1 K562 ChIA-PET 22265404 INSIG1 89900 750 chr7 157092885 157097417 157095005 N NA DNAJB6 UBE3C,DNAJB6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 32294 751 chr7 157109903 157115043 157111192,157113550 Y,N NA;NA DNAJB6 UBE3C,DNAJB6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 14668 752 chr7 17083573 17085777 17084712 Y AHR NA AHR IMR90 Hi-C 24141950 AHR 252499 753 chr7 17272586 17274575 17273948 Y AHR NA AHR IMR90 Hi-C 24141950 AHR 63701 754 chr7 20514661 20516505 20515873 N NA NA TMEM196 IMR90 Hi-C 24141950 TWISTNB 766001 755 chr7 26140605 26142283 26141189 Y SNX10,SNX10,SNX10,HNRNPA2B1 NFE2L3 NA NA NA NA NFE2L3 49564 756 chr7 26436953 26440469 26438521 N NA NA LOC441204 MCF7,K562 ChIA-PET 22265404 SNX10 105438 757 chr7 37733262 37735343 37733939 N NA NA NA NA NA NA EPDR1 224820 758 chr7 38349571 38352258 38350677 N NA LOC100506776 LOC100506776 IMR90 Hi-C 24141950 LOC100506776 28920 759 chr7 38373945 38376470 38375001 N NA LOC100506776 LOC100506776 K562 ChIA-PET 22265404 LOC100506776 4708 760 chr7 4652434 4653837 4652984 N NA NA SDK1,FOXK1 IMR90 Hi-C 24141950 FOXK1 68093 761 chr7 50251880 50254779 50252910 N NA NA NA NA NA NA IKZF1 89599 762 chr7 50305321 50308314 50306732 Y IKZF1,FIGNL1 IKZF1 NA NA NA NA IKZF1 36064 763 chr7 50320752 50323725 50321576 N NA IKZF1 NA NA NA NA IKZF1 20653 764 chr7 5593540 5603056 5595524,5597842 Y,N CCZ1,ACTB;NA FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 23308 765 chr7 5613842 5614966 5614542 N NA ACTB,FSCN1 RNF216 IMR90 Hi-C 24141950 FSCN1 17470 766 chr7 6120089 6122292 6121207 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 21229 767 chr7 63384905 63388911 63386577 N NA NA NA NA NA NA ZNF736 384275 768 chr7 63948302 63951558 63950580 N NA NA NA NA NA NA ZNF680 71947 769 chr7 64348390 64352523 64349324 N NA ZNF273 NA NA NA NA ZNF273 11097 770 chr7 65956919 65959834 65958644 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 83664 771 chr7 66056171 66057640 66057347 N NA LOC493754 KCTD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC493754 12673 772 chr7 66145204 66148548 66147040 N NA NA KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 RABGEF1 57095 773 chr7 6766996 6771118 6769407 N NA ZNF12,PMS2CL ZNF12 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PMS2CL 3818 774 chr7 73685718 73687288 73686628 N NA RFC2,CLIP2 RFC2,LAT2,CLIP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CLIP2 16517 775 chr7 74063887 74065099 74064514 Y GTF2IRD2B,LAT2 GTF2I NA NA NA NA GTF2I 6931 776 chr7 75471691 75472975 75472362 N NA RHBDD2 STYXL1,MDH2,HIP1,CCL26,POR,CCL24 IMR90 Hi-C 24141950 RHBDD2 35342 777 chr7 75993264 75994595 75994079 Y NA YWHAG YWHAG MCF7 ChIA-PET 22265404 YWHAG 4922 778 chr7 81475012 81477452 81476001 Y NA NA NA NA NA NA HGF 75560 779 chr7 90223287 90227191 90225652 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 CDK14 111521 780 chr7 92645076 92646838 92645942 N NA NA CDK6,FAM133B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SAMD9 100498 781 chr8 102119543 102123181 102121493 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 NA YWHAZ,FLJ42969,ZNF706 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 ZNF706 94779 782 chr8 102137003 102140606 102138817 N NA NA YWHAZ,FLJ42969,ZNF706,PABPC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 77354 783 chr8 102170270 102171792 102171361 Y PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706 ZNF706 ZNF706,YWHAZ,FLJ42969 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF706 46168 784 chr8 103174242 103175891 103174865 N NA NCALD NA NA NA NA NCALD 37107 785 chr8 103612643 103614064 103613391 Y KLF10,KLF10 NA UBR5,KLF10,ODF1,AZIN1,RRM2B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 53919 786 chr8 103800740 103802243 103801547 Y NA NA KLF10,UBR5,ODF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AZIN1 74154 787 chr8 103806135 103808712 103807624 N NA NA KLF10,UBR5,ODF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AZIN1 67685 788 chr8 125209444 125210500 125210184 Y FAM91A1,TMEM65,RNF139 NA TMEM65,FAM91A1,FER1L6,FER1L6-AS1 IMR90 Hi-C 24141950 TMEM65 174440 789 chr8 125438171 125438790 125438461 N NA RNF139 FER1L6,FER1L6-AS1,ANXA13,FAM91A1,KLHL38,TMEM65,FBXO32 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNF139 48218 790 chr8 130557770 130561388 130559346 Y NA NA NA NA NA NA FAM49B 467509 791 chr8 130593005 130595840 130594193 Y FAM49B NA NA NA NA NA FAM49B 433057 792 chr8 134910311 134912795 134911727 Y ST3GAL1 NA ST3GAL1,ZFAT IMR90 Hi-C 24141950 ST3GAL1 326128 793 chr8 135730777 135734359 135732555 N NA ZFAT ST3GAL1,ZFAT IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFAT 5485 794 chr8 135842951 135845958 135844667 N NA NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFAT 117659 795 chr8 141472894 141475555 141474748 Y NA TRAPPC9,CHRAC1 TRAPPC9,EIF2C2,CHRAC1 K562,MCF7 ChIA-PET 22265404 TRAPPC9 4216 796 chr8 142098937 142101804 142100005 Y EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 36916 797 chr8 142104101 142106916 142104558,142105710 N,Y NA;EIF2C2,SLC45A4,PTP4A3,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 31804 798 chr8 142399736 142405680 142402067 N NA PTP4A3 FLJ43860,PTP4A3,PSCA,JRK MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PTP4A3 26327 799 chr8 145910475 145912143 145911329 N NA NA ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1,ZNF34 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF251 68827 800 chr8 19613102 19616899 19615039 N NA NA CSGALNACT1,SH2D4A,PSD3,INTS10 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 INTS10 58019 801 chr8 2584182 2586693 2585144 N NA NA NA NA NA NA KBTBD11 662138 802 chr8 2590091 2593036 2591332 Y NA NA NA NA NA NA KBTBD11 668047 803 chr8 28259518 28261247 28260288 N NA ZNF395 ZNF395,FBXO16 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF395 15541 804 chr8 29229475 29231888 29230854 Y KIF13B,DUSP4 DUSP4 C8orf75,LOC286135,MIR3148,MIR548O2,TMEM66,LEPROTL1,DUSP4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 21208 805 chr8 29630054 29632268 29631349 N NA NA C8orf75,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TMEM66 308381 806 chr8 41996674 41999552 41997949 Y NA AP3M2 KAT6A,ANK1,POLB,AP3M2,VDAC3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AP3M2 10912 807 chr8 42122496 42124590 42123322 N NA IKBKB IKBKB K562 ChIA-PET 22265404 IKBKB 4230 808 chr8 49422888 49427794 49427421 N NA NA SNAI2 IMR90 Hi-C 24141950 UBE2V2 501893 809 chr8 60212920 60215046 60213622 N NA NA TOX IMR90 Hi-C 24141950 TOX 181153 810 chr8 60239273 60241463 60240275 N NA NA NA NA NA NA TOX 207506 811 chr8 61563614 61567076 61564904 N NA CHD7 CHD7,RAB2A MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD7 24248 812 chr8 61883801 61884968 61884418 N NA NA NA NA NA NA CHD7 292477 813 chr8 72647753 72650974 72649710 N NA NA NA NA NA NA LACTB2 1066306 814 chr9 103188679 103193366 103189493 N NA NA C9orf30-TMEFF1,NR4A3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TEX10 73420 815 chr9 107752755 107754529 107753834 N NA NA ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC286367 216122 816 chr9 123833187 123845171 123834326,123837403 Y,N TRAF1,TRAF1,CNTRL;NA CNTRL CNTRL,TRAF1,MEGF9,FBXW2,C5,RAB14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CNTRL 5403 817 chr9 124015314 124017273 124016220 N NA GSN RAB14,GSN,STOM IMR90 Hi-C 24141950 GSN 13107 818 chr9 126101416 126102364 126101741 N NA NA RC3H2,RABGAP1,MIR600HG,STRBP,CRB2,DENND1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 STRBP 70561 819 chr9 128169672 128171121 128170645 N NA NA PBX3 MCF7 ChIA-PET 22265404 GAPVD1 145561 820 chr9 131544780 131547058 131545977 Y NA ZER1,TBC1D13,ENDOG,C9orf114 ZER1 MCF7 ChIA-PET 22265404 TBC1D13 2452 821 chr9 132105535 132109380 132106391 N NA C9orf106 IER5L,C9orf106,LOC100506190,C9orf50,ASB6,METTL11A,PPP2R4 H1ESC,HELA,IMR90,MCF7 5C,Hi-C,ChIA-PET 22955621,24141950,22265404 C9orf106 22240 822 chr9 132140747 132149120 132146041 Y FAM73B,C9orf106,USP20,USP20,TOR1B,C9orf78,ASB6 NA LOC100506190,C9orf50,METTL11A,C9orf106,SH3GLB2,PPP2R4,CRAT,IER5L,PTGES IMR90,K562,GM12878,HELA,H1ESC,MCF7 Hi-C,5C,ChIA-PET 24141950,22955621,22265404 C9orf106 57452 823 chr9 132174241 132177973 132175667 N NA NA C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 72966 824 chr9 132198774 132200957 132199643 N NA LOC100506190 C9orf50,PPP2R4,LOC100506190,IER5L,C9orf106,METTL11A,ASB6 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 49982 825 chr9 132220040 132224637 132223003,132220582 N,Y NA;FAM73B,USP20,USP20,C9orf78,ASB6 LOC100506190 PPP2R4,CRAT,ASB6,METTL11A,IER5L,C9orf106,C9orf50,LOC100506190 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 26302 826 chr9 132242950 132247217 132245258 N NA LOC100506190 PPP2R4,CRAT,IER5L,C9orf106,LOC100506190,C9orf50,METTL11A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 3722 827 chr9 134247518 134250084 134248949 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 55393 828 chr9 134267914 134279488 134269800 N NA PRRC2B PRRC2B,NUP214,FAM78A,PPAPDC3,POMT1,UCK1 IMR90 Hi-C 24141950 PRRC2B 25989 829 chr9 139512220 139523524 139513770 N NA EGFL7 MIR4674,NOTCH1,INPP5E,SEC16A,C9orf163,EGFL7,GPSM1,DNLZ IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EGFL7 29784 830 chr9 139533172 139542105 139540355 N NA EGFL7,AGPAT2 MIR4674,NOTCH1,INPP5E,SEC16A,C9orf163,EGFL7 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 EGFL7 11203 831 chr9 139542660 139545932 139544363 N NA EGFL7,AGPAT2 SEC16A,C9orf163 K562 ChIA-PET 22265404 EGFL7 7376 832 chr9 19229275 19232158 19230737 N NA NA DENND4C IMR90 Hi-C 24141950 DENND4C 58591 833 chr9 30300300 30302390 30301524 N NA NA NA NA NA NA ACO1 2082211 834 chr9 36485224 36491267 36487360 N NA NA RNF38,MELK IMR90 Hi-C 24141950 MELK 81592 835 chr9 45355829 45357458 45357123 N NA NA NA NA NA NA ALDH1B1 6963168 836 chr9 45440826 45442530 45441899 N NA NA NA NA NA NA ALDH1B1 7048165 837 chr9 4901376 4902482 4901882 N NA NA NA NA NA NA JAK2 82763 838 chr9 5605663 5609340 5608691 N NA KIAA1432 JAK2,RCL1,INSL6,CD274 IMR90 Hi-C 24141950 KIAA1432 19779 839 chr9 66454536 66460328 66457943,66455299 N,N NA;NA NA NA NA NA NA PIP5K1B 4860288 840 chr9 66470248 66472723 66471798 N NA NA LOC642236 IMR90 Hi-C 24141950 PIP5K1B 4847893 841 chr9 66486308 66487479 66486731 N NA NA LOC642236 IMR90 Hi-C 24141950 PIP5K1B 4833137 842 chr9 6680468 6682851 6681321 Y UHRF2,KDM4C NA KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 74790 843 chr9 6702776 6705244 6704171 N NA NA KDM4C MCF7 ChIA-PET 22265404 KDM4C 52397 844 chr9 73033096 73037648 73034639 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 3523 845 chr9 75746497 75748142 75747444 Y ANXA1 ANXA1 ANXA1 IMR90 Hi-C 24141950 ANXA1 18639 846 chr9 79184346 79193356 79186386,79189444,79191311 N,Y,Y NA;NA;NA NA PRUNE2 IMR90 Hi-C 24141950 RFK 174902 847 chr9 79194086 79198933 79195098 N NA NA NA NA NA NA RFK 184642 848 chr9 92106070 92114581 92113066 N NA SEMA4D SEMA4D IMR90 Hi-C 24141950 SEMA4D 11459 849 chr9 93909091 93911608 93910739 N NA NA LOC100129316,AUH,NFIL3 IMR90 Hi-C 24141950 AUH 212598 850 chr9 93923179 93927915 93926430 N NA NA AUH,LOC100129316,NFIL3 IMR90 Hi-C 24141950 AUH 196291 851 chr9 99448681 99449675 99449285 N NA C9orf21 NA NA NA NA C9orf21 31082 852 chr9 99983232 99985789 99983920 N NA BDAG1 NA NA NA NA BDAG1 14919 853 chrM 2204 16571 3812,12611,5775 N,N,N NA;NA;NA NA NA NA NA NA NA -1 854 chrX 102230446 102233753 102231926 N NA NA NA NA NA NA BEX1 85415 855 chrX 102238230 102243790 102240260 N NA NA NA NA NA NA BEX1 75378 856 chrX 106916407 106922010 106918970 N NA PRPS1 TSC22D3,PRPS1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PRPS1 44753 857 chrX 106927573 106929321 106928219 N NA NA NA NA NA NA PRPS1 55919 858 chrX 115004439 115005043 115004893 N NA NA NA NA NA NA WDR44 2474993 859 chrX 119619134 119620485 119619910 N NA LAMP2 LAMP2 K562 ChIA-PET 22265404 LAMP2 15930 860 chrX 123350919 123352882 123351683 N NA NA NA NA NA NA STAG2 256444 861 chrX 129084893 129088659 129086795 N NA UTP14A UTP14A K562 ChIA-PET 22265404 UTP14A 44796 862 chrX 129089844 129092303 129091386 N NA UTP14A,BCORL1 UTP14A K562 ChIA-PET 22265404 BCORL1 46861 863 chrX 129094693 129096249 129095392 N NA BCORL1 UTP14A K562 ChIA-PET 22265404 BCORL1 42915 864 chrX 129113130 129122944 129115641 N NA BCORL1 UTP14A,BCORL1,XPNPEP2,ZDHHC9 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCORL1 16220 865 chrX 12972620 12976464 12973902 Y ATXN3L,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 16762 866 chrX 13105331 13107088 13106478 Y TLR7,TLR8,TMSB4X NA TMSB4X,FAM9C MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMSB4X 112105 867 chrX 131120587 131122798 131121698 N NA MST4 MST4 K562 ChIA-PET 22265404 MST4 34447 868 chrX 135990940 135992355 135991565 N NA RBMX RBMX K562,MCF7 ChIA-PET 22265404 RBMX 28001 869 chrX 16900252 16901316 16900913 Y TXLNG RBBP7 RBBP7,TXLNG MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 RBBP7 11718 870 chrX 18692649 18694460 18693214 Y PHKA2,CDKL5 NA NA NA NA NA PHKA2 308020 871 chrX 35860236 35861625 35861027 N NA NA NA NA NA NA RPGR 2325163 872 chrX 38737829 38740214 38739525 N NA NA NA NA NA NA MID1IP1 77144 873 chrX 39863864 39866426 39864985 N NA NA NA NA NA NA BCOR 170156 874 chrX 39867178 39875254 39871826,39868429 Y,N BCOR,BCOR;NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 161328 875 chrX 40061043 40062404 40061883 N NA BCOR NA NA NA NA BCOR 24461 876 chrX 40125321 40127385 40126144 N NA NA BCOR K562 ChIA-PET 22265404 BCOR 88739 877 chrX 40868925 40870409 40869733 N NA NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 74479 878 chrX 41133954 41137527 41136089 N NA NA USP9X,DDX3X IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DDX3X 55124 879 chrX 45609040 45631313 45624863,45629747,45615535,45622351,45617931,45613268 N,N,N,N,Y,N NA;NA;NA;NA;NA;NA NA MIR221,MIR222 IMR90 Hi-C 24141950 ZNF673 675311 880 chrX 45708924 45711682 45710938 N NA NA NA NA NA NA ZNF673 594942 881 chrX 4627537 4629972 4628546 N NA NA NA NA NA NA PRKX 995862 882 chrX 4852687 4855829 4853995 N NA NA NA NA NA NA PRKX 1221012 883 chrX 48594745 48597058 48596076 N NA SUV39H1 SUV39H1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUV39H1 39614 884 chrX 52004443 52005909 52005057 Y NA NA NA NA NA NA GSPT2 517962 885 chrX 54664862 54667847 54666085 Y NA NA ITIH6,MAGED2 MCF7 ChIA-PET 22265404 GNL3L 108218 886 chrX 64806830 64820833 64808195 N NA NA MSN IMR90 Hi-C 24141950 LAS1L 52144 887 chrX 64828412 64830419 64829386 N NA NA NA NA NA NA MSN 57092 888 chrX 65204605 65209964 65207263 N NA NA MIR223 IMR90 Hi-C 24141950 MSN 317094 889 chrX 65293053 65296521 65294894 N NA NA NA NA NA NA MSN 405542 890 chrX 68113813 68115533 68114854 N NA NA PJA1 IMR90 Hi-C 24141950 EFNB1 64973 891 chrX 78401298 78405658 78402341 Y P2RY10,GPR174 GPR174 NA NA NA NA GPR174 20811 892 chrX 78513950 78516210 78514685 Y P2RY10,GPR174 NA NA NA NA NA GPR174 87481 893 chrX 9308699 9310083 9309209,9309199 Y,Y TBL1X,TBL1X;TBL1X,TBL1X NA TBL1X IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1X 121252 894 chrX 9319308 9322074 9320382 N NA NA TBL1X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TBL1X 109261