Enhancer_ID chr start end center FANTOM5 associated_gene-FANTOM5 associated_gene-50Kb associated_gene-4DGenome Cell/Tissue Detection_method PMID closest_gene distance 1 chr1 101727747 101729089 101728365 N NA NA SLC30A7 IMR90 Hi-C 24141950 DPH5 236385 2 chr1 108585691 108589257 108588279,108586664 N,N NA;NA NA VAV3 IMR90 Hi-C 24141950 VAV3 78146 3 chr1 108590644 108597101 108593671,108596431,108591675 N,Y,N NA;NA;NA NA VAV3 IMR90 Hi-C 24141950 VAV3 83099 4 chr1 110643702 110646362 110644961 N NA NA FAM40A,ALX3,SLC6A17,UBL4B,LOC440600,RBM15,HBXIP IMR90 Hi-C 24141950 FAM40A 66461 5 chr1 11410068 11411068 11410621 Y NA NA FBXO2,FBXO44,UBIAD1 IMR90 Hi-C 24141950 UBIAD1 76813 6 chr1 11412830 11414117 11413281 N NA NA FBXO2,FBXO44,UBIAD1 IMR90 Hi-C 24141950 UBIAD1 79575 7 chr1 117367358 117370172 117369266 N NA NA PTGFRN K562 ChIA-PET 22265404 TTF2 232777 8 chr1 12693766 12695697 12694398 N NA DHRS3 VPS13D IMR90 Hi-C 24141950 DHRS3 15946 9 chr1 147790370 147791376 147790705 Y NA NA NA NA NA NA CHD1L 1076079 10 chr1 149214622 149216253 149215216 N NA NA NA NA NA NA HIST2H2BE 641979 11 chr1 152019891 152021361 152020679 N NA S100A11 NA NA NA NA S100A11 10380 12 chr1 15929820 15930708 15930165,15930169 N,N NA;NA DDI2 DDI2,DNAJC16,AGMAT,FBLIM1,PLEKHM2,SLC25A34,TMEM82 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 DDI2 13245 13 chr1 161359256 161360691 161359890 Y HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A NA NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SDHC 75090 14 chr1 161368423 161370418 161369375 Y NA NA ADAMTS4,NDUFS2,APOA2,TOMM40L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SDHC 84257 15 chr1 165345057 165346641 165345870 Y NA NA LRRC52,LOC400794 IMR90 Hi-C 24141950 MGST3 253469 16 chr1 166458788 166459741 166459171 N NA NA NA NA NA NA POGK 348983 17 chr1 167586113 167587494 167586774 Y POU2F1,POU2F1,CD247,RCSD1 RCSD1 RCSD1 IMR90 Hi-C 24141950 RCSD1 11980 18 chr1 17229590 17233188 17231510,17229697 Y,N PADI4,PADI2;NA NA CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATP13A2 105235 19 chr1 172787773 172789078 172789017 N NA NA CENPL,DARS2,TNFSF4,LOC100506023,RC3H1,SERPINC1,TNFSF18 IMR90 Hi-C 24141950 C1orf9 285513 20 chr1 173091685 173093114 173092517 N NA NA TNFSF4,LOC100506023 IMR90 Hi-C 24141950 TNFSF4 83357 21 chr1 17461147 17464164 17462934 N NA NA PADI1,PADI2,PADI3,PADI4 IMR90 Hi-C 24141950 SDHB 80482 22 chr1 17516476 17519988 17518618 N NA NA NBPF1,PADI1,PADI2,PADI3 IMR90 Hi-C 24141950 SDHB 135811 23 chr1 182227999 182229980 182228838 Y RNASEL,GLUL,GLUL NA GLUL K562 ChIA-PET 22265404 GLUL 131361 24 chr1 184119370 184123330 184121867 N NA NA C1orf21,RGL1 IMR90 Hi-C 24141950 TSEN15 98559 25 chr1 184264966 184266750 184265771 Y NA NA C1orf21,EDEM3,TSEN15 IMR90 Hi-C 24141950 C1orf21 89400 26 chr1 185344383 185345379 185344911 Y FAM129A,RNF2,TRMT1L,SWT1,TRMT1L,SWT1,IVNS1ABP NA IVNS1ABP,LOC100288079 IMR90 Hi-C 24141950 IVNS1ABP 57922 27 chr1 19831995 19832758 19832554 N NA CAPZB CAPZB,C1orf151-NBL1 IMR90 Hi-C 24141950 CAPZB 19929 28 chr1 198525220 198527488 198526224 Y PTPRC NA NA NA NA NA PTPRC 80649 29 chr1 198589403 198592440 198590179,198590432 Y,Y NEK7,PTPRC;NEK7,PTPRC PTPRC NA NA NA NA PTPRC 15697 30 chr1 204462520 204464499 204463533 N NA PIK3C2B,MDM4 PIK3C2B,PPP1R15B,LOC127841 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 PIK3C2B 3046 31 chr1 204475272 204477881 204476011 N NA PIK3C2B,MDM4 PPP1R15B,MDM4,PIK3C2B MCF7,K562 ChIA-PET 22265404 MDM4 7626 32 chr1 208020460 208022013 208021782 N NA NA CD34 IMR90 Hi-C 24141950 CD46 95077 33 chr1 208031327 208038430 208037746 N NA NA NA NA NA NA CD46 105944 34 chr1 212731884 212733062 212732373 Y NA NA ATF3 K562,MCF7 ChIA-PET 22265404 FAM71A 64727 35 chr1 2143964 2144936 2144408 N NA SKI SKI,MORN1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SKI 15198 36 chr1 222010923 222012279 222011465 Y DUSP10,DUSP10 NA DUSP10,MIA3 IMR90 Hi-C 24141950 DUSP10 95407 37 chr1 224685196 224687181 224686250 Y NA NA WDR26,CNIH3 IMR90 Hi-C 24141950 WDR26 63195 38 chr1 225631889 225633553 225632781 N NA LBR TMEM63A,LBR,ENAH,SRP9,EPHX1,PYCR2,LEFTY2,C1orf55 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LBR 15332 39 chr1 226189762 226191015 226190569 Y H3F3A,C1orf55 C1orf55 NA NA NA NA C1orf55 2696 40 chr1 229073242 229075074 229074079 N NA NA RHOU IMR90 Hi-C 24141950 RAB4A 331805 41 chr1 229264709 229267072 229265990 N NA NA RHOU,NUP133 IMR90 Hi-C 24141950 RAB4A 139807 42 chr1 229289363 229292270 229290897 N NA NA RHOU,RAB4A IMR90 Hi-C 24141950 RAB4A 114609 43 chr1 229545605 229546901 229546271 N NA ACTA1 NA NA NA NA ACTA1 22942 44 chr1 231243770 231245401 231244743 N NA NA AGT,FAM89A,TRIM67 IMR90 Hi-C 24141950 FAM89A 67775 45 chr1 232734052 232736150 232735285 Y NA NA TSNAX-DISC1 IMR90 Hi-C 24141950 SIPA1L2 82809 46 chr1 234910049 234915424 234911459,234914362 Y,Y IRF2BP2;IRF2BP2 NA IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100506810 50260 47 chr1 234979667 234981893 234980448 Y IRF2BP2 NA LINC00184,LOC100506810,IRF2BP2 IMR90 Hi-C 24141950 LOC100506810 119878 48 chr1 235086198 235092141 235091310 Y IRF2BP2,ARID4B,ARID4B NA IRF2BP2,LOC100506810 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 200115 49 chr1 235095845 235100378 235098340 N NA NA IRF2BP2,LOC100506810,LINC00184,TARBP1,LOC100506795 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 191878 50 chr1 235104688 235118652 235115555,235116491 N,N NA;NA NA IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOMM20 173604 51 chr1 235146500 235149207 235147860 N NA NA LINC00184,TARBP1,LOC100506795,IRF2BP2,LOC100506810 IMR90 Hi-C 24141950 TOMM20 143049 52 chr1 235246085 235247750 235246831 Y ARID4B,ARID4B TOMM20 IRF2BP2 MCF7,K562 ChIA-PET 22265404 TOMM20 44506 53 chr1 236101285 236103261 236102163 Y LYST NA LYST,NID1 IMR90 Hi-C 24141950 LYST 71065 54 chr1 236108472 236110430 236109496 Y LYST NA LYST,NID1,GNG4,B3GALNT2 IMR90 Hi-C 24141950 LYST 78252 55 chr1 24246312 24247478 24246682 N NA CNR2,PNRC2 GALE,HMGCL,SRSF10,LOC100506963,PITHD1 K562 ChIA-PET 22265404 CNR2 6495 56 chr1 245115861 245118257 245117159 N NA EFCAB2 EFCAB2,HNRNPU,HNRNPU-AS1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EFCAB2 15027 57 chr1 249167176 249168959 249168041 N NA SH3BP5L,ZNF672,ZNF692,PGBD2 ZNF692,PGBD2,MIR3124,SH3BP5L K562,MCF7 ChIA-PET 22265404 ZNF692 13861 58 chr1 25359625 25361321 25360597 Y RUNX3,SYF2,C1orf63 NA RUNX3,CLIC4 IMR90 Hi-C 24141950 RUNX3 68124 59 chr1 26248477 26250664 26249547 N NA STMN1 STMN1,PAFAH2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 STMN1 15484 60 chr1 26823987 26828857 26827512 Y PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A HMGN2,RPS6KA1 HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 HMGN2 25085 61 chr1 26945656 26948815 26947799 Y SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1 NA RPS6KA1,ARID1A,GPN2,GPATCH3,ZDHHC18,DHDDS,HMGN2,SFN,PIGV,NUDC,NR0B2,C1orf172 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ARID1A 73707 62 chr1 32014392 32015891 32015064 N NA NA FABP3,SERINC2,LOC284551,PEF1,HCRTR1,NKAIN1,TINAGL1 IMR90 Hi-C 24141950 PEF1 94947 63 chr1 32409120 32410873 32410143 N NA PTP4A2 KHDRBS1,SPOCD1 IMR90 Hi-C 24141950 PTP4A2 5132 64 chr1 32450259 32451336 32450834 N NA PTP4A2,KHDRBS1 SPOCD1,KHDRBS1,BAI2,COL16A1,TMEM39B,PTP4A2 IMR90 Hi-C 24141950 KHDRBS1 28155 65 chr1 33446303 33447343 33446977 Y RNF19B RNF19B RNF19B,AK2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RNF19B 16017 66 chr1 33504702 33506298 33505620 N NA AK2 NA NA NA NA AK2 2190 67 chr1 35090449 35092353 35091275 N NA NA CSMD2 IMR90 Hi-C 24141950 C1orf212 233064 68 chr1 35730278 35731480 35730824 N NA ZMYM4 ZMYM4,SFPQ IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZMYM4 3088 69 chr1 36951437 36952743 36952294 N NA MRPS15,CSF3R NA NA NA NA CSF3R 2522 70 chr1 38474359 38475930 38475182 N NA SF3A3,FHL3,UTP11L NA NA NA NA UTP11L 2454 71 chr1 40402105 40403215 40402852 N NA MFSD2A CAP1,PPT1,MFSD2A,MYCL1,TRIT1 IMR90 Hi-C 24141950 MFSD2A 17569 72 chr1 42500990 42502364 42501707 N NA NA HIVEP3,CCDC30 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HIVEP3 116612 73 chr1 44532677 44535193 44533884 N NA NA SLC6A9,DMAP1,RNF220,CCDC24 IMR90 Hi-C 24141950 CCDC24 75397 74 chr1 44845889 44859371 44846635,44855102,44850484 N,N,N NA;NA;NA ERI3,RNF220 RNF220,C1orf228,TMEM53,DMAP1,ERI3 IMR90 Hi-C 24141950 RNF220 11589 75 chr1 54928943 54931745 54929594 Y NA NA TMEM59,TCEANC2,SSBP3,CYB5RL,MRPL37 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SSBP3 56851 76 chr1 54954127 54955723 54954646 N NA NA TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACOT11 58084 77 chr1 55431221 55432628 55431788 Y NA NA TMEM61,HEATR8-TTC4,BSND,PCSK9 IMR90 Hi-C 24141950 PARS2 200995 78 chr1 568975 570075 569951 N NA NA NA NA NA NA LOC100288069 143993 79 chr1 65534052 65534926 65534772 N NA NA AK4,DNAJC6,LEPR,JAK1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 JAK1 101865 80 chr1 66155751 66158405 66156705 N NA NA AK4,DNAJC6,PDE4B IMR90 Hi-C 24141950 JAK1 723564 81 chr1 8013536 8015666 8014311 N NA PARK7 NA NA NA NA PARK7 6048 82 chr1 82626200 82628923 82627121 N NA NA NA NA NA NA SAMD13 2135126 83 chr1 90222185 90225256 90223227 Y NA NA LRRC8C,FLJ27354,LRRC8D IMR90 Hi-C 24141950 LRRC8D 61317 84 chr1 92037077 92038591 92037867 Y NA NA TGFBR3,HSP90B3P,EPHX4,CDC7 IMR90 Hi-C 24141950 CDC7 70673 85 chr1 94223336 94225488 94224765 Y DNTTIP2 NA MIR760,BCAR3,LOC100129046,FNBP1L IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNTTIP2 119274 86 chr1 9488574 9489574 9489125 Y NA NA H6PD,SPSB1,SLC25A33,MIR34A,GPR157 IMR90 Hi-C 24141950 SLC25A33 109954 87 chr1 95185315 95188237 95186510 N NA NA F3,ABCD3,ALG14 IMR90 Hi-C 24141950 F3 177902 88 chr1 98788252 98791216 98789560 Y NA NA MIR137HG,MIR2682,LOC729987,DPYD IMR90 Hi-C 24141950 DPYD 401637 89 chr1 98852424 98853769 98852523 N NA NA NA NA NA NA DPYD 465809 90 chr1 98924292 98926559 98925545 N NA NA NA NA NA NA DPYD 537677 91 chr1 99906766 99907765 99907393 Y NA NA NA NA NA NA SLC35A3 527775 92 chr10 106096716 106099241 106098267 N NA ITPRIP ITPRIP,GSTO1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ITPRIP 3053 93 chr10 115742144 115744047 115743023 N NA NA DCLRE1A,NHLRC2,ADRB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ADRB1 59759 94 chr10 115784036 115785566 115784946 N NA ADRB1 NHLRC2 IMR90 Hi-C 24141950 ADRB1 18240 95 chr10 115855319 115856928 115856323 N NA NA NA NA NA NA ADRB1 51513 96 chr10 116560170 116561902 116561307 Y NA FAM160B1 AFAP1L2,ABLIM1 IMR90 Hi-C 24141950 FAM160B1 19601 97 chr10 126604460 126606624 126605402 N NA ZRANB1 ZRANB1,CTBP2,METTL10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZRANB1 24068 98 chr10 22311139 22312917 22311609 N NA DNAJC1 ARMC3,COMMD3-BMI1,LOC100499489,NEBL,PIP4K2A IMR90 Hi-C 24141950 DNAJC1 18489 99 chr10 22516114 22518971 22518259 N NA LOC100130992 COMMD3-BMI1,LOC100499489,PIP4K2A,ARMC3,MSRB2,LOC100130992,DNAJC1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 22030 100 chr10 22532301 22537571 22536197 Y NA LOC100130992 ARMC3,SPAG6,LOC100130992 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100130992 3430 101 chr10 22758634 22766369 22765075 Y ARMC3,SPAG6 LOC100499489 ARMC3 IMR90 Hi-C 24141950 LOC100499489 31776 102 chr10 22767537 22771875 22769074 N NA LOC100499489 NA NA NA NA LOC100499489 40679 103 chr10 23828070 23830691 23829547 N NA NA NA NA NA NA OTUD1 99872 104 chr10 30507677 30510706 30509251 N NA NA KIAA1462,MTPAP IMR90 Hi-C 24141950 MTPAP 127561 105 chr10 30817646 30819408 30818637 Y MAP3K8,ZNF438 NA MAP3K8,KIAA1462,MTPAP,LOC729668,LYZL2 IMR90 Hi-C 24141950 MAP3K8 94696 106 chr10 30830941 30832617 30831637,30831488 Y,Y MAP3K8,ZNF438,ZNF438;MAP3K8,ZNF438,ZNF438 NA MAP3K8,LOC729668,KIAA1462,LYZL2 IMR90 Hi-C 24141950 MAP3K8 107991 107 chr10 31995649 31997606 31996788 N NA NA ZEB1,ARHGAP12 IMR90 Hi-C 24141950 ARHGAP12 220164 108 chr10 32666166 32668842 32667875 N NA EPC1 EPC1 IMR90 Hi-C 24141950 EPC1 30053 109 chr10 32734435 32736368 32735047 N NA NA C10orf68 MCF7 ChIA-PET 22265404 EPC1 98322 110 chr10 33269022 33271235 33269609 Y C10orf68 ITGB1 ITGB1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ITGB1 21729 111 chr10 3845419 3847041 3846428 N NA KLF6 LOC100216001,LOC338588,KLF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 17946 112 chr10 3852895 3854604 3853693 Y KLF6 KLF6 LOC100216001,LOC338588,KLF6,AKR1E2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF6 25422 113 chr10 43469489 43471633 43470903 N NA NA RET MCF7 ChIA-PET 22265404 CSGALNACT2 162301 114 chr10 43915241 43917464 43916494 N NA HNRNPF ZNF487P K562,MCF7 ChIA-PET 22265404 HNRNPF 10545 115 chr10 45143076 45144359 45143881 Y NA NA TMEM72-AS1 IMR90 Hi-C 24141950 TMEM72 262405 116 chr10 48572584 48574479 48573426 N NA NA GPRIN2,GDF10 IMR90 Hi-C 24141950 MAPK8 1035208 117 chr10 5332249 5336803 5333956,5336138 Y,N NA;NA NA AKR1E2,tAKR IMR90 Hi-C 24141950 NET1 117715 118 chr10 69523099 69524764 69523662 N NA NA NA NA NA NA DNAJC12 73173 119 chr10 6970685 6974020 6971550 N NA NA LOC100507127,SFMBT2 IMR90 Hi-C 24141950 LOC439949 348298 120 chr10 7028163 7031072 7029411,7030858 N,N NA;NA NA SFMBT2 IMR90 Hi-C 24141950 LOC439949 405776 121 chr10 7125628 7128688 7127237 N NA NA SFMBT2,LOC100507127 IMR90 Hi-C 24141950 SFMBT2 324760 122 chr10 72741571 72743086 72742105 N NA NA CDH23 IMR90 Hi-C 24141950 PCBD1 93030 123 chr10 73648122 73649453 73648808 N NA PSAP PSAP,SPOCK2,DNAJB12,CHST3,CDH23,ASCC1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PSAP 37040 124 chr10 74019553 74021793 74020707 Y C10orf54,PSAP,DNAJB12,DDIT4 ANAPC16,DDIT4 DNAJB12 K562 ChIA-PET 22265404 DDIT4 11884 125 chr10 7516831 7518996 7517941 N NA NA NA NA NA NA SFMBT2 63383 126 chr10 7524862 7527774 7526992 N NA NA NA NA NA NA SFMBT2 71414 127 chr10 75716149 75717208 75716554 Y FUT11,NDST2 PLAU,VCL CAMK2G,PLAU,C10orf55,VCL,AP3M1,LOC100507331,KIAA0913,NDST2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 VCL 40664 128 chr10 77190560 77192310 77191506 N NA ZNF503-AS2,ZNF503 ZNF503-AS2,ZNF503,C10orf11,KCNMA1 IMR90 Hi-C 24141950 ZNF503 29047 129 chr10 89825977 89828177 89826857 Y KLLN,PTEN NA PTEN,RNLS,KLLN IMR90 Hi-C 24141950 PTEN 202782 130 chr10 90845736 90848094 90846946 Y LIPA,CH25H NA FAS,LIPA,CH25H IMR90 Hi-C 24141950 FAS 95448 131 chr10 94516231 94518193 94517202 N NA NA EXOC6,KIF11,HHEX IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HHEX 66550 132 chr10 97852782 97854187 97853448 N NA CCNJ,LOC728558,ZNF518A LOC728558 MCF7 ChIA-PET 22265404 LOC728558 2790 133 chr11 104575331 104577353 104576653 Y CARD17,CASP5,CARD16,CASP4,CASP4 NA GRIA4 IMR90 Hi-C 24141950 LOC643733 211549 134 chr11 104728605 104730942 104730060 N NA NA NA NA NA NA LOC643733 57960 135 chr11 109826599 109827687 109827163 N NA NA NA NA NA NA ZC3H12C 136400 136 chr11 109842213 109845045 109843678 N NA NA NA NA NA NA ZC3H12C 119042 137 chr11 109869440 109873222 109870962 Y FDX1,ZC3H12C NA ZC3H12C IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZC3H12C 90865 138 chr11 109939015 109942226 109940354 Y FDX1,ZC3H12C ZC3H12C ZC3H12C K562 ChIA-PET 22265404 ZC3H12C 21861 139 chr11 109947825 109949273 109948780 Y ZC3H12C ZC3H12C ZC3H12C MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZC3H12C 14814 140 chr11 118722552 118723744 118723041 N NA NA DDX6,CXCR5,BCL9L,MIR4492 IMR90 Hi-C 24141950 BCL9L 57869 141 chr11 118740251 118742198 118741329 Y MLL,VPS11,RPS25,CXCR5,CXCR5,CCDC84,CCDC153,CBL,DDX6 BCL9L BCL9L,CXCR5,DDX6,MIR4492 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCL9L 39415 142 chr11 119454516 119455939 119455072 Y NA NA TRIM29,USP2,LOC100499227 IMR90 Hi-C 24141950 USP2 202080 143 chr11 123299857 123302900 123301448 N NA NA CLMP IMR90 Hi-C 24141950 GRAMD1B 93628 144 chr11 123349548 123351209 123350131 N NA GRAMD1B CLMP,MIR4493,GRAMD1B IMR90 Hi-C 24141950 GRAMD1B 45319 145 chr11 124350438 124352702 124351107 N NA NA OR10G9,PANX3,TBRG1 IMR90 Hi-C 24141950 TBRG1 140040 146 chr11 124594544 124596295 124595555 N NA NRGN,ESAM NA NA NA NA NRGN 13534 147 chr11 124980744 124982319 124981663 N NA SLC37A2,TMEM218 CCDC15,TMEM218,PKNOX2 IMR90 Hi-C 24141950 TMEM218 7539 148 chr11 127746564 127749308 127748590 N NA NA NA NA NA NA FLI1 814503 149 chr11 127908552 127910549 127909739 N NA NA KCNJ1,ETS1 IMR90 Hi-C 24141950 FLI1 653262 150 chr11 127923825 127925102 127924623 N NA NA KCNJ1,FLI1,LOC100507392 IMR90 Hi-C 24141950 FLI1 638709 151 chr11 127928429 127929598 127928868 N NA NA KCNJ1,FLI1,LOC100507392 IMR90 Hi-C 24141950 FLI1 634213 152 chr11 128526280 128530754 128526821,128528537 N,N NA;NA FLI1,LOC100507392 KCNJ1,ETS1,LOC100507392,FLI1 IMR90 Hi-C 24141950 FLI1 33057 153 chr11 128531654 128533498 128533123 N NA FLI1,LOC100507392 KCNJ1,LOC100507392,FLI1,ETS1 IMR90 Hi-C 24141950 FLI1 30313 154 chr11 129148442 129152347 129149571 N NA NA ARHGAP32 IMR90 Hi-C 24141950 ARHGAP32 86349 155 chr11 129183912 129185531 129184553 N NA NA ARHGAP32,KCNJ1 IMR90 Hi-C 24141950 ARHGAP32 121819 156 chr11 129193624 129195154 129194506 N NA NA ARHGAP32 IMR90 Hi-C 24141950 ARHGAP32 131531 157 chr11 130307741 130310401 130309192 N NA NA ADAMTS8,ADAMTS15,SNX19 IMR90 Hi-C 24141950 ZBTB44 123134 158 chr11 13229119 13230066 13229480 N NA NA ARNTL,BTBD10 IMR90 Hi-C 24141950 BTBD10 254772 159 chr11 133428352 133429905 133429095 N NA NA NA NA NA NA NCAPD3 664521 160 chr11 17228962 17230408 17229557 N NA PIK3C2A NA NA NA NA PIK3C2A 37608 161 chr11 1813492 1814875 1813933 N NA IFITM10,MOB2 IGF2,INS-IGF2,MOB2,IFITM10,LSP1,MIR4298,KRTAP5-6,FAM99B,IGF2-AS1,KRTAP5-5 IMR90 Hi-C 24141950 MOB2 27991 162 chr11 33933555 33935103 33934279 N NA LMO2 LMO2 IMR90 Hi-C 24141950 LMO2 19719 163 chr11 35061515 35063001 35061915 Y CD44 NA CD44,SLC1A2,PDHX IMR90 Hi-C 24141950 CD44 97416 164 chr11 35067609 35073659 35069028,35072360 Y,N CD44;NA NA SLC1A2,CD44,PDHX IMR90 Hi-C 24141950 CD44 86758 165 chr11 35078975 35082270 35080690 N NA NA CD44,SLC1A2,PDHX IMR90 Hi-C 24141950 CD44 78147 166 chr11 355171 356566 355817 N NA IFITM2,IFITM1 SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IFITM1 41180 167 chr11 46264098 46265666 46265043 Y NA NA DGKZ,PHF21A,CREB3L1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PHF21A 121113 168 chr11 47415144 47417696 47416469 N NA MYBPC3,SPI1,SLC39A13,PSMC3 SPI1,SLC39A13 K562,MCF7 ChIA-PET 22265404 SLC39A13 12350 169 chr11 47938772 47940103 47939642 Y OR4B1,OR4S1,NUP160 NA PTPRJ,NUP160 IMR90 Hi-C 24141950 PTPRJ 62007 170 chr11 59312207 59313986 59312920 N NA NA NA NA NA NA OSBP 69631 171 chr11 59316224 59319866 59317340,59318051 N,N NA;NA NA PATL1,OSBP K562 ChIA-PET 22265404 OSBP 63751 172 chr11 60809066 60810373 60809775 Y SDHAF2,CD5,CD6 NA CD5,VPS37C,SLC15A3,TMEM132A IMR90 Hi-C 24141950 SLC15A3 89809 173 chr11 60838342 60839548 60838742 N NA NA CD5 IMR90 Hi-C 24141950 VPS37C 89368 174 chr11 61792275 61793772 61793163 Y DAGLA,FTH1 NA FADS3,FADS2,FTH1,BEST1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FTH1 57143 175 chr11 63940957 63950110 63949211,63941424 Y,N NA;NA MACROD1,STIP1,FERMT3,TRPT1,NUDT22,DNAJC4 MACROD1 MCF7,K562 ChIA-PET 22265404 STIP1 3477 176 chr11 64266503 64268766 64267365 Y RASGRP2 NA NRXN2,RASGRP2,PYGM,SLC22A12,SLC22A11 IMR90,HELA,K562 Hi-C,5C 24141950,22955621 RPS6KA4 139878 177 chr11 64917932 64919249 64918293 N NA TM7SF2,ZNHIT2,MRPL49,FAU,SYVN1,CAPN1 SYVN1,CAPN1,SPDYC,GPHA2,C11orf85,SAC3D1,NAALADL1,ARL2-SNX15,ZFPL1,CDCA5,FAU,C11orf2,ZNHIT2,MRPL49,TM7SF2,SLC22A20,POLA2,CDC42EP2,DPF2,TIGD3,SLC25A45 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SYVN1 15929 178 chr11 65243779 65245737 65244458 N NA MALAT1,SCYL1 SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 MALAT1 19496 179 chr11 65259467 65261084 65260326 Y BATF2,FAU,CDC42EP2,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8 MALAT1,SCYL1 MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1 IMR90 Hi-C 24141950 MALAT1 4149 180 chr11 69195391 69198280 69197181 Y ORAOV1,MYEOV NA MYEOV,TPCN2,CCND1,ORAOV1 IMR90 Hi-C 24141950 MYEOV 133769 181 chr11 69214762 69217478 69216281 N NA NA MYEOV,CCND1,ORAOV1 IMR90 Hi-C 24141950 MYEOV 153140 182 chr11 69230421 69231483 69231038 N NA NA MYEOV,ORAOV1,CCND1 IMR90 Hi-C 24141950 MYEOV 168799 183 chr11 69257690 69259701 69258862 N NA NA CCND1,TPCN2,MYEOV,ORAOV1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MYEOV 196068 184 chr11 72858980 72870061 72863710,72861204,72865394,72868648 Y,N,Y,Y FCHSD2;NA;FCHSD2;NA FCHSD2 FCHSD2,MIR4692,STARD10,ATG16L2,P2RY6,ARAP1,P2RY2,ARHGEF17 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 FCHSD2 5837 185 chr11 73489904 73491172 73490577 Y UCP2 RAB6A,MRPL48 MRPL48,CHCHD8,PAAF1,RAB6A IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 MRPL48 7745 186 chr11 75944994 75947782 75946317 Y NA NA C11orf30,MAP6,UVRAG,WNT11,PRKRIR,GUCY2E,DGAT2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PRKRIR 144098 187 chr11 76340163 76341974 76341111 N NA NA NA NA NA NA TSKU 152311 188 chr11 85893797 85895341 85894601 N NA NA PICALM,EED,C11orf73,CCDC83,SYTL2 IMR90 Hi-C 24141950 EED 60465 189 chr11 85912935 85914601 85914010 Y PICALM,PICALM EED PICALM,CCDC83,EED IMR90 Hi-C 24141950 EED 41205 190 chr11 9384964 9386744 9386088 Y ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7 TMEM41B,IPO7 ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 IPO7 19425 191 chr11 94988625 94990556 94989650 N NA SESN3 NA NA NA NA SESN3 24379 192 chr11 95070245 95071611 95070644 N NA NA SESN3 IMR90 Hi-C 24141950 SESN3 105999 193 chr11 95097731 95099220 95098721 Y NA NA NA NA NA NA SESN3 133485 194 chr11 95175810 95177618 95177008 N NA NA NA NA NA NA SESN3 211564 195 chr11 9634511 9636568 9635440 Y DENND5A,ZNF143,WEE1,SWAP70 WEE1,SWAP70 WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 WEE1 39283 196 chr11 98471210 98472792 98472058 N NA NA NA NA NA NA JRKL 2348052 197 chr12 10097560 10100337 10099337 N NA CLEC2A,CLEC12A NA NA NA NA CLEC12A 3578 198 chr12 105351709 105352792 105352178 N NA C12orf45 CHST11,SLC41A2,TXNRD1,C12orf45,ALDH1L2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C12orf45 27306 199 chr12 105963838 105965714 105964441 N NA NA CKAP4,NUAK1 IMR90 Hi-C 24141950 C12orf75 239424 200 chr12 105973751 105975546 105975181,105974714 N,N NA;NA NA NUAK1,CKAP4 IMR90 Hi-C 24141950 C12orf75 249337 201 chr12 110516899 110518288 110517623 Y GIT2,RAD9B,C12orf76 C12orf76,IFT81 C12orf76 K562 ChIA-PET 22265404 C12orf76 11399 202 chr12 111042991 111044473 111043663 Y ARPC3,PPTC7,HVCN1,HVCN1 PPTC7,TCTN1 GPN3,FAM216A,RAD9B,PPTC7,C12orf76,TCTN1,ARPC3,VPS29,HVCN1,PPP1CC IMR90 Hi-C 24141950 TCTN1 7359 203 chr12 116756991 116759048 116758021 N NA MED13L MED13L,MIR4472-2,LINC00173,C12orf49 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MED13L 42000 204 chr12 117038788 117041197 117039565 Y MED13L,MAP1LC3B2 NA MED13L,MIR4472-2,LINC00173,MAP1LC3B2 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 LINC00173 67548 205 chr12 117042421 117043761 117042986 N NA NA MED13L,MIR4472-2,LINC00173,MAP1LC3B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LINC00173 71181 206 chr12 117072744 117075931 117073512 N NA NA MED13L,FBXW8,MAP1LC3B2,LINC00173 IMR90 Hi-C 24141950 C12orf49 99912 207 chr12 117098879 117102653 117099992 N NA NA MED13L,LINC00173,C12orf49 IMR90 Hi-C 24141950 C12orf49 73190 208 chr12 117109622 117125591 117111053 N NA NA MED13L,C12orf49,FBXW8 IMR90 Hi-C 24141950 C12orf49 50252 209 chr12 120728383 120730886 120729799,120729977 N,N NA;NA PXN,SIRT4 PXN,GCN1L1,LOC100506649,RPLP0,RAB35,SIRT4,CCDC64,DYNLL1,SRSF9,RNF10,COX6A1,PLA2G1B,MSI1,LOC100506668,COQ5,TRIAP1,GATC IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SIRT4 9238 210 chr12 121524820 121526510 121525325 N NA OASL,P2RX7 MLEC,CAMKK2,P2RX4,ACADS,RNF10,CABP1,POP5,UNC119B,SPPL3,C12orf43,P2RX7 IMR90 Hi-C 24141950 P2RX7 44112 211 chr12 121565195 121568432 121566873 N NA P2RX7 P2RX4,P2RX7 MCF7,K562 ChIA-PET 22265404 P2RX7 2190 212 chr12 12162388 12164119 12163060 Y ETV6,BCL2L14 NA ETV6,LOC338817,CDKN1B IMR90 Hi-C 24141950 LOH12CR1 345901 213 chr12 125197292 125199256 125198392 Y NCOR2,UBC NA NCOR2,ZNF664-FAM101A IMR90 Hi-C 24141950 NCOR2 145282 214 chr12 125352999 125354371 125353959 N NA SCARB1,UBC NA NA NA NA SCARB1 4480 215 chr12 125405337 125407204 125405851 Y UBC UBC NCOR2,SCARB1,UBC IMR90 Hi-C 24141950 UBC 5750 216 chr12 131955405 131959338 131958871 N NA NA NA NA NA NA SFSWAP 236297 217 chr12 132999767 133016806 133014228,133016199 N,Y NA;FBRSL1 NA P2RX2,GALNT9,POLE,LOC100507055,EP400NL,FBRSL1 IMR90 Hi-C 24141950 FBRSL1 50351 218 chr12 14408450 14412096 14411257 N NA NA PLBD1,ATF7IP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATF7IP 106515 219 chr12 14412961 14414275 14413488 N NA NA ATF7IP IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ATF7IP 104336 220 chr12 1710530 1711388 1710840 N NA FBXL14 FBXL14 K562,MCF7 ChIA-PET 22265404 FBXL14 7199 221 chr12 25537471 25540126 25539213 Y NA NA BCAT1,CASC1,KRAS,LYRM5,RASSF8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KRAS 133617 222 chr12 26426857 26428647 26427815 Y NA NA SSPN,BHLHE41,ITPR2 IMR90 Hi-C 24141950 ITPR2 557484 223 chr12 28342338 28345514 28343833 N NA NA KLHDC5,CCDC91 IMR90 Hi-C 24141950 CCDC91 64619 224 chr12 31984986 31986955 31985863 Y AMN1,H3F3C NA NA NA NA NA AMN1 102878 225 chr12 4324146 4325344 4324711 Y NA NA CCND2 IMR90 Hi-C 24141950 CCND2 57558 226 chr12 45969002 45970949 45969903 N NA NA NA NA NA NA LOC400027 150755 227 chr12 46775963 46779360 46778094,46777296 N,N NA;NA SLC38A2 SLC38A1 K562,MCF7 ChIA-PET 22265404 SLC38A2 9318 228 chr12 47053099 47057589 47054923 N NA NA SLC38A2,SLC38A1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SLC38A2 286454 229 chr12 47670386 47671131 47670789 Y NA NA AMIGO2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100233209 60160 230 chr12 49625204 49628377 49627570 N NA TUBA1A,TUBA1C RHEBL1,DHH,LMBR1L,TUBA1A,TUBA1C,TUBA1B,PRPH,MLL2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TUBA1C 30488 231 chr12 50425942 50427862 50426923 N NA RACGAP1 AQP2,ACCN2,RACGAP1,SMARCD1 IMR90 Hi-C 24141950 RACGAP1 6635 232 chr12 5052454 5053761 5053219 N NA NA KCNA1 IMR90 Hi-C 24141950 NDUFA9 294190 233 chr12 53764399 53766264 53764929 N NA AAAS,SP7,SP1 SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SP1 7715 234 chr12 54816395 54817881 54817204 Y GPR84,ZNF385A,ITGA5,NCKAP1L ZNF385A,ITGA5,GTSF1 ZNF385A IMR90 Hi-C 24141950 ITGA5 3345 235 chr12 54821443 54825316 54822076 N NA ZNF385A,ITGA5,GTSF1 ZNF385A,ITGA5,CBX5,HNRNPA1,NFE2,GTSF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ITGA5 8393 236 chr12 57823571 57825689 57824721 N NA GLI1 NA NA NA NA GLI1 28229 237 chr12 65549446 65551242 65550256 N NA LEMD3 LEMD3 MCF7 ChIA-PET 22265404 LEMD3 12109 238 chr12 68758162 68759616 68758972 Y IFNG,RAP1B MDM1 RAP1B,NUP107,LOC100507250 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MDM1 32001 239 chr12 68774187 68776135 68774900 N NA MDM1 RAP1B IMR90 Hi-C 24141950 MDM1 48026 240 chr12 69724368 69725388 69724975 Y LYZ YEATS4 YEATS4 K562 ChIA-PET 22265404 YEATS4 28144 241 chr12 77829175 77830612 77829953 N NA NA NA NA NA NA E2F7 369815 242 chr12 8122286 8124453 8123406 Y CLEC6A,NECAP1,FOXJ2,CLEC4A,C3AR1,SLC2A3 SLC2A3 SLC2A3,FOXJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SLC2A3 33394 243 chr12 8142126 8143302 8142733 N NA FOXJ2 FOXJ2 IMR90 Hi-C 24141950 FOXJ2 42057 244 chr12 8178158 8180056 8179402 Y NA FOXJ2,C3AR1 PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 FOXJ2 5303 245 chr12 92601381 92603125 92602650 N NA NA LOC256021 K562 ChIA-PET 22265404 LOC256021 64934 246 chr12 9515882 9520914 9517496,9519991 N,N NA;NA NA NA NA NA NA DDX12P 79854 247 chr12 96514465 96515689 96515011 N NA NA ELK3 IMR90 Hi-C 24141950 ELK3 72518 248 chr12 96570520 96571490 96570967 Y LTA4H,ELK3 ELK3 LTA4H IMR90 Hi-C 24141950 ELK3 16717 249 chr12 98668192 98669844 98669385 N NA NA NA NA NA NA TMPO 239507 250 chr12 98764140 98766059 98765369 N NA NA NA NA NA NA TMPO 143292 251 chr12 9916281 9920797 9917401 Y KLRB1,CLEC2D,CLEC2D,CLEC2D,OLR1,KLRF1,GABARAPL1,CLEC7A,CLEC2B,CLEC12A,CD69 CLECL1,CD69 NA NA NA NA CD69 2784 252 chr12 9925781 9928458 9927391 N NA CLECL1,CD69 NA NA NA NA CD69 12284 253 chr12 9933432 9941023 9934106,9935498 N,N NA;NA CLECL1,CD69,KLRF1 CD69 K562 ChIA-PET 22265404 CD69 19935 254 chr12 9941878 9954033 9950755,9943212 N,N NA;NA CD69,KLRF1 CD69,CLEC7A K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLRF1 26044 255 chr12 9964936 9974837 9966889 Y KLRB1,CD69,KLRD1,KLRD1,KLRF2,KLRF1,CLEC2B KLRF1 NA NA NA NA KLRF1 5240 256 chr13 100077218 100079164 100077635 N NA NA MIR548AN,UBAC2,DOCK9,UBAC2-AS1 IMR90 Hi-C 24141950 TM9SF2 74564 257 chr13 100115652 100118331 100117017 N NA TM9SF2 MIR548AN,UBAC2,TM9SF2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TM9SF2 35397 258 chr13 103242645 103245282 103244814 Y ERCC5,TPP2 TPP2 BIVM-ERCC5,TPP2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TPP2 4004 259 chr13 105791237 105793293 105792145 N NA NA NA NA NA NA ARGLU1 1427221 260 chr13 114916052 114917780 114916946 N NA RASA3 LOC100506394,GAS6,RASA3,CDC16,CHAMP1,FLJ44054,ATP4B IMR90 Hi-C 24141950 RASA3 17957 261 chr13 114926653 114928479 114927608 Y RASA3 RASA3 LOC100506394,GAS6,RASA3,CDC16,CHAMP1,FLJ44054,ATP4B IMR90 Hi-C 24141950 RASA3 28558 262 chr13 21792189 21794168 21793054 N NA MRP63,SKA3 NA NA NA NA SKA3 41448 263 chr13 21917905 21919714 21919140 N NA NA ZDHHC20 IMR90 Hi-C 24141950 ZDHHC20 113794 264 chr13 22582783 22584379 22583805 Y EFHA1 NA NA NA NA NA EFHA1 404428 265 chr13 27295162 27296520 27296027 N NA NA GPR12 IMR90 Hi-C 24141950 USP12 449513 266 chr13 27556634 27557884 27557315 Y USP12,RPL21,RASL11A NA RASL11A,USP12,RPL21,MTIF3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP12 188149 267 chr13 29104872 29105885 29105419 N NA NA FLT1,PAN3,POMP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 POMP 127256 268 chr13 30607521 30608988 30608093 N NA NA UBL3,LOC440131 IMR90 Hi-C 24141950 UBL3 182701 269 chr13 31263722 31265550 31264822 N NA ALOX5AP HMGB1,USPL1,ALOX5AP,TEX26-AS1 IMR90 Hi-C 24141950 ALOX5AP 22065 270 chr13 46784528 46786648 46786006 N NA LCP1 NA NA NA NA LCP1 28069 271 chr13 46869168 46872258 46870678 N NA NA NA NA NA NA LCP1 112709 272 chr13 46895417 46895994 46895890 N NA NA NA NA NA NA LCP1 138958 273 chr13 48071643 48072850 48072489 N NA NA NA NA NA NA SUCLA2 502612 274 chr13 48795115 48797161 48796175 N NA ITM2B ITM2B MCF7 ChIA-PET 22265404 ITM2B 10113 275 chr13 49152711 49154203 49153156 N NA RCBTB2 ITM2B,RB1 IMR90 Hi-C 24141950 RCBTB2 45395 276 chr13 50713952 50716314 50715209 N NA DLEU2 DLEU7,DLEU2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLEU2 14275 277 chr13 50782411 50783542 50783249 N NA NA DLEU7,DLEU2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLEU2 82734 278 chr13 51086042 51088151 51086958 N NA NA DLEU2,DLEU1 IMR90 Hi-C 24141950 DLEU2 386365 279 chr13 51473471 51475757 51474653 N NA RNASEH2B RNASEH2B MCF7 ChIA-PET 22265404 RNASEH2B 8057 280 chr13 77911307 77913831 77913477 N NA MYCBP2 MYCBP2 K562 ChIA-PET 22265404 MYCBP2 10130 281 chr13 77947127 77950411 77949160 Y NA MYCBP2 NA NA NA NA MYCBP2 45950 282 chr13 78759664 78761431 78760724 N NA NA NA NA NA NA POU4F1 416264 283 chr13 89355979 89357769 89357278 N NA NA NA NA NA NA MIR17HG 2642305 284 chr13 89358814 89361168 89360104 N NA NA NA NA NA NA MIR17HG 2638906 285 chr13 89571091 89573415 89572357 N NA NA NA NA NA NA MIR17HG 2426659 286 chr13 89584871 89586496 89585745 N NA NA NA NA NA NA MIR17HG 2413578 287 chr13 91707539 91709971 91709215 Y NA NA NA NA NA NA MIR17HG 290103 288 chr13 91806386 91808354 91807700 N NA NA NA NA NA NA MIR17HG 191720 289 chr13 91867789 91870784 91869343 N NA NA MIR17HG K562 ChIA-PET 22265404 MIR17HG 129290 290 chr13 95200575 95201858 95200994 N NA TGDS NA NA NA NA TGDS 46653 291 chr13 99413232 99414539 99414208 N NA NA NA NA NA NA STK24 183836 292 chr13 99776091 99777985 99777380,99777241 N,N NA;NA DOCK9 MIR548AN,UBAC2 IMR90 Hi-C 24141950 DOCK9 37431 293 chr14 101180220 101182558 101181471 N NA DLK1 DLK1,MEG3,WDR25,MIR2392,LINC00523 IMR90 Hi-C 24141950 DLK1 10644 294 chr14 101236735 101238588 101237479 N NA DLK1 WDR25,LINC00523,DLK1 IMR90 Hi-C 24141950 DLK1 43533 295 chr14 101586477 101588399 101587457 N NA NA DIO3OS,LINC00523,MIR127,MIR433,MIR337,MIR432,MIR665,RTL1,MIR136,MEG8,MIR493,MIR431,MIR412,MIR541,MIR409,MIR410,MIR369,MIR656 IMR90 Hi-C 24141950 DLK1 393275 296 chr14 107251999 107253715 107252304 N NA NA NA NA NA NA C14orf80 1295807 297 chr14 25130497 25133049 25132062 Y LTB4R,CTSG NA NA NA NA NA CTSG 85031 298 chr14 25142245 25143297 25142598 N NA NA NA NA NA NA CTSG 96779 299 chr14 35808123 35811918 35809224,35810957 Y,Y BAZ1A,FAM177A1,PPP2R3C,RALGAPA1,NFKBIA;BAZ1A,FAM177A1,RALGAPA1,NFKBIA PSMA6 PPP2R3C,KIAA0391,PSMA6,NFKBIA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 PSMA6 46549 300 chr14 35820597 35822258 35821858 N NA NA KIAA0391,PSMA6,SNX6,PPP2R3C,NFKBIA IMR90 Hi-C 24141950 NFKBIA 51702 301 chr14 38594032 38595402 38595169 N NA NA CLEC14A IMR90 Hi-C 24141950 SEC23A 977035 302 chr14 50327745 50329216 50328329 N NA NEMF,ARF6 SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 8206 303 chr14 50334466 50336106 50334941 Y RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6 NEMF,ARF6 METTL21D,SOS2,ARF6,C14orf182,NEMF,C14orf183 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NEMF 14927 304 chr14 50506682 50507837 50507339 N NA NA C14orf182,ARF6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C14orf183 51524 305 chr14 52687318 52688413 52687842 N NA NA TXNDC16,C14orf166,GPR137C,ERO1L IMR90 Hi-C 24141950 PTGER2 92603 306 chr14 55573762 55575606 55575118 Y GCH1,MAPK1IP1L,FBXO34,FBXO34,LGALS3 LGALS3 MAPK1IP1L IMR90 Hi-C 24141950 LGALS3 20329 307 chr14 65696141 65697164 65696647 N NA NA LOC645431,FUT8,MIR4708 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAX 126914 308 chr14 69280472 69283478 69281449 Y DCAF5 NA RAD51B,ZFYVE26 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACTN1 162605 309 chr14 69285732 69288999 69287979,69286367 Y,N NA;NA NA RAD51B,ZFYVE26,ZFP36L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACTN1 157084 310 chr14 71348089 71350587 71349927 N NA PCNX PCNX IMR90 Hi-C 24141950 PCNX 23535 311 chr14 71353934 71355383 71355310 N NA PCNX MAP3K9 IMR90 Hi-C 24141950 PCNX 18739 312 chr14 71786441 71789100 71787674 N NA NA SIPA1L1,PCNX IMR90 Hi-C 24141950 LOC145474 165478 313 chr14 75713765 75715875 75714416 Y NEK9,FOS FOS,LOC731223 TMED10,LOC731223,NEK9,ZC2HC1C,FOS,BATF,JDP2 IMR90 Hi-C 24141950 FOS 29606 314 chr14 75799398 75802121 75800235 N NA LOC731223 NEK9,TMED10,JDP2,BATF,FLVCR2 IMR90 Hi-C 24141950 LOC731223 38291 315 chr14 75807224 75809277 75807870 Y FOS,FLVCR2,FLVCR2,BATF LOC731223 JDP2,BATF IMR90 Hi-C 24141950 LOC731223 46117 316 chr14 75981260 75982318 75981831 N NA BATF JDP2,BATF,FLVCR2,ZC2HC1C,TMED10,NEK9,LOC731223,C14orf1 IMR90 Hi-C 24141950 BATF 6466 317 chr14 77384197 77385931 77384669 Y IRF2BPL NA IRF2BPL,POMT2,GSTZ1,KIAA1737,ZDHHC22 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ANGEL1 104914 318 chr14 77421732 77424229 77422596 N NA NA IRF2BPL,KIAA1737 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 IRF2BPL 70805 319 chr14 77427782 77428985 77428363 Y NA NA IRF2BPL MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 IRF2BPL 66049 320 chr14 77466313 77467640 77467070 Y ZDHHC22,NGB,VASH1,KIAA1737,IRF2BPL IRF2BPL NA NA NA NA IRF2BPL 27394 321 chr14 77503174 77509177 77504622,77506688 Y,N NA;NA IRF2BPL IRF2BPL IMR90 Hi-C 24141950 IRF2BPL 8140 322 chr14 78085801 78086929 78086474 N NA SPTLC2 SPTLC2 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SPTLC2 2691 323 chr14 82231899 82233834 82232748 N NA NA NA NA NA NA SEL1L 231694 324 chr14 85881838 85883247 85883110 N NA NA NA NA NA NA GPR65 2588221 325 chr14 90186185 90187818 90186549 N NA NA EFCAB11,LOC400236,FOXN3,PRO1768 IMR90 Hi-C 24141950 FOXN3 100691 326 chr14 90848610 90851528 90850310 N NA CALM1 C14orf102,CALM1,TTC7B,EFCAB11,TDP1,PSMC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CALM1 11799 327 chr14 94808283 94809728 94808641 Y SERPINA1 SERPINA1 NA NA NA NA SERPINA1 47301 328 chr14 97924610 97926235 97925253 N NA NA NA NA NA NA VRK1 660926 329 chr15 100047292 100050796 100049220 Y MEF2A NA MEF2A,LRRC28,TTC23 IMR90 Hi-C 24141950 MEF2A 55337 330 chr15 101665837 101669316 101667357 Y NA NA CHSY1,LRRK1,SELS IMR90 Hi-C 24141950 CHSY1 122821 331 chr15 101688304 101689925 101689249 N NA NA NA NA NA NA CHSY1 102212 332 chr15 20850875 20852203 20851371 N NA NA NA NA NA NA TUBGCP5 1981192 333 chr15 31726621 31729185 31727884 N NA NA KLF13 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF13 107538 334 chr15 38959764 38961169 38960410 N NA NA RASGRP1,FAM98B IMR90 Hi-C 24141950 FAM98B 213436 335 chr15 42782558 42784345 42783394 N NA ZFP106,SNAP23 NA NA NA NA SNAP23 3159 336 chr15 43414547 43416025 43415412 Y NA UBR1,TMEM62 NA NA NA NA TMEM62 9697 337 chr15 49999023 49999923 49999527 N NA NA C15orf33,DTWD1 IMR90 Hi-C 24141950 DTWD1 85797 338 chr15 51175198 51178346 51177723 N NA AP4E1 TRPM7,SPPL2A,USP50,ASB18,AP4E1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,19890323,22265404 AP4E1 22523 339 chr15 52273647 52275003 52274191 N NA LEO1,MAPK6 MAPK6,GNB5,MYO5C,BCL2L10 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 LEO1 9689 340 chr15 56335075 56336560 56335952 N NA NEDD4 NEDD4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NEDD4 49240 341 chr15 58602031 58603320 58602749 N NA NA LIPC,FAM63B,ADAM10 IMR90 Hi-C 24141950 LIPC 120855 342 chr15 58647063 58648812 58648243 N NA NA ADAM10,LIPC,FAM63B IMR90 Hi-C 24141950 LIPC 75363 343 chr15 58702058 58703504 58702696 N NA LIPC ADAM10,LIPC IMR90 Hi-C 24141950 LIPC 20671 344 chr15 62682033 62685029 62682699 N NA NA TLN2,MGC15885 IMR90 Hi-C 24141950 VPS13C 329369 345 chr15 63728660 63729969 63729180 N NA NA FBXL22,LOC100130855,USP3,CA12,APH1B,RAB8B,LACTB IMR90 Hi-C 24141950 USP3 66741 346 chr15 65184672 65190866 65185057,65187161,65186268,65189702 N,Y,Y,Y NA;ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16;ZNF609,OAZ2,PLEKHO2,SPG21,SPG21;OAZ2,PLEKHO2,SPG21,SPG21 ANKDD1A SPG21 IMR90 Hi-C 24141950 ANKDD1A 13235 347 chr15 65587844 65589534 65588315 N NA PARP16 MTFMT,IGDCC4,PDCD7,RASL12,IGDCC3,OSTBETA,CILP,PARP16,CLPX,UBAP1L,DPP8,PTPLAD1,SPG21,KBTBD13 MCF7,K562 ChIA-PET 22265404 PARP16 8826 348 chr15 65595924 65598000 65596923 Y DENND4A PARP16 PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PARP16 16906 349 chr15 66124754 66127298 66125444 N NA DENND4A,RAB11A SLC24A1,DENND4A,PTPLAD1,C15orf44,RAB11A,MEGF11 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB11A 34499 350 chr15 66661400 66663466 66662667 N NA TIPIN,MAP2K1 NA NA NA NA TIPIN 12346 351 chr15 66909202 66910512 66909983 N NA NA SMAD6 IMR90 Hi-C 24141950 SMAD6 84162 352 chr15 67134257 67135822 67135009 N NA NA SMAD6,SNAPC5 IMR90 Hi-C 24141950 SMAD6 139583 353 chr15 67158069 67159306 67158590 N NA NA SMAD6,IQCH IMR90 Hi-C 24141950 SMAD6 163395 354 chr15 67279069 67280382 67279624 N NA NA SMAD3,IQCH,LOC100506686,SKOR1 IMR90 Hi-C 24141950 SMAD3 77813 355 chr15 68175320 68178181 68177199 N NA NA PIAS1,CLN6,CALML4,C15orf61,LOC100506686,IQCH,SKOR1 IMR90 Hi-C 24141950 SKOR1 57379 356 chr15 70392584 70394035 70393835 N NA TLE3 NA NA NA NA TLE3 2328 357 chr15 70550730 70552158 70551372 N NA NA LOC145837,C15orf50 IMR90 Hi-C 24141950 TLE3 160474 358 chr15 70765244 70768250 70767309 N NA NA C15orf50,KIF23,LOC145837,TLE3 IMR90 Hi-C 24141950 UACA 287600 359 chr15 70817799 70827593 70826793,70819011,70820763 N,N,N NA;NA;NA NA TLE3,LOC145837 IMR90 Hi-C 24141950 UACA 228257 360 chr15 70879928 70882448 70881041 N NA NA UACA IMR90 Hi-C 24141950 UACA 173402 361 chr15 70919720 70921853 70920544 N NA NA LARP6,C15orf50,UACA IMR90 Hi-C 24141950 UACA 133997 362 chr15 75444561 75447377 75445683 Y SIN3A,SIN3A,CSK,C15orf39 C15orf39 PPCDC,C15orf39,SCAMP5 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 C15orf39 46844 363 chr15 77196732 77198212 77197791 N NA SCAPER,RCN2 ETFA IMR90 Hi-C 24141950 SCAPER 20515 364 chr15 77280520 77281868 77281058 Y PSTPIP1 PSTPIP1 PSTPIP1,TSPAN3,RCN2 IMR90 Hi-C 24141950 PSTPIP1 5597 365 chr15 85872735 85873968 85872791 N NA AKAP13 AKAP13 IMR90 Hi-C 24141950 AKAP13 49903 366 chr15 88943947 88946913 88945311 N NA NA NA NA NA NA MRPL46 63720 367 chr15 89583663 89585052 89584235 N NA ABHD2 MFGE8,ABHD2 IMR90 Hi-C 24141950 ABHD2 46329 368 chr15 93362733 93364521 93363624 Y ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2 NA ASB9P1,CHD2,LOC100507217 IMR90 Hi-C 24141950 LOC100507217 61552 369 chr15 93374207 93376312 93375158 Y NA LOC100507217 CHD2,LOC100507217,ASB9P1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 LOC100507217 49761 370 chr15 94772884 94777309 94773872 N NA NA MCTP2 IMR90 Hi-C 24141950 MCTP2 64121 371 chr15 94830311 94834826 94831183 Y MCTP2 MCTP2 MCTP2,NMUR2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 MCTP2 6604 372 chr15 97036400 97039056 97038448 N NA NA NA NA NA NA IGF1R 2153705 373 chr15 99143428 99144074 99143851 N NA IGF1R NA NA NA NA IGF1R 48687 374 chr16 11317696 11318971 11318136 Y NA SOCS1 CLEC16A,SOCS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SOCS1 31068 375 chr16 11326389 11327660 11327047 Y SNN,LITAF,LITAF,NUBP1,CIITA,SOCS1 SOCS1 CLEC16A IMR90 Hi-C 24141950 SOCS1 22379 376 chr16 22206840 22207779 22207051 Y NA EEF2K POLR3E,EEF2K,UQCRC2,PDZD9,C16orf52 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EEF2K 9813 377 chr16 23837305 23838842 23838169 Y GGA2 PRKCB PRKCB K562 ChIA-PET 22265404 PRKCB 8458 378 chr16 25077161 25078850 25078217 N NA LOC554206,LCMT1 LCMT1,LOC100506655 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC554206 34099 379 chr16 2917727 2918973 2918344 N NA FLYWCH2,FLYWCH1 PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 FLYWCH2 14223 380 chr16 30645004 30646478 30645742 Y CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14 ZNF785,ZNF689,PRR14,FBRS PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PRR14 15763 381 chr16 48467282 48469226 48468620 N NA SIAH1 MIR548AE2,SIAH1,N4BP1 IMR90 Hi-C 24141950 SIAH1 48053 382 chr16 50717299 50718750 50717771 N NA SNX20,NOD2 NA NA NA NA SNX20 2035 383 chr16 57333102 57334387 57333908 N NA NA NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,POLR2C,DOK4,CCDC102A,RSPRY1,ARL2BP,CCL17,COQ9,CX3CL1,CCL22,GPR114 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ARL2BP 54064 384 chr16 68504087 68505355 68504709 N NA NA PRMT7,SMPD3 IMR90 Hi-C 24141950 ZFP90 68306 385 chr16 72235669 72238390 72237603 Y AP1G1,ATXN1L,KIAA0174,DHX38 NA HPR,PMFBP1,LOC100506172 IMR90 Hi-C 24141950 TXNL4B 107454 386 chr16 72698072 72699385 72698931 N NA NA ZFHX3 IMR90 Hi-C 24141950 ZFHX3 393149 387 chr16 73155930 73157717 73156973 Y NA NA ZFHX3 IMR90 Hi-C 24141950 ZFHX3 63396 388 chr16 80350486 80352428 80351605 N NA NA NA NA NA NA CDYL2 485747 389 chr16 85569048 85570580 85569880 Y NA NA KIAA0182,LOC727710 IMR90 Hi-C 24141950 KIAA0182 74449 390 chr16 85586120 85593709 85587973,85590443 N,N NA;NA NA GINS2,KIAA0182,LINC00311,LOC400548,FAM92B,KIAA0513,LOC727710,C16orf74,COX4NB IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0182 51320 391 chr16 85604750 85605749 85605468 N NA KIAA0182 LINC00311,FAM92B IMR90 Hi-C 24141950 KIAA0182 39280 392 chr16 86019699 86021660 86020821 N NA NA COX4NB,COX4I1,MTHFSD,LOC400550,FLJ30679,IRF8,C16orf74,LOC146513 IMR90 Hi-C 24141950 COX4I1 186526 393 chr16 87811207 87813352 87812804 Y NA KLHDC4 ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLHDC4 11609 394 chr16 87839318 87841306 87840516 N NA KLHDC4 SLC7A5 MCF7 ChIA-PET 22265404 KLHDC4 39720 395 chr16 88323477 88324383 88323871 Y BANP NA BANP,ZNF469,CA5A,KLHDC4 IMR90 Hi-C 24141950 ZFPM1 195631 396 chr16 89118455 89119901 89119392 N NA ACSF3 CBFA2T3,ACSF3,CDH15,PIEZO1,LOC400558,SLC22A31,TRAPPC2L,GALNS,LINC00304 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ACSF3 40316 397 chr17 15012737 15014183 15013724 N NA NA NA NA NA NA TTC19 888511 398 chr17 15302131 15302876 15302569 N NA NA PMP22,TEKT3,CDRT4,FAM18B2-CDRT4 IMR90 Hi-C 24141950 TTC19 599818 399 chr17 16891286 16892485 16891735 N NA NA MPRIP,FLCN IMR90 Hi-C 24141950 MPRIP 53589 400 chr17 21178709 21179684 21179210 Y CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3 MAP2K3 MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAP2K3 8284 401 chr17 25571138 25572903 25571692 Y LGALS9,WSB1 WSB1 WSB1,KSR1,MIR4522 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 WSB1 48203 402 chr17 25680063 25681763 25680944 Y NA NA KSR1,WSB1,MIR4522 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 WSB1 58957 403 chr17 28877508 28879575 28878200 N NA TBC1D29 CPD,GOSR1,LRRC37BP1,TMIGD1,SUZ12P IMR90 Hi-C 24141950 TBC1D29 7009 404 chr17 29922966 29925217 29923818 Y EVI2A NA NA NA NA NA C17orf79 261109 405 chr17 32712910 32715670 32714462 Y CCL2,CCL7,CCL8,CCL1 NA ACCN1,CCT6B,ZNF830,NLE1 IMR90 Hi-C 24141950 CCL2 130614 406 chr17 34128319 34129358 34128765 N NA TAF15 AP2B1,RASL10B,C17orf50,MMP28 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TAF15 7130 407 chr17 34222503 34224025 34223156 N NA C17orf66,CCL5,RDM1 NA NA NA NA CCL5 15126 408 chr17 37773629 37776029 37774348 N NA STARD3,TCAP PPP1R1B K562 ChIA-PET 22265404 STARD3 17304 409 chr17 38671251 38672453 38671901 N NA CCR7 TNS4,IGFBP4,KRT42P,CDC6,RARA,TOP2A,CCR7,GJD3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCR7 49283 410 chr17 38738038 38739277 38738926 N NA CCR7 KRT14,CCR7,KRT42P,KRT222,KRT26,KRT27,RARA,WIPF2,CDC6,GJD3,TOP2A,IGFBP4,TNS4,KRT24,KRT25,KRT28,KRT9,EIF1,SMARCE1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCR7 16302 411 chr17 39821764 39824224 39823067 N NA EIF1 KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 EIF1 20903 412 chr17 40215379 40216545 40216009 Y ATP6V0A1 NKIRAS2,DNAJC7,DHX58 RAB5C IMR90 Hi-C 24141950 DNAJC7 45664 413 chr17 41391761 41394482 41393295 N NA TMEM106A BRCA1,NBR2,NBR1,RND2,VAT1,IFI35,RPL27,TMEM106A,LOC100130581 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 TMEM106A 27867 414 chr17 41399019 41402175 41400650 N NA TMEM106A IFI35,RND2,BRCA1,VAT1,NBR2,NBR1,TMEM106A,LOC100130581,DHX8 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM106A 35125 415 chr17 41790793 41792319 41791569 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 DUSP3 64049 416 chr17 41797184 41799007 41798257 N NA NA LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5 IMR90 Hi-C 24141950 DUSP3 57361 417 chr17 44343010 44345010 44344618 N NA KANSL1 KANSL1-AS1,KANSL1 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 KANSL1 40270 418 chr17 45277271 45278612 45277555 Y NA CDC27 CDC27,MYL4,ITGB3,C17orf57,NPEPPS IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC27 10606 419 chr17 45281071 45283266 45282512 Y NA CDC27 ITGB3,CDC27,MYL4 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC27 14406 420 chr17 46516973 46518667 46517720 Y CDK5RAP3,SKAP1 NA SKAP1,HOXB3,HOXB2,HOXB-AS3,HOXB6 IMR90 Hi-C 24141950 HOXB2 103726 421 chr17 49008201 49009426 49008942 N NA NA WFIKKN2,TOB1,LOC400604,LINC00483,ANKRD40,SPAG9 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TOB1 62862 422 chr17 53653772 53654995 53654052 N NA NA PCTP IMR90 Hi-C 24141950 MMD 154431 423 chr17 62704458 62706773 62705302 Y SMURF2 SMURF2 SMURF2 IMR90 Hi-C 24141950 SMURF2 46072 424 chr17 62708163 62710964 62709655 N NA SMURF2 SMURF2,LOC146880 IMR90 Hi-C 24141950 SMURF2 49777 425 chr17 62980510 62983325 62982212 Y DDX5,CEP95,GNA13 AMZ2P1 AMZ2P1,GNA13 K562,MCF7 ChIA-PET 22265404 AMZ2P1 8807 426 chr17 63096076 63097327 63096499 N NA GNA13 RGS9,LRRC37A3,GNA13,AMZ2P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GNA13 43156 427 chr17 63118925 63120116 63119554 Y GNA13 NA RGS9,GNA13,AMZ2P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GNA13 66005 428 chr17 64939447 64945105 64940609,64941751,64944455 N,N,N NA;NA;NA NA CACNG1,HELZ,CACNG5,CACNG4 IMR90 Hi-C 24141950 HELZ 296214 429 chr17 65254461 65255666 65255289 N NA HELZ NA NA NA NA HELZ 13142 430 chr17 66015356 66017091 66016173 Y NA C17orf58,KPNA2 BPTF,C17orf58,KPNA2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KPNA2 14757 431 chr17 66083637 66084401 66084331 N NA NA NA NA NA NA KPNA2 51789 432 chr17 66233071 66237888 66233787 N NA LOC440461,AMZ2,ARSG,SLC16A6 NA NA NA NA AMZ2 6257 433 chr17 6835752 6845242 6843800 N NA NA ALOX12P2,ASGR1,SLC13A5,LOC100506713,RNASEK-C17ORF49,ALOX12,MIR497HG,SLC16A13,BCL6B,MED31,C17orf100,MIR4520A,ALOX15P1,MIR4520B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100506713 70411 434 chr17 71662284 71664580 71663529 N NA NA SDK2 IMR90 Hi-C 24141950 CDC42EP4 354141 435 chr17 73291215 73292736 73291651 N NA MRPS7,GGA3,MIF4GD,LOC100287042,SLC25A19 NA NA NA NA SLC25A19 5685 436 chr17 74993268 74995664 74994477 Y SRSF2 NA MFSD11,MGAT5B,SEC14L1 IMR90 Hi-C 24141950 SEC14L1 89061 437 chr17 75953356 75955451 75954616 Y NA TNRC6C TNRC6C,LOC100507351 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNRC6C 44867 438 chr17 76587985 76589337 76588774 N NA NA DNAH17,CYTH1,USP36 IMR90 Hi-C 24141950 CYTH1 189039 439 chr17 76929308 76930919 76930088 Y NA TIMP2,LGALS3BP TIMP2 MCF7 ChIA-PET 22265404 TIMP2 7836 440 chr17 77818370 77819266 77818793 N NA CBX8,CBX4 NA NA NA NA CBX4 5157 441 chr17 79309948 79320732 79319895 Y FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1 SLC38A10,LINC00482 ACTG1,SLC38A10,LINC00482,TMEM105,MIR4740,BAHCC1,C17orf70,FSCN2,C17orf56,C17orf89,MIR3186,NPLOC4 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 LINC00482 26900 442 chr17 80173942 80176204 80174715 N NA CCDC57,SLC16A3 CSNK1D MCF7 ChIA-PET 22265404 CCDC57 3253 443 chr17 81146539 81148868 81147335 Y METRNL NA METRNL,B3GNTL1,TBCD MCF7 ChIA-PET 22265404 METRNL 108972 444 chr18 24289878 24292994 24290703 Y TAF4B LOC728606 TAF4B IMR90 Hi-C 24141950 LOC728606 6276 445 chr18 33160523 33162807 33161527 N NA NA NA NA NA NA INO80C 82568 446 chr18 42685454 42687639 42686556 Y NA NA SLC14A2 IMR90 Hi-C 24141950 SLC14A1 616453 447 chr18 45693000 45694683 45693424 N NA NA NA NA NA NA SMAD2 235485 448 chr18 5058388 5060247 5059264 N NA NA NA NA NA NA LOC339290 177852 449 chr18 53996459 53999283 53998167 N NA NA TCF4 IMR90 Hi-C 24141950 TXNL1 306637 450 chr18 54744049 54745922 54745001 N NA NA NA NA NA NA WDR7 425433 451 chr18 54751084 54753982 54752014 N NA NA NA NA NA NA WDR7 432468 452 chr18 60764872 60770484 60767347 N NA NA NA NA NA NA BCL2 216129 453 chr19 10518500 10521240 10519658 Y P2RY11,ICAM3,S1PR5,C19orf38,ATG4D,TYK2,PDE4A,PDE4A,PDE4A TYK2,CDC37,PDE4A CDC37 MCF7,K562 ChIA-PET 22265404 CDC37 4229 454 chr19 13841335 13843251 13842492 N NA CCDC130,MRI1,C19orf53 CACNA1A IMR90 Hi-C 24141950 CCDC130 15502 455 chr19 14485571 14486940 14486081 Y NA CD97,DDX39A DDX39A K562 ChIA-PET 22265404 CD97 5016 456 chr19 16112091 16113936 16112910 N NA NA NA NA NA NA TPM4 64381 457 chr19 16394137 16395232 16394681 N NA NA EPS15L1,AP1M1,KLF2,CALR3 IMR90 Hi-C 24141950 AP1M1 85472 458 chr19 17960855 17962182 17961501 Y FAM129C,FCHO1,FCHO1,IL12RB1,IFI30,ARRDC2,JAK3 INSL3,JAK3,RPL18A PLVAP,FAM125A,TMEM221,BST2,NXNL1,UNC13A,GLT25D1,FAM129C,MAP1S,FCHO1,INSL3,B3GNT3,JAK3,SLC5A5,KCNN1,RPL18A,CCDC124,ARRDC2 IMR90 Hi-C 24141950 JAK3 2014 459 chr19 18201570 18202892 18202223 Y FCHO1,FCHO1,JAK3,UBA52,LRRC25,IFI30,FKBP8,ELL,ARRDC2,ARRDC2,IL12RB1 MAST3 MAST3 K562 ChIA-PET 22265404 MAST3 5711 460 chr19 24215921 24217536 24216633 N NA NA NA NA NA NA ZNF254 52440 461 chr19 29480952 29482357 29481679 N NA NA LOC100505835 IMR90 Hi-C 24141950 UQCRFS1 221779 462 chr19 30335909 30336986 30336404 N NA NA NA NA NA NA PLEKHF1 179582 463 chr19 33744696 33746074 33745514 Y CEBPA CEBPA CHST8,PEPD,LOC80054,CEBPA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CEBPA 47356 464 chr19 33749726 33752424 33750661,33752285 Y,N CEBPA;NA CEBPA CHST8,PEPD,LOC80054,CEBPA IMR90 Hi-C 24141950 CEBPA 41006 465 chr19 33757717 33759428 33758376 N NA CEBPA LOC80054,CEBPA,PEPD,CEBPG,CHST8 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CEBPA 34002 466 chr19 37708424 37709871 37709061 N NA ZNF585A ZNF585B,ZNF383 IMR90 Hi-C 24141950 ZNF585A 44809 467 chr19 42035547 42039137 42038041 Y CCDC97,TGFB1,B9D2,TMEM91,CEACAM4,CEACAM21,ARHGEF1 CEACAM21 CEACAM21,LOC100505495 IMR90 Hi-C 24141950 CEACAM21 43394 468 chr19 42051336 42054479 42052563 N NA CEACAM21 C19orf69,ATP5SL,LOC100505495 IMR90 Hi-C 24141950 CEACAM21 28052 469 chr19 42055011 42061380 42055791 N NA CEACAM21 LOC100505495,CEACAM21 IMR90 Hi-C 24141950 CEACAM21 21151 470 chr19 42432480 42433376 42432874 N NA ARHGEF1,RABAC1 NA NA NA NA RABAC1 30152 471 chr19 42771978 42774118 42772640 Y NA ZNF526,GSK3A,ERF,CIC,PAFAH1B3 POU2F2,LOC100505622,MIR4323 IMR90 Hi-C 24141950 ERF 12669 472 chr19 45109724 45110859 45110544 N NA PVR NA NA NA NA PVR 36239 473 chr19 45945671 45947238 45946242 Y GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB CD3EAP,PPP1R13L,ERCC1,FOSB ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2 K562,MCF7 ChIA-PET 22265404 ERCC1 18494 474 chr19 47362523 47365363 47363861 Y PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35 AP2S1 SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1 MCF7,K562 ChIA-PET 22265404 AP2S1 8320 475 chr19 48103185 48104367 48103761 Y GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1 GLTSCR1 GLTSCR1,NAPA MCF7 ChIA-PET 22265404 GLTSCR1 7086 476 chr19 488130 489756 488815 N NA TPGS1,CDC34 ODF3L2,SHC2,TPGS1,MADCAM1 MCF7,K562 ChIA-PET 22265404 TPGS1 17741 477 chr19 51713541 51714633 51714279 N NA CD33 KLK13,IGLON5,SIGLEC10 IMR90 Hi-C 24141950 CD33 13702 478 chr19 51970536 51972439 51971380 Y ZNF613,SIGLEC7,CD33,ZNF649,ZNF175,SIGLEC6,SIGLEC8,SIGLEC12,SIGLEC12 CEACAM18,SIGLEC12 NA NA NA NA CEACAM18 7399 479 chr19 54879141 54882462 54881039 N NA LAIR1 PRKCG,CACNG7,CACNG6,VSTM1,TSEN34,MBOAT7,RPS9 K562,HELA 5C 22955621 LAIR1 2420 480 chr19 54890401 54891837 54891808 N NA LAIR1 PRKCG,CACNG7,CACNG6,VSTM1,TSEN34,MBOAT7,RPS9 K562,HELA 5C 22955621 LAIR1 13680 481 chr19 54899118 54900978 54900142 N NA LAIR1 NA NA NA NA LAIR1 22397 482 chr19 56824899 56827431 56825975 N NA NA NA NA NA NA ZNF444 172364 483 chr19 6599775 6604716 6603445 N NA CD70 NA NA NA NA CD70 8612 484 chr19 7401267 7403391 7402511 N NA NA INSR,ZNF557 IMR90 Hi-C 24141950 ARHGEF18 56608 485 chr19 7413308 7415863 7414511 N NA ARHGEF18 ZNF557,INSR IMR90 Hi-C 24141950 ARHGEF18 44136 486 chr19 8258693 8260402 8259871 N NA CERS4 TIMM44,FBN3,ELAVL1,CCL25 IMR90 Hi-C 24141950 CERS4 13815 487 chr19 9419655 9421124 9420421 N NA ZNF699,ZNF559-ZNF177 NA NA NA NA ZNF699 3860 488 chr2 102679999 102681720 102680600 N NA NA IL1RL2,IL1R1 IMR90 Hi-C 24141950 IL18R1 297377 489 chr2 10424974 10426230 10425812 Y HPCAL1 HPCAL1 RRM2,NOL10,HPCAL1,C2orf48,MIR4261 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 HPCAL1 16810 490 chr2 113636995 113639675 113638423 Y IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B IL1B CKAP2L,IL1A,IL1B,IL37 IMR90 Hi-C 24141950 IL1B 42639 491 chr2 11514464 11515813 11515068 N NA ROCK2 ROCK2,E2F6,PQLC3,PDIA6,C2orf50 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ROCK2 29753 492 chr2 118942341 118945220 118943594 N NA NA NA NA NA NA INSIG2 96291 493 chr2 120160004 120161065 120160437 N NA C2orf76,DBI PCDP1 IMR90 Hi-C 24141950 DBI 35500 494 chr2 12144913 12148492 12146276 N NA NA LOC100506474,TRIB2 IMR90 Hi-C 24141950 LPIN1 258173 495 chr2 12308937 12310468 12309591 N NA NA TRIB2,LOC100506474 IMR90 Hi-C 24141950 LPIN1 422197 496 chr2 124669928 124672870 124671367 N NA NA NA NA NA NA TSN 2156807 497 chr2 128144019 128146459 128145652 N NA MAP3K2 CYP27C1,IWS1 IMR90 Hi-C 24141950 MAP3K2 43214 498 chr2 129467772 129468730 129468209 N NA NA HS6ST1 IMR90 Hi-C 24141950 HS6ST1 391601 499 chr2 132439415 132441058 132440025 N NA NA NA NA NA NA LOC150776 189029 500 chr2 134876716 134879914 134877446 N NA NA NA NA NA NA MGAT5 131916 501 chr2 136889266 136890671 136890022 Y UBXN4,CXCR4,CXCR4 CXCR4 CXCR4 K562 ChIA-PET 22265404 CXCR4 13541 502 chr2 137139022 137140756 137139952 Y CXCR4,CXCR4 NA NA NA NA NA CXCR4 263297 503 chr2 149310055 149312109 149310865 N NA NA KIF5C,ORC4 IMR90 Hi-C 24141950 EPC2 90451 504 chr2 157257406 157257875 157257736 N NA NA NR4A2,GALNT5,GPD2 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 CYTIP 1042729 505 chr2 182235767 182238227 182236998 N NA NA NA NA NA NA ITGA4 83392 506 chr2 182275265 182277240 182275895 N NA ITGA4 NA NA NA NA ITGA4 44379 507 chr2 192530899 192532388 192531679 Y OBFC2A OBFC2A OBFC2A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 OBFC2A 10410 508 chr2 196336507 196340542 196338900 N NA NA SLC39A10 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC39A10 180990 509 chr2 196397838 196403027 196401094,196398975 Y,N NA;NA NA SLC39A10 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC39A10 118505 510 chr2 199236113 199237103 199236797 N NA NA NA NA NA NA MARS2 666085 511 chr2 200093351 200095132 200094090 N NA NA NA NA NA NA C2orf69 680847 512 chr2 200447652 200449637 200448618 N NA NA NA NA NA NA C2orf69 326342 513 chr2 20549380 20551623 20550721 N NA PUM2 HS1BP3,PUM2 IMR90 Hi-C 24141950 PUM2 22236 514 chr2 20853156 20854799 20854350 N NA HS1BP3 HS1BP3 K562 ChIA-PET 22265404 HS1BP3 2292 515 chr2 217928508 217929761 217929227 Y NA NA DIRC3,IGFBP5,TNP1 IMR90 Hi-C 24141950 RPL37A 564988 516 chr2 231507632 231509577 231508717 Y GPR55,SP110,SP140,SP140L,CAB39 NA CAB39,SP140L IMR90 Hi-C 24141950 CAB39 67980 517 chr2 232418851 232420643 232419405 N NA LINC00471 NCL,SNORD20,SNORA75,NMUR1,LINC00471 IMR90 Hi-C 24141950 LINC00471 39801 518 chr2 232526054 232532521 232527158,232531241 Y,Y DIS3L2;NA PTMA COPS7B,PTMA IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PTMA 40714 519 chr2 235598249 235601442 235599624 N NA NA SH3BP4,AGAP1 IMR90 Hi-C 24141950 MSL3P1 821194 520 chr2 237446273 237448234 237447232 N NA CXCR7 IQCA1,CXCR7 IMR90 Hi-C 24141950 CXCR7 30146 521 chr2 237840723 237842480 237841494 N NA NA IQCA1 IMR90 Hi-C 24141950 COPS8 151604 522 chr2 237863964 237866246 237865192 N NA NA IQCA1 IMR90 Hi-C 24141950 COPS8 127838 523 chr2 237876016 237879784 237878252 Y NA NA IQCA1,CXCR7 IMR90 Hi-C 24141950 COPS8 114300 524 chr2 240850153 240851766 240850901 Y NA NA LOC150935,MIR4786 IMR90 Hi-C 24141950 NDUFA10 113053 525 chr2 24713337 24714936 24713868 N NA NA CENPO,NCOA1 IMR90 Hi-C 24141950 ITSN2 129940 526 chr2 26224165 26226719 26225646 Y RAB10 KIF3C,RAB10 RAB10,KIF3C,FAM59B,ASXL2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 KIF3C 18722 527 chr2 26231552 26232981 26231926 Y RAB10 KIF3C,RAB10 FAM59B,KIF3C,RAB10,ASXL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RAB10 23748 528 chr2 27978852 27980956 27979873 N NA MRPL33 FOSL2,RBKS,MRPL33 MCF7 ChIA-PET 22265404 MRPL33 13628 529 chr2 28589149 28590469 28590093 N NA FOSL2 BRE,RBKS,FOSL2,GPN1,CCDC121,SLC4A1AP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FOSL2 25310 530 chr2 28601040 28602576 28601680 N NA FOSL2 RBKS,BRE,GPN1,CCDC121,SLC4A1AP,MRPL33,LOC100505716,FOSL2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FOSL2 13203 531 chr2 37550623 37552894 37552035 N NA NA QPCT,FAM82A1,PRKD3,EIF2AK2,C2orf56 IMR90 Hi-C 24141950 C2orf56 91849 532 chr2 37676515 37678821 37677057 N NA NA CDC42EP3 IMR90 Hi-C 24141950 C2orf56 217741 533 chr2 37683281 37685194 37683796 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 214132 534 chr2 37933292 37934620 37933979 N NA CDC42EP3 CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 33966 535 chr2 37960926 37963543 37962266 N NA NA CDC42EP3 IMR90 Hi-C 24141950 CDC42EP3 61600 536 chr2 38049362 38053560 38050300,38053002 N,N NA;NA NA CDC42EP3,LOC100505876,QPCT IMR90 Hi-C 24141950 CDC42EP3 150036 537 chr2 38082084 38083729 38082569 N NA NA CDC42EP3,QPCT IMR90 Hi-C 24141950 CDC42EP3 182758 538 chr2 38119130 38120681 38119783 N NA NA CDC42EP3,QPCT,PRKD3,FAM82A1 IMR90 Hi-C 24141950 CDC42EP3 219804 539 chr2 38151951 38153220 38152582 N NA NA CDC42EP3,PRKG2,CYP1B1-AS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,19890323 CDC42EP3 252625 540 chr2 38880423 38882637 38881332 N NA GALM GALM,HNRPLL IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 GALM 10415 541 chr2 39350160 39352335 39351509 N NA SOS1 NA NA NA NA SOS1 2556 542 chr2 41962163 41964908 41963839 N NA NA NA NA NA NA EML4 431582 543 chr2 43187155 43190570 43189378 N NA NA ZFP36L2,LOC100129726,THADA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 263175 544 chr2 43359224 43360894 43360052 Y NA NA THADA,LOC100129726,ZFP36L2 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 92851 545 chr2 43385267 43386986 43385966 Y OXER1,ZFP36L2 NA THADA,LOC100129726,ZFP36L2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZFP36L2 66759 546 chr2 44317310 44319580 44318447 N NA NA PPM1B,PREPL,SLC3A1 IMR90 Hi-C 24141950 PPM1B 76420 547 chr2 45361406 45362884 45362089 N NA NA SIX2,SRBD1,UNQ6975 IMR90 Hi-C 24141950 SRBD1 475549 548 chr2 46761037 46762734 46762058 N NA ATP6V1E2,RHOQ PIGF,CRIPT,RHOQ IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RHOQ 7133 549 chr2 48372293 48375246 48373313 Y FOXN2 NA FOXN2,PPP1R21 IMR90 Hi-C 24141950 FOXN2 166549 550 chr2 54656427 54657942 54657141 N NA SPTBN1 ACYP2,SPTBN1 IMR90 Hi-C 24141950 SPTBN1 25512 551 chr2 55338013 55341657 55339545 N NA NA C2orf63,RTN4,EML6 IMR90 Hi-C 24141950 RTN4 60279 552 chr2 55360389 55362254 55360971 Y SMEK2,CCDC88A,RTN4 NA RTN4,C2orf63,EML6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 RTN4 82655 553 chr2 60316850 60334731 60327422,60332314 Y,Y NA;NA NA NA NA NA NA BCL11A 445902 554 chr2 61990175 61992513 61991557 Y NA NA XPO1,FAM161A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 FAM161A 88765 555 chr2 64957358 64959571 64958455 N NA NA SERTAD2,AFTPH,LOC339807 IMR90 Hi-C 24141950 SERTAD2 76312 556 chr2 64993721 64996112 64995371 Y SERTAD2 NA SERTAD2,LOC339807 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SERTAD2 112675 557 chr2 65057994 65059391 65058620 Y AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2 NA SERTAD2 IMR90 Hi-C 24141950 LOC400958 100190 558 chr2 65064734 65067760 65067176,65065390 Y,N SLC1A4,RAB1A;NA NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 LOC400958 91821 559 chr2 65079284 65080720 65080205 N NA NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 LOC400958 78861 560 chr2 65084835 65087922 65087203 Y AFTPH,SERTAD2,RAB1A,ACTR2 NA SERTAD2,LOC339807,AFTPH IMR90 Hi-C 24141950 LOC400958 71659 561 chr2 65172090 65175227 65173494 Y AFTPH,SERTAD2 LOC400958,SLC1A4 SERTAD2,AFTPH,LOC339807,LOC400958,SLC1A4,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 LOC400958 12509 562 chr2 65662177 65665322 65663654 N NA SPRED2 SPRED2,CEP68,ACTR2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SPRED2 2521 563 chr2 67094025 67096048 67094861 N NA NA MEIS1,LOC644838 IMR90 Hi-C 24141950 MEIS1 431493 564 chr2 67099325 67100562 67099928 N NA NA MEIS1,LOC644838 IMR90 Hi-C 24141950 MEIS1 436793 565 chr2 68646001 68647684 68647533 N NA FBXO48,APLF NA NA NA NA FBXO48 46706 566 chr2 68661350 68663833 68662245 N NA FBXO48,APLF NA NA NA NA FBXO48 30557 567 chr2 68664348 68667717 68665805 N NA FBXO48,APLF PPP3R1 K562 ChIA-PET 22265404 FBXO48 26673 568 chr2 68941694 68943467 68942379 N NA ARHGAP25 GKN2,FBXO48 IMR90 Hi-C 24141950 ARHGAP25 18446 569 chr2 69134701 69136735 69135731 Y NA NA ARHGAP25,APLF,FBXO48,BMP10 IMR90 Hi-C 24141950 ANTXR1 103541 570 chr2 71503105 71504414 71503822 N NA NA NA NA NA NA ZNF638 54471 571 chr2 74209579 74217428 74212566 N NA NA DGUOK,TET3,C2orf78,STAMBP,BOLA3,MOB1A,MTHFD2,BOLA3-AS1 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 DGUOK 55626 572 chr2 74412644 74413610 74413186 N NA BOLA3,MOB1A,MTHFD2 SLC4A5,MOB1A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 MOB1A 6649 573 chr2 75004316 75005479 75004778 N NA NA HK2 IMR90 Hi-C 24141950 HK2 54303 574 chr2 76641842 76643606 76643033 N NA NA NA NA NA NA GCFC2 703731 575 chr2 83277592 83280467 83279337 N NA NA NA NA NA NA SUCLG1 1406119 576 chr2 83308123 83310686 83309531 N NA NA NA NA NA NA SUCLG1 1375900 577 chr2 85115437 85117163 85116367 N NA C2orf89 TMSB10 MCF7 ChIA-PET 22265404 C2orf89 7185 578 chr2 85118315 85119492 85119083 N NA C2orf89 DNAH6,TMSB10 IMR90 Hi-C 24141950 C2orf89 10063 579 chr2 85121117 85123573 85121895 N NA C2orf89 DNAH6,TMSB10 IMR90 Hi-C 24141950 C2orf89 12865 580 chr2 85124980 85126193 85125730 N NA C2orf89 DNAH6,TMSB10,C2orf89,KCMF1 IMR90 Hi-C 24141950 C2orf89 16728 581 chr2 85166157 85167597 85166721 Y KCMF1,C2orf89 KCMF1 NA NA NA NA KCMF1 30634 582 chr2 85172299 85174636 85173461 Y TMSB10 KCMF1 KCMF1,TMSB10 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KCMF1 23595 583 chr2 85644808 85647477 85645741 N NA CAPG ELMOD3,GGCX,MAT2A MCF7 ChIA-PET 22265404 CAPG 3611 584 chr2 8617051 8630638 8628836 N NA NA LOC100506274,LINC00299,LOC339788 IMR90 Hi-C 24141950 LINC00299 148502 585 chr2 8654111 8656763 8655670 N NA NA LOC100506274,LINC00299,ID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ID2 165350 586 chr2 8672128 8687757 8675642,8680227,8684038,8686360 N,N,N,N NA;NA;NA;NA NA LOC100506274,LINC00299,ID2,LOC339788 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ID2 134356 587 chr2 8709987 8716118 8715324 N NA NA LINC00299,LOC100506274,ID2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ID2 105995 588 chr2 8784008 8785728 8784818 N NA ID2 ID2,LOC339788 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ID2 36385 589 chr2 89151851 89159296 89157910 N NA NA NA NA NA NA RPIA 160675 590 chr2 89162650 89166739 89165812 N NA NA NA NA NA NA RPIA 171474 591 chr2 89184802 89186448 89185376 N NA NA NA NA NA NA RPIA 193626 592 chr2 97192755 97194807 97193621 N NA ARID5A LOC285033,ITPRIPL1,NCAPH,SNRNP200,NEURL3,KANSL3,CNNM4,FER1L5 IMR90 Hi-C 24141950 ARID5A 7657 593 chr2 9820580 9822026 9821311 N NA YWHAQ YWHAQ,ADAM17 IMR90 Hi-C 24141950 YWHAQ 49474 594 chr2 9832147 9834213 9833068 N NA NA ADAM17,YWHAQ,KLF11 IMR90 Hi-C 24141950 YWHAQ 61041 595 chr2 99387827 99389083 99388551 N NA MGAT4A MGAT4A MCF7 ChIA-PET 22265404 MGAT4A 40238 596 chr2 9970043 9971858 9971061 N NA TAF1B GRHL1,TAF1B,HPCAL1,KLF11,RRM2,ADAM17,CYS1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TAF1B 11713 597 chr20 1781816 1785651 1784465 N NA NA SIRPA,LOC100289473,PDYN,STK35 IMR90 Hi-C 24141950 SIRPA 89162 598 chr20 20723936 20725178 20724271 Y RALGAPA2 RALGAPA2 RALGAPA2 IMR90 Hi-C 24141950 RALGAPA2 30670 599 chr20 21080530 21082808 21081659 N NA PLK1S1 PLK1S1,NKX2-2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PLK1S1 23816 600 chr20 23127338 23130158 23128692 N NA NA CD93,THBD K562 ChIA-PET 22265404 CD93 60361 601 chr20 23139660 23143572 23141336 N NA NA NA NA NA NA CD93 72683 602 chr20 24269913 24271639 24270965 N NA NA FLJ33581 IMR90 Hi-C 24141950 CST3 651339 603 chr20 24370122 24371383 24370542 N NA NA NA NA NA NA CST7 558483 604 chr20 2504892 2506485 2505783 N NA ZNF343 TMC2 IMR90 Hi-C 24141950 ZNF343 15114 605 chr20 31260327 31261951 31261327 N NA NA C20orf112,COMMD7,DNMT3B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 C20orf112 87452 606 chr20 34355727 34357697 34356223 Y SPAG4,CPNE1,RBM39,SCAND1,PHF20 RBM39,PHF20 NA NA NA NA PHF20 2226 607 chr20 39619499 39620830 39620266 Y MAFB,TOP1 TOP1 TOP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TOP1 36632 608 chr20 39944482 39947548 39946136 N NA ZHX3 ZHX3,IQGAP1,PLCG1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404,19890323 ZHX3 15743 609 chr20 39957356 39958877 39958379 Y NA ZHX3 PLCG1,ZHX3,LPIN3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZHX3 28617 610 chr20 40320940 40323512 40321742 N NA NA CHD6 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 CHD6 73807 611 chr20 4048270 4057014 4055791 N NA NA RNF24,PANK2,MAVS IMR90 Hi-C 24141950 RNF24 52054 612 chr20 4062945 4065253 4063487 N NA NA RNF24,PANK2,MAVS,MIR103B2,LOC728228 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RNF24 66729 613 chr20 4349914 4350941 4350428 N NA NA ADRA1D IMR90 Hi-C 24141950 PRNP 315856 614 chr20 45316899 45319173 45318324,45318255 N,N NA;NA SLC13A3 SLC13A3,SLC2A10,C20orf123,EYA2,NCOA3 IMR90 Hi-C 24141950 SLC13A3 3775 615 chr20 49099672 49101147 49100272 Y TMEM189,CEBPB,PTPN1 PTPN1 LOC284751,TMEM189-UBE2V1,MIR645,FAM65C,PTPN1,PARD6B,UBE2V1,SNAI1,CEBPB IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PTPN1 25744 616 chr20 5052975 5055136 5054212 Y PRNP,PRNP,RASSF2,SLC23A2 C20orf30 NA NA NA NA C20orf30 38597 617 chr20 5058327 5060293 5059078 N NA C20orf30,PCNA,CDS2 NA NA NA NA C20orf30 33440 618 chr20 52225488 52227281 52226424 N NA ZNF217 ZNF217,BCAS1 IMR90 Hi-C 24141950 ZNF217 25852 619 chr20 52258462 52261100 52259909 N NA NA SUMO1P1,BCAS1 IMR90 Hi-C 24141950 ZNF217 58826 620 chr20 52293483 52296748 52294749 Y NA NA BCAS1,SUMO1P1,BMP7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF217 93847 621 chr20 52355090 52358421 52356857 Y ZNF217 NA ZNF217,BCAS1 IMR90 Hi-C 24141950 SUMO1P1 133827 622 chr20 52366668 52369025 52367973 Y ZNF217 NA ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 123223 623 chr20 52445130 52447276 52446039 Y ZNF217 SUMO1P1 ZNF217,BCAS1,BMP7,SUMO1P1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SUMO1P1 44972 624 chr20 56026115 56027926 56027127 Y NA NA MIR5095 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 PPP4R1L 856569 625 chr20 5625371 5628083 5626372 Y TRMT6,GPCPD1 GPCPD1 GPCPD1,C20orf196,TRMT6 IMR90 Hi-C 24141950 GPCPD1 33699 626 chr20 5639269 5640834 5640060 N NA GPCPD1 C20orf196,GPCPD1,TRMT6 IMR90 Hi-C 24141950 GPCPD1 47597 627 chr20 61199428 61201825 61200585 N NA NA RPS21,C20orf151,CABLES2,C20orf166,C20orf166-AS1,NTSR1,COL9A3,OGFR,C20orf20 IMR90 Hi-C 24141950 SLCO4A1 71972 628 chr20 6469358 6474412 6470537,6473316 N,N NA;NA NA NA NA NA NA BMP2 274333 629 chr20 6727216 6728334 6727841 N NA BMP2 NA NA NA NA BMP2 20411 630 chr21 15399135 15400138 15399692 N NA NA NA NA NA NA HSPA13 355371 631 chr21 16058589 16060174 16059415 N NA NA NA NA NA NA HSPA13 303080 632 chr21 34304684 34305563 34305150 N NA NA C21orf62,OLIG1,C21orf54,IFNGR2 IMR90,H1ESC Hi-C,5C 24141950,22955621 OLIG1 136887 633 chr21 34587205 34589041 34588058 Y NA IFNAR2,IL10RB IFNAR2,IL10RB,LOC100288432,TMEM50B,IFNGR2 IMR90,GM12878 Hi-C,5C 24141950,22955621 IFNAR2 13190 634 chr21 34754592 34756304 34755658 Y IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2 IFNGR2 IFNGR2 MCF7 ChIA-PET 22265404 IFNGR2 18898 635 chr21 36770687 36772331 36771405 N NA NA CLIC6,RUNX1,LINC00160,MIR802 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RUNX1 349092 636 chr21 36900214 36902130 36901236 N NA NA RUNX1,LOC100506385 IMR90 Hi-C 24141950 RUNX1 478619 637 chr21 37376077 37379185 37377669 N NA NA CLIC6,KCNE1,LOC100506385,RCAN1,RUNX1,LINC00160 IMR90 Hi-C 24141950 SETD4 53634 638 chr21 38729871 38731530 38730904 Y NA DYRK1A DSCR3,DYRK1A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 8329 639 chr21 38931958 38937759 38936317 Y TTC3,DYRK1A,DYRK1A NA DSCR3,DSCR9,DYRK1A,KCNJ6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DYRK1A 192099 640 chr21 40297475 40298900 40298069 N NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 ETS2 120244 641 chr21 40356268 40358581 40357474 N NA NA ETS2,WRB,LINC00114 IMR90,HELA Hi-C,5C 24141950,22955621 ETS2 179037 642 chr21 40375526 40379237 40377035 Y NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 176203 643 chr21 40383564 40385782 40384467 N NA NA ETS2,LINC00114 IMR90 Hi-C 24141950 PSMG1 169658 644 chr21 46969551 46971546 46970798 N NA SLC19A1 SLC19A1,LOC100129027,PCBP3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLC19A1 7166 645 chr21 48041504 48042910 48042362 Y DIP2A,PRMT2 PRMT2 DIP2A,PCNT,S100B,PRMT2 IMR90 Hi-C 24141950 PRMT2 12597 646 chr22 17699395 17701141 17700311 N NA CECR1 NA NA NA NA CECR1 8616 647 chr22 19564157 19565414 19564653 N NA NA HIRA,CLDN5,LOC150185,CLTCL1,UFD1L IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC45 96743 648 chr22 28064158 28067852 28065530,28066731 Y,N PITPNB,MN1;NA NA MN1,MIAT IMR90 Hi-C 24141950 PITPNB 247403 649 chr22 29597147 29599458 29598348 N NA EMID1 NA NA NA NA EMID1 2495 650 chr22 35876377 35877714 35876912 N NA NA RBFOX2,MCM5,RASD2,APOL6 IMR90 Hi-C 24141950 RASD2 59638 651 chr22 41047097 41048861 41047810 Y NA MKL1 ST13,MKL1,MCHR1,ADSL,SLC25A17,DNAJB7,XPNPEP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MKL1 14407 652 chr22 41417467 41419155 41418763 Y MKL1,EP300 NA ST13,RBX1,MIR1281,EP300 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 EP300 69459 653 chr22 42833378 42834834 42834192 N NA NFAM1 WBP2NL,TCF20,LOC388906,SERHL,MEI1 IMR90 Hi-C 24141950 NFAM1 4977 654 chr22 42839448 42843166 42840603 Y SEPT3 NFAM1 MEI1,TCF20,NDUFA6,LOC100132273,C22orf32,CYP2D6,NFAM1,WBP2NL,RNU12,POLDIP3,FAM109B,NAGA IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NFAM1 11047 655 chr22 45059404 45060767 45060370 N NA NA PNPLA3,PARVB,SAMM50,KIAA1644,LINC00229 IMR90 Hi-C 24141950 LDOC1L 165399 656 chr22 46391855 46393196 46392541 Y C22orf26 LOC730668 C22orf40,PKDREJ,ATXN10,GTSE1,CN5H6.4,TRMU IMR90 Hi-C 24141950 LOC730668 9300 657 chr22 46988567 46993490 46989479 Y TBC1D22A,CERK,GRAMD4 GRAMD4 GRAMD4,CELSR1 IMR90 Hi-C 24141950 GRAMD4 29168 658 chr22 46999578 47001693 47000136 N NA GRAMD4 CELSR1,GRAMD4 IMR90 Hi-C 24141950 GRAMD4 20965 659 chr22 49854277 49857762 49856763 N NA NA NA NA NA NA C22orf34 193428 660 chr3 107842902 107845115 107844064 N NA CD47 CD47,IFT57,MYH15 IMR90 Hi-C 24141950 CD47 32967 661 chr3 111392694 111394464 111393422 N NA NA CD96,PHLDB2 IMR90 Hi-C 24141950 CD96 131768 662 chr3 12503151 12505198 12504101 N NA TSEN2 PPARG,SYN2,TIMP4 IMR90 Hi-C 24141950 TSEN2 20733 663 chr3 12512007 12514381 12512977 Y PPARG,PPARG TSEN2 PPARG,TSEN2,SYN2,TIMP4 IMR90 Hi-C 24141950 TSEN2 11550 664 chr3 126932176 126949444 126935752,126939556,126943061,126945780,126947880 N,Y,N,Y,N NA;NA;NA;MCM2;NA NA NUP210P1,CHCHD6 IMR90 Hi-C 24141950 PLXNA1 224739 665 chr3 129672396 129674525 129673647 N NA NA TRH,TMCC1,LOC100507032,IFT122 IMR90 Hi-C 24141950 LOC100507032 59682 666 chr3 13230113 13232291 13231459 Y NA NA LOC285375 IMR90 Hi-C 24141950 NUP210 229518 667 chr3 137854931 137857263 137855955 N NA DBR1,ARMC8 NA NA NA NA DBR1 36528 668 chr3 138552531 138554377 138553774 N NA NA PIK3CB IMR90 Hi-C 24141950 MRPS22 508484 669 chr3 147743178 147744449 147743880 N NA NA NA NA NA NA GYG1 964746 670 chr3 150102434 150104398 150103118 N NA TSC22D2 PFN2,RNF13,TSC22D2,SERP1,EIF2A IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TSC22D2 22390 671 chr3 151296554 151300086 151298664 N NA NA NA NA NA NA IGSF10 120057 672 chr3 151934768 151938225 151936157 N NA MBNL1,LOC401093 MBNL1 IMR90 Hi-C 24141950 MBNL1 47604 673 chr3 152938739 152940272 152939762 N NA NA RAP2B IMR90 Hi-C 24141950 RAP2B 58710 674 chr3 156322828 156325001 156323667 N NA SSR3 TIPARP-AS1,TIPARP,CCNL1,SSR3,LOC339894,LOC100498859 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 SSR3 49855 675 chr3 156891793 156895026 156892907 N NA CCNL1 CCNL1,VEPH1,PTX3,LEKR1,LOC339894,LOC100498859 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCNL1 13311 676 chr3 159639587 159641575 159640666 N NA NA IQCJ-SCHIP1,IL12A,IFT80,SMC4 IMR90 Hi-C 24141950 IL12A 65048 677 chr3 159851387 159856012 159853993 N NA NA IFT80,SMC4 IMR90 Hi-C 24141950 C3orf80 87411 678 chr3 159900912 159905080 159902647 Y NA C3orf80 C3orf80 IMR90 Hi-C 24141950 C3orf80 38343 679 chr3 171649538 171650862 171650125 N NA NA PLD1,TMEM212,FNDC3B IMR90 Hi-C 24141950 FNDC3B 106556 680 chr3 171684490 171685772 171685336 N NA NA PLD1,FNDC3B,TMEM212 IMR90 Hi-C 24141950 FNDC3B 71646 681 chr3 177050857 177052390 177051763 N NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 135809 682 chr3 177074764 177080159 177076765,177079027 Y,N TBL1XR1;NA NA TBL1XR1 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 159716 683 chr3 177144564 177145665 177145054 Y NA NA TBL1XR1 IMR90 Hi-C 24141950 TBL1XR1 229516 684 chr3 177314852 177316897 177315534 N NA NA TBL1XR1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1XR1 399804 685 chr3 177661258 177663110 177662177 N NA NA NA NA NA NA TBL1XR1 746210 686 chr3 17942292 17945931 17943700 N NA NA NA NA NA NA LOC339862 109216 687 chr3 17988341 17991956 17990765 Y NA NA NA NA NA NA LOC339862 63191 688 chr3 18020075 18026798 18022783 Y TBC1D5,TBC1D5 LOC339862 NA NA NA NA LOC339862 28349 689 chr3 184394502 184395445 184394924 N NA MAGEF1 EPHB3 IMR90 Hi-C 24141950 MAGEF1 34391 690 chr3 184405048 184406031 184405599 N NA MAGEF1 NA NA NA NA MAGEF1 23805 691 chr3 185278980 185280146 185279648 N NA SENP2 LIPH,TMEM41A IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SENP2 23885 692 chr3 187490541 187493162 187491541 N NA BCL6 BCL6,LPP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BCL6 27028 693 chr3 187494671 187496081 187495110 N NA BCL6 BCL6,LPP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BCL6 31158 694 chr3 188691967 188694215 188692788,188693343 N,N NA;NA NA LOC100131635,RTP2,LPP,BCL6 IMR90 Hi-C 24141950 LPP-AS2 820091 695 chr3 193787909 193789652 193788644,193788418 N,N NA;NA NA HES1,LOC647323,LOC100131551 MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 HES1 64279 696 chr3 193972906 193974341 193973479 N NA NA LOC647323,LOC100131551,HES1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HES1 118975 697 chr3 194760373 194761500 194761048 N NA NA XXYLT1,LOC100507391 IMR90 Hi-C 24141950 XXYLT1 230395 698 chr3 195822385 195824916 195823573 N NA TFRC LOC401109,TFRC,PCYT1A,LRRC33 IMR90 Hi-C 24141950 TFRC 13353 699 chr3 195846128 195848788 195847555 N NA TFRC TFRC,LRRC33,LOC401109,C3orf43,MIR570,MUC20,SDHAP2,PCYT1A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TFRC 37096 700 chr3 196338301 196339944 196339126 Y LRRC33 WDR53,FBXO45,LRRC33 PCYT1A,TCTEX1D2,FBXO45,WDR53,CEP19,PIGX,LRRC33,PAK2,MFI2,MFI2-AS1,SENP5 IMR90 Hi-C 24141950 LRRC33 26712 701 chr3 196350306 196352397 196351854 N NA LRRC33 WDR53,FBXO45,SENP5,UBXN7,LRRC33,C3orf43,PAK2 IMR90 Hi-C 24141950 LRRC33 14259 702 chr3 196358230 196361132 196359544 N NA LRRC33 FBXO45,SENP5,C3orf43,PAK2,LRRC33,CEP19 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LRRC33 5524 703 chr3 197182598 197183923 197183413 N NA NA BDH1,DLG1,LOC100507086 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DLG1 157151 704 chr3 23700321 23701841 23701285 N NA NA UBE2E2,UBE2E1 IMR90 Hi-C 24141950 UBE2E1 145543 705 chr3 25046565 25047782 25047158 N NA NA RARB IMR90 Hi-C 24141950 TOP2B 658006 706 chr3 27524221 27526616 27526030,27524713 N,Y NA;NA SLC4A7 NEK10,SLC4A7 IMR90 Hi-C 24141950 SLC4A7 25976 707 chr3 27673842 27675197 27674459 N NA NA SLC4A7,NEK10 IMR90 Hi-C 24141950 SLC4A7 175597 708 chr3 31266398 31270504 31268916 Y NA NA GADL1 IMR90 Hi-C 24141950 STT3B 303987 709 chr3 31271583 31275255 31274169 N NA NA NA NA NA NA STT3B 299236 710 chr3 31562665 31564245 31563512 N NA STT3B GADL1 IMR90 Hi-C 24141950 STT3B 10246 711 chr3 33832163 33833754 33833460 Y CLASP2,PDCD6IP PDCD6IP CLASP2,CRTAP IMR90 Hi-C 24141950 PDCD6IP 6309 712 chr3 40892828 40893930 40893593 N NA NA NA NA NA NA ZNF621 326452 713 chr3 41011864 41014169 41013207 N NA NA ULK4,CTNNB1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CTNNB1 226773 714 chr3 41157744 41160012 41159100 Y NA NA ULK4 IMR90 Hi-C 24141950 CTNNB1 80930 715 chr3 42053313 42058963 42055666 N NA NA TRAK1,ULK4 IMR90 Hi-C 24141950 TRAK1 73783 716 chr3 43220962 43222359 43221747 Y CCDC13,SNRK NA SNRK,ANO10,FAM198A,ABHD5 IMR90 Hi-C 24141950 C3orf39 73397 717 chr3 44551809 44552681 44552160 N NA ZNF445 ZNF445 K562 ChIA-PET 22265404 ZNF445 32647 718 chr3 57936799 57938191 57937465 N NA NA NA NA NA NA FLNB 55936 719 chr3 64033420 64033826 64033676 Y NA LOC100507062,PSMD6 PRICKLE2,LOC100652759,LOC100287879 IMR90 Hi-C 24141950 PSMD6 24300 720 chr3 64340007 64341863 64341257 N NA NA PRICKLE2,LOC100652759,LOC100287879,PSMD6 IMR90 Hi-C 24141950 PSMD6 330887 721 chr3 72357900 72361276 72359896 Y RYBP NA SHQ1,RYBP IMR90 Hi-C 24141950 RYBP 134498 722 chr3 72571708 72573228 72572726 N NA NA EIF4E3,RYBP,SHQ1 IMR90 Hi-C 24141950 RYBP 75934 723 chr3 73143151 73144600 73143612 N NA NA PDZRN3 IMR90 Hi-C 24141950 PPP4R2 97032 724 chr3 73159595 73160725 73159855 Y EBLN2 NA PDZRN3,CACNA1D IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PPP4R2 113476 725 chr3 97540040 97541834 97540762 N NA NA GABRR3,CPOX IMR90 Hi-C 24141950 MINA 149461 726 chr3 97629323 97630853 97630014 N NA NA NA NA NA NA MINA 60442 727 chr4 10704964 10707284 10706313 N NA CLNK CLNK,HS3ST1 IMR90 Hi-C 24141950 CLNK 18578 728 chr4 11481792 11483689 11482531 N NA NA CLNK IMR90 Hi-C 24141950 CLNK 795406 729 chr4 119512040 119513703 119512805 N NA NA NA NA NA NA METTL14 92871 730 chr4 124364131 124366245 124365228 N NA SPRY1 SPATA5 IMR90 Hi-C 24141950 SPRY1 46175 731 chr4 141157863 141160334 141159311 N NA NA MAML3,MGST2,SCOC,LOC100129858 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAML3 82630 732 chr4 141163933 141165545 141164728 N NA NA MAML3,SCOC,LOC100129858,MGST2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MAML3 88700 733 chr4 15757097 15759302 15758525 N NA CD38 C1QTNF7,CD38,FGFBP2,PROM1,CC2D2A IMR90 Hi-C 24141950 CD38 20629 734 chr4 1580255 1582416 1581826 N NA NA RNF212,TMED11P,KIAA1530,FAM53A,SLBP,CTBP1,C4orf42 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SLBP 131614 735 chr4 169407618 169409669 169408324 Y DDX60,DDX60L DDX60L DDX60,DDX60L,PALLD IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DDX60L 5980 736 chr4 180756901 180758135 180757715 N NA NA NA NA NA NA AGA 2393244 737 chr4 184318989 184321077 184319727 N NA CDKN2AIP WWC2,CLDN22,CDKN2AIP IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIP 44712 738 chr4 185186710 185187738 185187178 Y IRF2,CASP3 NA IRF2,CASP3,LOC728175,CCDC111 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC728175 87392 739 chr4 185188835 185189791 185189233 Y IRF2,CASP3 NA IRF2,CASP3,LOC728175,CCDC111,MLF1IP IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC728175 85339 740 chr4 185434401 185436378 185435676 N NA IRF2 LOC728175,IRF2,CCDC111,CASP3 IMR90 Hi-C 24141950 IRF2 38675 741 chr4 185457285 185459656 185458751 N NA NA IRF2 MCF7,K562 ChIA-PET 22265404 IRF2 61559 742 chr4 187686288 187687283 187686805 N NA NA LOC339975 IMR90 Hi-C 24141950 CYP4V2 573614 743 chr4 187765175 187767338 187766553 N NA NA FAT1,LOC339975 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CYP4V2 652501 744 chr4 187855203 187856567 187855644 N NA NA LOC339975,FAT1 IMR90 Hi-C 24141950 CYP4V2 742529 745 chr4 187863893 187865384 187864614 N NA NA LOC339975,FAT1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CYP4V2 751219 746 chr4 190578431 190581063 190580133 N NA NA NA NA NA NA FRG1 280911 747 chr4 24468366 24474097 24472430 N NA NA CCDC149,PPARGC1A,DHX15,SOD3,PI4K2B,ANAPC4,LGI2,SEPSECS IMR90 Hi-C 24141950 DHX15 112087 748 chr4 26219571 26220715 26220264 Y RBPJ,RBPJ NA RBPJ,STIM2 IMR90 Hi-C 24141950 RBPJ 100617 749 chr4 26274173 26275992 26275368 Y RBPJ,RBPJ RBPJ NA NA NA NA RBPJ 45340 750 chr4 26289260 26290747 26290136 Y RBPJ,RBPJ RBPJ RBPJ IMR90 Hi-C 24141950 RBPJ 30585 751 chr4 26858823 26860027 26859264 N NA STIM2 NA NA NA NA STIM2 2286 752 chr4 27227 29933 29187 N NA NA ZNF718 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PIGG 463056 753 chr4 3289094 3294442 3293786 N NA RGS12 RGS12 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RGS12 21432 754 chr4 36257783 36258891 36258250 N NA ARAP2 ARAP2 MCF7 ChIA-PET 22265404 ARAP2 11804 755 chr4 37755504 37757043 37756389 N NA NA RELL1 IMR90 Hi-C 24141950 RELL1 67505 756 chr4 38319878 38321360 38320779 Y NA NA FLJ13197,KLF3,TBC1D1,TLR10 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF3 344430 757 chr4 40194044 40196082 40194871 N NA RHOH NA NA NA NA RHOH 2445 758 chr4 40674163 40675808 40674812 N NA RBM47 RBM47 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM47 42280 759 chr4 54568337 54569743 54569030 Y CHIC2 NA SCFD2,LNX1,PDGFRA,FIP1L1,RPL21P44,CHIC2 IMR90 Hi-C 24141950 RPL21P44 283706 760 chr4 55645032 55647096 55646481 N NA NA KIT IMR90 Hi-C 24141950 SRD5A3 565292 761 chr4 55683288 55686615 55685527 N NA NA NA NA NA NA SRD5A3 525773 762 chr4 57623363 57625012 57624176 N NA NA PAICS,HOPX,THEGL IMR90 Hi-C 24141950 REST 149030 763 chr4 6778333 6780584 6779254 N NA KIAA0232 CNO K562 ChIA-PET 22265404 KIAA0232 3875 764 chr4 74569883 74571780 74570444 Y ANKRD17,MTHFD2L,IL8,CXCL3,CXCL2 IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 34443 765 chr4 74572837 74576488 74573943 N NA IL8 MTHFD2L IMR90 Hi-C 24141950 IL8 29735 766 chr4 80999430 81001459 81000868 N NA ANTXR2 ANTXR2 K562 ChIA-PET 22265404 ANTXR2 4953 767 chr4 81045647 81047917 81046608 N NA NA PAQR3,ANTXR2,PRDM8,FGF5 IMR90 Hi-C 24141950 ANTXR2 51170 768 chr4 96492252 96494542 96493475 N NA UNC5C NA NA NA NA UNC5C 21891 769 chr5 102089787 102092285 102091344 N NA NA NA NA NA NA PAM 109242 770 chr5 114892863 114894178 114893298 N NA FEM1C FEM1C MCF7 ChIA-PET 22265404 FEM1C 12272 771 chr5 122765370 122766557 122765862 Y NA CEP120 CEP120 MCF7,K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CEP120 6084 772 chr5 124287021 124289141 124287849 N NA NA NA NA NA NA CSNK1G3 1439228 773 chr5 124297019 124300643 124299073 N NA NA NA NA NA NA CSNK1G3 1449226 774 chr5 124340502 124343076 124341612 N NA NA NA NA NA NA CSNK1G3 1492709 775 chr5 126015214 126016969 126016137 Y LMNB1,LMNB1 NA LMNB1,MEGF10 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 PHAX 78607 776 chr5 126093563 126095098 126094317 Y LMNB1,LMNB1 LMNB1 LMNB1 K562,MCF7 ChIA-PET 22265404 LMNB1 17217 777 chr5 130587148 130594747 130588693 N NA CDC42SE2 CDC42SE2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CDC42SE2 4955 778 chr5 133772042 133773882 133772893 N NA CDKN2AIPNL SKP1,CDKL3,UBE2B,CDKN2AIPNL,SAR1B,PHF15,SEC24A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 24444 779 chr5 133801015 133803418 133802099 N NA NA PHF15,SKP1,CDKN2AIPNL,UBE2B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CDKN2AIPNL 53417 780 chr5 134758517 134759639 134759319 N NA H2AFY NA NA NA NA H2AFY 22940 781 chr5 136899473 136900781 136899858 N NA NA TRPC7 IMR90 Hi-C 24141950 SPOCK1 64455 782 chr5 138077141 138078828 138078206 Y NA CTNNA1 CTNNA1,SIL1,HSPA9,MATR3 IMR90 Hi-C 24141950 CTNNA1 10279 783 chr5 138581683 138583839 138582288 N NA SIL1,MATR3 SIL1,CTNNA1,LRRTM2,HSPA9,MATR3 IMR90 Hi-C 24141950 MATR3 25602 784 chr5 138872043 138873144 138872643 N NA TMEM173 DNAJC18,SPATA24,UBE2D2,SLC23A1 IMR90 Hi-C 24141950 TMEM173 9700 785 chr5 138897171 138898311 138897684 Y MATR3,MATR3,DNAJC18,PSD2 TMEM173,UBE2D2 DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 TMEM173 34828 786 chr5 139486524 139488179 139487344 N NA PURA,IGIP NRG2,CYSTM1 IMR90 Hi-C 24141950 PURA 5529 787 chr5 141805286 141806715 141805888 N NA NA SPRY4,FGF1,NDFIP1,GNPDA1,RNF14 IMR90 Hi-C 24141950 SPRY4 100666 788 chr5 14559587 14561528 14560442 N NA FAM105A TRIO,FAM105A IMR90 Hi-C 24141950 FAM105A 20363 789 chr5 148173121 148175768 148174538 N NA ADRB2 SH3TC2,ADRB2,AFAP1L1,ABLIM3 IMR90 Hi-C 24141950 ADRB2 30388 790 chr5 148183679 148189828 148185247,148188796 N,Y NA;FBXO38,ADRB2 ADRB2 SH3TC2,ABLIM3 IMR90 Hi-C 24141950 ADRB2 16328 791 chr5 149866930 149872915 149868281 N NA RPS14,NDST1 NDST1,RBM22,MYOZ3,SYNPO,RPS14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NDST1 14759 792 chr5 154682344 154683813 154682816 N NA NA PPP1R2P3 IMR90 Hi-C 24141950 MRPL22 361711 793 chr5 172215955 172216995 172216301 Y C5orf41,DUSP1 DUSP1,ERGIC1 ERGIC1,DUSP1,LOC100268168,RPL26L1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP1 17752 794 chr5 172822948 172825864 172824081 N NA NA LOC285593,BOD1,STC2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BOD1 217802 795 chr5 173202094 173203818 173203079 N NA NA CPEB4 IMR90 Hi-C 24141950 CPEB4 111513 796 chr5 173292629 173294952 173293787 Y CPEB4 CPEB4 CPEB4 IMR90 Hi-C 24141950 CPEB4 20379 797 chr5 17435802 17437974 17436666 N NA NA LOC401177 IMR90 Hi-C 24141950 BASP1 218052 798 chr5 179340678 179341728 179341310 N NA TBC1D9B TBC1D9B,RNF130 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 TBC1D9B 5822 799 chr5 180299929 180301501 180301046 Y MGAT1,MGAT1,BTNL8 LOC729678,LOC100859930,ZFP62 MGAT1,LOC729678,LOC100859930,BTNL9,BTNL8 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 ZFP62 11643 800 chr5 18744111 18746416 18745760 N NA NA NA NA NA NA BASP1 1526361 801 chr5 33362142 33368177 33363172,33367563,33364722 N,N,N NA;NA;NA NA NPR3 IMR90 Hi-C 24141950 TARS 72721 802 chr5 33369699 33371021 33370415 N NA NA NPR3,LOC340113 IMR90 Hi-C 24141950 TARS 69877 803 chr5 36372608 36374541 36373694 N NA NA NA NA NA NA NADKD1 130350 804 chr5 36723815 36726172 36724665 N NA NA NIPBL,LOC646719 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 SLC1A3 117358 805 chr5 40401566 40402610 40402249 N NA NA PTGER4 IMR90 Hi-C 24141950 PTGER4 277422 806 chr5 40403716 40407893 40407069,40405693 Y,Y PTGER4,CARD6;PTGER4,CARD6 NA PTGER4 IMR90 Hi-C 24141950 PTGER4 272139 807 chr5 40409542 40411255 40410272 Y PTGER4,PRKAA1 NA PTGER4 IMR90 Hi-C 24141950 PTGER4 268777 808 chr5 40483626 40486491 40484811 N NA NA PTGER4 IMR90 Hi-C 24141950 PTGER4 193541 809 chr5 40513826 40517202 40515542 N NA NA PTGER4 IMR90 Hi-C 24141950 PTGER4 162830 810 chr5 40652084 40653621 40652722 N NA PTGER4 NA NA NA NA PTGER4 26411 811 chr5 42947164 42962002 42952063 N NA NA LOC648987,LOC153684 IMR90 Hi-C 24141950 LOC648987 56911 812 chr5 43104046 43107066 43105261 N NA LOC100132356,ZNF131 LOC153684,LOC100132356,ZNF131 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 ZNF131 14576 813 chr5 53075055 53075939 53075584 N NA NA FST,ARL15,NDUFS4 IMR90 Hi-C 24141950 NDUFS4 218590 814 chr5 53941783 53943243 53942516 N NA NA SNX18,HSPB3 IMR90 Hi-C 24141950 SNX18 128194 815 chr5 54895630 54897370 54896829 Y NA NA NA NA NA NA SLC38A9 110793 816 chr5 55709076 55711861 55711335 Y MAP3K1 NA MAP3K1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 SETD9 493226 817 chr5 56031042 56033805 56032608 N NA NA MAP3K1 MCF7 ChIA-PET 22265404 SETD9 171282 818 chr5 56740487 56742137 56741352 N NA NA PLK2,ACTBL2 IMR90 Hi-C 24141950 GPBP1 270712 819 chr5 56746966 56749184 56747643 N NA NA ACTBL2,PLK2 IMR90 Hi-C 24141950 GPBP1 277191 820 chr5 56789833 56791559 56790642 Y NA NA ACTBL2,PLK2 IMR90 Hi-C 24141950 GPBP1 320058 821 chr5 60570992 60572582 60571870 Y ZSWIM6 NA NDUFAF2 IMR90 Hi-C 24141950 ZSWIM6 55518 822 chr5 62026398 62027747 62027048 N NA NA NA NA NA NA IPO11 317825 823 chr5 67673267 67675350 67674218 N NA NA NA NA NA NA PIK3R1 161683 824 chr5 67729518 67730742 67730185 N NA NA NA NA NA NA PIK3R1 217934 825 chr5 73729086 73730406 73729424 Y NA NA RGNEF,ENC1 IMR90 Hi-C 24141950 HEXB 250563 826 chr5 77231335 77234527 77231858,77233719 N,N NA;NA NA OTP IMR90 Hi-C 24141950 TBCA 159150 827 chr5 81074136 81076336 81075139 N NA SSBP2 SSBP2,ZCCHC9,ATG10 IMR90 Hi-C 24141950 SSBP2 27064 828 chr5 81146640 81149278 81147867 Y NA NA ATG10,SSBP2,ACOT12 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 SSBP2 99568 829 chr5 81652285 81654688 81653275 Y RPS23 NA ATP6AP1L,XRCC4,VCAN IMR90 Hi-C 24141950 ATP6AP1L 51119 830 chr5 83139512 83141742 83140556 Y NA NA NA NA NA NA XRCC4 766195 831 chr5 86315287 86317274 86316120 Y NA NA NA NA NA NA RASA1 246796 832 chr5 87797549 87799288 87798568 N NA NA NA NA NA NA LOC100505894 232850 833 chr5 88563661 88565129 88564170 N NA NA NA NA NA NA LOC100505894 998962 834 chr5 90575745 90577258 90576485 N NA NA ARRDC3,LOC100129716,GPR98 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100129716 98906 835 chr5 95170004 95172293 95171201 N NA GLRX RHOBTB3,GLRX,ARSK,RFESD,SPATA9 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 GLRX 11427 836 chr6 106048832 106050080 106049649 Y PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PREP 197833 837 chr6 106233070 106234609 106233943 N NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PRDM1 299586 838 chr6 106257258 106259585 106258522 Y NA NA ATG5,PRDM1 IMR90 Hi-C 24141950 PRDM1 274610 839 chr6 106323831 106324847 106324190 N NA NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 209348 840 chr6 106439436 106444435 106441748,106440516 N,Y NA;PRDM1 NA PRDM1,ATG5 IMR90 Hi-C 24141950 PRDM1 89760 841 chr6 106588870 106590868 106589835 Y NA NA ATG5,PRDM1,LIN28B IMR90 Hi-C 24141950 PRDM1 54675 842 chr6 106895228 106897501 106896061 N NA NA AIM1,RTN4IP1,QRSL1 IMR90 Hi-C 24141950 AIM1 62229 843 chr6 109557089 109560138 109558451 N NA NA CD164,CCDC162P K562 ChIA-PET 22265404 CCDC162P 55368 844 chr6 111179545 111181204 111180729 Y CDK19,SLC16A10,AMD1,AMD1 CDK19,AMD1 CDK19,AMD1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 AMD1 14783 845 chr6 119255135 119257207 119256033 N NA ASF1A,MCM9 NA NA NA NA MCM9 2232 846 chr6 12007766 12010335 12008992 N NA HIVEP1 EDN1,ADTRP,HIVEP1 IMR90 Hi-C 24141950 HIVEP1 2389 847 chr6 125765141 125766513 125765756 N NA NA NA NA NA NA HDDC2 141859 848 chr6 130069199 130070575 130069760 Y NA ARHGAP18 ARHGAP18,L3MBTL3 IMR90 Hi-C 24141950 ARHGAP18 37829 849 chr6 132406132 132408811 132406635 N NA NA CTGF,LOC100507254,ENPP1 H1ESC,IMR90,K562 5C,Hi-C 22955621,24141950 STX7 425526 850 chr6 134672164 134674233 134673036 N NA NA SGK1,ALDH8A1,LOC154092 IMR90 Hi-C 24141950 HBS1L 701803 851 chr6 134736993 134738869 134738151 N NA NA SGK1,LOC154092,ALDH8A1 IMR90 Hi-C 24141950 HBS1L 637167 852 chr6 135408559 135410853 135409608 N NA HBS1L AHI1,MYB IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HBS1L 32523 853 chr6 135449338 135451183 135450240 N NA NA AHI1,MYB IMR90 Hi-C 24141950 MYB 51270 854 chr6 137544023 137545914 137544749 N NA IFNGR1 NA NA NA NA IFNGR1 3456 855 chr6 138019718 138021191 138020537 Y IFNGR1,TNFAIP3 NA TNFAIP3,IFNGR1,PERP IMR90 Hi-C 24141950 TNFAIP3 167390 856 chr6 138075364 138077680 138076663 N NA NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 110901 857 chr6 138088911 138090390 138089635 Y TNFAIP3 NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 98191 858 chr6 138131755 138134087 138132700 Y TNFAIP3 NA TNFAIP3 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 54494 859 chr6 138136706 138138797 138137423 Y NA TNFAIP3 TNFAIP3,PERP IMR90 Hi-C 24141950 TNFAIP3 49784 860 chr6 138144138 138146495 138145326 N NA TNFAIP3 TNFAIP3,PERP IMR90 Hi-C 24141950 TNFAIP3 42086 861 chr6 138166854 138169118 138167952 Y TNFAIP3 TNFAIP3 TNFAIP3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TNFAIP3 19463 862 chr6 138225119 138226909 138225907 Y TNFAIP3 TNFAIP3 NA NA NA NA TNFAIP3 36538 863 chr6 138229429 138232821 138229997 N NA TNFAIP3 NA NA NA NA TNFAIP3 40848 864 chr6 138247737 138250242 138249371 N NA NA IFNGR1,TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 59156 865 chr6 138260956 138262879 138261543 Y OLIG3,TNFAIP3 NA TNFAIP3 IMR90 Hi-C 24141950 TNFAIP3 72375 866 chr6 138287858 138292189 138289373 Y TNFAIP3 NA NA NA NA NA TNFAIP3 99277 867 chr6 138294860 138298188 138296812 N NA NA NA NA NA NA TNFAIP3 106279 868 chr6 139643907 139645714 139644988 N NA TXLNB ECT2L,TXLNB,HECA IMR90 Hi-C 24141950 TXLNB 30699 869 chr6 139659023 139660956 139659687 N NA TXLNB,CITED2 ECT2L,TXLNB,HECA,CCDC28A IMR90 Hi-C 24141950 CITED2 34829 870 chr6 139946179 139947731 139946710 N NA NA CITED2 K562 ChIA-PET 22265404 CITED2 250394 871 chr6 140239996 140241966 140241250 N NA NA CITED2 IMR90 Hi-C 24141950 CITED2 544211 872 chr6 14209857 14210922 14210033 N NA NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CCDC90A 395065 873 chr6 14273441 14283231 14276460 N NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 CCDC90A 458649 874 chr6 14289784 14292792 14290474 N NA NA JARID2 IMR90 Hi-C 24141950 CCDC90A 474992 875 chr6 144535849 144538092 144536847 N NA NA STX11,SF3B5 MCF7,K562 ChIA-PET 22265404 STX11 64195 876 chr6 144604909 144609055 144607424 N NA UTRN UTRN IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 UTRN 3818 877 chr6 14646638 14658048 14655643 N NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 588479 878 chr6 14708810 14712770 14711612 Y NA NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 533757 879 chr6 14732439 14736412 14732983,14735253 Y,Y NA;NA NA DTNBP1,JARID2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 510115 880 chr6 14882345 14884286 14883204 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 362241 881 chr6 149003887 149004710 149004398 N NA NA UST,LOC100128176 IMR90 Hi-C 24141950 UST 63561 882 chr6 149021638 149022890 149022371 N NA UST LOC100128176,UST IMR90 Hi-C 24141950 UST 45381 883 chr6 14902488 14904905 14903676 N NA NA JARID2 IMR90 Hi-C 24141950 JARID2 341622 884 chr6 14920994 14924978 14922768 Y JARID2 NA JARID2,DTNBP1 IMR90 Hi-C 24141950 JARID2 321549 885 chr6 14966231 14968654 14967615 N NA NA NA NA NA NA JARID2 277873 886 chr6 15065637 15067723 15067130 Y NA NA JARID2,DTNBP1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 JARID2 178804 887 chr6 157007048 157009471 157008167 Y ARID1B NA MIR4466,ARID1B,NOX3 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ARID1B 89593 888 chr6 157039579 157042430 157040605 N NA NA ARID1B,MIR4466 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ARID1B 56634 889 chr6 158184891 158186176 158185574 Y SNX9 NA SNX9,TMEM242,ZDHHC14,SYNJ2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SYNJ2 216712 890 chr6 158652115 158654233 158653074 N NA NA TULP4,TMEM181,DYNLT1,SYTL3 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 GTF2H5 62736 891 chr6 15900948 15902323 15901474 N NA NA MYLIP K562 ChIA-PET 22265404 MYLIP 226994 892 chr6 159290135 159291545 159290916 N NA EZR OSTCP1,C6orf99,EZR K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZR 49679 893 chr6 159476177 159478714 159477260 Y TAGAP TAGAP TAGAP IMR90 Hi-C 24141950 TAGAP 9993 894 chr6 159482411 159484953 159483636 Y DYNLT1,SYTL3,TAGAP TAGAP NA NA NA NA TAGAP 16227 895 chr6 159525004 159526382 159525758 N NA NA TAGAP,RSPH3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TAGAP 58820 896 chr6 164132814 164134307 164133618 N NA NA NA NA NA NA QKI 297139 897 chr6 166657714 166658868 166658331 N NA NA NA NA NA NA SFT2D1 97123 898 chr6 166671769 166674169 166673154 Y SFT2D1 NA LOC100289495 IMR90 Hi-C 24141950 SFT2D1 81822 899 chr6 170363599 170364980 170364130 Y NA NA DLL1 IMR90 Hi-C 24141950 C6orf70 211878 900 chr6 170403123 170413768 170404115 N NA NA NA NA NA NA DLL1 185929 901 chr6 170452257 170453988 170452829 N NA NA DLL1,LINC00574 IMR90 Hi-C 24141950 DLL1 145709 902 chr6 170768496 170769569 170768825 N NA NA FAM120B,C6orf70,TCTE3,LINC00574,PHF10,PSMB1,LINC00242 IMR90 Hi-C 24141950 PSMB1 92848 903 chr6 20319405 20321020 20320145 N NA NA E2F3 IMR90 Hi-C 24141950 E2F3 81117 904 chr6 21586896 21589915 21588478 Y SOX4 SOX4 LINC00340,CDKAL1 MCF7 ChIA-PET 22265404 SOX4 4057 905 chr6 25034562 25037023 25036086 N NA NA FAM65B IMR90 Hi-C 24141950 CMAHP 101028 906 chr6 25042004 25044567 25043635 N NA NA FAM65B,CMAHP IMR90 Hi-C 24141950 CMAHP 93484 907 chr6 25049853 25052165 25050784 Y C6orf62 NA FAM65B,GMNN IMR90 Hi-C 24141950 CMAHP 85886 908 chr6 25055643 25057071 25056296 N NA NA FAM65B,GMNN IMR90 Hi-C 24141950 CMAHP 80980 909 chr6 25177838 25180676 25178767 N NA CMAHP CMAHP,FAM65B,LRRC16A IMR90 Hi-C 24141950 CMAHP 39787 910 chr6 26295536 26297019 26296282 N NA NA HIST1H2AG,HIST1H2BJ,HIST1H2BE,HIST1H4D,HIST1H2BD,HIST1H2AE,HIST1H2BF,HIST1H3D,HIST1H2BG,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4F,HIST1H4G,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A2,BTN2A1,LOC285819,BTN1A1,HMGN4,HCG11,HIST1H1D K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 BTN3A2 68379 911 chr6 26304454 26306033 26305506 N NA NA HCG11,HIST1H1D,HIST1H4F,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D,HIST1H4E,HIST1H3F,HIST1H2BH,HIST1H4G,HIST1H2BI,HIST1H3G,HIST1H4H,BTN3A2,BTN2A2,BTN1A1,HMGN4,BTN3A3,HIST1H2AH,HIST1H2BK,MIR3143,ABT1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 59365 912 chr6 26322044 26323628 26322838 Y NA BTN3A2 HIST1H1D,HIST1H4F,ABT1,HIST1H4G,HMGN4,HIST1H3F,HIST1H2BH,HIST1H2BI,HIST1H3G,HCG11,HIST1H4I,HIST1H2BK IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 BTN3A2 41770 913 chr6 27445864 27448262 27446945 Y NA ZNF184 ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 ZNF184 4967 914 chr6 27567219 27570493 27569340 N NA NA PRSS16 IMR90 Hi-C 24141950 LOC100507173 91321 915 chr6 28725748 28727131 28726248 N NA NA NA NA NA NA LOC401242 104323 916 chr6 28749128 28750293 28749690 N NA NA NA NA NA NA LOC401242 81161 917 chr6 30482489 30483691 30482753 N NA HLA-E,PRR3,GNL1 HLA-E,PPP1R10,MRPS18B,ABCF1 MCF7,K562 ChIA-PET 22265404 HLA-E 25306 918 chr6 3053093 3054497 3054073 N NA RIPK1 MYLK4,WRNIP1,DKFZP686I15217,NQO2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 RIPK1 22561 919 chr6 3063901 3070097 3068924 N NA RIPK1,BPHL NQO2,LOC100507194,WRNIP1 K562 ChIA-PET 22265404 RIPK1 6961 920 chr6 33870960 33873867 33872343 Y PHF1,ZBTB9,LEMD2 NA NA NA NA NA LEMD2 114054 921 chr6 34149727 34151429 34150713 Y HMGA1 NA C6orf106,NUDT3,RPS10-NUDT3,PACSIN1,MNF1,ANKS1A,SPDEF,HMGA1,IP6K3,MLN,LEMD2,GRM4,UHRF1BP1,TAF11,SNRPC,C6orf1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 HMGA1 53148 922 chr6 34191310 34192705 34191836 Y C6orf1,HMGA1 HMGA1,C6orf1 RPS10-NUDT3,NUDT3,C6orf1 MCF7 ChIA-PET 22265404 HMGA1 11872 923 chr6 37039362 37041169 37040220 N NA NA PPIL1,C6orf89,CPNE5,PIM1,FGD2,TBC1D22B,TMEM217 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FGD2 65939 924 chr6 37470912 37472481 37471929 N NA CCDC167 CCDC167,FTSJD2,MDGA1,RNF8,MIR4462,BTBD9 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 CCDC167 3212 925 chr6 37482823 37486087 37484415 Y NA CCDC167 CCDC167,MDGA1,RNF8,FTSJD2,TBC1D22B,MIR4462,ZFAND3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CCDC167 15123 926 chr6 41502064 41507202 41506591 Y NFYA,TREML4,TREM1,TFEB FOXP4 NA NA NA NA FOXP4 6962 927 chr6 41591636 41596244 41594211 N NA NA NCR2,FOXP4,MDFI,TFEB,PGC IMR90 Hi-C 24141950 FOXP4 77472 928 chr6 41601457 41603588 41602518 N NA NA FOXP4,MDFI,NCR2,TFEB IMR90,HELA Hi-C,5C 24141950,22955621 FOXP4 87293 929 chr6 42750010 42757956 42751096 N NA TBCC,KIAA0240 KIAA0240,UBR2,PRPH2,TBCC,ATP6V0CP3,C6orf226,RPL7L1,PTCRA IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 KIAA0240 30838 930 chr6 43357224 43359960 43358423 N NA ZNF318,ABCC10 TJAP1,TTBK1,DLK2,POLH,SLC22A7,ABCC10,CRIP3,CUL9,ZNF318,XPO5,C6orf108,LRRC73,YIPF3,POLR1C IMR90 Hi-C 24141950 ZNF318 20043 931 chr6 44026116 44027766 44026965 Y NFKBIE,MAD2L1BP NA RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223,XPO5 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 C6orf223 57779 932 chr6 44040414 44042151 44041175 N NA NA POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,MRPS18A,HSP90AB1,XPO5,C6orf223,CAPN11,TMEM63B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL14 53040 933 chr6 44047788 44049086 44048489 N NA MRPL14,TMEM63B POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,XPO5,MRPS18A,C6orf223,CAPN11,TMEM63B IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 MRPL14 46105 934 chr6 52160806 52163293 52161636 N NA MCM3 TMEM14A,PAQR8 IMR90 Hi-C 24141950 MCM3 11224 935 chr6 53223183 53225315 53224275 Y NA ELOVL5 ELOVL5 K562 ChIA-PET 22265404 ELOVL5 9206 936 chr6 53412253 53413753 53412941 Y GCLC GCLC NA NA NA NA GCLC 2326 937 chr6 5830748 5833592 5831850 N NA NA LY86-AS1 IMR90 Hi-C 24141950 FARS2 569164 938 chr6 64345104 64347458 64346188 N NA PHF3 PHF3,EYS,PTP4A1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 PHF3 8973 939 chr6 6683452 6688314 6685715,6687383 N,Y NA;NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 LY86 94518 940 chr6 6699495 6701846 6700480 N NA NA RREB1,SSR1,SNRNP48 IMR90 Hi-C 24141950 LY86 110561 941 chr6 6711882 6714541 6713381 Y LY86,RREB1,RREB1 NA RREB1 IMR90 Hi-C 24141950 LY86 122948 942 chr6 6747981 6750943 6750385 Y LY86,RREB1,RREB1 NA RREB1,SSR1,RIOK1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LY86 159047 943 chr6 68587028 68601201 68591380,68598631 N,N NA;NA NA NA NA NA NA LMBRD1 1905848 944 chr6 68604453 68608040 68605543 N NA NA NA NA NA NA LMBRD1 1899009 945 chr6 6884853 6887488 6886146 N NA NA RREB1 IMR90 Hi-C 24141950 RREB1 220342 946 chr6 6927700 6928713 6928213 Y RREB1,RREB1 NA NA NA NA NA RREB1 179117 947 chr6 7087084 7089226 7088078 N NA RREB1 NA NA NA NA RREB1 18604 948 chr6 710616 711960 711183 Y DUSP22,EXOC2 EXOC2 NA NA NA NA EXOC2 17507 949 chr6 82650224 82652143 82651103 Y FAM46A NA BCKDHB IMR90 Hi-C 24141950 FAM46A 187796 950 chr6 86574996 86576837 86576279 N NA NA NA NA NA NA SNHG5 186545 951 chr6 87861072 87862620 87861925 N NA ZNF292 NA NA NA NA ZNF292 2649 952 chr6 89744077 89745969 89744999 Y UBE2J1,PNRC1 PNRC1 PNRC1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 PNRC1 44460 953 chr6 89782136 89783837 89782982 N NA PNRC1 NA NA NA NA PNRC1 6592 954 chr6 95966430 95968205 95967083 N NA NA NA NA NA NA MANEA 57168 955 chr6 96017826 96020856 96020186 N NA MANEA MANEA K562 ChIA-PET 22265404 MANEA 4517 956 chr7 100894574 100896620 100895605 N NA ZNHIT1,PLOD3,CLDN15,FIS1 NA NA NA NA FIS1 6203 957 chr7 101360349 101362484 101361476 Y CUX1,CUX1 NA CUX1,EMID2,SH2B2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 96700 958 chr7 101383586 101388022 101384388,101387178 Y,N NA;NA NA CUX1,EMID2,SH2B2 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 CUX1 71162 959 chr7 104583244 104587090 104585709,104584120 Y,N MLL5;NA LOC100216546 LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 LOC100216546 44522 960 chr7 106063786 106066733 106065591 Y NA NA NAMPT,CCDC71L,CDHR3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NAMPT 138148 961 chr7 106398027 106398715 106398517 N NA NA CCDC71L,PIK3CG,PRKAR2B,HBP1 IMR90 Hi-C 24141950 CCDC71L 96393 962 chr7 106451900 106453485 106452569 Y NA NA PIK3CG,PRKAR2B IMR90 Hi-C 24141950 PIK3CG 52439 963 chr7 10682580 10684209 10683391 N NA NA NA NA NA NA NDUFA4 295604 964 chr7 115784811 115786333 115785490 N NA NA MET IMR90 Hi-C 24141950 TES 64214 965 chr7 116222400 116224331 116223531 N NA NA TES,MET,CAV2,CAV1 GM12878,H1ESC,IMR90 5C,Hi-C 22955621,24141950 CAV1 57561 966 chr7 119692491 119694106 119693074 Y NA NA NA NA NA NA ING3 896711 967 chr7 119699722 119701128 119700739 N NA NA NA NA NA NA ING3 889689 968 chr7 1208904 1210092 1209670 N NA C7orf50,ZFAND2A ZFAND2A,C7orf50,CYP2W1 K562,IMR90,MCF7 ChIA-PET,Hi-C 22265404,24141950 ZFAND2A 9049 969 chr7 1230843 1232687 1232038 N NA ZFAND2A C7orf50,ZFAND2A,MICALL2 IMR90 Hi-C 24141950 ZFAND2A 30988 970 chr7 12754808 12756836 12755480 Y VWDE,ARL4A ARL4A NA NA NA NA ARL4A 28356 971 chr7 127761248 127765362 127761932 N NA NA SND1,MIR129-1 IMR90 Hi-C 24141950 MGC27345 182454 972 chr7 128571139 128574065 128573393 Y NA IRF5 IRF5 MCF7 ChIA-PET 22265404 IRF5 3929 973 chr7 135664476 135666354 135665622 Y NA MTPN NA NA NA NA MTPN 2272 974 chr7 13869263 13870779 13870227 N NA NA ETV1 IMR90 Hi-C 24141950 ARL4A 1142811 975 chr7 142246305 142248163 142247402 N NA NA EPHB6 IMR90 Hi-C 24141950 TAS2R38 572732 976 chr7 142424337 142426490 142425113 N NA NA TRY6 IMR90 Hi-C 24141950 GSTK1 534032 977 chr7 148637677 148639234 148638469 Y NA NA EZH2,ZNF786,ZNF398,ZNF425,CUL1 K562,MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 EZH2 56236 978 chr7 154996027 154999639 154997152,154998304 N,N NA;NA NA INSIG1,LOC202781,PAXIP1 K562 ChIA-PET 22265404 INSIG1 89847 979 chr7 155143417 155158785 155151337,155153891,155157637 N,N,N NA;NA;NA NA INSIG1,LOC100128264,HTR5A,PAXIP1,LOC100132707,LOC202781,CNPY1 IMR90 Hi-C 24141950 INSIG1 53931 980 chr7 155382353 155385089 155383576 N NA NA LMBR1,CNPY1,RBM33,LOC100132707 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 RBM33 52114 981 chr7 157094105 157095959 157095073 N NA DNAJB6 UBE3C,DNAJB6 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 33752 982 chr7 157110648 157111643 157111199 Y NA DNAJB6 UBE3C,DNAJB6 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DNAJB6 18068 983 chr7 17312098 17316365 17313298,17314343,17315956 N,Y,Y NA;AHR;NA AHR AHR IMR90 Hi-C 24141950 AHR 21911 984 chr7 17555876 17562034 17561358 N NA NA AHR IMR90 Hi-C 24141950 AHR 217600 985 chr7 17592001 17595899 17594490 N NA NA NA NA NA NA AHR 253725 986 chr7 25493380 25495198 25494263 N NA NA NA NA NA NA C7orf31 273563 987 chr7 25653165 25660854 25659980,25653704 Y,N NA;NA NA LOC441204 IMR90 Hi-C 24141950 C7orf31 433348 988 chr7 25894089 25898162 25895873,25896801 N,Y NA;NA NA HOXA9,HOXA10-HOXA9,SKAP2,NFE2L3,HNRNPA2B1,CBX3,HOTAIRM1,HOXA3,HOXA2,HOXA1,HOXA5,HOXA6,HOXA7,HOXA4,HOXA-AS3,EVX1,HOXA11,HOXA-AS5,SNX10 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 NFE2L3 293685 989 chr7 26137163 26138611 26137613 N NA NA NA NA NA NA NFE2L3 53236 990 chr7 26140472 26141955 26141234 Y SNX10,SNX10,SNX10,HNRNPA2B1 NFE2L3 NA NA NA NA NFE2L3 49892 991 chr7 26437237 26439707 26438409 N NA NA LOC441204 MCF7,K562 ChIA-PET 22265404 SNX10 105722 992 chr7 3134063 3135319 3134698 N NA NA SDK1,CARD11 IMR90 Hi-C 24141950 GNA12 250104 993 chr7 38343855 38345553 38344674 N NA LOC100506776 LOC100506776 IMR90 Hi-C 24141950 LOC100506776 35625 994 chr7 38356109 38358559 38357556 N NA LOC100506776 STARD3NL IMR90 Hi-C 24141950 LOC100506776 22619 995 chr7 38374777 38375778 38375283 N NA LOC100506776 LOC100506776 K562 ChIA-PET 22265404 LOC100506776 5400 996 chr7 401634 403702 402590 N NA LOC442497 NA NA NA NA LOC442497 15689 997 chr7 405082 407433 406292 N NA LOC442497 NA NA NA NA LOC442497 11958 998 chr7 41853890 41858113 41856517 N NA NA LOC285954,C7orf10 IMR90 Hi-C 24141950 INHBA 111184 999 chr7 41862920 41865460 41864124 N NA NA LOC285954,C7orf10 IMR90 Hi-C 24141950 INHBA 120214 1000 chr7 41918886 41923573 41921467,41922154 Y,N INHBA;NA NA LOC285954,C7orf10,INHBA IMR90 Hi-C 24141950 INHBA 176180 1001 chr7 41925061 41928355 41926069 Y INHBA NA LOC285954,C7orf10,INHBA IMR90 Hi-C 24141950 INHBA 182355 1002 chr7 47686553 47687508 47687048 N NA NA TNS3,PKD1L1,LINC00525,C7orf69 IMR90 Hi-C 24141950 TNS3 64811 1003 chr7 50241167 50245602 50244277 N NA NA COBL,IKZF1 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 IKZF1 98776 1004 chr7 50251023 50254295 50252794 N NA NA NA NA NA NA IKZF1 90083 1005 chr7 50320332 50325803 50322833 N NA IKZF1 NA NA NA NA IKZF1 18575 1006 chr7 5594746 5597072 5595918 Y CCZ1,ACTB FBXL18,ACTB,FSCN1 RNF216,FBXL18,TNRC18 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ACTB 24514 1007 chr7 55953910 55955929 55955233 N NA ZNF713 NA NA NA NA ZNF713 24402 1008 chr7 5608949 5610278 5609517 N NA ACTB,FSCN1 RNF216,FSCN1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 FSCN1 22158 1009 chr7 6120393 6121898 6121156 N NA EIF2AK1,USP42 EIF2AK1,USP42 K562,MCF7 ChIA-PET 22265404 EIF2AK1 21533 1010 chr7 64457855 64460710 64459417 N NA ZNF117,CCT6P3 ZNF117 K562 ChIA-PET 22265404 ZNF117 6441 1011 chr7 65957550 65959073 65958648 N NA NA LINC00174,TPST1 IMR90 Hi-C 24141950 LOC493754 84425 1012 chr7 66056507 66057824 66057339 N NA LOC493754,KCTD7 KCTD7 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC493754 13009 1013 chr7 66146444 66148140 66147051 N NA NA KCTD7,LOC493754,RABGEF1 IMR90 Hi-C 24141950 KCTD7 52576 1014 chr7 6769006 6770112 6769429 N NA ZNF12,PMS2CL ZNF12 K562 ChIA-PET 22265404 PMS2CL 4824 1015 chr7 7196335 7198146 7196997 N NA C1GALT1 COL28A1 IMR90 Hi-C 24141950 C1GALT1 24100 1016 chr7 73686100 73687317 73686708 N NA RFC2,CLIP2 RFC2,LAT2,CLIP2 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 CLIP2 16488 1017 chr7 75795234 75796718 75795931 Y RHBDD2,POR NA SRRM3,HSPB1,MDH2,STYXL1 IMR90 Hi-C 24141950 MDH2 117841 1018 chr7 75993270 75994478 75993852 Y NA YWHAG,ZP3 YWHAG MCF7 ChIA-PET 22265404 YWHAG 4928 1019 chr7 7983046 7985118 7984459 Y GLCCI1 GLCCI1 RPA3,LOC729852 IMR90 Hi-C 24141950 GLCCI1 23256 1020 chr7 81475014 81476716 81475695 N NA NA NA NA NA NA SEMA3A 2347501 1021 chr7 90224853 90226945 90226043 N NA NA CDK14,MTERF,FZD1,STEAP2,C7orf63 IMR90,H1ESC,HELA,GM12878,K562 Hi-C,5C 24141950,22955621 GTPBP10 248874 1022 chr7 92643246 92648055 92646077 N NA NA CDK6,FAM133B IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SAMD9 99281 1023 chr7 95236911 95240915 95238616 N NA NA NA NA NA NA PON2 172527 1024 chr8 101346270 101350010 101348245 N NA RNF19A NA NA NA NA RNF19A 23943 1025 chr8 101449849 101451319 101450415 Y RNF19A NA SPAG1 IMR90 Hi-C 24141950 ANKRD46 120693 1026 chr8 102137746 102139668 102138927 N NA NA YWHAZ,FLJ42969,ZNF706,PABPC1 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZNF706 78292 1027 chr8 103595630 103596638 103595859 N NA NA UBR5,KLF10 K562,MCF7 ChIA-PET 22265404 KLF10 71345 1028 chr8 103612195 103614133 103613311 Y KLF10,KLF10 NA UBR5,KLF10,ODF1,AZIN1,RRM2B IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF10 53850 1029 chr8 103806634 103808161 103807709 N NA NA KLF10,UBR5,ODF1 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 AZIN1 68236 1030 chr8 11734845 11736264 11735457 Y CTSB CTSB CTSB,BLK,FDFT1,FAM167A,GATA4 IMR90 Hi-C 24141950 CTSB 9199 1031 chr8 125208052 125209863 125208367 N NA NA TMEM65,FAM91A1,FER1L6,FER1L6-AS1 IMR90 Hi-C 24141950 TMEM65 175077 1032 chr8 125762525 125765217 125763855 N NA NA MTSS1,ZNF572,NDUFB9,TATDN1,LOC157381,SQLE IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NDUFB9 211182 1033 chr8 125826951 125828151 125827651 N NA NA MTSS1,ZNF572,SQLE,LOC157381,NDUFB9,TATDN1,NSMCE2,KIAA0196 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 SQLE 182569 1034 chr8 126517305 126519021 126518205 N NA NA KIAA0196,NSMCE2,TRIB1 IMR90 Hi-C 24141950 TRIB1 74742 1035 chr8 130452809 130464634 130461645,130458353 N,N NA;NA NA MYC MCF7 ChIA-PET 22265404 LOC728724 199323 1036 chr8 130546733 130549499 130548622 N NA NA PVT1,MYC IMR90 Hi-C 24141950 LOC728724 293247 1037 chr8 130565459 130573465 130567094 Y FAM49B NA NA NA NA NA LOC728724 311973 1038 chr8 130590162 130607097 130605939,130594286 Y,Y FAM49B;FAM49B NA NA NA NA NA LOC728724 336676 1039 chr8 130672798 130680450 130678588 Y FAM49B NA PVT1 IMR90 Hi-C 24141950 FAM49B 348447 1040 chr8 130689870 130709500 130695907 N NA NA PVT1,MYC IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 FAM49B 319397 1041 chr8 135843459 135845322 135844742 N NA NA ZFAT,MIR30D,MIR30B IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 ZFAT 118167 1042 chr8 136080709 136081709 136081078 N NA NA NA NA NA NA ZFAT 355417 1043 chr8 142094288 142097751 142096587 Y EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 40969 1044 chr8 142098397 142101144 142099738 Y EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 37576 1045 chr8 142105160 142106516 142105765 Y EIF2C2,SLC45A4,PTP4A3,DENND3 DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 32204 1046 chr8 142113801 142115572 142115006 N NA DENND3 PTK2,DENND3 IMR90 Hi-C 24141950 DENND3 23148 1047 chr8 142128807 142132167 142129746,142131574 Y,Y EIF2C2,SLC45A4,DENND3;EIF2C2,SLC45A4,DENND3 DENND3 PTK2,DENND3,SLC45A4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DENND3 6553 1048 chr8 142274165 142277634 142276276 N NA SLC45A4 PTK2,DENND3,SLC45A4 IMR90 Hi-C 24141950 SLC45A4 35492 1049 chr8 144272182 144274166 144273027 Y NA NA NA NA NA NA ZFP41 54943 1050 chr8 1693048 1694362 1693318 Y CLN8 CLN8 ARHGEF10,CLN8,MIR596,KBTBD11,ZNF596 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 CLN8 17508 1051 chr8 18952511 18954459 18953576 Y NA NA LOC100128993,CSGALNACT1,INTS10,PSD3,SH2D4A IMR90 Hi-C 24141950 PSD3 81315 1052 chr8 20160935 20162417 20161523 N NA LZTS1 ATP6V1B2,LZTS1 IMR90 Hi-C 24141950 LZTS1 48132 1053 chr8 20896073 20898167 20897035 N NA NA NA NA NA NA LZTS1 783270 1054 chr8 22830668 22832413 22831881 N NA NA BIN3,PEBP4,LOC254896,TNFRSF10B,RHOBTB2,C8orf58,KIAA1967 IMR90 Hi-C 24141950 LOC286059 93329 1055 chr8 23355052 23356312 23355884 N NA ENTPD4,SLC25A37 SLC25A37 IMR90 Hi-C 24141950 SLC25A37 30051 1056 chr8 2584412 2587181 2585324 N NA NA NA NA NA NA KBTBD11 662368 1057 chr8 2589845 2592248 2590074,2591350 N,Y NA;NA NA NA NA NA NA KBTBD11 667801 1058 chr8 29229069 29232099 29230703 N NA DUSP4 C8orf75,LOC286135,MIR3148,MIR548O2,TMEM66,LEPROTL1,DUSP4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 20802 1059 chr8 29347228 29349006 29348140 Y KIF13B,DUSP4,DUSP4 NA C8orf75,LOC286135,MIR3148,DUSP4,MIR548O2,TMEM66 IMR90 Hi-C 24141950 DUSP4 138961 1060 chr8 29355527 29357551 29356782 N NA NA LOC286135,C8orf75,MIR3148,MIR548O2,TMEM66,DUSP4 IMR90 Hi-C 24141950 DUSP4 147260 1061 chr8 29386399 29389360 29387455 N NA NA DUSP4,LOC286135 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 DUSP4 178132 1062 chr8 37258962 37260049 37259431 N NA NA KCNU1,ZNF703,LOC728024,ERLIN2 IMR90 Hi-C 24141950 ZNF703 293252 1063 chr8 38523267 38524698 38524131 N NA NA C8orf86,FGFR1,WHSC1L1,RNF5P1,PPAPDC1B IMR90 Hi-C 24141950 PLEKHA2 234055 1064 chr8 42473382 42474462 42474083 N NA NA CHRNB3,SLC20A2,CHRNA6,VDAC3,C8orf40 IMR90 Hi-C 24141950 SLC20A2 76314 1065 chr8 52874137 52875825 52874536 N NA NA NA NA NA NA PCMTD1 62402 1066 chr8 61821547 61826275 61824318,61822048 Y,N CHD7;NA NA CHD7 IMR90 Hi-C 24141950 RAB2A 392078 1067 chr8 61827402 61829899 61829220 Y CHD7 NA NA NA NA NA RAB2A 397933 1068 chr8 61838583 61841047 61839608 N NA NA NA NA NA NA RAB2A 409114 1069 chr8 61883801 61884909 61884391 N NA NA NA NA NA NA RAB2A 454332 1070 chr8 61910139 61913574 61911272 N NA NA CHD7 IMR90 Hi-C 24141950 RAB2A 480670 1071 chr8 66859809 66865422 66862417 Y PDE7A NA PDE7A MCF7 ChIA-PET 22265404 DNAJC5B 68369 1072 chr8 66892999 66896873 66893955 Y PDE7A DNAJC5B DNAJC5B IMR90 Hi-C 24141950 DNAJC5B 36918 1073 chr8 71435636 71436763 71436416 N NA NA NCOA2,PRDM14 IMR90 Hi-C 24141950 TRAM1 83931 1074 chr8 82042515 82043421 82042905 Y PAG1 PAG1 PAG1 IMR90 Hi-C 24141950 PAG1 18212 1075 chr8 8242960 8244587 8243611 N NA SGK223 NA NA NA NA SGK223 3703 1076 chr9 103188713 103190482 103189427 N NA NA C9orf30-TMEFF1,NR4A3 IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 TEX10 73454 1077 chr9 107730248 107731582 107730668 Y SLC44A1,FSD1L,FSD1L,ABCA1 NA ABCA1 IMR90 Hi-C 24141950 NIPSNAP3A 220279 1078 chr9 107752284 107754800 107754034 N NA NA ABCA1,SLC44A1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 NIPSNAP3A 242315 1079 chr9 107826237 107827958 107826583 N NA NA ABCA1,SLC44A1 IMR90 Hi-C 24141950 SLC44A1 178971 1080 chr9 109974899 109976485 109975989 Y KLF4 NA NA NA NA NA RAD23B 69032 1081 chr9 110399499 110401097 110400113 N NA NA KLF4 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 KLF4 147452 1082 chr9 113365899 113367506 113366701 N NA NA LPAR1,OR2K2,C9orf152,MUSK,SVEP1,KIAA0368 IMR90 Hi-C 24141950 TXN 346979 1083 chr9 116501414 116504945 116504795 N NA NA COL27A1,ORM1,ZNF618,WDR31,RGS3,AMBP,KIF12,AKNA IMR90 Hi-C 24141950 ZNF618 133617 1084 chr9 117275320 117276757 117275910 N NA NA DFNB31,ATP6V1G1,C9orf91 K562,IMR90 ChIA-PET,Hi-C 22265404,24141950 ATP6V1G1 73237 1085 chr9 123834113 123838308 123836769,123834416 N,N NA;NA CNTRL CNTRL,TRAF1,MEGF9,FBXW2,C5,RAB14 IMR90,MCF7,K562 Hi-C,ChIA-PET 24141950,22265404 CNTRL 12266 1086 chr9 123995777 123997318 123996676 N NA RAB14,GSN GGTA1P,GSN,STOM,CNTRL,RAB14 IMR90 Hi-C 24141950 RAB14 31412 1087 chr9 126959194 126960412 126959912 Y DENND1A NA DENND1A,NEK6 IMR90 Hi-C 24141950 NEK6 59473 1088 chr9 127004445 127005871 127005164 N NA NEK6 NEK6,DENND1A IMR90 Hi-C 24141950 NEK6 14014 1089 chr9 129484458 129485309 129484912 Y NA NA NA NA NA NA ZBTB43 81976 1090 chr9 129508020 129508791 129508422 N NA NA NA NA NA NA ZBTB43 58494 1091 chr9 132220498 132222246 132220580 Y FAM73B,USP20,USP20,C9orf78,ASB6 LOC100506190 PPP2R4,CRAT,ASB6,METTL11A,IER5L,C9orf106,C9orf50,LOC100506190 IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 LOC100506190 28693 1092 chr9 134247621 134249302 134248896 Y AIF1L,POMT1,PRRC2B NA PRRC2B,NUP214,FAM78A IMR90 Hi-C 24141950 PRRC2B 56175 1093 chr9 19229858 19232423 19230797 N NA NA DENND4C IMR90 Hi-C 24141950 DENND4C 58326 1094 chr9 36765422 36766877 36766156 Y RNF38,RNF38 NA MELK IMR90 Hi-C 24141950 MELK 192563 1095 chr9 66454541 66459407 66457935 N NA NA NA NA NA NA FXN 5191072 1096 chr9 6680381 6682739 6681141 Y UHRF2,KDM4C NA KDM4C,UHRF2,GLDC K562,MCF7 ChIA-PET 22265404 KDM4C 74902 1097 chr9 73033151 73036963 73034494 Y SMC5,KLF9 KLF9 TRPM3,SMC5,LOC100507299,KLF9 MCF7,IMR90 ChIA-PET,Hi-C 22265404,24141950 KLF9 3578 1098 chr9 76733743 76737322 76735645 N NA NA NA NA NA NA RORB 374930 1099 chr9 91392062 91393751 91392988 Y NA NA SHC3,MIR4289,LOC286238,S1PR3,NXNL2,CKS2 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 S1PR3 212611 1100 chr9 92111384 92115160 92113705 N NA SEMA4D SEMA4D IMR90 Hi-C 24141950 SEMA4D 16773 1101 chr9 92136716 92137983 92137474 Y SECISBP2 SEMA4D SEMA4D,SECISBP2 IMR90 Hi-C 24141950 SEMA4D 42105 1102 chr9 92139948 92141523 92140744 Y NA SEMA4D SEMA4D,SECISBP2 IMR90 Hi-C 24141950 SEMA4D 45337 1103 chrM 2119 16570 16559,3807 N,N NA;NA NA NA NA NA NA NA -1 1104 chrX 102238864 102261300 102240260,102247591 N,N NA;NA RAB40AL NXF3 IMR90 Hi-C 24141950 RAB40AL 46664 1105 chrX 106927561 106929823 106928368 Y NA NA NA NA NA NA PRPS1 55907 1106 chrX 119619102 119620645 119619920 N NA LAMP2 LAMP2 K562 ChIA-PET 22265404 LAMP2 15898 1107 chrX 122898652 122899836 122899028 Y NA THOC2 NA NA NA NA THOC2 31748 1108 chrX 123350805 123353363 123351535 Y SH2D1A NA NA NA NA NA STAG2 256330 1109 chrX 129090326 129092181 129091342 N NA BCORL1 UTP14A K562 ChIA-PET 22265404 BCORL1 46983 1110 chrX 129094922 129096156 129095427 N NA BCORL1 UTP14A K562 ChIA-PET 22265404 BCORL1 43008 1111 chrX 129115680 129117136 129116495 N NA BCORL1 BCORL1,UTP14A IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 BCORL1 22028 1112 chrX 12967942 12970809 12969091 Y TMSB4X,TLR7,TLR8 TMSB4X NA NA NA NA TMSB4X 22417 1113 chrX 13107394 13112116 13108973 Y TLR8,TMSB4X NA TMSB4X MCF7 ChIA-PET 22265404 TMSB4X 114168 1114 chrX 134645954 134647585 134646864 N NA DDX26B DDX26B K562,MCF7 ChIA-PET 22265404 DDX26B 6970 1115 chrX 135990839 135993406 135991906 N NA RBMX RBMX K562,MCF7 ChIA-PET 22265404 RBMX 27900 1116 chrX 139013260 139016500 139015221,139013517 N,N NA;NA NA MIR505,ATP11C MCF7 ChIA-PET 22265404 ATP11C 98813 1117 chrX 147461486 147463790 147462881 N NA NA NA NA NA NA AFF2 118349 1118 chrX 149714415 149716382 149715438 N NA MTM1 MAMLD1,MTM1 IMR90,MCF7 Hi-C,ChIA-PET 24141950,22265404 MTM1 20665 1119 chrX 16900252 16901634 16900951 Y TXLNG RBBP7 RBBP7,TXLNG MCF7,IMR90,K562 ChIA-PET,Hi-C 22265404,24141950 RBBP7 11718 1120 chrX 39631071 39632806 39631962 N NA NA NA NA NA NA BCOR 403776 1121 chrX 39713497 39715289 39714619 Y BCOR NA BCOR IMR90 Hi-C 24141950 BCOR 321293 1122 chrX 39794678 39797983 39796028 N NA NA BCOR IMR90 Hi-C 24141950 BCOR 238599 1123 chrX 39871937 39874922 39873402 Y NA NA BCOR MCF7,K562 ChIA-PET 22265404 BCOR 161660 1124 chrX 40868919 40870296 40869568 Y USP9X,ATP6AP2,CXorf38,MED14 NA MED14,USP9X IMR90,K562 Hi-C,ChIA-PET 24141950,22265404 USP9X 74592 1125 chrX 45623875 45631438 45629799,45630432 N,N NA;NA NA MIR222,MIR221 IMR90 Hi-C 24141950 KDM6A 891452 1126 chrX 48534113 48535731 48534887 N NA WAS,SUV39H1 NA NA NA NA WAS 6455 1127 chrX 53740262 53743694 53741890,53743520 Y,N KDM5C,SMC1A,HUWE1,PHF8;NA HUWE1 HUWE1 MCF7 ChIA-PET 22265404 HUWE1 26589 1128 chrX 65294492 65295942 65295115 Y MSN NA NA NA NA NA MSN 406981 1129 chrX 78401096 78405892 78402464 Y P2RY10,GPR174 GPR174 NA NA NA NA GPR174 20577 1130 chrX 9308253 9309764 9308953 N NA NA TBL1X IMR90,K562,MCF7 Hi-C,ChIA-PET 24141950,22265404 TBL1X 121571